-
2
-
-
0033607218
-
Insight into the mechanism of phosphoenolpyruvate mutase catalysis derived from site-directed mutagenesis studies of active site residues
-
Jia, Y., Lu, Z. B., Huang, K., Herzberg, O. & Dunaway-Mariano, D. Insight into the mechanism of phosphoenolpyruvate mutase catalysis derived from site-directed mutagenesis studies of active site residues. Biochemistry 38, 14165-14173 (1999).
-
(1999)
Biochemistry
, vol.38
, pp. 14165-14173
-
-
Jia, Y.1
Lu, Z.B.2
Huang, K.3
Herzberg, O.4
Dunaway-Mariano, D.5
-
4
-
-
0345129307
-
Cleavage of the carbon to phosphorus bond of organophosphonates by bacterial systems
-
Lacoste, A. M., Dumora, C. & Cassaigne, A. Cleavage of the carbon to phosphorus bond of organophosphonates by bacterial systems. Biochem. Adv. (Life Sci. ) 8, 97-109 (1989).
-
(1989)
Biochem. Adv. (Life Sci. )
, vol.8
, pp. 97-109
-
-
Lacoste, A.M.1
Dumora, C.2
Cassaigne, A.3
-
5
-
-
0000627987
-
Isolation of 2-aminoethane phosphonic acid from rumen protozoa
-
Horiguchi, M. & Kandatsu, M. Isolation of 2-aminoethane phosphonic acid from rumen protozoa. Nature 184, 901-902 (1959).
-
(1959)
Nature
, vol.184
, pp. 901-902
-
-
Horiguchi, M.1
Kandatsu, M.2
-
7
-
-
67650743221
-
Biosynthesis of phosphonic and phosphinic acid natural products
-
Metcalf, W. W. & van der Donk, W. A. Biosynthesis of phosphonic and phosphinic acid natural products. Annu. Rev. Biochem. 78, 65-94 (2009).
-
(2009)
Annu. Rev. Biochem
, vol.78
, pp. 65-94
-
-
Metcalf, W.W.1
Van Der Donk, W.A.2
-
8
-
-
0014662797
-
Phosphonomycin, a new antibiotic produced by strains of Streptomyces
-
Hendlin, D. et al. Phosphonomycin, a new antibiotic produced by strains of Streptomyces. Science 166, 122-123 (1969).
-
(1969)
Science
, vol.166
, pp. 122-123
-
-
Hendlin, D.1
-
9
-
-
0017142363
-
Studies on new antimetabolite produced by microorganism 2-amino-5-phosphono-3-pentenoic acid, a new amino-acid from N-1409 substance, an antagonist of threonine
-
Park, B. K., Hirota, A. & Sakai, H. Studies on new antimetabolite produced by microorganism 2-amino-5-phosphono-3-pentenoic acid, a new amino-acid from N-1409 substance, an antagonist of threonine. Agric. Biol. Chem. 40, 1905-1906 (1976).
-
(1976)
Agric. Biol. Chem
, vol.40
, pp. 1905-1906
-
-
Park, B.K.1
Hirota, A.2
Sakai, H.3
-
10
-
-
0015530581
-
Metabolic products of microorganisms. 98. Phosphinothricin and phosphinothricyl-alanyl-analine
-
Bayer, E. et al. Metabolic products of microorganisms. 98. Phosphinothricin and phosphinothricyl-alanyl-analine. Helv. Chim. Acta 55, 224-239 (1972).
-
(1972)
Helv. Chim. Acta
, vol.55
, pp. 224-239
-
-
Bayer, E.1
-
11
-
-
34548379026
-
New ways to break an old bond: The bacterial carbon-phosphorus hydrolases and their role in biogeochemical phosphorus cycling
-
DOI 10.1111/j.1462-2920.2007.01397.x
-
Quinn, J. P., Kulakova, A. N., Cooley, N. A. & McGrath, J. W. New ways to break an old bond: the bacterial carbon-phosphorus hydrolases and their role in biogeochemical phosphorus cycling. Environ. Microbiol. 9, 2392-2400 (2007). This review describes phosphonate turnover in the marine environment and provides a bioinformatic analysis of the distribution of both C-P lyase and C-P hydrolases. (Pubitemid 47366673)
-
(2007)
Environmental Microbiology
, vol.9
, Issue.10
, pp. 2392-2400
-
-
Quinn, J.P.1
Kulakova, A.N.2
Cooley, N.A.3
McGrath, J.W.4
-
12
-
-
0023785036
-
Catalysis and thermodynamics of the phosphoenolpyruvate phosphonopyruvate rearrangement. Entry into the phosphonate class of naturally-occurring organo-phosphorus compounds
-
Bowman, E., McQueney, M., Barry, R. J. & Dunaway- Mariano, D. Catalysis and thermodynamics of the phosphoenolpyruvate phosphonopyruvate rearrangement. Entry into the phosphonate class of naturally-occurring organo-phosphorus compounds. J. Am. Chem. Soc. 110, 5575-5576 (1988).
-
(1988)
J. Am. Chem. Soc
, vol.110
, pp. 5575-5576
-
-
Bowman, E.1
McQueney, M.2
Barry, R.J.3
Dunaway-Mariano, D.4
-
13
-
-
0024299578
-
Phosphonate biosynthesis: Isolation of the enzyme responsible for the formation of a carbon-phosphorus bond
-
Seidel, H. M., Freeman, S., Seto, H. & Knowles, J. R. Phosphonate biosynthesis: isolation of the enzyme responsible for the formation of a carbon-phosphorus bond. Nature 335, 457-458 (1988).
-
(1988)
Nature
, vol.335
, pp. 457-458
-
-
Seidel, H.M.1
Freeman, S.2
Seto, H.3
Knowles, J.R.4
-
14
-
-
0142103330
-
The Phosphonopyruvate Decarboxylase from Bacteroides fragilis
-
DOI 10.1074/jbc.M305976200
-
Zhang, G. F., Dai, J. Y., Lu, Z. B. & Dunaway-Mariano, D. The phosphonopyruvate decarboxylase from Bacteroides fragilis. J. Biol. Chem. 278, 41302-41308 (2003). (Pubitemid 37280958)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.42
, pp. 41302-41308
-
-
Zhang, G.1
Dai, J.2
Lu, Z.3
Dunaway-Mariano, D.4
-
15
-
-
0024300794
-
Elucidation of the 2-aminoethylphosphonate biosynthetic pathway in Tetrahymena pyriformis
-
Barry, R. J., Bowman, E., McQueney, M. & Dunaway-Mariano, D. Elucidation of the 2-aminoethylphosphonate biosynthetic pathway in Tetrahymena pyriformis. Biochem. Biophys. Res. Commun. 153, 177-182 (1988).
