메뉴 건너뛰기




Volumn 18, Issue 2, 2013, Pages 231-248

Development of a new wheat microarray from a durum wheat totipotent cDNA library used for a powdery mildew resistance study

Author keywords

5 Azacytidine; Candidate gene; DNA methylation; Durum wheat; Expressed sequence tag; Microarray; Near isogenic line; Physical mapping; Pm36 gene; Powdery mildew; Quantitative real time PCR

Indexed keywords

AZACITIDINE; PLANT RNA;

EID: 84877633189     PISSN: 14258153     EISSN: 16891392     Source Type: Journal    
DOI: 10.2478/s11658-013-0086-z     Document Type: Article
Times cited : (2)

References (48)
  • 1
    • 45349090800 scopus 로고    scopus 로고
    • Reflections and opportunities: gene discovery in the complex wheat genome
    • Snape, J. and Moore, G. Reflections and opportunities: gene discovery in the complex wheat genome. Dev. Plant Breed. 12 (2007) 677-684.
    • (2007) Dev. Plant Breed. , vol.12 , pp. 677-684
    • Snape, J.1    Moore, G.2
  • 2
    • 33847387196 scopus 로고    scopus 로고
    • A collection of expressed sequence tags (ESTs) from "totipotent" cDNA of durum wheat
    • Cifarelli, R., D'Onofrio, O., Lauria, G., Gallitelli, M. and Cellini, F. A collection of expressed sequence tags (ESTs) from "totipotent" cDNA of durum wheat. Minerva Biotech. 18 (2006) 159-164.
    • (2006) Minerva Biotech. , vol.18 , pp. 159-164
    • Cifarelli, R.1    D'Onofrio, O.2    Lauria, G.3    Gallitelli, M.4    Cellini, F.5
  • 3
    • 0013773866 scopus 로고
    • 5-Azacytidine, a new, highly effective cancerostatic
    • Sorm, F., Pískala, A., Cihák, A. and Veselý, J. 5-Azacytidine, a new, highly effective cancerostatic. Experientia20 (1964) 202-203.
    • (1964) Experientia , vol.20 , pp. 202-203
    • Sorm, F.1    Pískala, A.2    Cihák, A.3    Veselý, J.4
  • 4
    • 0014343640 scopus 로고
    • 5-Azacytidine as a mutagen for arboviruses
    • Halle, S. 5-Azacytidine as a mutagen for arboviruses. J. Virol. 2 (1968) 1228-1229.
    • (1968) J. Virol. , vol.2 , pp. 1228-1229
    • Halle, S.1
  • 5
    • 0015496209 scopus 로고
    • Chromatid breakage: differential effect of inhibitors of DNA synthesis during G2 phase
    • Karon, M. and Benedict, W. F. Chromatid breakage: differential effect of inhibitors of DNA synthesis during G2 phase. Science178 (1972) 56-62.
    • (1972) Science , vol.178 , pp. 56-62
    • Karon, M.1    Benedict, W.F.2
  • 6
    • 0017079865 scopus 로고
    • Segmentation of human chromosomes induced by 5-ACR (5-azacytidine)
    • Viegas-Péquignot, E. and Dutrillaux, B. Segmentation of human chromosomes induced by 5-ACR (5-azacytidine). Hum. Genet. 34 (1976) 247-254.
    • (1976) Hum. Genet. , vol.34 , pp. 247-254
    • Viegas-Péquignot, E.1    Dutrillaux, B.2
  • 7
    • 0020027501 scopus 로고
    • Mutagenicity of 5-azacytidine and related nucleosides in C3H/10T 1/2 clone 8 and V79 cells
    • Landolph, J. R. and Jones, P. A. Mutagenicity of 5-azacytidine and related nucleosides in C3H/10T 1/2 clone 8 and V79 cells. Cancer Res. 42 (1982) 817-823.
    • (1982) Cancer Res. , vol.42 , pp. 817-823
    • Landolph, J.R.1    Jones, P.A.2
  • 8
    • 0020262834 scopus 로고
    • Mutagenesis and transformation of C3H/10T1/2 mouse embryo fibroblasts with ultraviolet light and 5-azacytidine
    • Paul, P. Mutagenesis and transformation of C3H/10T1/2 mouse embryo fibroblasts with ultraviolet light and 5-azacytidine. Kobe J. Med. Sci. 28 (1982) 181-196.
    • (1982) Kobe J. Med. Sci. , vol.28 , pp. 181-196
    • Paul, P.1
  • 9
    • 0018102308 scopus 로고
    • 5-Azacytidine: mechanism of action and biological effects in mammalian cells
    • Vesely, J. and Cihak, A. 5-Azacytidine: mechanism of action and biological effects in mammalian cells. Pharmacol. Ther. 2 (1978) 813-840.
    • (1978) Pharmacol. Ther. , vol.2 , pp. 813-840
    • Vesely, J.1    Cihak, A.2
  • 10
    • 0018855455 scopus 로고
