Diversity and antibacterial activity of culturable actinobacteria isolated from five species of the South China Sea gorgonian corals

World Journal of Microbiology and Biotechnology

Volumn 29, Issue 6, 2013, Pages 1107-1116

  Zhang, Xiao Yong ^a   He, Fei ^a   Wang, Guang Hua ^a   Bao, Jie ^a   Xu, Xin Ya ^a   Qi, Shu Hua ^a  

^a SOUTH CHINA SEA INSTITUTE OF OCEANOLOGY   (China)

Author keywords

Antibacterial activity; Culturable gorgonian associated actinobacteria; Phylogenetic analysis; The South China Sea

Indexed keywords

ACTINOBACTERIA; ANTI-BACTERIAL ACTIVITY; ANTI-BACTERIAL AGENTS; DIVERSE COMMUNITY; INDICATOR BACTERIA; PHYLOGENETIC ANALYSIS; SHALLOW WATERS; SOUTH CHINA SEA;

BIOLOGY; CHEMISTRY;

BACTERIA;

ANTIINFECTIVE AGENT; BACTERIAL DNA; RIBOSOME DNA; RNA 16S; SEA WATER;

ACTINOBACTERIA; ANIMAL; ANTHOZOA; ANTIBIOSIS; ARTICLE; BIODIVERSITY; CHEMISTRY; CHINA; CLASSIFICATION; CLUSTER ANALYSIS; DNA SEQUENCE; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PHYSIOLOGY;

ACTINOBACTERIA; ANIMALS; ANTHOZOA; ANTI-BACTERIAL AGENTS; ANTIBIOSIS; BIODIVERSITY; CHINA; CLUSTER ANALYSIS; DNA, BACTERIAL; DNA, RIBOSOMAL; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEAWATER; SEQUENCE ANALYSIS, DNA;

ACTINOBACTERIA; AGROCOCCUS; ANTHOZOA; BACTERIA (MICROORGANISMS); DIETZIA; ECHINOGORGIA AURANTIACA; GORGONACEA; GORGONIA; MELITODES; MICROMONOSPORA; MURICELLA; NOCARDIA; NOCARDIOPSIS; PSEUDONOCARDIA; RHODOCOCCUS; SACCHAROMONOSPORA; SACCHAROPOLYSPORA; SQUAMATA; STREPTOMYCES; SUBERGORGIA SUBEROSA; UMBRACULUM; VERRUCOSISPORA;

EID: 84878108846     PISSN: 09593993     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11274-013-1279-3     Document Type: Article

References (39)

