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Volumn 199, Issue 1, 2013, Pages 212-227

Identification of a novel microRNA (miRNA) from rice that targets an alternatively spliced transcript of the Nramp6 (Natural resistance-associated macrophage protein 6) gene involved in pathogen resistance

Author keywords

Alternative splicing; Elicitors; Evolution; Magnaporthe oryzae; Metal transporter; MicroRNA; Nramp; Rice (Oryza sativa)

Indexed keywords

MICRORNA; PLANT RNA; VEGETABLE PROTEIN;

EID: 84878364304     PISSN: 0028646X     EISSN: 14698137     Source Type: Journal    
DOI: 10.1111/nph.12292     Document Type: Article
Times cited : (210)

References (61)
  • 1
    • 4644242349 scopus 로고    scopus 로고
    • RNA silencing in plants
    • Baulcombe D. 2004. RNA silencing in plants. Nature 431: 356-363.
    • (2004) Nature , vol.431 , pp. 356-363
    • Baulcombe, D.1
  • 2
    • 23844550243 scopus 로고    scopus 로고
    • Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs
    • Baumberger N, Baulcombe DC. 2005. Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs. Proceedings of the National Academy of Sciences, USA 102: 11928-11933.
    • (2005) Proceedings of the National Academy of Sciences, USA , vol.102 , pp. 11928-11933
    • Baumberger, N.1    Baulcombe, D.C.2
  • 4
    • 65649123807 scopus 로고    scopus 로고
    • Innate immunity in plants: an arms race between pattern recognition receptors in plants and effectors in microbial pathogens
    • Boller T, He SY. 2009. Innate immunity in plants: an arms race between pattern recognition receptors in plants and effectors in microbial pathogens. Science 324: 742-744.
    • (2009) Science , vol.324 , pp. 742-744
    • Boller, T.1    He, S.Y.2
  • 7
    • 0029978520 scopus 로고    scopus 로고
    • Resistance to intracellular infections: comparative genomic analysis of Nramp
    • Cellier M, Belouchi A, Gros P. 1996. Resistance to intracellular infections: comparative genomic analysis of Nramp. Trends in Genetics 12: 201-204.
    • (1996) Trends in Genetics , vol.12 , pp. 201-204
    • Cellier, M.1    Belouchi, A.2    Gros, P.3
  • 8
    • 79956144553 scopus 로고    scopus 로고
    • Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus
    • Chen C-J, liu Q, Zhang Y-C, Qu L-H, Chen Y-Q, Gautheret D. 2011. Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus. RNA Biology 8: 538-547.
    • (2011) RNA Biology , vol.8 , pp. 538-547
    • Chen, C.-J.1    liu, Q.2    Zhang, Y.-C.3    Qu, L.-H.4    Chen, Y.-Q.5    Gautheret, D.6
  • 9
    • 32944479048 scopus 로고    scopus 로고
    • Host-microbe interactions: shaping the evolution of the plant immune response
    • Chisholm ST, Coaker G, Day B, Staskawicz BJ. 2006. Host-microbe interactions: shaping the evolution of the plant immune response. Cell 124: 803-814.
    • (2006) Cell , vol.124 , pp. 803-814
    • Chisholm, S.T.1    Coaker, G.2    Day, B.3    Staskawicz, B.J.4
  • 10
    • 3442876757 scopus 로고    scopus 로고
    • Transgenic rice plants expressing the antifungal AFP protein from Aspergillus giganteus show enhanced resistance to the rice blast fungus Magnaporthe grisea
    • Coca M, Bortolotti C, Rufat M, Peñas G, Eritja R, Tharreau D, del Pozo A, Messeguer J, San Segundo B. 2004. Transgenic rice plants expressing the antifungal AFP protein from Aspergillus giganteus show enhanced resistance to the rice blast fungus Magnaporthe grisea. Plant Molecular Biology 54: 245-259.
    • (2004) Plant Molecular Biology , vol.54 , pp. 245-259
    • Coca, M.1    Bortolotti, C.2    Rufat, M.3    Peñas, G.4    Eritja, R.5    Tharreau, D.6    del Pozo, A.7    Messeguer, J.8    San Segundo, B.9
  • 11
    • 79953086307 scopus 로고    scopus 로고
    • Evolution and functional diversification of MIRNA genes
    • Cuperus JT, Fahlgren N, Carrington JC. 2011. Evolution and functional diversification of MIRNA genes. Plant Cell 23: 431-442.
    • (2011) Plant Cell , vol.23 , pp. 431-442
    • Cuperus, J.T.1    Fahlgren, N.2    Carrington, J.C.3
  • 13
    • 0034652218 scopus 로고    scopus 로고
    • Alternatively spliced N resistance gene transcripts: their possible role in tobacco mosaic virus resistance