    • Mechanism of 5-azacytidine-induced transfer RNA cytosine-5-methyltransferase deficiency
    • Lu, L. J. and Randerath, K. Mechanism of 5-azacytidine-induced transfer RNA cytosine-5-methyltransferase deficiency. Cancer Res. 40 (1980) 2701-2705.
    • (1980) Cancer Res. , vol.40 , pp. 2701-2705
    • Lu, L.J.1    Randerath, K.2
  • 11
    • 0017071884 scopus 로고
    • Inhibition of protein synthesis in 5-azacytidinetreated HeLa cells
    • Lee, T. T. and Karon, M. R. Inhibition of protein synthesis in 5-azacytidinetreated HeLa cells. Biochem. Pharmacol. 25 (1976) 1737-1742.
    • (1976) Biochem. Pharmacol. , vol.25 , pp. 1737-1742
    • Lee, T.T.1    Karon, M.R.2
  • 12
    • 85010224444 scopus 로고    scopus 로고
    • http://v3. espacenet. com/publicationDetails/biblioCC=WO& NR=2005003344& KC=& FT=).
  • 14
    • 44449164850 scopus 로고    scopus 로고
    • Molecular mapping of the novel powdery mildew resistance gene Pm36 introgressed from Triticum turgidum var. dicoccoides in durum wheat
    • Blanco, A., Gadaleta, A., Cenci, A., Carluccio, A. V., Abdelbacki, A. M. M. and Simeone, R. Molecular mapping of the novel powdery mildew resistance gene Pm36 introgressed from Triticum turgidum var. dicoccoides in durum wheat. Theor. Appl. Genet. 117 (2008) 135-142.
    • (2008) Theor. Appl. Genet. , vol.117 , pp. 135-142
    • Blanco, A.1    Gadaleta, A.2    Cenci, A.3    Carluccio, A.V.4    Abdelbacki, A.M.M.5    Simeone, R.6
  • 16
    • 64549093259 scopus 로고    scopus 로고
    • Identification and validation of reference genes for quantitative RT-PCR normalization in wheat
    • Paolacci, A. R., Tanzarella, O. A., Porceddu, E. and Ciaffi, M. Identification and validation of reference genes for quantitative RT-PCR normalization in wheat. BMC Mol. Biol. 10: 11 (2009) doi: 10. 1186/1471-2199-10-11.
    • (2009) BMC Mol. Biol. , vol.10 , pp. 11
    • Paolacci, A.R.1    Tanzarella, O.A.2    Porceddu, E.3    Ciaffi, M.4
  • 18
    • 0001833478 scopus 로고
    • Nullisomic-tetrasomic combinations in hexaploid wheat
    • R. Riley and K. R. Lewis (Eds.), Edinburgh: Oliver and Boyd
    • Sears, E. R. Nullisomic-tetrasomic combinations in hexaploid wheat. In: Chrom. Manip. and Plant Gen. (Riley, R. Lewis, K. R., Eds), Oliver and Boyd, Edinburgh, 1966, 29-45.
    • (1966) Chrom. Manip. And Plant Gen. , pp. 29-45
    • Sears, E.R.1
  • 20
    • 0000845652 scopus 로고
    • The Langdon durum disomic-substitutions and aneuploid analysis in tetraploid wheat
    • Joppa, L. R. and Williams, N. D. The Langdon durum disomic-substitutions and aneuploid analysis in tetraploid wheat. Genome30 (1988) 222-228.
    • (1988) Genome , vol.30 , pp. 222-228
    • Joppa, L.R.1    Williams, N.D.2
  • 21
    • 0029837287 scopus 로고    scopus 로고
    • The deletion stocks of common wheat
    • Endo, T. R. and Gill, B. S. The deletion stocks of common wheat. J. Hered. 87 (1996) 295-307.
    • (1996) J. Hered. , vol.87 , pp. 295-307
    • Endo, T.R.1    Gill, B.S.2
  • 22
    • 0042099904 scopus 로고    scopus 로고
    • Molecular characterization of a set of wheat deletion stocks for use in chromosome bin mapping of ESTs
    • Qi, L. L., Echalier, B., Friebe, B. and Gill, B. Molecular characterization of a set of wheat deletion stocks for use in chromosome bin mapping of ESTs. Funct. Integr. Genomics3 (2003) 39-55.
    • (2003) Funct. Integr. Genomics , vol.3 , pp. 39-55
    • Qi, L.L.1    Echalier, B.2    Friebe, B.3    Gill, B.4
  • 23
    • 0028806048 scopus 로고
    • Quantitative monitoring of gene expression patterns with a complementary DNA microarray
    • Schena, M., Shalon, D., Davis, R. W. and Brown, P. O. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science270 (1995) 467-470.
    • (1995) Science , vol.270 , pp. 467-470
    • Schena, M.1    Shalon, D.2    Davis, R.W.3    Brown, P.O.4
  • 24
    • 26544469942 scopus 로고    scopus 로고
    • Affected sib pair analysis of families with absolute pitch (AP): