-
1
-
-
34547568767
-
Auxin is surfacing
-
Abel S (2007) Auxin is surfacing. ACS Chem Biol 2: 380-384.
-
(2007)
ACS Chem Biol
, vol.2
, pp. 380-384
-
-
Abel, S.1
-
2
-
-
34447117743
-
The plant stress hormone ethylene controls floral transition via DELLA-dependent regulation of floral meristem-identity genes
-
Achard P, Baghour M, Chapple A, Hedden P, van Der Straeten D, Genschik P, Moritz T, Harberd NP (2007) The plant stress hormone ethylene controls floral transition via DELLA-dependent regulation of floral meristem-identity genes. Proc Natl Acad Sci USA 104: 6484-6489.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 6484-6489
-
-
Achard, P.1
Baghour, M.2
Chapple, A.3
Hedden, P.4
van der Straeten, D.5
Genschik, P.6
Moritz, T.7
Harberd, N.P.8
-
3
-
-
0346848758
-
RNA interference: biology, mechanism, and applications
-
Agrawal N, Dasaradhi PV, Mohmmed A, Malhotra P, Bhatnagar RK, Mukherjee SK (2003) RNA interference: biology, mechanism, and applications. Microbiol Mol Biol Rev 67: 657-685.
-
(2003)
Microbiol Mol Biol Rev
, vol.67
, pp. 657-685
-
-
Agrawal, N.1
Dasaradhi, P.V.2
Mohmmed, A.3
Malhotra, P.4
Bhatnagar, R.K.5
Mukherjee, S.K.6
-
4
-
-
17444430392
-
MicroRNA-directed phasing during trans-acting siRNA biogenesis in plants
-
Allen E, Xie Z, Gustafson AM, Carrington JC (2005) MicroRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell 121: 207-221.
-
(2005)
Cell
, vol.121
, pp. 207-221
-
-
Allen, E.1
Xie, Z.2
Gustafson, A.M.3
Carrington, J.C.4
-
5
-
-
0037782493
-
MicroRNAs: at the root of plant development?
-
Bartel B, Bartel DP (2003) MicroRNAs: at the root of plant development? Plant Physiol 132: 709-717.
-
(2003)
Plant Physiol
, vol.132
, pp. 709-717
-
-
Bartel, B.1
Bartel, D.P.2
-
6
-
-
0037738567
-
HASTY, the Arabidopsis ortholog of exportin 5/MSN5, regulates phase change and morphogenesis
-
Bollman KM, Aukerman MJ, Park MY, Hunter C, Berardini TZ, Poethig RS (2003) HASTY, the Arabidopsis ortholog of exportin 5/MSN5, regulates phase change and morphogenesis. Development 130: 1493-1504.
-
(2003)
Development
, vol.130
, pp. 1493-1504
-
-
Bollman, K.M.1
Aukerman, M.J.2
Park, M.Y.3
Hunter, C.4
Berardini, T.Z.5
Poethig, R.S.6
-
7
-
-
78650281342
-
New methods for next generation sequencing based microRNA expression profiling
-
Buermans HP, Ariyurek Y, van Ommen G, den Dunnen JT, t Hoen PA (2010) New methods for next generation sequencing based microRNA expression profiling. BMC Genomics 11: 716.
-
(2010)
BMC Genomics
, vol.11
, pp. 716
-
-
Buermans, H.P.1
Ariyurek, Y.2
van Ommen, G.3
den Dunnen, J.T.4
t Hoen, P.A.5
-
8
-
-
0038299558
-
Role of microRNAs in plant and animal development
-
Carrington JC, Ambros V (2003) Role of microRNAs in plant and animal development. Science 301: 336-338.
-
(2003)
Science
, vol.301
, pp. 336-338
-
-
Carrington, J.C.1
Ambros, V.2
-
9
-
-
70350433270
-
Auxin as compère in plant hormone crosstalk
-
Chandler JW (2009) Auxin as compère in plant hormone crosstalk. Planta 231: 1-12.
-
(2009)
Planta
, vol.231
, pp. 1-12
-
-
Chandler, J.W.1
-
10
-
-
26944437949
-
MicroRNA biogenesis and function in plants
-
Chen X (2005) MicroRNA biogenesis and function in plants. FEBS Lett 579: 5923-5931.
-
(2005)
FEBS Lett
, vol.579
, pp. 5923-5931
-
-
Chen, X.1
-
11
-
-
38049148183
-
Pseudomonas syringae type III effector AvrRpt2 alters Arabidopsis thaliana auxin physiology
-
Chen Z, Agnew JL, Cohen JD, He P, Shan L, Sheen J, Kunkel BN (2007) Pseudomonas syringae type III effector AvrRpt2 alters Arabidopsis thaliana auxin physiology. Proc Natl Acad Sci USA 104: 20131-20136.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 20131-20136
-
-
Chen, Z.1
Agnew, J.L.2
Cohen, J.D.3
He, P.4
Shan, L.5
Sheen, J.6
Kunkel, B.N.7
-
12
-
-
19544379019
-
The F-box protein TIR1 is an auxin receptor
-
Dharmasiri N, Dharmasiri S, Estelle M (2005) The F-box protein TIR1 is an auxin receptor. Nature 435: 441-445.
-
(2005)
Nature
, vol.435
, pp. 441-445
-
-
Dharmasiri, N.1
Dharmasiri, S.2
Estelle, M.3
-
13
-
-
33646165249
-
Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis
-
Fahlgren N, Montgomery TA, Howell MD, Allen E, Dvorak SK, Alexander AL, Carrington JC (2006) Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis. Current Biol 16: 939-944.
