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Volumn 153, Issue 4, 2013, Pages 773-784

Sperm, but not oocyte, DNA methylome is inherited by zebrafish early embryos

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 84877696605     PISSN: 00928674     EISSN: 10974172     Source Type: Journal    
DOI: 10.1016/j.cell.2013.04.041     Document Type: Article
Times cited : (379)

References (48)
  • 1
    • 34248160438 scopus 로고    scopus 로고
    • Developmentally regulated piRNA clusters implicate MILI in transposon control
    • A.A. Aravin, R. Sachidanandam, A. Girard, K. Fejes-Toth, and G.J. Hannon Developmentally regulated piRNA clusters implicate MILI in transposon control Science 316 2007 744 747
    • (2007) Science , vol.316 , pp. 744-747
    • Aravin, A.A.1    Sachidanandam, R.2    Girard, A.3    Fejes-Toth, K.4    Hannon, G.J.5
  • 3
    • 77955482238 scopus 로고    scopus 로고
    • Paramutation in maize: RNA mediated trans-generational gene silencing
    • M.A. Arteaga-Vazquez, and V.L. Chandler Paramutation in maize: RNA mediated trans-generational gene silencing Curr. Opin. Genet. Dev. 20 2010 156 163
    • (2010) Curr. Opin. Genet. Dev. , vol.20 , pp. 156-163
    • Arteaga-Vazquez, M.A.1    Chandler, V.L.2
  • 5
    • 33646481643 scopus 로고    scopus 로고
    • Dynamic reprogramming of DNA methylation at an epigenetically sensitive allele in mice
    • M.E. Blewitt, N.K. Vickaryous, A. Paldi, H. Koseki, and E. Whitelaw Dynamic reprogramming of DNA methylation at an epigenetically sensitive allele in mice PLoS Genet. 2 2006 e49
    • (2006) PLoS Genet. , vol.2 , pp. 49
    • Blewitt, M.E.1    Vickaryous, N.K.2    Paldi, A.3    Koseki, H.4    Whitelaw, E.5
  • 7
    • 0032524877 scopus 로고    scopus 로고
    • The Drosophila Fab-7 chromosomal element conveys epigenetic inheritance during mitosis and meiosis
    • G. Cavalli, and R. Paro The Drosophila Fab-7 chromosomal element conveys epigenetic inheritance during mitosis and meiosis Cell 93 1998 505 518
    • (1998) Cell , vol.93 , pp. 505-518
    • Cavalli, G.1    Paro, R.2
  • 8
    • 78650061153 scopus 로고    scopus 로고
    • Transgenerational epigenetic inheritance: More questions than answers
    • L. Daxinger, and E. Whitelaw Transgenerational epigenetic inheritance: more questions than answers Genome Res. 20 2010 1623 1628
    • (2010) Genome Res. , vol.20 , pp. 1623-1628
    • Daxinger, L.1    Whitelaw, E.2
  • 9
    • 84857189974 scopus 로고    scopus 로고
    • Understanding transgenerational epigenetic inheritance via the gametes in mammals
    • L. Daxinger, and E. Whitelaw Understanding transgenerational epigenetic inheritance via the gametes in mammals Nat. Rev. Genet. 13 2012 153 162
    • (2012) Nat. Rev. Genet. , vol.13 , pp. 153-162
    • Daxinger, L.1    Whitelaw, E.2
  • 12
    • 78049414227 scopus 로고    scopus 로고
    • Epigenetic reprogramming in plant and animal development
    • S. Feng, S.E. Jacobsen, and W. Reik Epigenetic reprogramming in plant and animal development Science 330 2010 622 627
    • (2010) Science , vol.330 , pp. 622-627
    • Feng, S.1    Jacobsen, S.E.2    Reik, W.3
  • 15
    • 34249330696 scopus 로고    scopus 로고
    • Epigenetic inheritance in plants
    • I.R. Henderson, and S.E. Jacobsen Epigenetic inheritance in plants Nature 447 2007 418 424
    • (2007) Nature , vol.447 , pp. 418-424
    • Henderson, I.R.1    Jacobsen, S.E.2
  • 17
    • 0348049460 scopus 로고    scopus 로고
    • Protocol for nuclear transfer in zebrafish
    • H. Huang, B. Ju, K.Y. Lee, and S. Lin Protocol for nuclear transfer in zebrafish Cloning Stem Cells 5 2003 333 337
    • (2003) Cloning Stem Cells , vol.5 , pp. 333-337
    • Huang, H.1    Ju, B.2    Lee, K.Y.3    Lin, S.4
  • 18
    • 80054097425 scopus 로고    scopus 로고
    • Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos
    • A. Inoue, and Y. Zhang Replication-dependent loss of 5- hydroxymethylcytosine in mouse preimplantation embryos Science 334 2011 194
    • (2011) Science , vol.334 , pp. 194
    • Inoue, A.1    Zhang, Y.2
  • 19
    • 79952763586 scopus 로고    scopus 로고
    • Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine
    • K. Iqbal, S.G. Jin, G.P. Pfeifer, and P.E. Szabó Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine Proc. Natl. Acad. Sci. USA 108 2011 3642 3647
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 3642-3647
    • Iqbal, K.1    Jin, S.G.2    Pfeifer, G.P.3    Szabó, P.E.4
  • 20
    • 0037372003 scopus 로고    scopus 로고
    • Epigenetic regulation of gene expression: How the genome integrates intrinsic and environmental signals
    • R. Jaenisch, and A. Bird Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals Nat. Genet. 33 Suppl 2003 245 254
    • (2003) Nat. Genet. , vol.33 , Issue.SUPPL. , pp. 245-254
    • Jaenisch, R.1    Bird, A.2
  • 23
    • 70349303699 scopus 로고    scopus 로고
    • Before maternal-zygotic transition. There was morphogenetic function of nuclei
    • V. Korzh Before maternal-zygotic transition. There was morphogenetic function of nuclei Zebrafish 6 2009 295 302
    • (2009) Zebrafish , vol.6 , pp. 295-302
    • Korzh, V.1
  • 24
    • 79957868920 scopus 로고    scopus 로고
    • Bismark: A flexible aligner and methylation caller for Bisulfite-Seq applications
    • F. Krueger, and S.R. Andrews Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications Bioinformatics 27 2011 1571 1572
    • (2011) Bioinformatics , vol.27 , pp. 1571-1572
    • Krueger, F.1    Andrews, S.R.2
  • 25
    • 0026708177 scopus 로고
    • Targeted mutation of the DNA methyltransferase gene results in embryonic lethality
    • E. Li, T.H. Bestor, and R. Jaenisch Targeted mutation of the DNA methyltransferase gene results in embryonic lethality Cell 69 1992 915 926
    • (1992) Cell , vol.69 , pp. 915-926
    • Li, E.1    Bestor, T.H.2    Jaenisch, R.3
  • 27
    • 35648972684 scopus 로고    scopus 로고
    • Immunological detection of changes in genomic DNA methylation during early zebrafish development
    • A.B. MacKay, A.A. Mhanni, R.A. McGowan, and P.H. Krone Immunological detection of changes in genomic DNA methylation during early zebrafish development Genome 50 2007 778 785
    • (2007) Genome , vol.50 , pp. 778-785
    • Mackay, A.B.1    Mhanni, A.A.2    McGowan, R.A.3    Krone, P.H.4
  • 28
    • 0032833751 scopus 로고    scopus 로고
    • Absence of genome-wide changes in DNA methylation during development of the zebrafish
    • D. Macleod, V.H. Clark, and A. Bird Absence of genome-wide changes in DNA methylation during development of the zebrafish Nat. Genet. 23 1999 139 140
    • (1999) Nat. Genet. , vol.23 , pp. 139-140
    • Macleod, D.1    Clark, V.H.2    Bird, A.3
  • 29
    • 4544291383 scopus 로고    scopus 로고
    • Global changes in genomic methylation levels during early development of the zebrafish embryo
    • A.A. Mhanni, and R.A. McGowan Global changes in genomic methylation levels during early development of the zebrafish embryo Dev. Genes Evol. 214 2004 412 417
    • (2004) Dev. Genes Evol. , vol.214 , pp. 412-417
    • Mhanni, A.A.1    McGowan, R.A.2
  • 30
    • 80052937538 scopus 로고    scopus 로고
    • Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates
    • A. Molaro, E. Hodges, F. Fang, Q. Song, W.R. McCombie, G.J. Hannon, and A.D. Smith Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates Cell 146 2011 1029 1041
    • (2011) Cell , vol.146 , pp. 1029-1041
    • Molaro, A.1    Hodges, E.2    Fang, F.3    Song, Q.4    McCombie, W.R.5    Hannon, G.J.6    Smith, A.D.7
  • 32
    • 0025789781 scopus 로고
    • Developmental potential and chromosome constitution of strontium-induced mouse parthenogenones
    • G.T. O'Neill, L.R. Rolfe, and M.H. Kaufman Developmental potential and chromosome constitution of strontium-induced mouse parthenogenones Mol. Reprod. Dev. 30 1991 214 219
    • (1991) Mol. Reprod. Dev. , vol.30 , pp. 214-219
    • O'Neill, G.T.1    Rolfe, L.R.2    Kaufman, M.H.3
  • 33
    • 0033615717 scopus 로고    scopus 로고
    • DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development
    • M. Okano, D.W. Bell, D.A. Haber, and E. Li DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development Cell 99 1999 247 257
