Large-scale analysis of peptide sequence variants: The case for high-field asymmetric waveform ion mobility spectrometry

Analytical Chemistry

Volumn 85, Issue 10, 2013, Pages 4836-4843

  Creese, Andrew J ^a   Smart, Jade ^a   Cooper, Helen J ^a  

^a UNIVERSITY OF BIRMINGHAM   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

HIGH-FIELD ASYMMETRIC WAVEFORM ION MOBILITY SPECTROMETRIES; LARGE-SCALE ANALYSIS; PEPTIDE SEQUENCES; PREFRACTIONATION; REVERSED-PHASE LIQUID CHROMATOGRAPHY; STRONG CATION EXCHANGES; STRUCTURAL ISOMERS; TANDEM MASS SPECTRA;

LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; MOLECULAR BIOLOGY; PEPTIDES; STATISTICS;

ISOMERS;

PEPTIDE LIBRARY; PHOSPHOPEPTIDE;

AMINO ACID SEQUENCE; BINDING SITE; CHEMISTRY; ISOMERISM; MOLECULAR GENETICS; PEPTIDE LIBRARY; PHOSPHORYLATION; PROCEDURES; PROTEIN DATABASE; PROTEOMICS; REVERSED PHASE LIQUID CHROMATOGRAPHY; TANDEM MASS SPECTROMETRY;

AMINO ACID SEQUENCE; BINDING SITES; CHROMATOGRAPHY, REVERSE-PHASE; DATABASES, PROTEIN; ISOMERISM; MOLECULAR SEQUENCE DATA; PEPTIDE LIBRARY; PHOSPHOPEPTIDES; PHOSPHORYLATION; PROTEOMICS; TANDEM MASS SPECTROMETRY;

EID: 84878291627     PISSN: 00032700     EISSN: 15206882     Source Type: Journal    
DOI: 10.1021/ac400646m     Document Type: Article

References (19)

1. Ow, S. Y.; Salim, M.; Noirel, J.; Evans, C.; Rehman, I.; Wright, P. C. J. Proteome Res. 2009, 8, 5347-5355
2. Ting, L.; Rad, R.; Gygi, S. P.; Haas, W. Nat. Methods 2011, 8, 937-940
3. Barnes, C. A. S.; Hilderbrand, A. E.; Valentine, S. J.; Clemmer, D. E. Anal. Chem. 2002, 74, 26-36
4. Hudgins, R. R.; Jarrold, M. F. J. Am. Chem. Soc. 1999, 121, 3494-3501
5. Srebalus, C. A.; Li, J. W.; Marshall, W. S.; Clemmer, D. E. Anal. Chem. 1999, 71, 3918-3927
6. Shvartsburg, A. A.; Creese, A. J.; Smith, R. D.; Cooper, H. J. Anal. Chem. 2011, 83, 6918-6923
7. Buryakov, I. A.; Krylov, E. V.; Makas, A. L.; Nazarov, E. G.; Pervukhin, V. V.; Rasulev, U. K. Pisma Zh. Tekh. Fiz. 1991, 17, 60-65
8. Buryakov, I. A.; Krylov, E. V.; Nazarov, E. G.; Rasulev, U. K. Int. J. Mass Spectrom. Ion Processes 1993, 128, 143-148
9. Saba, J.; Bonneil, E.; Pomies, C.; Eng, K.; Thibault, P. J. Proteome Res. 2009, 8, 3355-3366
10. Swearingen, K. E.; Hoopmann, M. R.; Johnson, R. S.; Saleem, R. A.; Aitchison, J. D.; Moritz, R. L. Mol. Cell. Proteomics 2012, 11, M111.014985
11. Creese, A. J.; Shimwell, N. J.; Larkins, K. P. B.; Heath, J. K.; Cooper, H. J. J. Am. Soc. Mass Spectrom. 2013, 24, 431-443
12. Bridon, G.; Bonneil, E.; Muratore-Schroeder, T.; Caron-Lizotte, O.; Thibault, P. J. Proteome Res. 2012, 11, 927-940
13. Sweet, S. M. M.; Bailey, C. M.; Cunningham, D. L.; Heath, J. K.; Cooper, H. J. Mol. Cell. Proteomics 2009, 8, 904-912
14. Courcelles, M.; Bridon, G.; Lemieux, S.; Thibault, P. J. Proteome Res. 2012, 11, 3756-3765
15. Syka, J. E. P.; Coon, J. J.; Schroeder, M. J.; Shabanowitz, J.; Hunt, D. F. Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 9528-9533
16. Cooper, H. J.; Hakansson, K.; Marshall, A. G. Mass Spectrom. Rev. 2005, 24, 201-222
17. Mann, M.; Ong, S. E.; Gronborg, M.; Steen, H.; Jensen, O. N.; Pandey, A. Trends Biotechnol. 2002, 20, 261-268
18. Sweet, S. M. M.; Creese, A. J.; Cooper, H. J. Anal. Chem. 2006, 78, 7563-7569
19. Swaney, D. L.; McAlister, G. C.; Coon, J. J. Nat. Methods 2008, 5, 959-964