-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0019805971
-
Specific-purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas
-
Bagdasarian, M., Lurz, R., Rueckert, B., Franklin, F.C.H., Bagdasarian, M.M., Frey, J., and Timmis, K.N. (1981) Specific-purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas. Gene 16: 237-247.
-
(1981)
Gene
, vol.16
, pp. 237-247
-
-
Bagdasarian, M.1
Lurz, R.2
Rueckert, B.3
Franklin, F.C.H.4
Bagdasarian, M.M.5
Frey, J.6
Timmis, K.N.7
-
3
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner, F.R., Plunkett, G., III, Bloch, C.A., Parna, N.T., Burland, V., Riley, M., et al. (1997) The complete genome sequence of Escherichia coli K-12. Science 277: 1453-1474.
-
(1997)
Science
, vol.277
, pp. 1453-1474
-
-
Blattner, F.R.1
Plunkett G. III2
Bloch, C.A.3
Parna, N.T.4
Burland, V.5
Riley, M.6
-
4
-
-
0026059425
-
More von Willebrand factor type A domains? Sequence similarities with malaria thrombospondin-related anonymous protein, dihydropyridinesensitive calcium channel and inter-alpha-trypsin inhibitor
-
Bork, P., and Rohde, K. (1991) More von Willebrand factor type A domains? Sequence similarities with malaria thrombospondin-related anonymous protein, dihydropyridinesensitive calcium channel and inter-alpha-trypsin inhibitor. Biochem J 279: 908-910.
-
(1991)
Biochem J
, vol.279
, pp. 908-910
-
-
Bork, P.1
Rohde, K.2
-
5
-
-
0034123131
-
Identification of novel loci involved in entry by Legionella pneumophila
-
Cirillo, S.L., Lum, J., and Cirillo, J.D. (2000) Identification of novel loci involved in entry by Legionella pneumophila. Microbiology 146: 1345-1359.
-
(2000)
Microbiology
, vol.146
, pp. 1345-1359
-
-
Cirillo, S.L.1
Lum, J.2
Cirillo, J.D.3
-
6
-
-
0033765659
-
An interactive web-based Pseudomonas aeruginosa genome database: Discovery of new genes, pathways and structures
-
Croft, L., Beatson, S.A., Whitchurch, C.B., Huang, B., Blakeley, R.L., and Mattick, J.S. (2000) An interactive web-based Pseudomonas aeruginosa genome database: Discovery of new genes, pathways and structures. Microbiology 146: 2351-2364.
-
(2000)
Microbiology
, vol.146
, pp. 2351-2364
-
-
Croft, L.1
Beatson, S.A.2
Whitchurch, C.B.3
Huang, B.4
Blakeley, R.L.5
Mattick, J.S.6
-
7
-
-
0035050284
-
Bap, a Staphylococcus aureus surface protein involved in biofilm formation
-
Cucarella, C., Solano, C., Valle, J., Amorema, B., Lasa, I., and Penades, J.R. (2001) Bap, a Staphylococcus aureus surface protein involved in biofilm formation. J Bacteriol 183: 2888-2896.
-
(2001)
J Bacteriol
, vol.183
, pp. 2888-2896
-
-
Cucarella, C.1
Solano, C.2
Valle, J.3
Amorema, B.4
Lasa, I.5
Penades, J.R.6
-
8
-
-
0035214565
-
Bioaugmentation of soils by increasing microbial richness: Missing links
-
Dejonghe, W., Boon, N., Seghers, D., Top, E.M., and Verstraete, W. (2001) Bioaugmentation of soils by increasing microbial richness: Missing links. Environ Microbiol 3: 649-657.
-
(2001)
Environ Microbiol
, vol.3
, pp. 649-657
-
-
Dejonghe, W.1
Boon, N.2
Seghers, D.3
Top, E.M.4
Verstraete, W.5
-
9
-
-
0034005123
-
Genetic analysis of functions involved in adhesion of Pseudomonas putida to seeds
-
Espinosa-Urgel, M., Salido, A., and Ramos, J.L. (2000) Genetic analysis of functions involved in adhesion of Pseudomonas putida to seeds. J Bacteriol 182: 2363-2369.
-
(2000)
J Bacteriol
, vol.182
, pp. 2363-2369
-
-
Espinosa-Urgel, M.1
Salido, A.2
Ramos, J.L.3
-
10
-
-
0029653518
-
Whole-genome random sequencing and assembly of Haemophilus influenzae Rd
-
Fleischmann, R.D., Adams, M.D., White, O., Clayton, R.A., Kirkness, E.F., Kervalage, A.R., et al. (1995) Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. Science 269: 496-512.
-
(1995)
Science
, vol.269
, pp. 496-512
-
-
Fleischmann, R.D.1
Adams, M.D.2
White, O.3
Clayton, R.A.4
Kirkness, E.F.5
Kervalage, A.R.6
-
11
-
-
0028829125
-
The minimal gene complement of Mycoplasma genitalium
-
Fraser, C.M., Gocayne, J.D., White, O., Adams, M.D., Clayton, R.A., Fleischmann, R.D., et al. (1995) The minimal gene complement of Mycoplasma genitalium. Science 270: 397-403.
-
(1995)
Science
, vol.270
, pp. 397-403
-
-
Fraser, C.M.1
Gocayne, J.D.2
White, O.3
Adams, M.D.4
Clayton, R.A.5
Fleischmann, R.D.6
-
12
-
-
0029884694
-
GOR secondary structure prediction method version IV
-
Gamier, J., Gibrat, J.-F., and Robson, B. (1996) GOR secondary structure prediction method version IV. Methods Enzymol 266: 540-553.
-
(1996)
Methods Enzymol
, vol.266
, pp. 540-553
-
-
Gamier, J.1
Gibrat, J.-F.2
Robson, B.3
-
13
-
-
0035948585
-
Expressivity is the main factor in dictating the codon usage variation among the genes in Pseudomonas aeruginosa
-
Gupta, S.K., and Ghosh, T.C. (2001) Expressivity is the main factor in dictating the codon usage variation among the genes in Pseudomonas aeruginosa. Gene 273: 63-70.
-
(2001)
Gene
, vol.273
, pp. 63-70
-
-
Gupta, S.K.1
Ghosh, T.C.2
-
14
-
-
0036128584
-
Pathogenicity islands and the evolution of pathogenic microbes
-
Hacker, J., and Kaper, J.B. (eds) (2002) Pathogenicity islands and the evolution of pathogenic microbes. Curr Topics Microbiol Immunol 264/1: 1-211.
-
(2002)
Curr Topics Microbiol Immunol
, vol.264
, Issue.1
, pp. 1-211
-
-
Hacker, J.1
Kaper, J.B.2
-
15
-
-
0032173634
-
Global dinucleotide signatures and analysis of genomic heterogeneity
-
Karlin, S. (1998) Global dinucleotide signatures and analysis of genomic heterogeneity. Curr Opin Microbiol 1: 598-610.
-
(1998)
Curr Opin Microbiol
, vol.1
, pp. 598-610
-
-
Karlin, S.1
-
16
-
-
0028568008
-
Heterogeneity of genomes: Measures and values
-
Karlin, S., Ladunga, I., and Blaidell, B.E. (1994) Heterogeneity of genomes: Measures and values. Proc Natl Acad Sci USA 91: 12837-12841.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 12837-12841
-
-
Karlin, S.1
Ladunga, I.2
Blaidell, B.E.3
-
17
-
-
1842332701
-
Compositional bias of bacterial genomes and evolutionary implications
-
Karlin, S., Mrazek, J., and Campbell, A.M. (1997) Compositional bias of bacterial genomes and evolutionary implications. J Bacteriol 179: 3899-3913.
-
(1997)
J Bacteriol
, vol.179
, pp. 3899-3913
-
-
Karlin, S.1
Mrazek, J.2
Campbell, A.M.3
-
18
-
-
0032426005
-
Comparative DNA analysis across diverse genomes
-
Karlin, S., Campbell, A.M., and Mrazek, J. (1998) Comparative DNA analysis across diverse genomes. Annu Rev Genet 32: 185-225.
-
(1998)
Annu Rev Genet
, vol.32
, pp. 185-225
-
-
Karlin, S.1
Campbell, A.M.2
Mrazek, J.3
-
19
-
-
0034888743
-
Characterization of highly expressed genes of four fast-growing bacteria
-
Karlin, S., Mrazek, J., Campbell, A., and Kaiser, D. (2001) Characterization of highly expressed genes of four fast-growing bacteria. J Bacteriol 183: 5025-5040.