-
(1988)
Biochem. Biophys. Res. Commun
, vol.153
, pp. 177-182
-
-
Barry, R.J.1
Bowman, E.2
McQueney, M.3
Dunaway-Mariano, D.4
-
16
-
-
77949915670
-
Global regulation by the seven-component Pi signaling system
-
Hsieh, Y. J. & Wanner, B. L. Global regulation by the seven-component Pi signaling system. Curr. Opin. Microbiol. 13, 198-203 (2010). This review provides a comprehensive overview of how E. coli detects environmental inorganic orthophosphate to regulate genes of the Pho regulon.
-
(2010)
Curr. Opin. Microbiol
, vol.13
, pp. 198-203
-
-
Hsieh, Y.J.1
Wanner, B.L.2
-
17
-
-
42149150462
-
The phosphate regulon and bacterial virulence: A regulatory network connecting phosphate homeostasis and pathogenesis
-
DOI 10.1111/j.1574-6976.2008.00101.x
-
Lamarche, M. G., Wanner, B. L., Crepin, S. & Harel, J. The phosphate regulon and bacterial virulence: a regulatory network connecting phosphate homeostasis and pathogenesis. FEMS Microbiol. Rev. 32, 461-473 (2008). (Pubitemid 351538744)
-
(2008)
FEMS Microbiology Reviews
, vol.32
, Issue.3
, pp. 461-473
-
-
Lamarche, M.G.1
Wanner, B.L.2
Crepin, S.3
Harel, J.4
-
18
-
-
33744797980
-
Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteobacteria
-
DOI 10.1093/nar/gkl365
-
Yuan, Z. C., Zaheer, R., Morton, R. & Finan, T. M. Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteobacteria. Nucleic Acids Res. 34, 2686-2697 (2006). (Pubitemid 43985631)
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.9
, pp. 2686-2697
-
-
Yuan, Z.-C.1
Zaheer, R.2
Morton, R.3
Finan, T.M.4
-
19
-
-
0030895003
-
The pst operon of Bacillus subtilis has a phosphate-regulated promoter and is involved in phosphate transport but not in regulation of the Pho regulon
-
Qi, Y., Kobayashi, Y. & Hulett, F. M. The pst operon of Bacillus subtilis has a phosphate-regulated promoter and is involved in phosphate transport but not in regulation of the Pho regulon. J. Bacteriol. 179, 2534-2539 (1997). (Pubitemid 27164551)
-
(1997)
Journal of Bacteriology
, vol.179
, Issue.8
, pp. 2534-2539
-
-
Qi, Y.1
Kobayashi, Y.2
Hulett, F.M.3
-
20
-
-
0028703434
-
Molecular genetics of carbon-phosphorus bond cleavage in bacteria
-
Wanner, B. L. Molecular genetics of carbon-phosphorus bond cleavage in bacteria. Biodegradation 5, 175-184 (1994).
-
(1994)
Biodegradation
, vol.5
, pp. 175-184
-
-
Wanner, B.L.1
-
21
-
-
0031055690
-
Utilization of organophosphonates by environmental microorganisms
-
McGrath, J. W., Ternan, N. G. & Quinn, J. P. Utilization of organophosphonates by environmental microorganisms. Lett. Appl. Microbiol. 24, 69-73 (1997). (Pubitemid 27064574)
-
(1997)
Letters in Applied Microbiology
, vol.24
, Issue.1
, pp. 69-73
-
-
McGrath, J.W.1
Ternan, N.G.2
Quinn, J.P.3
-
22
-
-
0023101749
-
Bacterial carbon-phosphorus lyase: Products, rates, and regulation of phosphonic and phosphinic acid metabolism
-
Wackett, L. P., Shames, S. L., Venditti, C. P. & Walsh, C. T. Bacterial carbon-phosphorus lyase: products, rates, and regulation of phosphonic and phosphinic acid metabolism. J. Bacteriol. 169, 710-717 (1987). (Pubitemid 17010886)
-
(1987)
Journal of Bacteriology
, vol.169
, Issue.2
, pp. 710-717
-
-
Wackett, L.P.1
Shames, S.L.2
Venditti, C.P.3
Walsh, C.T.4
-
23
-
-
0031771343
-
Review: Organophosphonates: Occurrence, synthesis and biodegradation by microorganisms
-
DOI 10.1023/A:1008848401799
-
Ternan, N. G., Mc Grath, J. W., Mc Mullan, G. & Quinn, J. P. Organophosphonates: occurrence, synthesis and biodegradation by microorganisms. World J. Microbiol. Biotechnol. 14, 635-647 (1998). (Pubitemid 28540010)
-
(1998)
World Journal of Microbiology and Biotechnology
, vol.14
, Issue.5
, pp. 635-647
-
-
Ternan, N.G.1
Mc Grath, J.W.2
Mc Mullan, G.3
Quinn, J.P.4
-
24
-
-
0025217032
-
Molecular biology of carbon-phosphorus bond cleavage. Cloning and sequencing of the phn (psiD) genes involved in alkylphosphonate uptake and C-P lyase activity in Escherichia coli B
-
Chen, C. M., Ye, Q. Z., Zhu, Z. M., Wanner, B. L. & Walsh, C. T. Molecular biology of carbon-phosphorus bond cleavage. Cloning and sequencing of the phn (psiD) genes involved in alkylphosphonate uptake and C-P lyase activity in Escherichia coli B. J. Biol. Chem. 265, 4461-4471 (1990).
