Cloning and evolutionary analysis of tobacco MAPK gene family

Molecular Biology Reports

Volumn 40, Issue 2, 2013, Pages 1407-1415

  Zhang, Xingtan ^a   Cheng, Tingcai ^b   Wang, Genhong ^b   Yan, Yafei ^a   Xia, Qingyou ^b  

^a CHONGQING UNIVERSITY   (China)

^b SOUTHWEST UNIVERSITY   (China)

Author keywords

Mitogen activated protein (MAP) kinase; Phylogenetic analysis; QRT PCR; Tobacco

Indexed keywords

MITOGEN ACTIVATED PROTEIN KINASE; MITOGEN ACTIVATED PROTEIN KINASE 1; MITOGEN ACTIVATED PROTEIN KINASE 3; STRESS ACTIVATED PROTEIN KINASE 1;

ARTICLE; ATHALIANA THALIANA; COMPARATIVE STUDY; CONTROLLED STUDY; DROUGHT STRESS; ENZYME REGULATION; GENE IDENTIFICATION; GENE INDUCTION; MAPK GENE; MOLECULAR CLONING; MOLECULAR EVOLUTION; MULTIGENE FAMILY; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT DEFENSE; PLANT GENE; PLANT STRESS; POPULUS; PROTEIN FUNCTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RICE; TOBACCO;

ACETATES; AMINO ACID SEQUENCE; CLONING, MOLECULAR; CONSENSUS SEQUENCE; CYCLOPENTANES; ENZYME INDUCTION; EVOLUTION, MOLECULAR; GENE EXPRESSION REGULATION, PLANT; MITOGEN-ACTIVATED PROTEIN KINASES; MOLECULAR SEQUENCE ANNOTATION; MOLECULAR SEQUENCE DATA; OXYLIPINS; PHYLOGENY; PLANT GROWTH REGULATORS; PLANT PROTEINS; REAL-TIME POLYMERASE CHAIN REACTION; SALICYLIC ACID; SEQUENCE HOMOLOGY, AMINO ACID; STRESS, PHYSIOLOGICAL; TOBACCO;

NICOTIANA TABACUM;

EID: 84878358774     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-012-2184-9     Document Type: Article

References (52)