-
(2006)
Current Biol
, vol.16
, pp. 939-944
-
-
Fahlgren, N.1
Montgomery, T.A.2
Howell, M.D.3
Allen, E.4
Dvorak, S.K.5
Alexander, A.L.6
Carrington, J.C.7
-
14
-
-
34547115664
-
High-Throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of miRNA genes
-
Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dang JL, Carrington JC (2007) High-Throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of miRNA genes. PLoS One 2: e219.
-
(2007)
PLoS One
, vol.2
-
-
Fahlgren, N.1
Howell, M.D.2
Kasschau, K.D.3
Chapman, E.J.4
Sullivan, C.M.5
Cumbie, J.S.6
Givan, S.A.7
Law, T.F.8
Grant, S.R.9
Dang, J.L.10
Carrington, J.C.11
-
15
-
-
78049414227
-
Epigenetic reprogramming in plant and animal development
-
Feng S, Jacobsen SE, Reik W (2010) Epigenetic reprogramming in plant and animal development. Science 330: 622-627.
-
(2010)
Science
, vol.330
, pp. 622-627
-
-
Feng, S.1
Jacobsen, S.E.2
Reik, W.3
-
16
-
-
33746354306
-
Plant signalling: the inexorable rise of auxin
-
Fleming AJ (2006) Plant signalling: the inexorable rise of auxin. Trends Cell Biol 16: 397-402.
-
(2006)
Trends Cell Biol
, vol.16
, pp. 397-402
-
-
Fleming, A.J.1
-
17
-
-
65649142963
-
Hormone (dis)harmony moulds plant health and disease
-
Grant MR, Jones JD (2009) Hormone (dis)harmony moulds plant health and disease. Science 324: 750-752.
-
(2009)
Science
, vol.324
, pp. 750-752
-
-
Grant, M.R.1
Jones, J.D.2
-
18
-
-
0035890987
-
Auxin regulates SCFTIR1-dependent degradation of AUX/IAA proteins
-
Gray WM, Kepinski S, Rouse D, Leyser O, Estelle M (2001) Auxin regulates SCFTIR1-dependent degradation of AUX/IAA proteins. Nature 414: 271-276.
-
(2001)
Nature
, vol.414
, pp. 271-276
-
-
Gray, W.M.1
Kepinski, S.2
Rouse, D.3
Leyser, O.4
Estelle, M.5
-
19
-
-
74349103203
-
Auxin herbicides: current status of mechanism and mode of action
-
Grossmann K (2010) Auxin herbicides: current status of mechanism and mode of action. Pest Manag Sci 66: 113-120.
-
(2010)
Pest Manag Sci
, vol.66
, pp. 113-120
-
-
Grossmann, K.1
-
21
-
-
24944510549
-
MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for Arabidopsis lateral root development
-
Guo HS, Xie Q, Fei JF, Chua NH (2005) MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for Arabidopsis lateral root development. Plant Cell 17: 1376-1386.
-
(2005)
Plant Cell
, vol.17
, pp. 1376-1386
-
-
Guo, H.S.1
Xie, Q.2
Fei, J.F.3
Chua, N.H.4
-
22
-
-
72049120376
-
Phenotypic plasticity of adventitious rooting in Arabidopsis is controlled by complex regulation of AUXIN RESPONSE FACTOR transcripts and microRNA abundance
-
Gutierrez L, Bussell JD, Pacurar DI, Schwambach J, Pacurar M, Bellini C (2009) Phenotypic plasticity of adventitious rooting in Arabidopsis is controlled by complex regulation of AUXIN RESPONSE FACTOR transcripts and microRNA abundance. Plant Cell 21: 3119-3132.
-
(2009)
Plant Cell
, vol.21
, pp. 3119-3132
-
-
Gutierrez, L.1
Bussell, J.D.2
Pacurar, D.I.3
Schwambach, J.4
Pacurar, M.5
Bellini, C.6
-
23
-
-
0035999463
-
Auxin-responsive gene expression: genes, promoters and regulatory factors
-
Hagen G, Guilfoyle T (2002) Auxin-responsive gene expression: genes, promoters and regulatory factors. Plant Mol Biol 49: 357-372.
-
(2002)
Plant Mol Biol
, vol.49
, pp. 357-372
-
-
Hagen, G.1
Guilfoyle, T.2
-
24
-
-
0742323351
-
The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in microRNA-mediated gene regulation
-
Han MH, Goud S, Song L, Fedoroff N (2004) The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in microRNA-mediated gene regulation. Proc Natl Acad Sci USA 101: 1093-1098.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 1093-1098
-
-
Han, M.H.1
Goud, S.2
Song, L.3
Fedoroff, N.4
-
25
-
-
84862224848
-
The interaction and integration of auxin signaling components
-
Hayashi K (2012) The interaction and integration of auxin signaling components. Plant Cell Physiol 53: 965-975.
-
(2012)
Plant Cell Physiol
, vol.53
, pp. 965-975
-
-
Hayashi, K.1
-
26
-
-
33845755314
-
Arabidopsis CUP-SHAPED COTYLEDON3 regulates postembryonic shoot meristem and organ boundary formation
-
Hibara K, Karim MR, Takada S, Taoka K, Furutani M, Aida M, Tasaka M (2006) Arabidopsis CUP-SHAPED COTYLEDON3 regulates postembryonic shoot meristem and organ boundary formation. Plant Cell 18: 2946-2957.