    • Dinesh-Kumar SP, Baker BJ. 2000. Alternatively spliced N resistance gene transcripts: their possible role in tobacco mosaic virus resistance. Proceedings of the National Academy of Sciences, USA 97: 1908-1913.
    • (2000) Proceedings of the National Academy of Sciences, USA , vol.97 , pp. 1908-1913
    • Dinesh-Kumar, S.P.1    Baker, B.J.2
  • 14
    • 69849103740 scopus 로고    scopus 로고
    • Deep-sequencing of plant viral small RNAs reveals effective and widespread targeting of viral genomes
    • Donaire L, Wang Y, Gonzalez-Ibeas D, Mayer KF, Aranda MA, Llave C. 2009. Deep-sequencing of plant viral small RNAs reveals effective and widespread targeting of viral genomes. Virology 392: 203-214.
    • (2009) Virology , vol.392 , pp. 203-214
    • Donaire, L.1    Wang, Y.2    Gonzalez-Ibeas, D.3    Mayer, K.F.4    Aranda, M.A.5    Llave, C.6
  • 18
    • 61349171237 scopus 로고    scopus 로고
    • Biotic and abiotic stress down-regulate miR398 expression in Arabidopsis
    • Jagadeeswaran G, Saini A, Sunkar R. 2009. Biotic and abiotic stress down-regulate miR398 expression in Arabidopsis. Planta 229: 1009-1014.
    • (2009) Planta , vol.229 , pp. 1009-1014
    • Jagadeeswaran, G.1    Saini, A.2    Sunkar, R.3
  • 19
    • 84863012576 scopus 로고    scopus 로고
    • Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
    • Jeong D-H, Park S, Zhai J, Gurazada SGR, De Paoli E, Meyers BC, Green PJ. 2011. Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage. Plant Cell 23: 4185-4207.
    • (2011) Plant Cell , vol.23 , pp. 4185-4207
    • Jeong, D.-H.1    Park, S.2    Zhai, J.3    Gurazada, S.G.R.4    De Paoli, E.5    Meyers, B.C.6    Green, P.J.7
  • 20
    • 33751100626 scopus 로고    scopus 로고
    • The plant immune system
    • Jones JD, Dangl JL. 2006. The plant immune system. Nature 444: 323.
    • (2006) Nature , vol.444 , pp. 323
    • Jones, J.D.1    Dangl, J.L.2
  • 29
    • 35748967300 scopus 로고    scopus 로고
    • Oryza sativa Dicer-like4 reveals a key role for small interfering RNA silencing in plant development
    • Liu B, Chen Z, Song X, Liu C, Cui X, Zhao X, Fang J, Xu W, Zhang H, Wang X et al. 2007. Oryza sativa Dicer-like4 reveals a key role for small interfering RNA silencing in plant development. Plant Cell 19: 2705-2718.
    • (2007) Plant Cell , vol.19 , pp. 2705-2718
    • Liu, B.1    Chen, Z.2    Song, X.3    Liu, C.4    Cui, X.5    Zhao, X.6    Fang, J.7    Xu, W.8    Zhang, H.9    Wang, X.10
  • 30
    • 33644795388 scopus 로고    scopus 로고
    • Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice
    • Liu B, Li P, Li X, Liu C, Cao S, Chu C, Cao X. 2005. Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice. Plant Physiology 139: 296-305.
    • (2005) Plant Physiology , vol.139 , pp. 296-305
    • Liu, B.1    Li, P.2    Li, X.3    Liu, C.4    Cao, S.5    Chu, C.6    Cao, X.7
  • 32
    • 0037144457 scopus 로고    scopus 로고
    • Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA
    • Llave C, Xie Z, Kasschau KD, Carrington JC. 2002. Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA. Science 297: 2053-2056.
    • (2002) Science , vol.297 , pp. 2053-2056
    • Llave, C.1    Xie, Z.2    Kasschau, K.D.3    Carrington, J.C.4
  • 38
    • 33845688601 scopus 로고    scopus 로고
    • A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana
    • Rajagopalan R, Vaucheret H, Trejo J, Bartel D. 2006. A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana. Genes & Development 20: 3407-3425.
    • (2006) Genes & Development , vol.20 , pp. 3407-3425
    • Rajagopalan, R.1    Vaucheret, H.2    Trejo, J.3    Bartel, D.4
  • 39
  • 40
    • 26944466621 scopus 로고    scopus 로고
    • An RNA-dependent RNA polymerase prevents meristem invasion by potato virus X and is required for the activity but not the production of a systemic silencing signal
    • Schwach F, Vaistij FE, Jones L, Baulcombe DC. 2005. An RNA-dependent RNA polymerase prevents meristem invasion by potato virus X and is required for the activity but not the production of a systemic silencing signal. Plant Physiology 138: 1842-1852.
    • (2005) Plant Physiology , vol.138 , pp. 1842-1852
    • Schwach, F.1    Vaistij, F.E.2    Jones, L.3    Baulcombe, D.C.4