    • (1999) Cell , vol.99 , pp. 247-257
    • Okano, M.1    Bell, D.W.2    Haber, D.A.3    Li, E.4
  • 34
    • 0031887992 scopus 로고    scopus 로고
    • Zebrafish hox genes: Genomic organization and modified colinear expression patterns in the trunk
    • V.E. Prince, L. Joly, M. Ekker, and R.K. Ho Zebrafish hox genes: genomic organization and modified colinear expression patterns in the trunk Development 125 1998 407 420
    • (1998) Development , vol.125 , pp. 407-420
    • Prince, V.E.1    Joly, L.2    Ekker, M.3    Ho, R.K.4
  • 36
    • 57649196594 scopus 로고    scopus 로고
    • DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45
    • K. Rai, I.J. Huggins, S.R. James, A.R. Karpf, D.A. Jones, and B.R. Cairns DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45 Cell 135 2008 1201 1212
    • (2008) Cell , vol.135 , pp. 1201-1212
    • Rai, K.1    Huggins, I.J.2    James, S.R.3    Karpf, A.R.4    Jones, D.A.5    Cairns, B.R.6
  • 37
    • 84861752670 scopus 로고    scopus 로고
    • Pull-down of 5-hydroxymethylcytosine DNA using JBP1-coated magnetic beads
    • A.B. Robertson, J.A. Dahl, R. Ougland, and A. Klungland Pull-down of 5-hydroxymethylcytosine DNA using JBP1-coated magnetic beads Nat. Protoc. 7 2012 340 350
    • (2012) Nat. Protoc. , vol.7 , pp. 340-350
    • Robertson, A.B.1    Dahl, J.A.2    Ougland, R.3    Klungland, A.4
  • 38
    • 84655164284 scopus 로고    scopus 로고
    • De novo DNA methylation: A germ cell perspective
    • S.A. Smallwood, and G. Kelsey De novo DNA methylation: a germ cell perspective Trends Genet. 28 2012 33 42
    • (2012) Trends Genet. , vol.28 , pp. 33-42
    • Smallwood, S.A.1    Kelsey, G.2
  • 40
    • 0035980220 scopus 로고    scopus 로고
    • Constitutive genomic methylation during embryonic development of Xenopus
    • G.J. Veenstra, and A.P. Wolffe Constitutive genomic methylation during embryonic development of Xenopus Biochim. Biophys. Acta 1521 2001 39 44
    • (2001) Biochim. Biophys. Acta , vol.1521 , pp. 39-44
    • Veenstra, G.J.1    Wolffe, A.P.2
  • 41
    • 80055115753 scopus 로고    scopus 로고
    • Making gynogenetic diploid zebrafish by early pressure
    • C. Walker, G.S. Walsh, and C. Moens Making gynogenetic diploid zebrafish by early pressure J. Vis. Exp. 28 2009 e1396
    • (2009) J. Vis. Exp. , vol.28 , pp. 1396
    • Walker, C.1    Walsh, G.S.2    Moens, C.3
  • 42
    • 77956095231 scopus 로고    scopus 로고
    • Active DNA demethylation: Many roads lead to Rome
    • S.C. Wu, and Y. Zhang Active DNA demethylation: many roads lead to Rome Nat. Rev. Mol. Cell Biol. 11 2010 607 620
    • (2010) Nat. Rev. Mol. Cell Biol. , vol.11 , pp. 607-620
    • Wu, S.C.1    Zhang, Y.2
  • 43
    • 0026594804 scopus 로고
    • Temporal regulation in the early embryo: Is MBT too good to be true?
    • G.K. Yasuda, and G. Schubiger Temporal regulation in the early embryo: is MBT too good to be true? Trends Genet. 8 1992 124 127
    • (1992) Trends Genet. , vol.8 , pp. 124-127
    • Yasuda, G.K.1    Schubiger, G.2
  • 45
    • 77952355762 scopus 로고    scopus 로고
    • Genome-wide evolutionary analysis of eukaryotic DNA methylation
    • A. Zemach, I.E. McDaniel, P. Silva, and D. Zilberman Genome-wide evolutionary analysis of eukaryotic DNA methylation Science 328 2010 916 919
    • (2010) Science , vol.328 , pp. 916-919
    • Zemach, A.1    McDaniel, I.E.2    Silva, P.3    Zilberman, D.4
  • 47
    • 0025066941 scopus 로고
    • More powerful procedures for multiple significance testing
    • Y. Hochberg, and Y. Benjamini More powerful procedures for multiple significance testing Stat. Med. 9 1990 811 818
    • (1990) Stat. Med. , vol.9 , pp. 811-818
    • Hochberg, Y.1    Benjamini, Y.2
  • 48
    • 77953176036 scopus 로고    scopus 로고
    • A scaling normalization method for differential expression analysis of RNA-seq data
    • M.D. Robinson, and A. Oshlack A scaling normalization method for differential expression analysis of RNA-seq data Genome Biol. 11 2010 R25
    • (2010) Genome Biol. , vol.11 , pp. 25
    • Robinson, M.D.1    Oshlack, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.