-
(1990)
J. Biol. Chem
, vol.265
, pp. 4461-4471
-
-
Chen, C.M.1
Ye, Q.Z.2
Zhu, Z.M.3
Wanner, B.L.4
Walsh, C.T.5
-
25
-
-
0031859636
-
Phosphate-independent expression of the carbon-phosphorus lyase activity of Escherichia coli
-
DOI 10.1007/s002530051215
-
Yakovleva, G. M., Kim, S. K. & Wanner, B. L. Phosphate-independent expression of the carbon-phosphorus lyase activity of Escherichia coli. Appl. Microbiol. Biotechnol. 49, 573-578 (1998). (Pubitemid 28267250)
-
(1998)
Applied Microbiology and Biotechnology
, vol.49
, Issue.5
, pp. 573-578
-
-
Yakovleva, G.M.1
Kim, S.K.2
Wanner, B.L.3
-
26
-
-
0025819276
-
Metabolites associated with organophosphonate C-P bond-cleavage: Chemical synthesis and microbial-degradation of [32P]-ethylphosphonic acid
-
Avila, L. Z., Draths, K. M. & Frost, J. W. Metabolites associated with organophosphonate C-P bond-cleavage: chemical synthesis and microbial-degradation of [32P]-ethylphosphonic acid. Bioorg. Med. Chem. Lett. 1, 51-54 (1991).
-
(1991)
Bioorg. Med. Chem. Lett
, vol.1
, pp. 51-54
-
-
Avila, L.Z.1
Draths, K.M.2
Frost, J.W.3
-
27
-
-
84867068020
-
Catabolism and detoxification of 1-aminoalkylphosphonic acids: N-acetylation by the phnO gene product
-
Hove-Jensen, B., McSorley, F. R. & Zechel, D. L. Catabolism and detoxification of 1-aminoalkylphosphonic acids: N-acetylation by the phnO gene product. PLoS ONE 7, e46416 (2012).
-
(2012)
PLoS ONE
, vol.7
-
-
Hove-Jensen, B.1
McSorley, F.R.2
Zechel, D.L.3
-
28
-
-
80053600609
-
Structure and mechanism of PhnP, a phosphodiesterase of the carbon-phosphorus lyase pathway
-
He, S. M. et al. Structure and mechanism of PhnP, a phosphodiesterase of the carbon-phosphorus lyase pathway. Biochemistry 50, 8603-8615 (2011).
-
(2011)
Biochemistry
, vol.50
, pp. 8603-8615
-
-
He, S.M.1
-
29
-
-
79960983742
-
Five phosphonate operon gene products as components of a multi-subunit complex of the carbon-phosphorus lyase pathway
-
Jochimsen, B. et al. Five phosphonate operon gene products as components of a multi-subunit complex of the carbon-phosphorus lyase pathway. Proc. Natl Acad. Sci. USA 108, 11393-11398 (2011). This article is the first to report the purification of a soluble complex of the five proteins central to the reaction catalysed by bacterial C-P lyase.
-
(2011)
Proc. Natl Acad. Sci. USA
, vol.108
, pp. 11393-11398
-
-
Jochimsen, B.1
-
30
-
-
84355162021
-
Intermediates in the transformation of phosphonates to phosphate by bacteria
-
Kamat, S. S., Williams, H. J. & Raushel, F. M. Intermediates in the transformation of phosphonates to phosphate by bacteria. Nature 480, 570-573 (2011). This study is the first to achieve C-P lyase activity in vitro, and the authors propose an enzymatic mechanism for this complex reaction.
-
(2011)
Nature
, vol.480
, pp. 570-573
-
-
Kamat, S.S.1
Williams, H.J.2
Raushel, F.M.3
-
31
-
-
84863390146
-
Answers to the carbon-phosphorus lyase conundrum
-
Zhang, Q. & van der Donk, W. A. Answers to the carbon-phosphorus lyase conundrum. Chembiochem 13, 627-629 (2012).
-
(2012)
Chembiochem
, vol.13
, pp. 627-629
-
-
Zhang, Q.1
Van Der Donk, W.A.2
-
32
-
-
38949184271
-
Differential regulation of high-affinity phosphate transport systems of Mycobacterium smegmatis: Identification of PhnF, a repressor of the phnDCE operon
-
DOI 10.1128/JB.01764-07
-
Gebhard, S. & Cook, G. M. Differential regulation of high-affinity phosphate transport systems of Mycobacterium smegmatis: identification of PhnF, a repressor of the phnDCE operon. J. Bacteriol. 190, 1335-1343 (2008). (Pubitemid 351215015)
-
(2008)
Journal of Bacteriology
, vol.190
, Issue.4
, pp. 1335-1343
-
-
Gebhard, S.1
Cook, G.M.2
-
33
-
-
79952596401
-
Physiological role of phnP-specified phosphoribosyl cyclic phosphodiesterase in catabolism of organophosphonic acids by the carbon-phosphorus lyase pathway
-
Hove-Jensen, B., McSorley, F. R. & Zechel, D. L. Physiological role of phnP-specified phosphoribosyl cyclic phosphodiesterase in catabolism of organophosphonic acids by the carbon-phosphorus lyase pathway. J. Am. Chem. Soc. 133, 3617-3624 (2011).
-
(2011)
J. Am. Chem. Soc
, vol.133
, pp. 3617-3624
-
-
Hove-Jensen, B.1
McSorley, F.R.2
Zechel, D.L.3
-
34
-
-
84875038227
-
The genes and enzymes of phosphonate metabolism by bacteria, and their distribution in the marine environment
-
Villarreal-Chiu, J. F., Quinn, J. P. & McGrath, J. W. The genes and enzymes of phosphonate metabolism by bacteria, and their distribution in the marine environment. Front. Microbiol. 3, 19 (2012).
-
(2012)
Front. Microbiol
, vol.3
, pp. 19
-
-
Villarreal-Chiu, J.F.1
Quinn, J.P.2
McGrath, J.W.3
-
35
-
-
0026285717
-
Evidence for two distinct phosphonate-degrading enzymes (C-P lyases) in Arthrobacter sp. GLP-1
-
Kertesz, M., Elgorriaga, A. & Amrhein, N. Evidence for two distinct phosphonate-degrading enzymes (C-P lyases) in Arthrobacter sp. GLP-1. Biodegradation 2, 53-59 (1991).
-
(1991)
Biodegradation
, vol.2
, pp. 53-59
-
-
Kertesz, M.1
Elgorriaga, A.2
Amrhein, N.3
-
36
-
-
84856286561
-
Distribution of glyphosate and methylphosphonate catabolism systems in soil bacteria Ochrobactrum anthropi and Achromobacter sp
-
Sviridov, A. V. et al. Distribution of glyphosate and methylphosphonate catabolism systems in soil bacteria Ochrobactrum anthropi and Achromobacter sp. Appl. Microbiol. Biotechnol. 93, 787-796 (2012).
-
(2012)
Appl. Microbiol. Biotechnol
, vol.93
, pp. 787-796
-
-
Sviridov, A.V.1
-
37
-
-
30144433545
-
Phosphonate utilization by the globally important marine diazotroph Trichodesmium
-
DOI 10.1038/nature04203
-
Dyhrman, S. T. et al. Phosphonate utilization by the globally important marine diazotroph Trichodesmium. Nature 439, 68-71 (2006). This report describes the induction of C-P lyase genes in T. erythraeum str. IMS101 under low-phosphate conditions. Expression of these genes might help to explain the prevalence of Trichodesmium spp. in low-phosphate, oligotrophic marine systems. (Pubitemid 43053629)
-
(2006)
Nature
, vol.439
, Issue.7072
, pp. 68-71
-
-
Dyhrman, S.T.1
Chappell, P.D.2
Haley, S.T.3
Moffett, J.W.4
Orchard, E.D.5
Waterbury, J.B.6
Webb, E.A.7
-
38
-
-
50149109783
-
Aerobic production of methane in the sea
-
Karl, D. M. et al. Aerobic production of methane in the sea. Nature Geosci. 1, 473-478 (2008). This work shows that C-P lyase catalyses the aerobic production of methane from methylphosphonate in phosphate-stressed marine waters, thereby uncovering an additional source of methane efflux from the oceans.
-
(2008)
Nature Geosci
, vol.1
, pp. 473-478
-
-
Karl, D.M.1
-
39
-
-
0000467358
-
Use of hydrous iron(iii) oxide in a concentration step for the determination of trace amounts of organophosphorus compounds in aqueous-solutions
-
Hori, T. & Sugiyama, M. Use of hydrous iron(iii) oxide in a concentration step for the determination of trace amounts of organophosphorus compounds in aqueous-solutions. Analyst 117, 893-897 (1992).
-
(1992)
Analyst
, vol.117
, pp. 893-897
-
-
Hori, T.1
Sugiyama, M.2
-
40
-
-
0035132411
-
31P-NMR spectroscopy: Coastal and hydrothermal vent invertebrates
-
DOI 10.1016/S1096-4959(00)00310-9, PII S1096495900003109
-
Quin, L. D. & Quin, G. S. Screening for carbon-bound phosphorus in marine animals by high-resolution P-31-NMR spectroscopy: coastal and hydrothermal vent invertebrates. Comp. Biochem. Physiol. B Biochem. Mol. Biol. 128, 173-185 (2001). (Pubitemid 32157508)
-
(2001)
Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology
, vol.128
, Issue.1
, pp. 173-185
-
-
Quin, L.D.1
Quin, G.S.2
-
41
-
-
0032549018
-
Isolation and characterization of the carbon-phosphorus bond-forming enzyme phosphoenolpyruvate mutase from the mollusk Mytilus edulis
-
DOI 10.1074/jbc.273.8.4443
-
Kim, A., Kim, J., Martin, B. M. & Dunaway- Mariano, D. Isolation and characterization of the carbon-phosphorus bond-forming enzyme phosphoenolpyruvate mutase from the mollusk Mytilus edulis. J. Biol. Chem. 273, 4443-4448 (1998). (Pubitemid 28103182)
-
(1998)
Journal of Biological Chemistry
, vol.273
, Issue.8
, pp. 4443-4448
-
-
Kim, A.1
Kim, J.2
Martin, B.M.3
Dunaway-Mariano, D.4
-
42
-
-
49949132369
-
The breakdown of aminoethylphosphonate by cell-free extracts of Bacillus cereus
-
La Nauze, J. M. & Rosenberg, H. The breakdown of aminoethylphosphonate by cell-free extracts of Bacillus cereus. Biochim. Biophys. Acta 148, 811-813 (1967). This article provides the first description of the microbial degradation of 2-AEP.
-
(1967)
Biochim. Biophys. Acta
, vol.148
, pp. 811-813
-
-
La Nauze, J.M.1
Rosenberg, H.2
-
43
-
-
0014681185
-
Transamination of 2-aminoethylphosphonic acid by Pseudomonas aeruginosa
-
Lacoste, A. M. & Neuzil, E. Transamination of 2-aminoethylphosphonic acid by Pseudomonas aeruginosa. C. R. Acad. Sci. Hebd. Seances Acad. Sci. D 269, 254-257 (1969).
-
(1969)
C. R. Acad. Sci. Hebd. Seances Acad. Sci. D
, vol.269
, pp. 254-257
-
-
Lacoste, A.M.1
Neuzil, E.2
-
44
-
-
0017410535
-
Aldolase like imine formation in the mechanism of action of phosphonoacetaldehyde hydrolase
-
La Nauze, J. M., Coggins, J. R. & Dixon, H. B. Aldolase-like imine formation in the mechanism of action of phosphonoacetaldehyde hydrolase. Biochem. J. 165, 409-411 (1977). (Pubitemid 8154802)
-
(1977)
Biochemical Journal
, vol.165
, Issue.2
, pp. 409-411
-
-
La Nauze, J.M.1
Coggins, J.R.2
Dixon, H.B.F.3
-
45
-
-
0024465789
-
Phosphonoacetaldehyde hydrolase from Pseudomonas aeruginosa: Purification properties and comparison with Bacillus cereus enzyme
-
DOI 10.1016/0167-4838(89)90186-6
-
Dumora, C., Lacoste, A. M. & Cassaigne, A. Phosphonoacetaldehyde hydrolase from Pseudomonas aeruginosa: purification, properties and comparison with Bacillus cereus enzyme. Biochim. Biophys. Acta 997, 193-198 (1989). (Pubitemid 19217037)
-
(1989)
Biochimica et Biophysica Acta - Protein Structure and Molecular Enzymology
, vol.997
, Issue.3
, pp. 193-198
-
-
Dumora, C.1
Lacoste, A.-M.2
Cassaigne, A.3
-
46
-
-
0034730072
-
The crystal structure of Bacillus cereus phosphonoacetaldehyde hydrolase: Insight into catalysis of phosphorus bond cleavage and catalytic diversification within the had enzyme superfamily
-
DOI 10.1021/bi001171j
-
Morais, M. C. et al. The crystal structure of Bacillus cereus phosphonoacetaldehyde hydrolase: insight into catalysis of phosphorus bond cleavage and catalytic diversification within the HAD enzyme superfamily. Biochemistry 39, 10385-10396 (2000). (Pubitemid 30655914)
-
(2000)
Biochemistry
, vol.39
, Issue.34
, pp. 10385-10396
-
-
Morais, M.C.1
Zhang, W.2
Baker, A.S.3
Zhang, G.4
Dunaway-Mariano, D.5
Allen, K.N.6
-
47
-
-
0032581010
-
Insights into the mechanism of catalysis by the P-C bond-cleaving enzyme phosphonoacetaldehyde hydrolase derived from gene sequence analysis and mutagenesis
-
DOI 10.1021/bi972677d
-
Baker, A. S. et al. Insights into the mechanism of catalysis by the P-C bond-cleaving enzyme phosphonoacetaldehyde hydrolase derived from gene sequence analysis and mutagenesis. Biochemistry 37, 9305-9315 (1998). (Pubitemid 28307684)
-
(1998)
Biochemistry
, vol.37
, Issue.26
, pp. 9305-9315
-
-
Baker, A.S.1
Ciocci, M.J.2
Metcalf, W.W.3
Kim, J.4
Babbitt, P.C.5
Wanner, B.L.6
Martin, B.M.7
Dunaway-Mariano, D.8
-
48
-
-
0028801167
-
Molecular-cloning mapping, and regulation of Pho regulon genes for phosphonate breakdown by the phosphonatase pathway of Salmonella typhimurium LT2
-
Jiang, W. H., Metcalf, W. W., Lee, K. S. & Wanner, B. L. Molecular-cloning, mapping, and regulation of Pho regulon genes for phosphonate breakdown by the phosphonatase pathway of Salmonella typhimurium LT2. J. Bacteriol. 177, 6411-6421 (1995).
-
(1995)
J. Bacteriol
, vol.177
, pp. 6411-6421
-
-
Jiang, W.H.1
Metcalf, W.W.2
Lee, K.S.3
Wanner, B.L.4
-
49
-
-
0031716877
-
Phosphate starvation-independent 2-aminoethylphosphonic acid biodegradation in a newly isolated strain of pseudomonas putida, NG2
-
Ternan, N. G. & Quinn, J. P. Phosphate starvation-independent 2-aminoethylphosphonic acid biodegradation in a newly isolated strain of Pseudomonas putida NG2. Syst. Appl. Microbiol. 21, 346-352 (1998). (Pubitemid 28456838)
-
(1998)
Systematic and Applied Microbiology
, vol.21
, Issue.3
, pp. 346-352
-
-
Ternan, N.G.1
Quinn, J.P.2
-
50
-
-
0028791603
-
The purification and properties of phosphonoacetate hydrolase, a novel carbon-phosphorus bond-cleaving enzyme from Pseudomonas fluorescens 23F Eur
-
McGrath, J. W., Wisdom, G. B., McMullan, G., Larkin, M. J. & Quinn, J. P. The purification and properties of phosphonoacetate hydrolase, a novel carbon-phosphorus bond-cleaving enzyme from Pseudomonas fluorescens 23F Eur. J. Biochem. 234, 225-230 (1995).
-
(1995)
J. Biochem
, vol.234
, pp. 225-230
-
-
McGrath, J.W.1
Wisdom, G.B.2
McMullan, G.3
Larkin, M.J.4
Quinn, J.P.5
-
51
-
-
79955411030
-
Divergence of chemical function in the alkaline phosphatase superfamily: Structure and mechanism of the P-C bond cleaving enzyme phosphonoacetate hydrolase
-
Kim, A. et al. Divergence of chemical function in the alkaline phosphatase superfamily: structure and mechanism of the P-C bond cleaving enzyme phosphonoacetate hydrolase. Biochemistry 50, 3481-3494 (2011).
-
(2011)
Biochemistry
, vol.50
, pp. 3481-3494
-
-
Kim, A.1
-
52
-
-
80055084842
-
Structural and mechanistic insights into C-P bond hydrolysis by phosphonoacetate hydrolase
-
Agarwal, V., Borisova, S. A., Metcalf, W. W., van der Donk, W. A. & Nair, S. K. Structural and mechanistic insights into C-P bond hydrolysis by phosphonoacetate hydrolase. Chem. Biol. 18, 1230-1240 (2011).
-
(2011)
Chem. Biol
, vol.18
, pp. 1230-1240
-
-
Agarwal, V.1
Borisova, S.A.2
Metcalf, W.W.3
Van Der Donk, W.A.4
Nair, S.K.5
-
53
-
-
0026684624
-
Detection of a novel carbon-phosphorus bond-cleavage activity in cell-free-extracts of an environmental Pseudomonas fluorescens isolate
-
McMullan, G. & Quinn, J. P. Detection of a novel carbon-phosphorus bond-cleavage activity in cell-free-extracts of an environmental Pseudomonas fluorescens isolate. Biochem. Biophys. Res. Commun. 184, 1022-1027 (1992).
-
(1992)
Biochem. Biophys. Res. Commun
, vol.184
, pp. 1022-1027
-
-
McMullan, G.1
Quinn, J.P.2
-
54
-
-
0026554431
-
Metabolism of phosphonoacetate as the sole carbon and phosphorus source by an environmental bacterial isolate
-
McMullan, G., Harrington, F. & Quinn, J. P. Metabolism of phosphonoacetate as the sole carbon and phosphorus source by an environmental bacterial isolate. Appl. Environ. Microbiol. 58, 1364-1366 (1992).