  • 42
    • 4944221201 scopus 로고    scopus 로고
    • The rice leaf blast pathogen undergoes developmental processes typical of root-infecting fungi
    • Sesma A, Osbourn AE. 2004. The rice leaf blast pathogen undergoes developmental processes typical of root-infecting fungi. Nature 431: 582.
    • (2004) Nature , vol.431 , pp. 582
    • Sesma, A.1    Osbourn, A.E.2
  • 44
    • 84871276417 scopus 로고    scopus 로고
    • Emerging role for RNA-based regulation in plant immunity
    • Staiger D, Korneli C, Lummer M, Navarro L. 2012. Emerging role for RNA-based regulation in plant immunity. New Phytologist 197: 394-404.
    • (2012) New Phytologist , vol.197 , pp. 394-404
    • Staiger, D.1    Korneli, C.2    Lummer, M.3    Navarro, L.4
  • 45
    • 42149157716 scopus 로고    scopus 로고
    • Identification of novel and candidate miRNAs in rice by high throughput sequencing
    • Sunkar R, Zhou X, Zheng Y, Zhang W, Zhu J-K. 2008. Identification of novel and candidate miRNAs in rice by high throughput sequencing. BMC Plant Biology 8: 25.
    • (2008) BMC Plant Biology , vol.8 , pp. 25
    • Sunkar, R.1    Zhou, X.2    Zheng, Y.3    Zhang, W.4    Zhu, J.-K.5
  • 50
    • 33645967150 scopus 로고    scopus 로고
    • AGO1 homeostasis entails coexpression of MIR168 and AGO1 and preferential stabilization of miR168 by AGO1
    • Vaucheret H, Mallory AC, Bartel DP. 2006. AGO1 homeostasis entails coexpression of MIR168 and AGO1 and preferential stabilization of miR168 by AGO1. Molecular Cell 22: 129-136.
    • (2006) Molecular Cell , vol.22 , pp. 129-136
    • Vaucheret, H.1    Mallory, A.C.2    Bartel, D.P.3
  • 52
    • 60149086351 scopus 로고    scopus 로고
    • Origin, biogenesis, and activity of plant microRNAs
    • Voinnet O. 2009. Origin, biogenesis, and activity of plant microRNAs. Cell 136: 669-687.
    • (2009) Cell , vol.136 , pp. 669-687
    • Voinnet, O.1
  • 53
    • 84867402407 scopus 로고    scopus 로고
    • Genomic dissection of small RNAs in wild rice (Oryza rufipogon): lessons for rice domestication
    • Wang Y, Bai X, Yan C, Gui Y, Wei X, Zhu Q-H, Guo L, Fan L. 2012. Genomic dissection of small RNAs in wild rice (Oryza rufipogon): lessons for rice domestication. New Phytologist 196: 914-925.
    • (2012) New Phytologist , vol.196 , pp. 914-925
    • Wang, Y.1    Bai, X.2    Yan, C.3    Gui, Y.4    Wei, X.5    Zhu, Q.-H.6    Guo, L.7    Fan, L.8
  • 54
    • 73249125240 scopus 로고    scopus 로고
    • Rice microRNA effector complexes and targets
    • Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y. 2009. Rice microRNA effector complexes and targets. Plant Cell 21: 3421-3435.
    • (2009) Plant Cell , vol.21 , pp. 3421-3435
    • Wu, L.1    Zhang, Q.2    Zhou, H.3    Ni, F.4    Wu, X.5    Qi, Y.6
  • 56
    • 84862781522 scopus 로고    scopus 로고
    • Alternative mRNA processing increases the complexity of microRNA-based gene regulation in Arabidopsis
    • Yang X, Zhang H, Li L. 2012. Alternative mRNA processing increases the complexity of microRNA-based gene regulation in Arabidopsis. Plant Journal 70: 421-431.
    • (2012) Plant Journal , vol.70 , pp. 421-431
    • Yang, X.1    Zhang, H.2    Li, L.3
  • 59
    • 0142092368 scopus 로고    scopus 로고
    • RPS4-mediated disease resistance requires the combined presence of RPS4 transcripts with full-length and truncated open reading frames
    • Zhang X-C, Gassmann W. 2003. RPS4-mediated disease resistance requires the combined presence of RPS4 transcripts with full-length and truncated open reading frames. Plant Cell 15: 2333-2342.
    • (2003) Plant Cell , vol.15 , pp. 2333-2342
    • Zhang, X.-C.1    Gassmann, W.2
  • 60
    • 84960125795 scopus 로고    scopus 로고
    • Degradome sequencing reveals endogenous small RNA targets in rice (Oryza sativa L. ssp. indica)
    • Zhou M, Gu L, Li P, Song X, Wei L, Chen Z, Cao X. 2010. Degradome sequencing reveals endogenous small RNA targets in rice (Oryza sativa L. ssp. indica). Frontiers in Biology 5: 67-90.
    • (2010) Frontiers in Biology , vol.5 , pp. 67-90
    • Zhou, M.1    Gu, L.2    Li, P.3    Song, X.4    Wei, L.5    Chen, Z.6    Cao, X.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.