From waste to plastic: Synthesis of poly(3-hydroxypropionate) in: Shimwellia blattae

Applied and Environmental Microbiology

Volumn 79, Issue 12, 2013, Pages 3582-3589

  Heinrich, Daniel ^a   Andreessen, Björn ^a   Madkour, Mohamed H ^b   Al Ghamdi, Mansour A ^b   Shabbaj, Ibrahim I ^b   Steinbüchel, Alexander ^a,b  

^a UNIVERSITY OF MÜNSTER   (Germany)

^b KING ABDULAZIZ UNIVERSITY   (Saudi Arabia)

Author keywords

[No Author keywords available]

Indexed keywords

ALDEHYDE DEHYDROGENASE; BIODIESEL PRODUCTION; CLOSTRIDIUM PROPIONICUM; ENGINEERED STRAINS; FED-BATCH FERMENTATION; POLY(3-HYDROXYPROPIONATE); POLYHYDROXYALKANOATES; TWO-STEP CULTIVATION;

BACTERIA; BIODIESEL; CARBON; CLONING; CYTOLOGY; GLYCEROL; VOLATILE FATTY ACIDS;

CELLS;

1,3 PROPANEDIOL DEHYDROGENASE; 1,3-PROPANEDIOL DEHYDROGENASE; ALCOHOL DEHYDROGENASE; ALDEHYDE DEHYDROGENASE; DRUG DERIVATIVE; GLYCEROL; HYDRACRYLIC ACID; LACTIC ACID; POLYMER;

BIOACCUMULATION; CHEMICAL PROCESS; CLONE; ENZYME ACTIVITY; GENE EXPRESSION; MICROBIAL ACTIVITY; PLASTIC; WASTE MANAGEMENT;

ARTICLE; BIOSYNTHESIS; BIOTECHNOLOGY; CELL ENGINEERING; ENTEROBACTERIACEAE; ENZYMOLOGY; ESCHERICHIA COLI; GENE VECTOR; GENETICS; METABOLISM; METHODOLOGY; PSEUDOMONAS PUTIDA;

ALCOHOL DEHYDROGENASE; ALDEHYDE DEHYDROGENASE; BIOTECHNOLOGY; CELL ENGINEERING; ENTEROBACTERIACEAE; ESCHERICHIA COLI; GENETIC VECTORS; GLYCEROL; LACTIC ACID; POLYMERS; PSEUDOMONAS PUTIDA;

CLOSTRIDIUM PROPIONICUM; CUPRIAVIDUS NECATOR; PSEUDOMONAS PUTIDA;

EID: 84878587739     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.00161-13     Document Type: Article

References (54)