1. Christian W et al (1999) Mitogen-activated protein kinase: conservation of a three-kinase module from yeast to human. Physiol Rev 79(1):143-180
2. Tsuneaki A et al (2002) MAP kinase signalling cascade in Arabidopsis innate immunity. Nature 415:977-983
3. Ishihama N et al (2011) Phosphorylation of the Nicotiana benthamiana WRKY8 transcription factor by MAPK functions in the defense response. Plant Cell Online 23(3):1153-1170
4. Hirt H (1997) Multiple roles of MAP kinases in plant signal transduction. Trends Plant Sci 2(1):131-144
5. Shuqun Z, Daniel FK (2001) MAPK cascades in plant defense signaling. Trends Plant Sci 6(11):502-527
6. Claudia J et al (2002) Complexity, cross talk and integration of plant MAP kinase signalling. Curr Opin Plant Biol 5:415-424
7. Agrawal GK et al (2003) Novel rice MAP kinases OsMSRMK3 and OsWJUMK1 involved in encountering diverse environmental stresses and developmental regulation. Biochem Biophys Res Commun 300(3):775-783
8. Nathan SR, Yinong Y (2006) Molecular analysis of the rice MAP kinase gene family in relation to Magnaporthe grisea infection. Mol Plant Microbe Interact 19:530-540
9. Calderini O et al (1998) A cell cycle regulated MAP kinase with a possible role in cytokinesis in tobacco cells. J Cell Sci 111(Pt 20):3091-3100
10. László B et al (1999) A MAP kinase is activated late in plant mitosis and becomes localized to the plane of cell division. Plant Cell 11:101-113
11. Morten P, Peter B, Henrik N (2000) Arabidopsis MAP kinase 4 negatively regulates systemic aquired resistance. Cell 103:1111-1120
12. Uwe C, Corné MJP, Brigitte M-M (2002) Priming in plant-pathogen interactions. Trends Plant Sci 7(5):210-216
13. Beckers GJM, Conrath U (2007) Priming for stress resistance: from the lab to the field. Curr Opin Plant Biol 10(4):425-431
14. Beckers GJM et al (2009) Mitogen-activated protein kinases 3 and 6 are required for full priming of stress responses in Arabidopsis thaliana. Plant Cell Online 21(3):944-953
15. Guillaume T et al (2001) Plant mitogen-activated protein kinase signaling cascades. Curr Opin Plant Biol 4:392-400
16. Ichimura Kazuya et al (2002) Mitogen-activated protein kinase cascades in plants: a new nomenclature. Trends Plant Sci 7:301-308
17. Hamel L-P et al (2006) Ancient signals: comparative genomics of plant MAPK and MAPKK gene families. Trends Plant Sci 11(4):192-198
18. Tae KH et al (2010) Comparative genomic analysis of mitogen activated protein kinase gene family in grapevine. Genes Genomics 32:275-281
19. Krens S, Spaink H, Snaarjagalska B (2006) Functions of the MAPK family in vertebrate-development. FEBS Lett 580(21):4984-4990
20. Krens SFG et al (2006) Characterization and expression patterns of the MAPK family in zebrafish. Gene Expr Patterns 6:1019-1026
21. Shuqun Z, Klessig DF (1997) Salicylic acid activates a 48-kD MAP kinase in tobacco. Plant Cell 9:809-824
22. Shigemi S, Hiroshi S, Ohashi Y (1999) Jasmonate-based wound signal transduction requires activation of WIPK, a tobacco mitogen-activated protein kinase. Plant Cell 11:289-298
23. Shuqun Z, Yidong L, Daniel FK (2000) Multiple levels of tobacco WIPK activation during the induction of cell death by fungal elicitins. Plant J 23(3):339-347
24. Dongtao R et al (2006) Activation of Ntf4, a tobacco mitogen-activated protein kinase, during plant defence response and its involvement in hypersensitive response-like cell death. Plant Physiol 141:1482-1493
25. Yule L, Michael S, Dinesh-Kumar SP (2004) Involvement of MEK1 MAPKK, NTF6 MAPK, WRKY/MYB transcription factors, COL1 and CTR1 in N-mediated resistance to tobacco mosaic virus. Plant J 38:800-809
26. Wilson C et al (1993) Isolation and characterization of a tobacco cDNA clone encoding a putative MAP kinase. Plant Mol Biol 23(3):543-551
27. Gomi K et al (2005) A mitogen-activated protein kinase NtMPK4 activated by SIPKK is required for jasmonic acid signaling and involved in ozone tolerance via stomatal movement in tobacco. Plant Cell Physiol 46(12):1902-1914
28. Dhirendra K, Daniel FK (1999) Differential induction of tobacco MAP kinases by the defense signals nitric oxide, salicylic acid, ethylene, and jasmonic acid. Mol Plant Microbe Interact 13:347-351
29. Kwang-Yeol Y, Yidong L, Shuqun Z (2000) Activation of a mitogen-activated protein kinase pathway is involved in disease resistance in tobacco. PNAS 98:741-746
30. Mary E, Hoyos, Shuqun Z (2000) calcium-independent activation of salicylic acid-induced protein kinase and a 40-kilodalton protein kinase by hyperosmotic stress. Plant Physiol 122:1355-1363
31. Monika M, Ajczyk et al (2000) osmotic stress induces rapid activation of a salicylic acid-induced protein kinase and a homolog of protein kinase ASK1 in tobacco cells. Plant Cell 12:165-178
32. Hailing J et al (2002) Function of a mitogen-activated protein kinase pathway in N gene-mediated resistance in tobacco. Plant J 33:719-731
33. Soyano T (2003) NQK1/NtMEK1 is a MAPKK that acts in the NPK1 MAPKKK-mediated MAPK cascade and is required for plant cytokinesis. Genes Dev 17(8):1055-1067
34. Michiko S et al (2006) Phosphorylation of NtMAP65-1 by a MAP kinase down-regulates its activity of microtubule bundling and stimulates progression of cytokinesis of tobacco cells. Genes Dev 20:1004-1014
35. Maria-Jose C et al (2007) In situ molecular identification of the Ntf4 MAPK expression sites in maturing and germinating pollen. Biol Cell 99:209-221
36. Gaiyun Z et al (2009) Overexpression of the soybean GmERF3 gene, an AP2/ERF type transcription factor for increased tolerances to salt, drought, and diseases in transgenic tobacco. J Exp Bot 60(13):3781-3796
37. Corpet F (1988) Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res 16(22):10881-10890
38. Higgins DG, Thompson JD, Gibson TJ (1996) Using CLUSTAL for multiple sequence alignments. Comput Methods Macromol Seq Anal 266:383-402
39. Tamura K et al (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24(8):1596-1599
40. Jai SR, Yinong Y (2007) Rice Mitogen-activated Protein Kinase Gene Family and Its Role in Biotic and Abiotic Stress Response. J Integr Plant Biol 49(6):751-759
41. Shen X, Yuan B, Liu H, Li X, Xu C, Wang S (2010) Opposite functions of a rice mitogen-activated protein kinase during the process of resistance against Xanthomonas oryzae. Plant J 64:86-99
42. Yang Y, Shah J, Klessig DF (1997) Signal perception and transduction in plant defense responses. Genes Dev 11(13):1621-1639
43. Claudia J et al (1996) Stress signaling in plants: a mitogen-acticated protein kinase pathway is acticated by cold and drought. Proc Natl Acad Sci USA 93:11274-11279
44. Shi J et al (2011) GhMPK16, a novel stress-responsive group D MAPK gene from cotton, is involved in disease resistance and drought sensitivity. BMC Mol Biol 12:22
45. Bennetzen JL (2000) Transposable element contributions to plant gene and genome evolution. Plant Mol Biol 42:251-269
46. Yuan B et al (2007) Mitogen-activated protein kinase OsMPK6 negatively regulates rice disease resistance to bacterial pathogens. Planta 226(4):953-960
47. Ryals John et al (1995) Signal transduction in systemic acquired resistance. Proc Natl Acad Sci USA 92:4202-4205
48. Heil Martin, Bostock RM (2002) Induced Systemic Resistance (ISR) Against Pathogens in the Context of Induced Plant Defences. Ann Bot 89:503-512
49. Koo SC et al (2009) OsBWMK1 mediates SA-dependent defense responses by activating the transcription factor OsWRKY33. Biochem Biophys Res Commun 387(2):365-370
50. Payne George et al (1989) Isolation and sequence of a genomic clone encoding the basic form of pathogenesis-related protein 1 from Nicotiana tabacum. Plant Mol Biol 12:595-596
51. Xu Bingfang, Sheehan MoiraJ, Timko MP (2004) Differential induction of ornithine decarboxylase (ODC) gene family members in transgenic tobacco (Nicotiana tabacum L. cv. Bright Yellow 2)cell suspensions by methyl-jasmonate treatment. Plant Growth Regul 44:101-116
52. Seo Shigemi et al (2007) The mitogen-activated protein kinases WIPK and SIPK regulate the levels of jasmonic and salicylic acids in wounded tobacco plants. Plant J 49:899-909