-
(2001)
J Bacteriol
, vol.183
, pp. 5025-5040
-
-
Karlin, S.1
Mrazek, J.2
Campbell, A.3
Kaiser, D.4
-
20
-
-
0029938912
-
Origin of replication of Mycoplasma genitalium
-
Lobry, J.R. (1996) Origin of replication of Mycoplasma genitalium. Science 272: 745-746.
-
(1996)
Science
, vol.272
, pp. 745-746
-
-
Lobry, J.R.1
-
21
-
-
0032417093
-
Base composition skews, replication orientation, and gene orientation in 12 prokaryotic genomes
-
McLean, M.J., Wolfe, K.H., and Devine, K.M. (1998) Base composition skews, replication orientation, and gene orientation in 12 prokaryotic genomes. J Mol Evol 47: 691-696.
-
(1998)
J Mol Evol
, vol.47
, pp. 691-696
-
-
McLean, M.J.1
Wolfe, K.H.2
Devine, K.M.3
-
22
-
-
0026728196
-
Gene disruption identifies a 290 kDa cell surface polypeptide conferring hydrophobicity and coaggregation properties in Streptococcus gordonii
-
McNab, R., and Jenkinson, H.F. (1992) Gene disruption identifies a 290 kDa cell surface polypeptide conferring hydrophobicity and coaggregation properties in Streptococcus gordonii. Mol Microbiol 6: 2939-2949.
-
(1992)
Mol Microbiol
, vol.6
, pp. 2939-2949
-
-
McNab, R.1
Jenkinson, H.F.2
-
23
-
-
0036933705
-
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
-
Nelson, K.E., Weinel, C., Paulsen, I.T., Dodson, R.J., Hilbert, H., Martins dos Santos, V.A.P., et al. (2002) Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440. Environ Microbiol 4: 799-808.
-
(2002)
Environ Microbiol
, vol.4
, pp. 799-808
-
-
Nelson, K.E.1
Weinel, C.2
Paulsen, I.T.3
Dodson, R.J.4
Hilbert, H.5
Martins dos Santos, V.A.P.6
-
24
-
-
0031953202
-
Tetranucleotide frequencies in microbial genomes
-
Noble, P.A., Citek, R.W., and Ogunseitan, O.A. (1998) Tetranucleotide frequencies in microbial genomes. Electrophoresis 19: 528-535.
-
(1998)
Electrophoresis
, vol.19
, pp. 528-535
-
-
Noble, P.A.1
Citek, R.W.2
Ogunseitan, O.A.3
-
25
-
-
0032518163
-
Microbial gene identification using interpolated Markov models
-
Salzberg, S.L., Delcher, A.L., Kasif, S., and White, O. (1998) Microbial gene identification using interpolated Markov models. Nucleic Acids Res 26: 544-548.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 544-548
-
-
Salzberg, S.L.1
Delcher, A.L.2
Kasif, S.3
White, O.4
-
26
-
-
0034739007
-
Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen
-
Stover, C.K., Pham, X.Q., Erwin, A.L., Mizoguchi, S.D., Warrener, P., Hickey, M.J., et al. (2000) Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen. Nature 406: 959-964.
-
(2000)
Nature
, vol.406
, pp. 959-964
-
-
Stover, C.K.1
Pham, X.Q.2
Erwin, A.L.3
Mizoguchi, S.D.4
Warrener, P.5
Hickey, M.J.6
-
27
-
-
0033935187
-
The contributions of replication orientation, gene direction, and signal sequences to base-composition asymmetries in bacterial genomes
-
Tillier, E.R., and Collins, R.A. (2000) The contributions of replication orientation, gene direction, and signal sequences to base-composition asymmetries in bacterial genomes. J Mol Evol 50: 249-257.
-
(2000)
J Mol Evol
, vol.50
, pp. 249-257
-
-
Tillier, E.R.1
Collins, R.A.2
-
28
-
-
0034467679
-
RTX toxin structure and function: A story of numerous anomalies and few analogies in toxin biology
-
Welch, R.A. (2001) RTX toxin structure and function: A story of numerous anomalies and few analogies in toxin biology. Curr Topics Microbiol Immunol 257: 85-111.
-
(2001)
Curr Topics Microbiol Immunol
, vol.257
, pp. 85-111
-
-
Welch, R.A.1
|