-
(2006)
Plant Cell
, vol.18
, pp. 2946-2957
-
-
Hibara, K.1
Karim, M.R.2
Takada, S.3
Taoka, K.4
Furutani, M.5
Aida, M.6
Tasaka, M.7
-
27
-
-
27744565583
-
Crown rootless1, which is essential for crown root formation in rice, is a target of an AUXIN RESPONSE FACTOR in auxin signaling
-
Inukai Y, Sakamoto T, Ueguchi-Tanaka M, Shibata Y, Gomi K, Umemura I, Hasegawa Y, Ashikari M, Kitano H, Matsuoka M (2005) Crown rootless1, which is essential for crown root formation in rice, is a target of an AUXIN RESPONSE FACTOR in auxin signaling. Plant Cell 17: 1387-1396.
-
(2005)
Plant Cell
, vol.17
, pp. 1387-1396
-
-
Inukai, Y.1
Sakamoto, T.2
Ueguchi-Tanaka, M.3
Shibata, Y.4
Gomi, K.5
Umemura, I.6
Hasegawa, Y.7
Ashikari, M.8
Kitano, H.9
Matsuoka, M.10
-
28
-
-
2942672580
-
Computational identification of plant microRNAs and their targets, including a stress-induced miRNA
-
Jones-Rhoades MW, Bartel DP (2004) Computational identification of plant microRNAs and their targets, including a stress-induced miRNA. Mol Cell 14: 787-799.
-
(2004)
Mol Cell
, vol.14
, pp. 787-799
-
-
Jones-Rhoades, M.W.1
Bartel, D.P.2
-
29
-
-
84861755996
-
Identification of mirtrons in rice using MirtronPred: a tool for predicting plant mirtrons
-
Joshi PK, Gupta D, Nandal UK, Khan Y, Mukherjee SK, Sanan-Mishra N (2012) Identification of mirtrons in rice using MirtronPred: a tool for predicting plant mirtrons. Genomics 9: 370-375.
-
(2012)
Genomics
, vol.9
, pp. 370-375
-
-
Joshi, P.K.1
Gupta, D.2
Nandal, U.K.3
Khan, Y.4
Mukherjee, S.K.5
Sanan-Mishra, N.6
-
30
-
-
77956111169
-
Role of small RNAs in host-microbe interactions
-
Katiyar-Agarwal S, Jin H (2010) Role of small RNAs in host-microbe interactions. Annu Rev Phytopathol 48: 225-246.
-
(2010)
Annu Rev Phytopathol
, vol.48
, pp. 225-246
-
-
Katiyar-Agarwal, S.1
Jin, H.2
-
31
-
-
19544386804
-
The Arabidopsis F-box protein TIR1 is an auxin receptor
-
Kepinski S, Leyser O (2005) The Arabidopsis F-box protein TIR1 is an auxin receptor. Nature 435: 446-451.
-
(2005)
Nature
, vol.435
, pp. 446-451
-
-
Kepinski, S.1
Leyser, O.2
-
32
-
-
18344369543
-
MicroRNA biogenesis: coordinated cropping and dicing
-
Kim VN (2005) MicroRNA biogenesis: coordinated cropping and dicing. Nat Rev Mol Cell Biol 6: 376-385.
-
(2005)
Nat Rev Mol Cell Biol
, vol.6
, pp. 376-385
-
-
Kim, V.N.1
-
33
-
-
56749152345
-
CRL4 regulates crown root formation through auxin transport in rice
-
Kitomi Y, Ogawa A, Kitano H, Inukai Y (2008) CRL4 regulates crown root formation through auxin transport in rice. Plant Root 2: 19-28.
-
(2008)
Plant Root
, vol.2
, pp. 19-28
-
-
Kitomi, Y.1
Ogawa, A.2
Kitano, H.3
Inukai, Y.4
-
34
-
-
0027751663
-
The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
-
Lee RC, Feinbaum RL, Ambros V (1993) The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 75: 843-854.
-
(1993)
Cell
, vol.75
, pp. 843-854
-
-
Lee, R.C.1
Feinbaum, R.L.2
Ambros, V.3
-
35
-
-
23944493378
-
Methylation protects miRNAs and siRNAs from a 3′-end uridylation activity in Arabidopsis
-
Li J, Yang Z, Yu B, Liu J, Chen X (2005) Methylation protects miRNAs and siRNAs from a 3′-end uridylation activity in Arabidopsis. Curr Biol 15: 1501-1507.
-
(2005)
Curr Biol
, vol.15
, pp. 1501-1507
-
-
Li, J.1
Yang, Z.2
Yu, B.3
Liu, J.4
Chen, X.5
-
36
-
-
69949184885
-
Adventitious root formation in rice requires OsGNOM1 and is mediated by the OsPINs family
-
Liu S, Wang J, Wang L, Wang X, Xue Y, Wu P, Shou H (2009) Adventitious root formation in rice requires OsGNOM1 and is mediated by the OsPINs family. Cell Res 19: 1110-1119.
-
(2009)
Cell Res
, vol.19
, pp. 1110-1119
-
-
Liu, S.1
Wang, J.2
Wang, L.3
Wang, X.4
Xue, Y.5
Wu, P.6
Shou, H.7
-
37
-
-
0037144457
-
Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA
-
Llave C, Xie Z, Kasschau KD, Carrington JC (2002) Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA. Science 297: 2053-2056.
