메뉴 건너뛰기




Volumn 149, Issue 8, 2003, Pages 2107-2117

Phenotypic characterization of overexpression or deletion of the Escherichia coli crcA, cspE and crcB genes

Author keywords

[No Author keywords available]

Indexed keywords

CAMPHOR; COLD SHOCK PROTEIN; DNA TOPOISOMERASE (ATP HYDROLYSING); DNA TOPOISOMERASE IV; ESCHERICHIA COLI PROTEIN; NALIDIXIC ACID;

EID: 0042925627     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/mic.0.26363-0     Document Type: Review
Times cited : (26)

References (46)
  • 1
    • 0026712869 scopus 로고
    • The role of topoisomerase IV in partitioning bacterial replicons and the structure of catenated intermediates in DNA replication
    • Adams, D. E., Shekhtman, E. M., Zechiedrich, L., Schmid, M. B. & Cozzarelli, N. (1992). The role of topoisomerase IV in partitioning bacterial replicons and the structure of catenated intermediates in DNA replication. Cell 71, 277-288.
    • (1992) Cell , vol.71 , pp. 277-288
    • Adams, D.E.1    Shekhtman, E.M.2    Zechiedrich, L.3    Schmid, M.B.4    Cozzarelli, N.5
  • 2
    • 0030972952 scopus 로고    scopus 로고
    • H-NS: A modulator of environmentally regulated gene expression
    • Atlung, T. & Ingmer, H. (1997). H-NS: a modulator of environmentally regulated gene expression. Mol Microbiol 24, 7-17.
    • (1997) Mol. Microbiol. , vol.24 , pp. 7-17
    • Atlung, T.1    Ingmer, H.2
  • 3
    • 0032983824 scopus 로고    scopus 로고
    • Characterization of Escherichia coli cspE, whose product negatively regulates transcription of cspA, the gene for the major cold shock protein
    • Bae, W., Phadtare, S., Severinov, K. & Inouye, M. (1999). Characterization of Escherichia coli cspE, whose product negatively regulates transcription of cspA, the gene for the major cold shock protein. Mol Microbiol 31, 1429-1441.
    • (1999) Mol. Microbiol. , vol.31 , pp. 1429-1441
    • Bae, W.1    Phadtare, S.2    Severinov, K.3    Inouye, M.4
  • 4
    • 0034608861 scopus 로고    scopus 로고
    • Escherichia coli CspA-family RNA chaperones are transcription antiterminators
    • Bae, W., Xia, B., Inouye, M. & Severinov, K. (2000). Escherichia coli CspA-family RNA chaperones are transcription antiterminators. Proc Natl Acad Sci U S A 97, 7784-7789.
    • (2000) Proc. Natl. Acad. Sci. U S A , vol.97 , pp. 7784-7789
    • Bae, W.1    Xia, B.2    Inouye, M.3    Severinov, K.4
  • 5
    • 0034596969 scopus 로고    scopus 로고
    • Transfer of palmitate from phospholipids to lipid A in outer membranes of Gram-negative bacteria
    • Bishop, R., Gibbons, H., Guina, T., Trent, M., Miller, S. & Raetz, C. (2000). Transfer of palmitate from phospholipids to lipid A in outer membranes of Gram-negative bacteria. EMBO J 19, 5071-5080.
    • (2000) EMBO J. , vol.19 , pp. 5071-5080
    • Bishop, R.1    Gibbons, H.2    Guina, T.3    Trent, M.4    Miller, S.5    Raetz, C.6
  • 7
    • 0017129243 scopus 로고
    • Transposition and fusion of the lac genes to selected promoters in Escherichia coli using bacteriophage lambda and Mu
    • Casadaban, M. J. (1976). Transposition and fusion of the lac genes to selected promoters in Escherichia coli using bacteriophage lambda and Mu. J Mol Biol 104, 541-555.