1. Johnson DT, Taconi KA. 2007. The glycerin glut: options for the valueadded conversion of crude glycerol resulting from biodiesel production. Environ. Prog. 26:338 -348.
2. Yazdani SS, Gonzalez R. 2008. Engineering Escherichia coli for the efficient conversion of glycerol to ethanol and co-products. Metab. Eng. 10: 340-351.
3. Anderson AJ, Dawes EA. 1990. Occurrence, metabolism, metabolic rate, and industrial uses of bacterial polyhydroxyalkanoates. Microbiol. Rev. 54:450-472.
4. Steinbüchel A. 2001. Perspectives for biotechnological production and utilization of biopolymers: metabolic engineering of polyhydroxyalkanoate biosynthesis pathways as a successful example. Macromol. Biosci. 1:1-24.
5. Gerngross TU. 1999. Can biotechnology move us toward a sustainable society? Nat. Biotechnol. 17:541-544.
6. Witholt B, Kessler B. 1999. Perspectives of medium chain length poly-(hydroxyalkanoates), a versatile set of bacterial bioplastics. Curr. Opin. Biotechnol. 10:279 -285.
7. Van der Walle GAM, de Koning GJM, Weusthuis RA, Eggink G. 2001. Properties, modifications and applications of biopolyesters. Adv. Biochem. Eng. Biotechnol. 71:263-291.
8. Hiramitsu M, Doi Y. 1993. Microbial synthesis and characterization of poly(3-hydroxybutyrate-co-3-hydroxypropionate). Polymer 34:4782- 4786.
9. Andreessen B, Steinbüchel A. 2010. Biosynthesis and biodegradation of 3-hydroxypropionate-containing polyesters. Appl. Environ. Biotechnol. 76:4919-4925.
10. Inoue Y. 1998. Solid-state structure and properties of bacterial copolyesters. J. Mol. Struct. 441:119 -227.
11. Kang CK, Lee S, Kim JH. 1993. Accumulation of PHA and its copolyesters by Methylobacterium sp. KCTC 0048. Biotechnol. Lett. 15:1017-1020.
12. Nakamura S, Kunioka M, Doi Y. 1991. Biosynthesis and characterization of bacterial poly(3-hydroxybutyrate-co-3-hydroxypropionate). J. Macromol. Sci. A 28:15-24.
13. Wang Y, Inoue Y. 2001. Effect of dissolved oxygen concentration in the fermentation medium on transformation of the carbon sources during the biosynthesis of poly(3-hydroxybutyrate-co-3-hydroxypropionate) by Alcaligenes latus. Int. J. Biol. Macromol. 28:235-243.
14. Valentin HE, Mitsky TA, Mahadeo DA, Tran M, Gruys KJ. 2000. Application of a propionyl coenzyme A synthetase for poly(3-hydroxypropionate-co-3-hydroxybutyrate) accumulation in recombinant Escherichia coli. Appl. Environ. Microbiol. 66:5253-5258.
15. Andreessen B, Lange AB, Robenek H, Steinbüchel A. 2010. Conversion of glycerol to poly(3-hydroxypropionate) in recombinant Escherichia coli. Appl. Environ. Microbiol. 76:622- 626.
16. Baba H, Tanahashi N, Kumagai Y, Doi Y. 1992. Effects of molecular structure on enzymatic degradation of polyesters. J. Chem. Soc. Jpn. 5:527-533.
17. Gresham TL, Jansen JE, Shaver FW. 1948. _-Propiolactone. I. Polymerization reactions. J. Am. Chem. Soc. 70:998 -999.
18. Yamashita M, Takemoto E, Ihara E, Yasuda H. 1996. Organolanthanide-initiated living polymerizations of ε-caprolactone, δ-valerolactone, and -βpropiolactone. Macromolecules 29:1798 -1806.
19. Wang Q, Liu C, Xian M, Zhang Y, Zhao G. 2012. Biosynthetic pathway for poly(3-hydroxypropionate) in recombinant Escherichia coli. J. Microbiol. 50:693- 697.
20. Burgess NR, McDermott SN, Whiting J. 1973. Aerobic bacteria occurring in the hindgut of the cockroach, Blatta orientalis. J. Hyg. (Lond.) 71:1-7.
21. Priest FG, Barker M. 2010. Gram-negative bacteria associated with brewery yeasts: reclassification of Obesumbacterium proteus biogroup 2 as Shimwellia pseudoproteus gen. nov., sp. nov., and transfer of Escherichia blattae to Shimwellia blattae comb. nov. Int. J. Evol. Microbiol. 60:828- 833.
22. Andres S, Wiezer A, Bendfeldt H, Waschkowitz T, Toeche-Mittler C, Daniel R. 2004. Insights into the genome of the enteric bacterium Escherichia blattae: cobalamin (B12) biosynthesis, B12-dependent reactions, and inactivation of the gene region encoding B12-dependent glycerol dehydratase by a new Mu-like prophage. J. Mol. Microbiol. Biotechnol. 8:150- 168.
23. Weinel C, Nelson KE, Tümmler B. 2002. Global features of the Pseudomonas putida KT2440 genome sequence. Environ. Microbiol. 4:809- 818.
24. Zhang L, Shi ZY, Wu Q, Chen GQ. 2009. Microbial production of 4-hydroxybutyrate, poly-4-hydroxybutyrate, and poly(3-hydroxybutyrate-co-4-hydroxybutyrate) by recombinant microorganisms. Appl. Microbiol. Biotechnol. 84:909-916.
25. Cardon BP, Barker HA. 1946. Two new amino-acid-fermenting bacteria, Clostridium propionicum and Diplococcus glycinophilus. J. Bacteriol. 52: 629-634.
26. Schweiger G, Buckel W. 1984. On the dehydration of (R)-lactate in the fermentation of alanine to propionate by Clostridium propionicum. FEBS Lett. 171:79-84.
27. Selmer T, Wilanzheimer A, Hetzel M. 2002. Propionate CoA-transferase from Clostridium propionicum. Cloning of the gene and identification of glutamate 324 at the active site. Eur. J. Biochem. 269:372-380.
28. Rehm BHA, Steinbüchel A. 1999. Biochemical and genetic analysis of PHA synthases and other proteins required for PHA synthesis. Int. J. Biol. Macromol. 25:3-19.
