메뉴 건너뛰기




Volumn 153, Issue 5, 2008, Pages 945-952

Culturable actinobacteria isolated from marine sponge Iotrochota sp.

Author keywords

16S rRNA; Actinobacteria; Marine sponge; NRPS; PKS; RFLP

Indexed keywords

BACTERIUM; CLASSIFICATION; DIVERGENCE; EVOLUTION; NEW SPECIES; PHYLOGENY; SPECIES DIVERSITY; SPONGE; TAXONOMY;

EID: 39049153999     PISSN: 00253162     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00227-007-0866-y     Document Type: Article
Times cited : (40)

References (39)
  • 2
    • 19944362206 scopus 로고    scopus 로고
    • New PCR primers for the screening of NRPS and PKS-I systems in actinomycetes: Detection and distribution of these biosynthetic gene sequences in major taxonomic groups
    • Ayuso-Sacido A, Genilloud O (2005) New PCR primers for the screening of NRPS and PKS-I systems in actinomycetes: detection and distribution of these biosynthetic gene sequences in major taxonomic groups. Microb Ecol 49:10-24
    • (2005) Microb Ecol , vol.49 , pp. 10-24
    • Ayuso-Sacido, A.1    Genilloud, O.2
  • 4
    • 0001058896 scopus 로고
    • Contignasterol, a highly oxygenated steroid with the " unnatural" 14β configuration from the marine sponge Petrosia contignata Thiele, 1899
    • 6
    • Burgoyne DL, Andersen RJ, Allen TM (1992) Contignasterol, a highly oxygenated steroid with the "unnatural" 14β configuration from the marine sponge Petrosia contignata Thiele, 1899. J Org Chem 57(6):525-528
    • (1992) J Org Chem , vol.57 , pp. 525-528
    • Burgoyne, D.L.1    Andersen, R.J.2    Allen, T.M.3
  • 5
    • 0344034163 scopus 로고    scopus 로고
    • Rapid identification of filamentous actinomycetes to the genus level using genus-specific 16S rRNA gene restriction fragment patterns
    • Cook AE, Meyers PR (2003) Rapid identification of filamentous actinomycetes to the genus level using genus-specific 16S rRNA gene restriction fragment patterns. Int J Syst Evol Microbiol 53:1907-1915
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 1907-1915
    • Cook, A.E.1    Meyers, P.R.2
  • 7
    • 0034141601 scopus 로고    scopus 로고
    • Marine natural products
    • Faulkner DJ (2000) Marine natural products. Nat Prod Rep 17:7-55
    • (2000) Nat Prod Rep , vol.17 , pp. 7-55
    • Faulkner, D.J.1
  • 8
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 9
    • 33646541674 scopus 로고    scopus 로고
    • Revisiting the Cellulosimicrobium cellulans yeast-lytic β-1, 3-glucanases toolbox: A review.
    • Ferrer P (2006) Revisiting the Cellulosimicrobium cellulans yeast-lytic β-1, 3-glucanases toolbox: a review. Microb Cell Fact 5:10
    • (2006) Microb Cell Fact , vol.5 , pp. 10
    • Ferrer, P.1
  • 10
    • 9244234513 scopus 로고    scopus 로고
    • Biosynthesis of nonribosomal peptides
    • Finking R, Marahiel AM (2004) Biosynthesis of nonribosomal peptides. Annu Rev Microbiol 28:453-488
    • (2004) Annu Rev Microbiol , vol.28 , pp. 453-488
    • Finking, R.1    Marahiel, A.M.2
  • 11
    • 0035956590 scopus 로고    scopus 로고
    • Temporal variation of the microbial community associated with the Mediterranean sponge Aplysina aerophoba
    • Friedrich AB, Fischer I, Proksch P, Hacker J, Hentschel U (2001) Temporal variation of the microbial community associated with the Mediterranean sponge Aplysina aerophoba. FEMS Microbiol Ecol 38:105-113
    • (2001) FEMS Microbiol Ecol , vol.38 , pp. 105-113
    • Friedrich, A.B.1    Fischer, I.2    Proksch, P.3    Hacker, J.4    Hentschel, U.5
  • 13
    • 0038461995 scopus 로고    scopus 로고
    • Drugs from the deep: Marine natural products as drug candidates
    • Haefner B (2003) Drugs from the deep: marine natural products as drug candidates. Drug Discov Today 8:536-544
    • (2003) Drug Discov Today , vol.8 , pp. 536-544
    • Haefner, B.1
  • 15
    • 23744482522 scopus 로고    scopus 로고
    • Molecular detection of Cellulosimicrobium cellulans as the etiological agent of a chronic tongue ulcer in a human immunodeficiency virus-positive patient
    • 8
    • Heym B, Gehanno P, Friocourt V, Bougnoux ME, Moal ML, Husson C, Leibowitch J, Nicolas-Chanoine MH (2005) Molecular detection of Cellulosimicrobium cellulans as the etiological agent of a chronic tongue ulcer in a human immunodeficiency virus-positive patient. J Clin Microbiol 43(8):4269-4271
    • (2005) J Clin Microbiol , vol.43 , pp. 4269-4271
    • Heym, B.1    Gehanno, P.2    Friocourt, V.3    Bougnoux, M.E.4    Moal, M.L.5    Husson, C.6    Leibowitch, J.7    Nicolas-Chanoine, M.H.8
  • 16
    • 19044394553 scopus 로고    scopus 로고
    • Sponge-associated bacteria: General overview and special aspects of bacteria association with Halichondria panacea
    • Springer Berlin
    • Imhoff JF, Stöhr R (2003) Sponge-associated bacteria: general overview and special aspects of bacteria association with Halichondria panacea. In: Müller WEG (ed) Sponge (Porifera). Springer, Berlin, pp 35-58
    • (2003) Sponge (Porifera) , pp. 35-58
    • Imhoff, J.F.1    Stöhr, R.2    Müller, W.E.G.3
  • 18
    • 33847186292 scopus 로고    scopus 로고
    • Species-specific secondary metabolite production in marine actinomycetes of the genus Salinispora
    • 4
    • Jensen PR, Williams PG, Oh DC, Zeigler L, Fenical W (2007) Species-specific secondary metabolite production in marine actinomycetes of the genus Salinispora. Appl Environ Microbiol 73(4):1146-1152
    • (2007) Appl Environ Microbiol , vol.73 , pp. 1146-1152
    • Jensen, P.R.1    Williams, P.G.2    Oh, D.C.3    Zeigler, L.4    Fenical, W.5
  • 20
    • 0029554401 scopus 로고
    • KRN7000, a novel immunomodulator, and its antitumor activities
    • 10-11
    • Kobayashi E, Motoki K, Uchida T, Fukushima H, Koezuka Y (1995) KRN7000, a novel immunomodulator, and its antitumor activities. Oncol Res 7(10-11):529-534
    • (1995) Oncol Res , vol.7 , pp. 529-534
    • Kobayashi, E.1    Motoki, K.2    Uchida, T.3    Fukushima, H.4    Koezuka, Y.5
  • 21
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar S, Tamura K, Nei M (2004) MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5:150-163
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 24
    • 0345816862 scopus 로고    scopus 로고
    • Microbial symbiosis in marine sponges
    • Lee YK, Lee JH, Lee HK (2001) Microbial symbiosis in marine sponges. J Microbiol 39:254-264
    • (2001) J Microbiol , vol.39 , pp. 254-264
    • Lee, Y.K.1    Lee, J.H.2    Lee, H.K.3
  • 25
    • 0028795166 scopus 로고
    • Selection of polymerase chain reaction primers from an RNA intergenic spacer region for specific detection of Clavibacter michiganensis subsp. sepedonicus
    • 8
    • Li X, De Boer SH (1995) Selection of polymerase chain reaction primers from an RNA intergenic spacer region for specific detection of Clavibacter michiganensis subsp. sepedonicus. Phytopathology 85(8):837-842
    • (1995) Phytopathology , vol.85 , pp. 837-842
    • Li, X.1    De Boer, S.H.2
  • 27
    • 0033486199 scopus 로고    scopus 로고
    • Biosynthesis of marine natural products: Microorganisms and macroalgae
    • Moore BS (1999) Biosynthesis of marine natural products: microorganisms and macroalgae. Nat Prod Rep 16:653-674
    • (1999) Nat Prod Rep , vol.16 , pp. 653-674
    • Moore, B.S.1
  • 29
    • 0029799968 scopus 로고    scopus 로고
    • The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: Proposal of Nocardiopsaceae fam. nov
    • Rainey FA, Ward-Rainey N, Kroppenstedt RM, Stackebrandt E (1996) The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov. Int J Syst Bacteriol 46:1088-1092
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 1088-1092
    • Rainey, F.A.1    Ward-Rainey, N.2    Kroppenstedt, R.M.3    Stackebrandt, E.4
  • 30
    • 0027937370 scopus 로고
    • Amino acid derivatives from the marine sponge Jaspis digonoxea
    • Rudi A, Kashman Y, Benayahu Y, Schleyer M (1994) Amino acid derivatives from the marine sponge Jaspis digonoxea. J Nat Prod 57:829-832
    • (1994) J Nat Prod , vol.57 , pp. 829-832
    • Rudi, A.1    Kashman, Y.2    Benayahu, Y.3    Schleyer, M.4
  • 31
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Bio Evol 4:406-425
    • (1987) Mol Bio Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 32
    • 0000693758 scopus 로고    scopus 로고
    • Identification of the antifungal peptide-containing symboiont of the marine sponge Theonella swinhoei as a novel d-proteobacterium, "candidatus Entotheonella palauensis."
    • Schmidt EW, Obraztsova AY, Davidson SK, Faulkner DJ, Haygood MG (2000) Identification of the antifungal peptide-containing symboiont of the marine sponge Theonella swinhoei as a novel d-proteobacterium, "Candidatus Entotheonella palauensis.". Mar Biol 136:969-977
    • (2000) Mar Biol , vol.136 , pp. 969-977
    • Schmidt, E.W.1    Obraztsova, A.Y.2    Davidson, S.K.3    Faulkner, D.J.4    Haygood, M.G.5
  • 33
    • 0034980763 scopus 로고    scopus 로고
    • Reclassification of Cellulomonas cellulans (Stackebrandt and Keddie 1986) as Cellulosimicrobium cellulans gen. nov., comb. nov
    • Schumann P, Weiss N, Stackebrandt E (2001) Reclassification of Cellulomonas cellulans (Stackebrandt and Keddie 1986) as Cellulosimicrobium cellulans gen. nov., comb. nov. Int J Syst Evol Microbiol 51:1007-1010
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 1007-1010
    • Schumann, P.1    Weiss, N.2    Stackebrandt, E.3
  • 34
    • 0024192007 scopus 로고
    • A marine Micrococcus produces metabolites ascribed to the sponge Tedania ignis
    • Stierle AC, Cardellina JHI, Singleton FL (1988) A marine Micrococcus produces metabolites ascribed to the sponge Tedania ignis. Experientia 44:1021
    • (1988) Experientia , vol.44 , pp. 1021
    • Stierle, A.C.1    Cardellina, J.H.I.2    Singleton, F.L.3
  • 35
    • 0000393614 scopus 로고
    • Electron microscope study of the association between some sponges and bacteria
    • Vacelet J, Donadey C (1977) Electron microscope study of the association between some sponges and bacteria. J Exp Mar Ecol 30:301-314
    • (1977) J Exp Mar Ecol , vol.30 , pp. 301-314
    • Vacelet, J.1    Donadey, C.2
  • 36
    • 1342289956 scopus 로고    scopus 로고
    • Actinobacterial 16S rRNA genes from freshwater habitats cluster in four distinct lineages
    • Warnecke F, Amann R, Pernthaler J (2004) Actinobacterial 16S rRNA genes from freshwater habitats cluster in four distinct lineages. Environ Microbiol 6:242-253
    • (2004) Environ Microbiol , vol.6 , pp. 242-253
    • Warnecke, F.1    Amann, R.2    Pernthaler, J.3
  • 37
    • 0035051257 scopus 로고    scopus 로고
    • The culturable microbial community of the Great Barrier Reef sponge Rhopaloeides odorabile is dominated by α-proteobacterium
    • Webster NS, Hill RT (2001) The culturable microbial community of the Great Barrier Reef sponge Rhopaloeides odorabile is dominated by α-proteobacterium. Mar Biol 138:843-851
    • (2001) Mar Biol , vol.138 , pp. 843-851
    • Webster, N.S.1    Hill, R.T.2
  • 38
    • 0021012648 scopus 로고
    • Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids
    • Woese CR, Gutell R, Gupta R, Noller HF (1983) Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids. Microbiol Rev 47:621-669
    • (1983) Microbiol Rev , vol.47 , pp. 621-669
    • Woese, C.R.1    Gutell, R.2    Gupta, R.3    Noller, H.F.4
  • 39
    • 33747657075 scopus 로고    scopus 로고
    • Culturable actinobacteria from the marine sponge Hymeniacidon perleve: Isolation and phylogenetic diversity by 16S rRNA gene-RFLP analysis
    • Zhang HT, Lee YK, ZhangW, Lee HK (2006) Culturable actinobacteria from the marine sponge Hymeniacidon perleve: isolation and phylogenetic diversity by 16S rRNA gene-RFLP analysis. Antonie Van Leeuwenhoek 90:159-169
    • (2006) Antonie Van Leeuwenhoek , vol.90 , pp. 159-169
    • Zhang, H.T.1    Lee, Y.K.2    Zhangw3    Lee, H.K.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.