    • (1976) J. Mol. Biol. , vol.104 , pp. 541-555
    • Casadaban, M.J.1
  • 8
    • 0024558335 scopus 로고
    • One-step preparation of competent Escherichia coli: Transformation and storage of bacterial cells in the same solution
    • Chung, C., Niemela, S. & Miller, R. H. (1989). One-step preparation of competent Escherichia coli: transformation and storage of bacterial cells in the same solution. Proc Natl Acad Sci U S A 86, 2172-2175.
    • (1989) Proc. Natl. Acad. Sci. U S A , vol.86 , pp. 2172-2175
    • Chung, C.1    Niemela, S.2    Miller, R.H.3
  • 9
    • 0027258405 scopus 로고
    • Synthesis of the Escherichia coli K-12 nucleoid associated DNA-binding protein H-NS is subjected to growth-phase control and autoregulation
    • Dersch, P., Schmidt, D. & Bremer, E. (1993). Synthesis of the Escherichia coli K-12 nucleoid associated DNA-binding protein H-NS is subjected to growth-phase control and autoregulation. Mol Microbiol 8, 875-889.
    • (1993) Mol. Microbiol. , vol.8 , pp. 875-889
    • Dersch, P.1    Schmidt, D.2    Bremer, E.3
  • 10
    • 0030072541 scopus 로고    scopus 로고
    • Differential thermoregulation of two highly homologous cold-shock genes, cspA and cspB of Escherichia coli
    • Etchegaray, J. P., Jones, P. G. & Inouye, M. (1996). Differential thermoregulation of two highly homologous cold-shock genes, cspA and cspB of Escherichia coli. Genes Cells 1, 171-178.
    • (1996) Genes Cells , vol.1 , pp. 171-178
    • Etchegaray, J.P.1    Jones, P.G.2    Inouye, M.3
  • 11
    • 0029000656 scopus 로고
    • Partition of P1 plasmids in Escherichia coli mukB chromosomal partition mutants
    • Funnell, B. E. & Gagnier, L. (1995). Partition of P1 plasmids in Escherichia coli mukB chromosomal partition mutants. J Bacteriol 177, 2381-2386.
    • (1995) J. Bacteriol. , vol.177 , pp. 2381-2386
    • Funnell, B.E.1    Gagnier, L.2
  • 12
    • 0026572721 scopus 로고
    • An improved chloramphenicol resistance gene cassette for site-directed marker replacement mutagenesis
    • Fuqua, W. C. (1992). An improved chloramphenicol resistance gene cassette for site-directed marker replacement mutagenesis. Biotechniques 12, 223-225.
    • (1992) Biotechniques , vol.12 , pp. 223-225
    • Fuqua, W.C.1
  • 13
    • 0030826392 scopus 로고    scopus 로고
    • A family of cold shock proteins in Bacillus subtilis is essential for cellular growth and for efficient protein synthesis at optimal and low temperatures
    • Graumann, P., Wendrich, T., Weber, M., Schroder, K. & Marahiel, M. (1997). A family of cold shock proteins in Bacillus subtilis is essential for cellular growth and for efficient protein synthesis at optimal and low temperatures. Mol Microbiol 25, 741-756.
    • (1997) Mol. Microbiol. , vol.25 , pp. 741-756
    • Graumann, P.1    Wendrich, T.2    Weber, M.3    Schroder, K.4    Marahiel, M.5
  • 14
    • 0032538292 scopus 로고    scopus 로고
    • Lipid A acetylation and bacterial resistance against vertebrate antimicrobial peptides
    • Guo, L., Lim, K., Poduje, C., Daniel, J., Gunn, J., Hackett, M. & Miller, S. (1998). Lipid A acetylation and bacterial resistance against vertebrate antimicrobial peptides. Cell 95, 189-198.
    • (1998) Cell , vol.95 , pp. 189-198
    • Guo, L.1    Lim, K.2    Poduje, C.3    Daniel, J.4    Gunn, J.5    Hackett, M.6    Miller, S.7
  • 15
    • 0032544629 scopus 로고    scopus 로고
    • Nascent RNA in transcription complexes interacts with CspE, a small protein in E. coli implicated in chromatin condensation
    • Hanna, M. & Liu, K. (1998). Nascent RNA in transcription complexes interacts with CspE, a small protein in E. coli implicated in chromatin condensation. J Mol Biol 282, 227-239.
    • (1998) J. Mol. Biol. , vol.282 , pp. 227-239
    • Hanna, M.1    Liu, K.2
  • 16
    • 0030909659 scopus 로고    scopus 로고
    • Unfolding of the bacterial nucleoid both in vivo and in vitro as a result of exposure to camphor
    • Harrington, E. W. & Trun, N. J. (1997). Unfolding of the bacterial nucleoid both in vivo and in vitro as a result of exposure to camphor. J Bacteriol 179, 2435-2439.
    • (1997) J. Bacteriol. , vol.179 , pp. 2435-2439
    • Harrington, E.W.1    Trun, N.J.2
  • 17
    • 0024603181 scopus 로고
    • Chromosome partitioning in Escherichia coli: Novel mutants producing anucleate cells
    • Hiraga, S., Niki, H., Ogura, T., Ichinose, C., Mori, H., Ezaki, B. & Jaffe, A. (1989). Chromosome partitioning in Escherichia coli: novel mutants producing anucleate cells. J Bacteriol 171, 1496-1505.
    • (1989) J. Bacteriol. , vol.171 , pp. 1496-1505
    • Hiraga, S.1    Niki, H.2    Ogura, T.3    Ichinose, C.4    Mori, H.5    Ezaki, B.6    Jaffe, A.7
  • 18
    • 0029844482 scopus 로고    scopus 로고
    • Overproduction of three genes leads to camphor resistance and chromosome condensation in Escherichia coli
    • Hu, K. H., Liu, E., Dean, K., Gingras, M., DeGraff, W. & Trun, N. J. (1996). Overproduction of three genes leads to camphor resistance and chromosome condensation in Escherichia coli. Genetics 143, 1521-1532.
    • (1996) Genetics , vol.143 , pp. 1521-1532
    • Hu, K.H.1    Liu, E.2    Dean, K.3    Gingras, M.4    DeGraff, W.5    Trun, N.J.6
  • 19
    • 0031015217 scopus 로고    scopus 로고
    • CspA, the major cold-shock protein of Escherichia coli, is an RNA chaperone
    • Jiang, W., Hou, Y. & Inouye, M. (1997). CspA, the major cold-shock protein of Escherichia coli, is an RNA chaperone. J Biol Chem 272, 196-202.
    • (1997) J. Biol. Chem. , vol.272 , pp. 196-202
    • Jiang, W.1    Hou, Y.2    Inouye, M.3
  • 20
    • 0031757173 scopus 로고    scopus 로고
    • HNS and StpA proteins stimulate expression of the maltose regulon in Escherichia coli
    • Johansson, J., Dagberg, B., Richet, E. & Uhlin, B. (1998). HNS and StpA proteins stimulate expression of the maltose regulon in Escherichia coli. J Bacteriol 180, 6117-6125.
    • (1998) J. Bacteriol. , vol.180 , pp. 6117-6125
    • Johansson, J.1    Dagberg, B.2    Richet, E.3    Uhlin, B.4
  • 21
    • 0023752052 scopus 로고
    • The two-component ATP-dependent Clp protease of Escherichia coli. Purification, cloning and mutational analysis of the ATP-binding component
    • Katayama, T., Gottesman, S., Pumphrey, J., Rudikoff, S., Clark, W. & Maurizi, M. R. (1988). The two-component ATP-dependent Clp protease of Escherichia coli. Purification, cloning and mutational analysis of the ATP-binding component. J Biol Chem 263, 15226-15236.
    • (1988) J. Biol. Chem. , vol.263 , pp. 15226-15236
    • Katayama, T.1    Gottesman, S.2    Pumphrey, J.3    Rudikoff, S.4    Clark, W.5    Maurizi, M.R.6
  • 22
    • 0024075832 scopus 로고
    • Gene organization in the region containing a new gene involved in chromosome partitioning in Escherichia coli
    • Kato, J.-L., Nishimura, Y., Yamada, M., Suzuli, H. & Hirota, Y. (1988). Gene organization in the region containing a new gene involved in chromosome partitioning in Escherichia coli. J Bacteriol 170, 3967-3977.
    • (1988) J. Bacteriol. , vol.170 , pp. 3967-3977
    • Kato, J.-L.1    Nishimura, Y.2    Yamada, M.3    Suzuli, H.4    Hirota, Y.5
  • 23
    • 0027071634 scopus 로고
    • Purification and characterization of DNA topoisomerase IV in Escherichia coli
    • Kato, J., Suzuki, H. & Ikeda, H. (1992). Purification and characterization of DNA topoisomerase IV in Escherichia coli. J Biol Chem 267, 25676-25684.
    • (1992) J. Biol. Chem. , vol.267 , pp. 25676-25684
    • Kato, J.1    Suzuki, H.2    Ikeda, H.3
  • 24
    • 0025841773 scopus 로고
    • Uses of transposons with emphasis on Tn10
    • Kleckner, N., Bender, J. & Gottesman, S. (1991). Uses of transposons with emphasis on Tn10. Methods Enzymol 204, 139-151.
    • (1991) Methods Enzymol. , vol.204 , pp. 139-151
    • Kleckner, N.1    Bender, J.2    Gottesman, S.3
  • 25
    • 0031858092 scopus 로고    scopus 로고
    • Escherichia coli strains lacking protein HU are UV sensitive due to a role for HU in homologous recombination
    • Li, S. & Waters, R. (1998). Escherichia coli strains lacking protein HU are UV sensitive due to a role for HU in homologous recombination. J Bacteriol 180, 3750-3756.
    • (1998) J. Bacteriol. , vol.180 , pp. 3750-3756
    • Li, S.1    Waters, R.2
  • 26
    • 0022405836 scopus 로고
    • Insertional mutagenesis of the lon gene in Escherichia coli: Ion is dispensible
    • Maurizi, M. R., Trisler, P. & Gottesman, S. (1985). Insertional mutagenesis of the lon gene in Escherichia coli: lon is dispensible. J Bacteriol 164, 1124-1135.
    • (1985) J. Bacteriol. , vol.164 , pp. 1124-1135
    • Maurizi, M.R.1    Trisler, P.2    Gottesman, S.3
  • 27
    • 0028292346 scopus 로고
    • The Escherichia coli proU promoter element and its contribution to osmotically signaled transcription activation
    • Mellies, J., Brems, R. & Villarejo, M. (1994). The Escherichia coli proU promoter element and its contribution to osmotically signaled transcription activation. J Bacteriol 176, 3638-3645.
    • (1994) J. Bacteriol. , vol.176 , pp. 3638-3645
    • Mellies, J.1    Brems, R.2    Villarejo, M.3
  • 28
    • 0030847091 scopus 로고    scopus 로고
    • Isolation and characterization of spermidine nucleoids from Escherichia coli
    • Murphy, L. & Zimmerman, S. (1997). Isolation and characterization of spermidine nucleoids from Escherichia coli. J. Struct Biol 119, 321-325.
    • (1997) J. Struct. Biol. , vol.119 , pp. 321-325
    • Murphy, L.1    Zimmerman, S.2
  • 29
    • 0029913775 scopus 로고    scopus 로고
    • A novel member of the cspA family of genes that is induced by coldshock in Escherichia coli
    • Nakashima, K., Kanamaru, K., Mizuno, T. & Horikoshi, K. (1996). A novel member of the cspA family of genes that is induced by coldshock in Escherichia coli. J Bacteriol 178, 2994-2997.