-
(2002)
Science
, vol.297
, pp. 2053-2056
-
-
Llave, C.1
Xie, Z.2
Kasschau, K.D.3
Carrington, J.C.4
-
38
-
-
27744471144
-
Novel and mechanical stress-responsive microRNAs in Populus trichocarpa that are absent from Arabidopsis
-
Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL (2005) Novel and mechanical stress-responsive microRNAs in Populus trichocarpa that are absent from Arabidopsis. Plant Cell 17: 2186-2203.
-
(2005)
Plant Cell
, vol.17
, pp. 2186-2203
-
-
Lu, S.1
Sun, Y.H.2
Shi, R.3
Clark, C.4
Li, L.5
Chiang, V.L.6
-
39
-
-
33745271035
-
Functions of microRNAs and related small RNAs in plants
-
Mallory AC, Vaucheret H (2006) Functions of microRNAs and related small RNAs in plants. Nat Genet 38: S31-S36.
-
(2006)
Nat Genet
, vol.38
-
-
Mallory, A.C.1
Vaucheret, H.2
-
40
-
-
4444363152
-
MicroRNA control of PHABULOSA in leaf development: importance of pairing to the microRNA 5′ region
-
Mallory AC, Reinhart BJ, Jones-Rhoades MW, Tang G, Zamore PD, Barton MK, Bartel DP (2004a) MicroRNA control of PHABULOSA in leaf development: importance of pairing to the microRNA 5′ region. EMBO J 23: 3356-3364.
-
(2004)
EMBO J
, vol.23
, pp. 3356-3364
-
-
Mallory, A.C.1
Reinhart, B.J.2
Jones-Rhoades, M.W.3
Tang, G.4
Zamore, P.D.5
Barton, M.K.6
Bartel, D.P.7
-
41
-
-
2942697259
-
MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs
-
Mallory AC, Dugas DV, Bartel DP, Bartel B (2004b) MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs. Curr Biol 14: 1035-1046.
-
(2004)
Curr Biol
, vol.14
, pp. 1035-1046
-
-
Mallory, A.C.1
Dugas, D.V.2
Bartel, D.P.3
Bartel, B.4
-
42
-
-
24944493388
-
MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genes
-
Mallory AC, Bartel DP, Bartel B (2005) MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genes. Plant Cell 17: 1360-1375.
-
(2005)
Plant Cell
, vol.17
, pp. 1360-1375
-
-
Mallory, A.C.1
Bartel, D.P.2
Bartel, B.3
-
43
-
-
84869054771
-
Fast-forward genetics identifies plant CPL phosphatases as regulators of miRNA processing factor HYL1
-
Manavella PA, Hagmann J, Ott F, Laubinger S, Franz M, Macek B, Weigel D (2012) Fast-forward genetics identifies plant CPL phosphatases as regulators of miRNA processing factor HYL1. Cell 151: 859-870.
-
(2012)
Cell
, vol.151
, pp. 859-870
-
-
Manavella, P.A.1
Hagmann, J.2
Ott, F.3
Laubinger, S.4
Franz, M.5
Macek, B.6
Weigel, D.7
-
44
-
-
77953193344
-
miR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth
-
Marin E, Jouannet V, Herz A, Lokerse AS, Weijers D, Vaucheret H, Nussaume L, Crespi MD, Maizel A (2010) miR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth. Plant Cell 22: 1104-1117.
-
(2010)
Plant Cell
, vol.22
, pp. 1104-1117
-
-
Marin, E.1
Jouannet, V.2
Herz, A.3
Lokerse, A.S.4
Weijers, D.5
Vaucheret, H.6
Nussaume, L.7
Crespi, M.D.8
Maizel, A.9
-
45
-
-
73449113271
-
Identification of microRNA processing determinants by random mutagenesis of Arabidopsis MIR172a precursor
-
Mateos JL, Bologna NG, Chorostecki U, Palatnik JF (2010) Identification of microRNA processing determinants by random mutagenesis of Arabidopsis MIR172a precursor. Curr Biol 20: 49-54.
-
(2010)
Curr Biol
, vol.20
, pp. 49-54
-
-
Mateos, J.L.1
Bologna, N.G.2
Chorostecki, U.3
Palatnik, J.F.4
-
46
-
-
78649775548
-
RNA editing of nuclear transcripts in Arabidopsis thaliana
-
Meng Y, Chen D, Jin Y, Mao C, Wu P, Chen M (2010) RNA editing of nuclear transcripts in Arabidopsis thaliana. BMC Genomics 4: S12.
-
(2010)
BMC Genomics
, vol.4
-
-
Meng, Y.1
Chen, D.2
Jin, Y.3
Mao, C.4
Wu, P.5
Chen, M.6
-
48
-
-
41149158475
-
Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation
-
Montgomery TA, Howell MD, Cuperus JT, Li D, Hansen JE, Alexander AL, Chapman EJ, Fahlgren N, Allen E, Carrington JC (2008) Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation. Cell 133: 128-141.
-
(2008)
Cell
, vol.133
, pp. 128-141
-
-
Montgomery, T.A.1
Howell, M.D.2
Cuperus, J.T.3
Li, D.4
Hansen, J.E.5
Alexander, A.L.6
Chapman, E.J.7
Fahlgren, N.8
Allen, E.9
Carrington, J.C.10
-
49
-
-
17444420139
-
The ubiquitin-proteasome pathway and plant development
-
Moon J, Parry G, Estelle M (2004) The ubiquitin-proteasome pathway and plant development. Plant Cell 16: 3181-3195.
-
(2004)
Plant Cell
, vol.16
, pp. 3181-3195
-
-
Moon, J.1
Parry, G.2
Estelle, M.3
-
50
-
-
34447107760
-
The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila
-
Okamura K, Hagen JW, Duan H, Tyler DM, Lai EC (2007) The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila. Cell 130: 89-100.
-
(2007)
Cell
, vol.130
, pp. 89-100
-
-
Okamura, K.1
Hagen, J.W.2
Duan, H.3
Tyler, D.M.4
Lai, E.C.5
-
51
-
-
39749169734
-
Tobacco mosaic virus replicase-auxin/indole acetic acid protein interactions: reprogramming the auxin response pathway to enhance virus infection
-
Padmanabhan MS, Kramer SR, Wang X, Culver JN (2008) Tobacco mosaic virus replicase-auxin/indole acetic acid protein interactions: reprogramming the auxin response pathway to enhance virus infection. J Virol 82: 2477-2485.
-
(2008)
J Virol
, vol.82
, pp. 2477-2485
-
-
Padmanabhan, M.S.1
Kramer, S.R.2
Wang, X.3
Culver, J.N.4
-
52
-
-
0037015239
-
CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana
-
Park W, Li J, Song R, Messing J, Chen X (2002) CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana. Curr Biol 12: 1484-1495.
-
(2002)
Curr Biol
, vol.12
, pp. 1484-1495
-
-
Park, W.1
Li, J.2
Song, R.3
Messing, J.4
Chen, X.5
-
53
-
-
14844339653
-
Nuclear processing and export of microRNAs in Arabidopsis
-
Park MY, Wu G, Gonzalez-Sulser A, Vaucheret H, Poethig RS (2005) Nuclear processing and export of microRNAs in Arabidopsis. Proc Natl Acad Sci USA 102: 3691-3696.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 3691-3696
-
-
Park, M.Y.1
Wu, G.2
Gonzalez-Sulser, A.3
Vaucheret, H.4
Poethig, R.S.5
-
54
-
-
4644286235
-
SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis
-
Peragine A, Yoshikawa M, Wu G, Albrecht HL, Poethig RS (2004) SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis. Genes Dev 18: 2368-2379.
-
(2004)
Genes Dev
, vol.18
, pp. 2368-2379
-
-
Peragine, A.1
Yoshikawa, M.2
Wu, G.3
Albrecht, H.L.4
Poethig, R.S.5
-
56
-
-
0034708122
-
The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans
-
Reinhart BJ, Slack FJ, Basson M, Pasquinelli AE, Bettinger JC, Rougvie AE, Horvitz HR, Ruvkun G (2000) The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans. Nature 403: 901-906.
-
(2000)
Nature
, vol.403
, pp. 901-906
-
-
Reinhart, B.J.1
Slack, F.J.2
Basson, M.3
Pasquinelli, A.E.4
Bettinger, J.C.5
Rougvie, A.E.6
Horvitz, H.R.7
Ruvkun, G.8
-
57
-
-
0036645146
-
MicroRNAs in plants
-
Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP (2002) MicroRNAs in plants. Genes Dev 16: 1616-1626.
-
(2002)
Genes Dev
, vol.16
, pp. 1616-1626
-
-
Reinhart, B.J.1
Weinstein, E.G.2
Rhoades, M.W.3
Bartel, B.4
Bartel, D.P.5
-
58
-
-
0037162702
-
Prediction of plant microRNA targets
-
Rhoades MW, Reinhart BJ, Lim LP, Burge CB, Bartel B, Bartel DP (2002) Prediction of plant microRNA targets. Cell 110: 513-520.
-
(2002)
Cell
, vol.110
, pp. 513-520
-
-
Rhoades, M.W.1
Reinhart, B.J.2
Lim, L.P.3
Burge, C.B.4
Bartel, B.5
Bartel, D.P.6
-
59
-
-
34447097693
-
Intronic microRNA precursors that bypass Drosha processing
-
Ruby JG, Calvin HJ, Bartel DP (2007) Intronic microRNA precursors that bypass Drosha processing. Nature 448: 83-86.
-
(2007)
Nature
, vol.448
, pp. 83-86
-
-
Ruby, J.G.1
Calvin, H.J.2
Bartel, D.P.3
-
60
-
-
0031975589
-
The TIR1 protein of Arabidopsis functions in auxin response and is related to human SKP2 and yeast Grr1p
-
Ruegger M, Dewey E, Gray WM, Hobbie L, Turner J, Estelle M (1998) The TIR1 protein of Arabidopsis functions in auxin response and is related to human SKP2 and yeast Grr1p. Genes Dev 12: 198-207.
-
(1998)
Genes Dev
, vol.12
, pp. 198-207
-
-
Ruegger, M.1
Dewey, E.2
Gray, W.M.3
Hobbie, L.4
Turner, J.5
Estelle, M.6
-
62
-
-
72849129956
-
Cloning and Validation of novel miRNA from basmati rice indicates cross-talk between abiotic and biotic stresses
-
Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK (2009) Cloning and Validation of novel miRNA from basmati rice indicates cross-talk between abiotic and biotic stresses. Mol Genet Genome 282: 463-474.
-
(2009)
Mol Genet Genome
, vol.282
, pp. 463-474
-
-
Sanan-Mishra, N.1
Kumar, V.2
Sopory, S.K.3
Mukherjee, S.K.4
-
63
-
-
80053583176
-
miR393 and secondary sirnas regulate expression of the TIR1/AFB2 auxin receptor clade and auxin-related development of arabidopsis leaves
-
Si-Ammour A, Windels D, Arn-Bouldoires E, Kutter C, Ailhas J, Meins F, Vazquez F (2011) miR393 and secondary sirnas regulate expression of the TIR1/AFB2 auxin receptor clade and auxin-related development of arabidopsis leaves. Plant Physiol 157: 683-691.
-
(2011)
Plant Physiol
, vol.157
, pp. 683-691
-
-
Si-Ammour, A.1
Windels, D.2
Arn-Bouldoires, E.3
Kutter, C.4
Ailhas, J.5
Meins, F.6
Vazquez, F.7
-
64
-
-
73449126830
-
RNA secondary structural determinants of miRNA precursor processing in Arabidopsis
-
Song L, Axtell MJ, Fedoroff NV (2010) RNA secondary structural determinants of miRNA precursor processing in Arabidopsis. Curr Biol 20: 37-41.
-
(2010)
Curr Biol
, vol.20
, pp. 37-41
-
-
Song, L.1
Axtell, M.J.2
Fedoroff, N.V.3
-
65
-
-
27944474886
-
Auxin and light control of adventitious rooting in Arabidopsis require ARGONAUTE1
-
Sorin C, Bussell JD, Camus I, Ljung K, Kowalczyk M, Geiss G, McKhann H, Garcion C, Vaucheret H, Sandberg G, Bellini C (2005) Auxin and light control of adventitious rooting in Arabidopsis require ARGONAUTE1. Plant Cell 17: 1343-1359.
-
(2005)
Plant Cell
, vol.17
, pp. 1343-1359
-
-
Sorin, C.1
Bussell, J.D.2
Camus, I.3
Ljung, K.4
Kowalczyk, M.5
Geiss, G.6
McKhann, H.7
Garcion, C.8
Vaucheret, H.9
Sandberg, G.10
Bellini, C.11
-
66
-
-
44649141242
-
Making sense of hormone crosstalk during plant immune responses
-
Spoel SH, Dong X (2008) Making sense of hormone crosstalk during plant immune responses. Cell Host Microbe 3: 348-351.
-
(2008)
Cell Host Microbe
, vol.3
, pp. 348-351
-
-
Spoel, S.H.1
Dong, X.2
-
67
-
-
22044451183
-
Characterization of an Arabidopsis enzyme family that conjugates amino acids to indole-3-acetic acid
-
Staswick PE, Serban B, Rowe M, Tiryaki I, Maldonado MT, Maldonado MC, Suza W (2005) Characterization of an Arabidopsis enzyme family that conjugates amino acids to indole-3-acetic acid. Plant Cell 17: 616-627.
-
(2005)
Plant Cell
, vol.17
, pp. 616-627
-
-
Staswick, P.E.1
Serban, B.2
Rowe, M.3
Tiryaki, I.4
Maldonado, M.T.5
Maldonado, M.C.6
Suza, W.7
-
68
-
-
4043074968
-
Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis
-
Sunkar R, Zhu JK (2004) Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis. Plant Cell 16: 2001-2019.
-
(2004)
Plant Cell
, vol.16
, pp. 2001-2019
-
-
Sunkar, R.1
Zhu, J.K.2
-
70
-
-
40449131628
-
TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesis
-
Szemenyei H, Hannon M, Long JA (2008) TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesis. Science 319: 1384-1386.
-
(2008)
Science
, vol.319
, pp. 1384-1386
-
-
Szemenyei, H.1
Hannon, M.2
Long, J.A.3
-
71
-
-
33750361422
-
Auxin in action: signalling, transport and the control of plant growth and development
-
Teale WD, Paponov IA, Palme K (2006) Auxin in action: signalling, transport and the control of plant growth and development. Nat Rev Mol Cell Biol 7: 847-859.
-
(2006)
Nat Rev Mol Cell Biol
, vol.7
, pp. 847-859
-
-
Teale, W.D.1
Paponov, I.A.2
Palme, K.3
-
72
-
-
7044228135
-
Disruption and overexpression of auxin response factor 8 gene of Arabidopsis affect hypocotyl elongation and root growth habit, indicating its possible involvement in auxin homeostasis in light condition
-
Tian CE, Muto H, Higuchi K, Matamura T, Tatematsu K, Koshiba T, Yamamoto KT (2004) Disruption and overexpression of auxin response factor 8 gene of Arabidopsis affect hypocotyl elongation and root growth habit, indicating its possible involvement in auxin homeostasis in light condition. Plant J 40: 333-343.
-
(2004)
Plant J
, vol.40
, pp. 333-343
-
-
Tian, C.E.1
Muto, H.2
Higuchi, K.3
Matamura, T.4
Tatematsu, K.5
Koshiba, T.6
Yamamoto, K.T.7
-
73
-
-
0037329943
-
The roles of auxin response factor domains in auxin-responsive transcription
-
Tiwari SB, Hagen G, Guilfoyle TJ (2003) The roles of auxin response factor domains in auxin-responsive transcription. Plant Cell 15: 533-543.
-
(2003)
Plant Cell
, vol.15
, pp. 533-543
-
-
Tiwari, S.B.1
Hagen, G.2
Guilfoyle, T.J.3
-
74
-
-
1042290638
-
Aux/IAA proteins contain a potent transcriptional repression domain
-
Tiwari SB, Hagen G, Guilfoyle TJ (2004) Aux/IAA proteins contain a potent transcriptional repression domain. Plant Cell 16: 533-543.
-
(2004)
Plant Cell
, vol.16
, pp. 533-543
-
-
Tiwari, S.B.1
Hagen, G.2
Guilfoyle, T.J.3
-
75
-
-
77957328824
-
A collection of target mimics for comprehensive analysis of microRNA function in Arabidopsis thaliana
-
Todesco M, Rubio-Somoza I, Paz-Ares J, Weigel D (2010) A collection of target mimics for comprehensive analysis of microRNA function in Arabidopsis thaliana. PLoS Genet 6: e1001031.