1. Banin E, Israely T, Kusmaro A, Loya Y, Orr E, Rosenberg E (2000) Penetration of the coral-bleaching bacterium Vibrio shiloi into Oculina patgonica. Appl Environ Microbiol 66: 3031-3036.
2. Bourne DG, Munn CB (2005) Diversity of bacteria associated with the coral Pocillopora damicornis from the Great Barrier Reef. Environ Microbiol 7: 1162-1174.
3. Chen YH, Kuo J, Sung PJ, Chang YC, Lu MC, Wong TY, Liu JK, Weng CF, Twan WH, Kuo FW (2012) Isolation of marine bacteria with antimicrobial activities from cultured and field-collected soft corals. World J Microb Biotechnol. doi: 10. 1007/s11274-012-1138-7.
4. Frias-Lopez J, Zerkle AL, Bonheyo GT, Fouke BW (2002) Partitioning of bacterial communities between seawater and healthy, black band diseased, and dead coral surfaces. Appl Environ Microbiol 68: 2214-2228.
5. Gil VS, Pastor S, March GJ (2009) Quantitative isolation of biocontrol agents Trichoderma spp., Gliocladium spp. and actinomycetes from soil with culture media. Microb Res 164: 196-205.
6. Goh NKC, Chou LM (1994) Distribution and biodiversity of Singapore gorgonians (sub-class Octocorallia)-a preliminary survey. Hydrobiologia 285: 101-109.
7. Goodfellow M, Maldonado LA (2006) The families dietziaceae, gordoniaceae, nocardiaceae and tsukamurellaceae. Prokaryotes 3: 843-888.
8. Gray MA, Stone RP, Mclaughlin MR, Kellogg CA (2011) Microbial consortia of gorgonian corals from the Aleutian islands. FEMS Microbiol Ecol 76: 109-120.
9. Harder T, Lau SCK, Dobretsov S, Fang TK, Qian PY (2003) A distinctive epibiotic bacterial community on the soft coral Dendronephthya sp. and antibacterial activity of coral tissue extracts suggest a chemical mechanism against bacterial epibiosis. FEMS Microbiol Ecol 43: 337-347.
10. Huang H, Li XB, He JG, Zou RL (2007) Species diversity and distribution of gorgonian at Xuwen, Zhanjian, Guangdong province. J Trop Ocean (in Chinese) 26: 60-67.
11. Jensen PR, Mincer TJ, Williams PG, Fenical W (2005) Marine actinomycete diversity and natural product discovery. Antonie van Leeuwenhoek 87: 43-48.
12. Jiang SM, Sun W, Chen MJ, Dai SK, Zhang L, Liu YH, Lee KJ, Li X (2007) Diversity of culturable actinobacteria isolated form marine sponge Haliclona sp. Antonie van Leeuwenhoek 92: 405-416.
13. Jiang SM, Li X, Zhang L, Sun W, Dai SK, Xie LW, Liu YH, Lee KJ (2008) Culturable actinobacteria isolated from sponge Iotrochota sp. Mar Biol 153: 945-952.
14. Koh LL, Goh NKC, Chou LM, Tan YW (2000) Chemical and physical defenses of Singapore gorgonians (Octocorallia: Gorgonacea). J Exp Mar Biol Ecol 251: 103-115.
15. Lampert Y, Kelman D, Nitzan Y, Dubinsky Z, Behar A, Hill RT (2008) Phylogenetic diversity of bacteria associated with the mucus of Red sea corals. FEMS Microbiol Ecol 1: 1-17.
16. Lane AL, Moore BS (2011) A sea of biosynthesis: marine natural products meet 610 the molecular age. Nat Prod Rep 28: 411-428.
17. Lau SCK, Mark KKW, Chen F, Qian PY (2002) Bioactivity of bacterial strains isolated from marine biofilms in Hong Kong waters for the induction of larval settlement in the marine polychaete Hydroides elegants. Mar Ecol Prog Ser 226: 301-310.
18. Lee YK, Kim HW, Liu CL, Lee HK (2003) A simple method for DNA extraction from marine bacteria that produce extracellular materials. J Microbiol Methods 52: 245-250.
19. Li X, De BSH (1995) Selection of polymerase chain reaction primers from an RNA intergenic spacer region for specific detection of Clavibacter michiganensis subsp. sepedonicus. Phytopathol 85: 837-842.
20. Littman RA, Willis B, Pfeffer C, Bourne DG (2009) Diversities of coral-associated bacteria differ with location, but not species, for three acroporid corals on the Great Barrier Reef. FEMS Microbiol Ecol 68: 152-163.
21. Loannou E, Abdel-Razik AF, Alexi X, Vagias C, Alexis MN, Roussis V (2009) 9, 11-Secosterols with antiproliferative activity from the gorgonian Eunicella cavolini. Bioorg Med Chem 17: 4537-4541.
22. Maldonado LA, Stach JEM, Pathom W, Ward AC, Bull AT, Goodfellow M (2005) Diversity of cultivable actinobacteria in geographically widespread marine sediments. Antonie van Leeuwenhoek 87: 11-18.
23. Nithyanand P, Indhumathi T, Ravi AV, Pandian SK (2011a) Culture independent characterization of bacteria associated with the mucus of the coral Acropora digitifera from the Gulf of Mannar. World J Microb Biotechnol 27: 1399-1406.
24. Nithyanand P, Manju S, Pandian SK (2011b) Phylogenetic characterization of culturable actinomycetes associated with the mucus of the coral Acropora digitifera from Gulf of Mannar. FEMS Microbiol Lett 314: 112-118.
25. Qi SH, Zhang S, Qian PY, Xiao ZH, Li MY (2006) Ten new antifouling briarane diterpenoids from the South China Sea gorgonian Junceella juncea. Tetrahedron 62: 9123-9130.
26. Qi SH, Zhang S, Qian PY, Wang BG (2008) Antifeedant, antibacterial, and antilarval compounds from the South China Sea seagrass Enhalus acoroides. Bot Mar 51: 441-447.
27. Reshef L, Koren O, Loya Y, Zilber-Rosenberg I, Rosenberg E (2006) The coral probiotic hypothesis. Eenviron Microbiol 8: 2068-2073.
28. Ritchie KB (2006) Regulation of microbial populations by coral surface mucus and mucus-associated bacteria. Mar Ecol Prog Ser 322: 1-14.
29. Rohwer F, Breitbart M, Jara J, Azam F, Knowlton N (2001) Diversity of bacteria associated with the Caribbean coral Montastraea franksi. Coral Reefs 20: 85-91.
30. Rohwer F, Seguritan V, Azam F, Knowlton N (2002) Diversity and distribution of coral- associated bacteria. Mar Ecol Prog Ser 243: 1-10.
31. Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Bio Evol 4: 406-425.
32. Santavy DL, Peters E C (1997) Microbial pests: coral disease in the western Atlantic. In Proceedings of 8th international coral reef symposium of publication, vol 1, pp 607-612.
33. Shnit-Orland M, Kushmaro A (2009) Coral mucus-associated bacteria: a possible first line of defense. FEMS Microbiol Ecol 67: 371-380.
34. Sun LL, Shao CL, Mei WL, Huang H, Wang CY, Dai HF (2010) Chemical constituents of gorgonian Verrucella umbraculum from the South China Sea. Biochem Syst Ecol 38: 1085-1087.
35. Wu YY, Lu CH, Qian XM, Huang YJ, Shen YM (2009) Diversity with genotypes, bioactivity and biosynthetic genes of endophytic actinomycetes isolated from three pharmaceutical plants. Curr Microbiol 59: 475-482.
36. Zhang W, Li ZY, Miao XL, Zhang FL (2009) The screening of antimicrobial bacteria with diverse novel nonribosomal peptide synthetase (NRPS) genes from South China Sea Sponges. Mar Biotechnol 11: 346-355.
37. Zhu N, Zhao PJ, Shen YM (2009) Selective Isolation and Ansamycin-Targeted Screenings of Commensal Actinomycetes from the "Maytansinoids-Producing" Arboreal Trewia nudiflora. Curr Microbiol 58: 87-94.
38. Zlamala C, Schumann P, Kampfer P, Rossello-Mora R, Lubitz W, Busse HJ (2002) Agrococcus baldri sp. nov., isolated from the air in the "Virgilkapelle" in vienna. Int J Syst Evol Microbiol 52: 1211-1216.
39. Zotchev SB (2011) Marine actinomycetes as an emerging resource for the drug development pipelines. J Biotechnol. doi: 10. 1016/j. jbiotec. 2011. 06. 002.