29. Schubert P, Steinbüchel A, Schlegel HG. 1988. Cloning of the Alcaligenes eutrophus genes for synthesis of poly-beta-hydroxybutyric acid (PHB) and synthesis of PHB in Escherichia coli. J. Bacteriol. 170:5837-5847.
30. Sambrook J, Fritsch EF, Maniatis T. 1989. Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
31. Schlegel HG, Kaltwasser H, Gottschalk G. 1961. Ein Submersverfahren zur Kultur wasserstoffoxydierender Bakterien: Wachstumsphysiologische Untersuchungen. Arch. Mikrobiol. 38:209 -222.
32. Kroll J, Steinle A, Reichelt R, Ewering C, Steinbüchel A. 2009. Establishment of a novel anabolism-based addiction system with an artificially introduced mevalonate pathway: complete stabilization of plasmids as universal application in white biotechnology. Metab. Eng. 11:168 -177.
33. Kovach ME, Elzer PH, Hill DS, Robertson GT, Farris MA, Roop RM, 2nd, Peterson KM. 1995. Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. Gene 166:175-176.
34. Overhage J, Priefert H, Rabenhorst J, Steinbüchel A. 1999. Biotransformationof eugenol to vanillin by a mutant of Pseudomonas sp. strain HR199 constructed by disruption of the vanillin dehydrogenase (vdh) gene. Appl. Microbiol. Biotechnol. 52:820-828.
35. Berger E, Ramsay JA, Ramsay C, Chavarie C. 1989. PHB recovery by hypochlorite digestion of non-PHB biomass. Biotechnol. Technol. 3:227- 232.
36. Heinrich D, Madkour MH, Al-Ghamdi MA, Shabbaj II, Steinbüchel A. 2012. Large scale extraction of poly(3-hydroxybutyrate) from Ralstonia eutropha H16 using sodium hypochlorite. AMB Express 2:59.
37. Brandl H, Gross RA, Lenz RW, Fuller RC. 1988. Pseudomonas oleovorans as a source of poly((β-hydroxyalkanoates) for potential applications as biodegradable polyesters. Appl. Environ. Microbiol. 54:1977-1982.
38. Timm A, Byrom D, Steinbüchel A. 1990. Formation of blends of various poly(3-hydroxyalkanoic acids) by a recombinant strain of Pseudomonas oleovorans. Appl. Microbiol. Biotechnol. 33:296 -301.
39. Spiekermann P, Rehm BHA, Kalscheuer R, Baumeister D, Steinbüchel A. 1999. A sensitive viable-colony staining method using Nile red for direct screening of bacteria that accumulate polyhydroxyalcanoic acids and other lipid storage compounds. Arch. Microbiol. 171:73- 80.
40. Daniel R, Boenigk R, Gottschalk G. 1995. Purification of the 1,3-propanediol dehydrogenase from Citrobacter freundii and cloning, sequencing and overexpression of the corresponding gene in Escherichia coli. J. Bacteriol. 177:2151-2156.
41. Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389 -3402.
42. Hiroe A, Tsuge K, Nomura CT, Itaya M, Tsuge T. 2012. Rearrangement of gene order in the phaCAB operon leads to effective production of ultrahigh-molecular-weight poly[(R)-3-hydroxybutyrate] in genetically engineered Escherichia coli. Appl. Environ. Microbiol. 78:3177-3184.
43. Gonzàlez-Pajuelo M, Andrade JC, Vasconcelos I. 2004. Production of 1,3-propanediol by Clostridium butyricum VPI3266 using a synthetic medium and raw glycerol. J. Ind. Microbiol. Biotechnol. 31:442- 446.
44. Mu Y, Ten H, Zhan DJ, Wang W, Xio ZL. 2006. Microbial production of 1,3-propanediol by Klebsiella pneumoniae using crude glycerol from biodiesel preparations. Biotechnol. Lett. 28:1755-1759.
45. Cameron DC, Altaras NE, Hoffmann ML, Straw AJ. 1998. Metabolic engineering of propanediol pathways. Biotechnol. Prog. 14:116 -125.
46. Liu HJ, Zhang DJ, Xu YH, Mu Y, Sun YQ, Xiu ZL. 2007. Microbial production of 1,3-propanediol from glycerol by Klebsiella pneumoniae under micro-aerobic conditions up to a pilot scale. Biotechnol. Lett. 29: 1281-1285.
47. Daniel R, Stuertz K, Gottschalk G. 1995. Biochemical and molecular characterization of the oxidative branch of glycerol utilization by Citrobacter freundii. J. Bacteriol. 177:4392- 4401.
48. Raynaud C, Lee J, Sarçabal P, Croux PC, Meynial-Salles I, Soucaille P. 2011. Molecular characterization of the glycerol-oxidative pathway of Clostridium butyricum VPI 1718. J. Bacteriol. 193:3127-3134.
49. Hahn SK, Chang YK, Lee SY. 1995. Recovery and characterization of poly(3-hydroxybutyric acid) synthesized in Alcaligenes eutrophus and recombinant Escherichia coli. Appl. Environ. Microbiol. 61:34 -39.
50. Sim SJ, Snell KD, Hogan SA, Stubbe J, Rha C, Sinskey AJ. 1997. PHA synthase activity controls molecular weight and polydispersity of polyhydroxybutyrate in vivo. Nat. Biotechnol. 15:63- 67.
51. Kawaguchi Y, Doi Y. 1992. Kinetics and mechanism of synthesis and degradation of poly(3-hydroxybutyrate) in Alcaligenes eutrophus. Macromolecules 25:2324 -2329.
52. Franklin FCH, Bagdasarian M, Bagdasarian MM, Timmis KN. 1981. Molecular and functional analysis of the TOL plasmidpWWOfrom Pseudomonas putida and cloning of genes for the entire regulated aromatic ring meta cleavage pathway. Proc. Natl. Acad. U. S. A. 78:7458 -7462.
53. Wilde E. 1962. Untersuchungen über Wachstum und Speicherstoffsynthese von Hydrogenomonas eutropha. Arch. Mikrobiol. 43:109 -137.
54. Kovach ME, Phillips RW, Elzer PH, Roop HRM, Peterson KM. 1994. pBBR1MCS: a broad-host-range cloning vector. Biotechniques 16:800- 802.