    • (1996) J. Bacteriol. , vol.178 , pp. 2994-2997
    • Nakashima, K.1    Kanamaru, K.2    Mizuno, T.3    Horikoshi, K.4
  • 30
    • 0025285536 scopus 로고
    • Bending and supercoiling of DNA at the attachment site of bacteriophage lambda
    • Nash, H. (1990). Bending and supercoiling of DNA at the attachment site of bacteriophage lambda. Trends Biochem Sci 15, 222-227.
    • (1990) Trends Biochem. Sci. , vol.15 , pp. 222-227
    • Nash, H.1
  • 31
    • 0026754366 scopus 로고
    • The chromatin-associated protein H-NS interacts with curved DNA to influence DNA topology and gene expression
    • Owen-Huges, T. A., Pavitt, G. D., Santos, D. S., Sidebotham, J. M., Hulton, C., Hinton, J. & Higgins, C. (1992). The chromatin-associated protein H-NS interacts with curved DNA to influence DNA topology and gene expression. Cell 71, 255-265.
    • (1992) Cell , vol.71 , pp. 255-265
    • Owen-Huges, T.A.1    Pavitt, G.D.2    Santos, D.S.3    Sidebotham, J.M.4    Hulton, C.5    Hinton, J.6    Higgins, C.7
  • 32
    • 0027171678 scopus 로고
    • Decatenation activity of topoisomerase IV during oriC and pBR322 DNA replication in vitro
    • Peng, H. & Marians, K. (1993). Decatenation activity of topoisomerase IV during oriC and pBR322 DNA replication in vitro. Proc Natl Acad Sci U S A 90, 8571-8575.
    • (1993) Proc. Natl. Acad. Sci. U S A , vol.90 , pp. 8571-8575
    • Peng, H.1    Marians, K.2
  • 33
    • 0032858516 scopus 로고    scopus 로고
    • Sequence-selective interactions with RNA by CspB, CspC and CspE, members of the CspA family of Escherichia coli
    • Phadtare, S. & Inouye, M. (2000). Sequence-selective interactions with RNA by CspB, CspC and CspE, members of the CspA family of Escherichia coli. Mol Microbiol 33, 1004-1014.
    • (2000) Mol. Microbiol. , vol.33 , pp. 1004-1014
    • Phadtare, S.1    Inouye, M.2
  • 35
    • 0034652090 scopus 로고    scopus 로고
    • Suppression of chromosome segregation defects of Escherichia coli muk mutants by mutations in topoisomerase I
    • Sawitzke, J. A. & Austin, S. (2000). Suppression of chromosome segregation defects of Escherichia coli muk mutants by mutations in topoisomerase I. Proc Natl Acad Sci U S A 97, 1671-1676.
    • (2000) Proc. Natl. Acad. Sci. U S A , vol.97 , pp. 1671-1676
    • Sawitzke, J.A.1    Austin, S.2
  • 36
    • 0017681846 scopus 로고
    • Use of gene fusions to study outer membrane protein localization in Escherichia coli
    • Silhavy, T., Shuman, H., Beckwith, J. & Schwartz, M. (1977). Use of gene fusions to study outer membrane protein localization in Escherichia coli. Proc Natl Acad, Sci U S A 74, 5411-5415.
    • (1977) Proc. Natl. Acad. Sci. U S A , vol.74 , pp. 5411-5415
    • Silhavy, T.1    Shuman, H.2    Beckwith, J.3    Schwartz, M.4
  • 38
    • 0028957883 scopus 로고
    • A small RNA acts as an antisilencer of the HNS-silenced rcsA gene of Escherichia coli
    • Sledjeski, D. & Gottesman, S. (1995). A small RNA acts as an antisilencer of the HNS-silenced rcsA gene of Escherichia coli. Proc Natl Acad Sci U S A 92, 2003-2007.
    • (1995) Proc. Natl. Acad. Sci. U S A , vol.92 , pp. 2003-2007
    • Sledjeski, D.1    Gottesman, S.2
  • 39
    • 0025602088 scopus 로고
    • On the bacterial cell cycle: Escherichia coli mutants with altered ploidy
    • Trun, N. J. & Gottesman, S. (1990). On the bacterial cell cycle: Escherichia coli mutants with altered ploidy. Genes Dev 4, 2036-2047.
    • (1990) Genes Dev. , vol.4 , pp. 2036-2047
    • Trun, N.J.1    Gottesman, S.2
  • 40
    • 0033027458 scopus 로고    scopus 로고
    • CspI, the ninth member of the CspA family of Escherichia coli, is induced upon cold shock
    • Wang, N., Yamanaka, K. & Inouye, M. (1999). CspI, the ninth member of the CspA family of Escherichia coli, is induced upon cold shock. J Bacteriol 181, 1603-1609.
    • (1999) J. Bacteriol. , vol.181 , pp. 1603-1609
    • Wang, N.1    Yamanaka, K.2    Inouye, M.3
  • 41
    • 0035048662 scopus 로고    scopus 로고
    • Acquirement of cold sensitivity by quadruple deletion of the cspA family and its suppression by PNPase S1 domain in Escherichia coli
    • Xia, B. & Inouye, M. (2001). Acquirement of cold sensitivity by quadruple deletion of the cspA family and its suppression by PNPase S1 domain in Escherichia coli. Mol Microbiol 40, 179-188.
    • (2001) Mol. Microbiol. , vol.40 , pp. 179-188
    • Xia, B.1    Inouye, M.2
  • 42
    • 0030856635 scopus 로고    scopus 로고
    • Growth-phase dependent expression of cspD, encoding a member of the CspA family in Escherichia coli
    • Yamanaka, K. & Inouye, M. (1997). Growth-phase dependent expression of cspD, encoding a member of the CspA family in Escherichia coli. J Bacteriol 179, 5126-5130.
    • (1997) J. Bacteriol. , vol.179 , pp. 5126-5130
    • Yamanaka, K.1    Inouye, M.2
  • 43
    • 0028220659 scopus 로고
    • Multicopy suppressors, mssA and mssB, of an smbA mutation of Escherichia coli
    • Yamanaka, K., Ogura, T., Koonin, E. V., Niki, H. & Hiraga, S. (1994a). Multicopy suppressors, mssA and mssB, of an smbA mutation of Escherichia coli. Mol Gen Genet 243, 9-16.
    • (1994) Mol. Gen. Genet. , vol.243 , pp. 9-16
    • Yamanaka, K.1    Ogura, T.2    Koonin, E.V.3    Niki, H.4    Hiraga, S.5
  • 44
    • 0028236749 scopus 로고
    • Cloning, sequencing, and characterization of multicopy suppressors of a mukB mutation in Escherichia coli
    • Yamanaka, K., Mitani, T., Ogura, T., Niki, H. & Hiraga, S. (1994b). Cloning, sequencing, and characterization of multicopy suppressors of a mukB mutation in Escherichia coli. Mol Microbiol 13, 301-312.
    • (1994) Mol. Microbiol. , vol.13 , pp. 301-312
    • Yamanaka, K.1    Mitani, T.2    Ogura, T.3    Niki, H.4    Hiraga, S.5
  • 45
    • 0028858007 scopus 로고
    • Roles of topoisomerase IV and DNA gyrase in DNA unlinking during replication in Escherichia coli
    • Zechiedrich, L. & Cozzarelli, N. (1995). Roles of topoisomerase IV and DNA gyrase in DNA unlinking during replication in Escherichia coli. Genes Dev 9, 2859-2869.
    • (1995) Genes Dev. , vol.9 , pp. 2859-2869
    • Zechiedrich, L.1    Cozzarelli, N.2
  • 46
    • 0031884182 scopus 로고    scopus 로고
    • Regulation of proteolysis of the stationary-phase sigma factor
    • Zhou, Y.-N. & Gottesman, S. (1998). Regulation of proteolysis of the stationary-phase sigma factor. J Bacteriol 180, 1154-1158.
    • (1998) J. Bacteriol. , vol.180 , pp. 1154-1158
    • Zhou, Y.-N.1    Gottesman, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.