-
(1992)
Appl. Environ. Microbiol
, vol.58
, pp. 1364-1366
-
-
McMullan, G.1
Harrington, F.2
Quinn, J.P.3
-
55
-
-
77953596410
-
The construction of a whole-cell biosensor for phosphonoacetate, based on the LysR-like transcriptional regulator PhnR from Pseudomonas fluorescens 23F
-
Kulakova, A. N., Kulakov, L. A., McGrath, J. W. & Quinn, J. P. The construction of a whole-cell biosensor for phosphonoacetate, based on the LysR-like transcriptional regulator PhnR from Pseudomonas fluorescens 23F. Microb. Biotechnol. 2, 234-240 (2009).
-
(2009)
Microb. Biotechnol
, vol.2
, pp. 234-240
-
-
Kulakova, A.N.1
Kulakov, L.A.2
McGrath, J.W.3
Quinn, J.P.4
-
56
-
-
0035031803
-
Structural and functional analysis of the phosphonoacetate hydrolase (phnA) gene region in Pseudomonas fluorescens 23F
-
DOI 10.1128/JB.183.11.3268-3275.2001
-
Kulakova, A. N. et al. Structural and functional analysis of the phosphonoacetate hydrolase (phnA) gene region in Pseudomonas fluorescens 23F. J. Bacteriol. 183, 3268-3275 (2001). (Pubitemid 32448589)
-
(2001)
Journal of Bacteriology
, vol.183
, Issue.11
, pp. 3268-3275
-
-
Kulakova, A.N.1
Kulakov, L.A.2
Akulenko, N.V.3
Ksenzenko, V.N.4
Hamilton, J.T.G.5
Quinn, J.P.6
-
57
-
-
79959360686
-
Genetic and biochemical characterization of a pathway for the degradation of 2-aminoethylphosphonate in Sinorhizobium meliloti 1021
-
Borisova, S. A. et al. Genetic and biochemical characterization of a pathway for the degradation of 2-aminoethylphosphonate in Sinorhizobium meliloti 1021. J. Biol. Chem. 286, 22283-22290 (2011).
-
(2011)
J. Biol. Chem
, vol.286
, pp. 22283-22290
-
-
Borisova, S.A.1
-
58
-
-
79958280148
-
Phosphonoacetate biosynthesis: In vitro detection of a novel NADP+ dependent phosphonoacetaldehyde oxidizing activity in cell extracts of a marine Roseobacter
-
Cooley, N. A. et al. Phosphonoacetate biosynthesis: in vitro detection of a novel NADP+ dependent phosphonoacetaldehyde oxidizing activity in cell extracts of a marine Roseobacter. Microbiology 80, 335-340 (2011).
-
(2011)
Microbiology
, vol.80
, pp. 335-340
-
-
Cooley, N.A.1
-
59
-
-
73349117182
-
Widespread known and novel phosphonate utilization pathways in marine bacteria revealed by functional screening and metagenomic analyses
-
Martinez, A., Tyson, G. W. & DeLong, E. F. Widespread known and novel phosphonate utilization pathways in marine bacteria revealed by functional screening and metagenomic analyses. Environ. Microbiol. 12, 222-238 (2010).
-
(2010)
Environ. Microbiol
, vol.12
, pp. 222-238
-
-
Martinez, A.1
Tyson, G.W.2
Delong, E.F.3
-
60
-
-
84861395902
-
PhnY and PhnZ comprise a new oxidative pathway for enzymatic cleavage of a carbon- phosphorus bond
-
McSorley, F. R. et al. PhnY and PhnZ comprise a new oxidative pathway for enzymatic cleavage of a carbon- phosphorus bond. J. Am. Chem. Soc. 134, 8364-8367 (2012).
-
(2012)
J. Am. Chem. Soc
, vol.134
, pp. 8364-8367
-
-
McSorley, F.R.1
-
61
-
-
13844253483
-
Phosphonate catabolism by Campylobacter spp
-
Mendz, G. L., Megraud, F. & Korolik, V. Phosphonate catabolism by Campylobacter spp. Arch. Microbiol. 183, 113-120 (2005).
-
(2005)
Arch. Microbiol
, vol.183
, pp. 113-120
-
-
Mendz, G.L.1
Megraud, F.2
Korolik, V.3
-
62
-
-
72349095332
-
Phosphonate metabolism in Helicobacter pylori
-
Ford, J. L., Kaakoush, N. O. & Mendz, G. L. Phosphonate metabolism in Helicobacter pylori. Antonie van Leeuwenhooek 97, 51-60 (2010).
-
(2010)
Antonie Van Leeuwenhooek
, vol.97
, pp. 51-60
-
-
Ford, J.L.1
Kaakoush, N.O.2
Mendz, G.L.3
-
63
-
-
78650625847
-
Alternative pathways for phosphonate metabolism in thermophilic cyanobacteria from microbial mats
-
Gomez-Garcia, M. R., Davison, M., Blain-Hartnung, M., Grossman, A. R. & Bhaya, D. Alternative pathways for phosphonate metabolism in thermophilic cyanobacteria from microbial mats. ISME J. 5, 141-149 (2011).
-
(2011)
ISME J
, vol.5
, pp. 141-149
-
-
Gomez-Garcia, M.R.1
Davison, M.2
Blain-Hartnung, M.3
Grossman, A.R.4
Bhaya, D.5
-
64
-
-
0019331352
-
Metabolism of 2-amino-3-phosphono[3-14C]propionic acid in cell-free preparations of Tetrahymena
-
Horigane, A., Horiguchi, M. & Matsumoto, T. Metabolism of 2-amino-3-phosphono[3-14C]propionic acid in cell-free preparations of Tetrahymena. Biochim. Biophys. Acta 618, 383-388 (1980).
-
(1980)
Biochim. Biophys. Acta
, vol.618
, pp. 383-388
-
-
Horigane, A.1
Horiguchi, M.2
Matsumoto, T.3
-
65
-
-
0031746836
-
Phosphoenolpyruvate phosphomutase activity in an L-phosphonoalanine- mineralizing strain of Burkholderia cepacia
-
Ternan, N. G., McGrath, J. W. & Quinn, J. P. Phosphoenolpyruvate phosphomutase activity in an l-phosphonoalanine-mineralizing strain of Burkholderia cepacia. Appl. Environ. Microbiol. 64, 2291-2294 (1998). (Pubitemid 28252804)
-
(1998)
Applied and Environmental Microbiology
, vol.64
, Issue.6
, pp. 2291-2294
-
-
Ternan, N.G.1
McGrath, J.W.2
Quinn, J.P.3
-
66
-
-
59349117794
-
Expression of the phosphonoalanine-degradative gene cluster from Variovorax sp. Pal2 is induced by growth on phosphonoalanine and phosphonopyruvate
-
Kulakova, A. N. et al. Expression of the phosphonoalanine-degradative gene cluster from Variovorax sp. Pal2 is induced by growth on phosphonoalanine and phosphonopyruvate. FEMS Microbiol. Lett. 292, 100-106 (2009).
-
(2009)
FEMS Microbiol. Lett
, vol.292
, pp. 100-106
-
-
Kulakova, A.N.1
-
67
-
-
0037931360
-
The purification and characterization of phosphonopyruvate hydrolase, a novel carbon-phosphorus bond cleavage enzyme from Variovorax sp. Pal2
-
DOI 10.1074/jbc.M301871200
-
Kulakova, A. N., Wisdom, G. B., Kulakov, L. A. & Quinn, J. P. The purification and characterization of phosphonopyruvate hydrolase, a novel carbon-phosphorus bond cleavage enzyme from Variovorax sp. Pal2. J. Biol. Chem. 278, 23426-23431 (2003). (Pubitemid 36830159)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.26
, pp. 23426-23431
-
-
Kulakova, A.N.1
Wisdom, G.B.2
Kulakov, L.A.3
Quinn, J.P.4
-
68
-
-
33749010624
-
Structure and kinetics of phosphonopyruvate hydrolase from Voriovorax sp. Pal2: New insight into the divergence of catalysis within the pep mutase/isocitrate lyase superfamily
-
DOI 10.1021/bi061208l
-
Chen, C. C. H. et al. Structure and kinetics of phosphonopyruvate hydrolase from Variovorax sp. Pal2: new insight into the divergence of catalysis within the PEP mutase/isocitrate lyase superfamily. Biochemistry 45, 11491-11504 (2006). (Pubitemid 44453997)
-
(2006)
Biochemistry
, vol.45
, Issue.38
, pp. 11491-11504
-
-
Chen, C.C.H.1
Han, Y.2
Niu, W.3
Kulakova, A.N.4
Howard, A.5
Quinn, J.P.6
Dunaway-Mariano, D.7
Herzberg, O.8
-
69
-
-
0031965212
-
Biodegradation of phosphonomycin by Rhizobium huakuii PMY1
-
McGrath, J. W., Hammerschmidt, F. & Quinn, J. P. Biodegradation of phosphonomycin by Rhizobium huakuii PMY1. Appl. Environ. Microbiol. 64, 356-358 (1998). (Pubitemid 28040338)
-
(1998)
Applied and Environmental Microbiology
, vol.64
, Issue.1
, pp. 356-358
-
-
Mcgrath, J.W.1
Hammerschmidt, F.2
Quinn, J.P.3
-
70
-
-
64549104585
-
Studies on the biodegradation of fosfomycin: Growth of Rhizobium huakuii PMY1 on possible intermediates synthesised chemically
-
McGrath, J. W., Hammerschmidt, F., Preusser, W., Quinn, J. P. & Schweifer, A. Studies on the biodegradation of fosfomycin: growth of Rhizobium huakuii PMY1 on possible intermediates synthesised chemically. Org. Biomol. Chem. 7, 1944-1953 (2009).
-
(2009)
Org. Biomol. Chem
, vol.7
, pp. 1944-1953
-
-
McGrath, J.W.1
Hammerschmidt, F.2
Preusser, W.3
Quinn, J.P.4
Schweifer, A.5
-
71
-
-
81255173261
-
Studies on the biodegradation of fosfomycin: Synthesis of 13C-labeled intermediates, feeding experiments with Rhizobium huakuii PMY1, and isolation of labeled amino acids from cell mass by HPLC
-
McGrath, J. W. et al. Studies on the biodegradation of fosfomycin: synthesis of 13C-labeled intermediates, feeding experiments with Rhizobium huakuii PMY1, and isolation of labeled amino acids from cell mass by HPLC. Chemistry 17, 13341-13348 (2011).
-
(2011)
Chemistry
, vol.17
, pp. 13341-13348
-
-
McGrath, J.W.1
-
72
-
-
33847706072
-
The oceanic phosphorus cycle
-
DOI 10.1021/cr0503613
-
Paytan, A. & McLaughlin, K. The oceanic phosphorus cycle. Chem. Rev. 107, 563-576 (2007). (Pubitemid 46381033)
-
(2007)
Chemical Reviews
, vol.107
, Issue.2
, pp. 563-576
-
-
Paytan, A.1
McLaughlin, K.2
-
73
-
-
4944233293
-
Phosphonates and particulate organic phosphorus cycling in an anoxic marine basin
-
Benitez-Nelson, C. R., O'Neill, L., Kolowith, L. C., Pellechia, P. & Thunell, R. Phosphonates and particulate organic phosphorus cycling in an anoxic marine basin. Limnol. Oceanogr. 49, 1593-1604 (2004). (Pubitemid 39320752)
-
(2004)
Limnology and Oceanography
, vol.49
, Issue.5
, pp. 1593-1604
-
-
Benitez-Nelson, C.R.1
O'Neill, L.2
Kolowith, L.C.3
Pellechia, P.4
Thunell, R.5
-
74
-
-
0035073170
-
Composition and cycling of marine organic phosphorus
-
Kolowith, L. C., Ingall, E. D. & Benner, R. Composition and cycling of marine organic phosphorus. Limnol. Oceanogr. 46, 309-320 (2001). (Pubitemid 32281607)
-
(2001)
Limnology and Oceanography
, vol.46
, Issue.2
, pp. 309-320
-
-
Kolowith, L.C.1
Ingall, E.D.2
Benner, R.3
-
75
-
-
84868369211
-
Streamlining and core genome conservation among highly divergent members of the SAR11 clade
-
Grote, J. et al. Streamlining and core genome conservation among highly divergent members of the SAR11 clade. mBio 3, e00252-12 (2012).
