Distribution of glyphosate and methylphosphonate catabolism systems in soil bacteria Ochrobactrum anthropi and Achromobacter sp

Applied Microbiology and Biotechnology

Volumn 93, Issue 2, 2012, Pages 787-796

  Sviridov, Alexey V ^a   Shushkova, Tatyana V ^a   Zelenkova, Nina F ^a,b   Vinokurova, Natalya G ^a   Morgunov, Igor G ^a   Ermakova, Inna T ^a,b   Leontievsky, Alexey A ^a,b  

^a SKRYABIN INSTITUTE OF BIOCHEMISTRY AND PHYSIOLOGY OF MICROORGANISMS   (Russian Federation)

^b PUSHCHINO STATE UNIVERSITY   (Russian Federation)

Author keywords

C P lyase; Glyphosate; Glyphosate Oxidoreductase; Methylphosphonic acid; Phosphonatase; Phosphonates

Indexed keywords

C-P LYASE; GLYPHOSATE OXIDOREDUCTASE; GLYPHOSATES; METHYLPHOSPHONIC ACID; PHOSPHONATASE; PHOSPHONATES;

DEGRADATION; METABOLISM; PHOSPHORUS; SOIL POLLUTION; SOILS;

HERBICIDES;

ADENOSINE PHOSPHATE; FORMALDEHYDE; GLYCINE; GLYOXYLIC ACID; GLYPHOSATE; GLYPHOSATE OXIDOREDUCTASE; METHANE; METHYLPHOSPHONIC ACID; OXIDOREDUCTASE; PHOSPHONIC ACID DERIVATIVE; SARCOSINE; UNCLASSIFIED DRUG;

BACTERIUM; BIOTRANSFORMATION; CATABOLISM; ENZYME ACTIVITY; GLYPHOSATE; GROWTH RATE; PHOSPHORUS; SOIL MICROORGANISM; SOIL POLLUTION;

ACHROMOBACTER; ARTICLE; BACTERIAL CELL; BACTERIAL GROWTH; BACTERIUM ISOLATION; CATABOLISM; ENZYME ACTIVITY; NONHUMAN; OCHROBACTRUM ANTHROPI; SOIL; SOIL POLLUTION;

ACHROMOBACTER; BIOTRANSFORMATION; DNA, BACTERIAL; DNA, RIBOSOMAL; GLYCINE; METABOLIC NETWORKS AND PATHWAYS; OCHROBACTRUM ANTHROPI; ORGANOPHOSPHORUS COMPOUNDS; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SOIL MICROBIOLOGY;

ACHROMOBACTER; ACHROMOBACTER SP.; BACTERIA (MICROORGANISMS); OCHROBACTRUM ANTHROPI;

EID: 84856286561     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-011-3485-y     Document Type: Article

References (36)

1. Adams MA, Luo Y, Hove-Jensen B, He SM, van Staalduinen LM, Zechel DL, Jia Z (2008) Crystal structure of PhnH: as essential component of carbon-phosphorus lyase in Escherichia coli. J Bacteriol 190:1072-1083 (Pubitemid 351170951)
2. Balthazor TM, Hallas LE (1986) Glyphosate-degrading microorganisms from industrial activated sludge. Appl Environ Microbiol 51:432-434 (Pubitemid 16159854)
3. Dick RE, Quinn JP (1995) Glyphosate-degrading isolates from environmental samples: occurrence and pathways of degradation. Appl Microbiol Biotechnol 43:545-550
4. Ermakova IT, Shushkova TV, Leontievsky AA (2008) Microbial degradation of organophosphonates by soil bacteria. Microbiology (Moscow) 77:615-620
5. Ermakova IT, Kiseleva NI, Shushkova TV, Zharikov M, Zharikov GA, Leontievsky AA (2010) Bioremediation of glyphosate-contaminated soils. Appl Microbiol Biotechnol 88:585-594
6. Gard JK, Feng PCC, Hutton WC (1997) Nuclear magnetic resonance timecourse studies of glyphosate metabolism by microbial soil isolates. Xenobiotica 27:633-644 (Pubitemid 27301400)
7. Hess HH, Derr JE (1975) Assay of inorganic and organic phosphorus in the 0.1-5 nanomole range. Anal Biochem 63:607-613
8. Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL (2003) Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways. J Bacteriol 185:2793-2801 (Pubitemid 36514590)
9. Hove-Jensen B, Rosenkrantz TJ, Zechel DL, Willemoës M (2010) Accumulation of intermediates of the carbon-phosphorus lyase pathway for phosphonate degradation in phn mutants of Escherichia coli. J Bacteriol 192:370-374
10. Isbell AF, Englert LF, Rosenberg H (1969) Phosphonoacetaldehyde. J Org Chem 34:755-756
11. Jacob GS, Garbow JR, Hallas LE, Kimack NM, Kishore GM, Schaefer J (1988) Metabolism of glyphosate in Pseudomonas sp. strain LBr. Appl Environ Microbiol 54:2953-2958 (Pubitemid 19002386)
12. Jiang WH, Metcalf WW, Lee KS, Wanner BL (1995) Molecular cloning, mapping, and regulation of Pho-regulon genes for phosphonate breakdown by the phosphonatase pathway of Salmonella typhimurium LT2. J Bacteriol 177:6411-6421
13. Kertesz M, Elgorriaga A, Amrhein N (1991) Evidence for two distinct phosphonate-degrading enzymes (C-P lyases) in Arthrobacter sp. GLP-1. Biodegradation 2:53-59
14. Kim AD, Baker AS, Dunaway-Mariano D, Metcalf WW, Wanner BL, Martin BM (2002) The 2-aminoethylphosphonate-specific transaminase of the 2-aminoethylphosphonate degradation pathway. J Bacteriol 184:4134-4140 (Pubitemid 34774293)
15. Kishore GM, Barry GF (1992) Glyphosate tolerant plants. International patent WO92/00377
16. Kishore GM, Jacob GS (1987) Degradation of glyphosate by Pseudomonas sp. PG2982 via a sarcosine intermediate. J Biol Chem 262:12164-12168
17. Kononova SV, Nesmeyanova MA (2002) Phosphonates and their degradation by microorganisms. Biochemistry (Moscow) 67:184-195 (Pubitemid 34474091)
18. Lee KS, Metcalf WW, Wanner BL (1992) Evidence for two phosphonate degradative pathways in Enterobacter aerogenes. J Bacteriol 174:2501-2510
19. Liu CM, McLean PA, Sookdeo CC, Cannon FC (1991) Degradation of the herbicide glyphosate by members of the family Rhizobiaceae. Appl Environ Microbiol 57:1799-1804
20. McAuliffe KS, Hallas LE, Kulpa CF (1990) Glyphosate degradation by Agrobacterium radiobacter isolated from activated sludge. J Ind Microbiol 6:219-221 (Pubitemid 20386394)
21. McGrath JW, Wisdom GB, McMullan G, Larkin MJ, Quinn JP (1995) The purification and properties of phosphonoacetate hydrolase, a novel carbon-phosphorus bond cleavage enzyme from Pseudomonas flourescens 23 F. Eur J Biochem 234:225-230
22. Morais MC, Zhang GF, Zhang WH, Olsen DB, Dunaway-Mariano D, Allen KN (2004) X-ray crystallographic and site-directed mutagenesis analysis of the mechanism of Shiff-base formation in phosphonoacetaldehyde hydrolase catalysis. J Biol Chem 279:9353-9361 (Pubitemid 38296000)
23. Obojska A, Lejczak B, Kubrak M (1999) Degradation of phosphonates by Streptomyces isolates. Appl Microbiol Biotechnol 51:872-876 (Pubitemid 29304763)
24. Pipke R, Amrhein N (1988) Isolation and characterization of a mutant of Arthrobacter sp. strain GLP-1 which utilizes the herbicide glyphosate as its sole source of phosphorus and nitrogen. Appl Environ Microbiol 54:2868-2870
25. Pipke R, Amrhein N, Jacob GS, Schaefer J, Kishore GM (1987) Metabolism of glyphosate in an Arthrobacter sp. GLP-1. Eur J Biochem 165:267-273 (Pubitemid 17092963)
26. Podzelinska K, He SM, Wathier M, Yakunin A, Proudfoot M, Hove-Jensen B, Zechel DL, Jia Z (2009) Structure of PhnP, a phosphodiesterase of the carbon-phosphorus lyase pathway for phosphonate degradation. J Biol Chem 284:17216-17226
27. Quinn JP, Kulakova AN, Cooley NA, McGrath JW (2007) New ways to break an old bond: the bacterial carbon-phosphorus hydrolases and their role in biogeochemical phosphorus cycling. Environ Microbiol 9:2392-2400 (Pubitemid 47366673)
28. Schowanek D, Verstraete W (1990) Phosphonate utilization by bacterial cultures and enrichments from environmental samples. Appl Environ Microbiol 56:895-903 (Pubitemid 20114439)
29. Shames SL, Wackett LP, LaBarge MS, Kuczkowski RL, Walsh CT (1987) Fragmentative and stereochemical isomerization probes for hemolytic carbon to phosphorus bond scission catalyzed by bacterial carbon-phosphorus lyase. Bioorg Chem 15:366-373
30. Talbot HW, Johnson LM, Munnecke DM (1984) Glyphosate utilization by Pseudomonas sp. and Alcaligenes sp. isolated from environmental sources. Curr Microbiol 10:255-260
31. Ternan NG, Quinn JP (1998) Phosphate starvation-independent 2-aminoethylphosphonic acid biodegradation in a newly isolated strain of Pseudomonas putida, NG2. Syst Appl Microbiol 21:346-352 (Pubitemid 28456838)
32. Ternan NG, McGrath JW, McMullan G, Quinn JP (1998) Review: Organophosphonates: occurrence, synthesis and biodegradation by microorganisms. World J Microbiol Biotechnol 14:635-647 (Pubitemid 28540010)
33. Ternan NG, Hamilton JT, Quinn JP (2000) Initial in vitro characterization of phosphonopyruvate hydrolase, a novel phosphate starvation-independent carbon-phosphorus bond cleavage enzyme in Burkholderia cepacea Pal6. Arch Microbiol 173:35-41 (Pubitemid 30060678)
34. White AK, Metcalf WW (2004) Two C-P lyase operons in Pseudomonas stutzeri and their roles in the oxidation of phosphonates, phosphite, and hypophosphite. J Bacteriol 186:4730-4739 (Pubitemid 38891035)
35. White AK, Metcalf WW (2007) Microbial metabolism of reduced phosphorus compounds. Annu Rev Microbiol 61:379-400 (Pubitemid 350058214)
36. Zboinska E, Maliszewska I, Leijczak B, Kafarski P (1992) Degradation of organophosphonates by Penicillium citrinum. Lett Appl Microbiol 15:356-358