-
(2010)
PLoS Genet
, vol.6
-
-
Todesco, M.1
Rubio-Somoza, I.2
Paz-Ares, J.3
Weigel, D.4
-
76
-
-
77950298199
-
Recent progress in auxin biology
-
Tromas A, Perrot-Rechenmann C (2010) Recent progress in auxin biology. C R Biol 333: 297-306.
-
(2010)
C R Biol
, vol.333
, pp. 297-306
-
-
Tromas, A.1
Perrot-Rechenmann, C.2
-
77
-
-
0033545881
-
Activation and repression of transcription by auxin-response factors
-
Ulmasov T, Hagen G, Guilfoyle TJ (1999) Activation and repression of transcription by auxin-response factors. Proc Natl Acad Sci USA 96: 5844-5849.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 5844-5849
-
-
Ulmasov, T.1
Hagen, G.2
Guilfoyle, T.J.3
-
78
-
-
4944225347
-
Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs
-
Vazquez F, Vaucheret H, Rajagopalan R, Lepers C, Gasciolli V, Mallory AC, Hilbert JL, Bartel DP, Crete P (2004) Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs. Mol Cell 16: 69-79.
-
(2004)
Mol Cell
, vol.16
, pp. 69-79
-
-
Vazquez, F.1
Vaucheret, H.2
Rajagopalan, R.3
Lepers, C.4
Gasciolli, V.5
Mallory, A.C.6
Hilbert, J.L.7
Bartel, D.P.8
Crete, P.9
-
79
-
-
77953461424
-
The biosynthetic pathways and biological scopes of plant small RNAs
-
Vazquez F, Legrand S, Windels D (2010) The biosynthetic pathways and biological scopes of plant small RNAs. Trends Plant Sci 15: 337-345.
-
(2010)
Trends Plant Sci
, vol.15
, pp. 337-345
-
-
Vazquez, F.1
Legrand, S.2
Windels, D.3
-
80
-
-
0037712997
-
The ubiquitin/26S proteasome pathway, the complex last chapter in the life of many plant proteins
-
Vierstra RD (2003) The ubiquitin/26S proteasome pathway, the complex last chapter in the life of many plant proteins. Trends Plant Sci 8: 135-142.
-
(2003)
Trends Plant Sci
, vol.8
, pp. 135-142
-
-
Vierstra, R.D.1
-
81
-
-
34047249049
-
Molecular and cellular aspects of auxin transport-mediated development
-
Vieten A, Sauer M, Brewer PB, Friml J (2007) Molecular and cellular aspects of auxin transport-mediated development. Trends Plant Sci 4: 160-168.
-
(2007)
Trends Plant Sci
, vol.4
, pp. 160-168
-
-
Vieten, A.1
Sauer, M.2
Brewer, P.B.3
Friml, J.4
-
82
-
-
84859876115
-
A combinatorial TIR1/AFB-Aux/IAA co-receptor system for differential sensing of auxin
-
Villalobos LIAC, Lee S, Oliveira CD, Ivetac A, Brandt W, Armitage L, Sheard LB, Tan X, Parry G, Mao H, Zheng N, Napier R, Kepinski S, Estelle M (2012) A combinatorial TIR1/AFB-Aux/IAA co-receptor system for differential sensing of auxin. Nature Chem Biol 8: 477-485.
-
(2012)
Nature Chem Biol
, vol.8
, pp. 477-485
-
-
Villalobos, L.I.A.C.1
Lee, S.2
Oliveira, C.D.3
Ivetac, A.4
Brandt, W.5
Armitage, L.6
Sheard, L.B.7
Tan, X.8
Parry, G.9
Mao, H.10
Zheng, N.11
Napier, R.12
Kepinski, S.13
Estelle, M.14
-
83
-
-
27744596243
-
Control of root cap formation by microRNA-targeted auxin response factors in Arabidopsis
-
Wang JW, Wang LJ, Mao YB, Cai WJ, Xue HW, Chen XY (2005) Control of root cap formation by microRNA-targeted auxin response factors in Arabidopsis. Plant Cell 17: 2204-2216.
-
(2005)
Plant Cell
, vol.17
, pp. 2204-2216
-
-
Wang, J.W.1
Wang, L.J.2
Mao, Y.B.3
Cai, W.J.4
Xue, H.W.5
Chen, X.Y.6
-
84
-
-
6044242219
-
Funneling auxin action: specificity in signal transduction
-
Weijers D, Jurgens G (2004) Funneling auxin action: specificity in signal transduction. Curr Opin Plant Biol 7: 687-693.
-
(2004)
Curr Opin Plant Biol
, vol.7
, pp. 687-693
-
-
Weijers, D.1
Jurgens, G.2
-
85
-
-
73449136828
-
Structure determinants for accurate processing of miR172a in Arabidopsis thaliana
-
Werner S, Wollmann H, Schneeberger K, Weigel D (2010) Structure determinants for accurate processing of miR172a in Arabidopsis thaliana. Curr Biol 20: 42-48.
-
(2010)
Curr Biol
, vol.20
, pp. 42-48
-
-
Werner, S.1
Wollmann, H.2
Schneeberger, K.3
Weigel, D.4
-
86
-
-
22144433672
-
A database analysis method identifies an endogenous trans-acting short-interfering RNA that targets the Arabidopsis ARF2, ARF3, and ARF4 genes
-
Williams L, Carles C, Osmont K, Fletcher J (2005) A database analysis method identifies an endogenous trans-acting short-interfering RNA that targets the Arabidopsis ARF2, ARF3, and ARF4 genes. Proc Natl Acad Sci 102: 9703-9708.
-
(2005)
Proc Natl Acad Sci
, vol.102
, pp. 9703-9708
-
-
Williams, L.1
Carles, C.2
Osmont, K.3
Fletcher, J.4
-
87
-
-
19544366287
-
Auxin: regulation, action, and interaction
-
Woodward AW, Bartel B (2005) Auxin: regulation, action, and interaction. Ann Bot 95: 707-735.
-
(2005)
Ann Bot
, vol.95
, pp. 707-735
-
-
Woodward, A.W.1
Bartel, B.2
-
88
-
-
0033635955
-
Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development
-
Xie Q, Frugis G, Colgan D, Chua NH (2000) Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development. Genes Dev 14: 3024-3036.
-
(2000)
Genes Dev
, vol.14
, pp. 3024-3036
-
-
Xie, Q.1
Frugis, G.2
Colgan, D.3
Chua, N.H.4
-
89
-
-
0037068470
-
SINAT5 promotes ubiquitin- related degradation of NAC1 to attenuate auxin signals
-
Xie Q, Guo HS, Dallman G, Fang S, Weissman AM, Chua NH (2002) SINAT5 promotes ubiquitin- related degradation of NAC1 to attenuate auxin signals. Nature 419: 167-170.
-
(2002)
Nature
, vol.419
, pp. 167-170
-
-
Xie, Q.1
Guo, H.S.2
Dallman, G.3
Fang, S.4
Weissman, A.M.5
Chua, N.H.6
-
90
-
-
29144528351
-
Carrington JC (2005) Expression of Arabidopsis MIRNA genes
-
Xie Z, Allen E, Fahlgren N, Calamar A, Givan SA (2005) Carrington JC (2005) Expression of Arabidopsis MIRNA genes. Plant Physiol 138: 2145-2154.
-
(2005)
Plant Physiol
, vol.138
, pp. 2145-2154
-
-
Xie, Z.1
Allen, E.2
Fahlgren, N.3
Calamar, A.4
Givan, S.A.5
-
91
-
-
33745213197
-
Characterizations of a hypomorphic argonaute1 mutant reveal novel AGO1 functions in arabidopsis lateral organ development
-
Yang L, Huang W, Wang H, Cai R, Xu Y, Huang H (2006a) Characterizations of a hypomorphic argonaute1 mutant reveal novel AGO1 functions in arabidopsis lateral organ development. Plant Mol Biol 61: 63-78.
-
(2006)
Plant Mol Biol
, vol.61
, pp. 63-78
-
-
Yang, L.1
Huang, W.2
Wang, H.3
Cai, R.4
Xu, Y.5
Huang, H.6
-
92
-
-
33748314483
-
SERRATE is a novel nuclear regulator in primary microRNA processing in Arabidopsis
-
Yang L, Liu Z, Lu F, Dong A, Huang H (2006b) SERRATE is a novel nuclear regulator in primary microRNA processing in Arabidopsis. Plant J 47: 841-850.
-
(2006)
Plant J
, vol.47
, pp. 841-850
-
-
Yang, L.1
Liu, Z.2
Lu, F.3
Dong, A.4
Huang, H.5
-
93
-
-
77950365831
-
Auxin regulation of the microRNA 390-dependent transacting small interfering RNA pathway in Arabidopsis lateral root development
-
Yoon EK, Yang JH, Lim J, Kim SH, Kim SK, Lee WS (2010) Auxin regulation of the microRNA 390-dependent transacting small interfering RNA pathway in Arabidopsis lateral root development. Nucl Acids Res 38: 1382-1391.
-
(2010)
Nucl Acids Res
, vol.38
, pp. 1382-1391
-
-
Yoon, E.K.1
Yang, J.H.2
Lim, J.3
Kim, S.H.4
Kim, S.K.5
Lee, W.S.6
-
94
-
-
13644256193
-
Methylation as a crucial step in plant microRNA biogenesis
-
Yu B, Yang Z, Li J, Minakhina S, Yang M, Padgett RW, Steward R, Chen X (2005) Methylation as a crucial step in plant microRNA biogenesis. Science 307: 932-935.
-
(2005)
Science
, vol.307
, pp. 932-935
-
-
Yu, B.1
Yang, Z.2
Li, J.3
Minakhina, S.4
Yang, M.5
Padgett, R.W.6
Steward, R.7
Chen, X.8
-
95
-
-
27844495281
-
Identification and characterization of new plant microRNAs using EST analysis
-
Zhang BH, Pan XP, Wang QL, Cobb GP, Anderson TA (2005) Identification and characterization of new plant microRNAs using EST analysis. Cell Res 15: 336-360.
-
(2005)
Cell Res
, vol.15
, pp. 336-360
-
-
Zhang, B.H.1
Pan, X.P.2
Wang, Q.L.3
Cobb, G.P.4
Anderson, T.A.5
-
96
-
-
33745156778
-
Identification of 188 conserved maize microRNAs and their targets
-
Zhang B, Pan X, Anderson TA (2006) Identification of 188 conserved maize microRNAs and their targets. FEBS Lett 580: 3753-3762.
-
(2006)
FEBS Lett
, vol.580
, pp. 3753-3762
-
-
Zhang, B.1
Pan, X.2
Anderson, T.A.3
|