-
(2012)
MBio
, vol.3
, pp. 00252-312
-
-
Grote, J.1
-
76
-
-
18544407281
-
Bioavailability of dissolved organic phosphorus in the euphotic zone at Station ALOHA, North Pacific Subtropical Gyre
-
Bjorkman, K. M. & Karl, D. M. Bioavailability of dissolved organic phosphorus in the euphotic zone at station ALOHA, North Pacific Subtropical Gyre. Limnol. Oceanogr. 48, 1049-1057 (2003). (Pubitemid 36631946)
-
(2003)
Limnology and Oceanography
, vol.48
, Issue.3
, pp. 1049-1057
-
-
Bjorkman, K.M.1
Karl, D.M.2
-
77
-
-
78651355676
-
Depth distributions of alkaline phosphatase and phosphonate utilization genes in the North Pacific Subtropical Gyre
-
Luo, H. W., Zhang, H. M., Long, R. A. & Benner, R. Depth distributions of alkaline phosphatase and phosphonate utilization genes in the North Pacific Subtropical Gyre. Aquat. Microb. Ecol. 62, 61-69 (2011).
-
(2011)
Aquat. Microb. Ecol
, vol.62
, pp. 61-69
-
-
Luo, H.W.1
Zhang, H.M.2
Long, R.A.3
Benner, R.4
-
78
-
-
75849143326
-
Subcellular localization of marine bacterial alkaline phosphatases
-
Luo, H., Benner, R., Long, R. A. & Hu, J. Subcellular localization of marine bacterial alkaline phosphatases. Proc. Natl Acad. Sci. USA 106, 21219-21223 (2009).
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 21219-21223
-
-
Luo, H.1
Benner, R.2
Long, R.A.3
Hu, J.4
-
79
-
-
0032482346
-
Marine phosphorus is selectively remineralized
-
Clark, L. L., Ingall, E. D. & Benner, R. Marine phosphorus is selectively remineralized. Nature 393, 426-426 (1998).
-
(1998)
Nature
, vol.393
, pp. 426-426
-
-
Clark, L.L.1
Ingall, E.D.2
Benner, R.3
-
80
-
-
70349761583
-
A microbial source of phosphonates in oligotrophic marine systems
-
Dyhrman, S. T., Benitez-Nelson, C. R., Orchard, E. D., Haley, S. T. & Pellechia, P. J. A microbial source of phosphonates in oligotrophic marine systems. Nature Geosci. 2, 696-699 (2009).
-
(2009)
Nature Geosci
, vol.2
, pp. 696-699
-
-
Dyhrman, S.T.1
Benitez-Nelson, C.R.2
Orchard, E.D.3
Haley, S.T.4
Pellechia, P.J.5
-
81
-
-
65349154502
-
Detection and expression of the phosphonate transporter gene phnD in marine and freshwater picocyanobacteria
-
Ilikchyan, I. N., McKay, R. M. L., Zehr, J. P., Dyhrman, S. T. & Bullerjahn, G. S. Detection and expression of the phosphonate transporter gene phnD in marine and freshwater picocyanobacteria. Environ. Microbiol. 11, 1314-1324 (2009).
-
(2009)
Environ. Microbiol
, vol.11
, pp. 1314-1324
-
-
Ilikchyan, I.N.1
McKay, R.M.L.2
Zehr, J.P.3
Dyhrman, S.T.4
Bullerjahn, G.S.5
-
82
-
-
58149240855
-
Potential for phosphonoacetate utilization by marine bacteria in temperate coastal waters
-
Gilbert, J. A. et al. Potential for phosphonoacetate utilization by marine bacteria in temperate coastal waters. Environ. Microbiol. 11, 111-125 (2009).
-
(2009)
Environ. Microbiol
, vol.11
, pp. 111-125
-
-
Gilbert, J.A.1
-
83
-
-
77149122718
-
Evidence for phosphonate usage in the coral holobiont
-
Thomas, S. et al. Evidence for phosphonate usage in the coral holobiont. ISME J. 4, 459-461 (2010).
-
(2010)
ISME J
, vol.4
, pp. 459-461
-
-
Thomas, S.1
-
84
-
-
84865535718
-
Synthesis of methylphosphonic acid by marine microbes: A source for methane in the aerobic ocean
-
Metcalf, W. W. et al. Synthesis of methylphosphonic acid by marine microbes: a source for methane in the aerobic ocean. Science 337, 1104-1107 (2012). This paper provides evidence for the production of methylphosphonate by the marine archaeon N. maritimus, a finding that might help to further resolve the oceanic methane paradox.
-
(2012)
Science
, vol.337
, pp. 1104-1107
-
-
Metcalf, W.W.1
-
85
-
-
0038739203
-
Environmental chemistry of phosphonates
-
DOI 10.1016/S0043-1354(03)00079-4
-
Nowack, B. Environmental chemistry of phosphonates. Water Res. 37, 2533-2546 (2003). (Pubitemid 36561459)
-
(2003)
Water Research
, vol.37
, Issue.11
, pp. 2533-2546
-
-
Nowack, B.1
-
87
-
-
0019473828
-
Phosphonates as analogs of biological phosphates
-
Blackburn, G. M. Phosphonates as analogs of biological phosphates. Chem. Ind. 7, 134-138 (1981).
-
(1981)
Chem. Ind
, vol.7
, pp. 134-138
-
-
Blackburn, G.M.1
-
88
-
-
41349085389
-
Glyphosate: A once-in-a-century herbicide
-
DOI 10.1002/ps.1518
-
Duke, S. O. & Powles, S. B. Glyphosate: a once-in-a-century herbicide. Pest Manage. Sci. 64, 319-325 (2008). (Pubitemid 351449451)
-
(2008)
Pest Management Science
, vol.64
, Issue.4
, pp. 319-325
-
-
Duke, S.O.1
Powles, S.B.2
-
89
-
-
84866866076
-
Glyphosate in northern ecosystems
-
Helander, M., Saloniemi, I. & Saikkonen, K. Glyphosate in northern ecosystems. Trends Plant Sci. 17, 569-574 (2012).
-
(2012)
Trends Plant Sci
, vol.17
, pp. 569-574
-
-
Helander, M.1
Saloniemi, I.2
Saikkonen, K.3
|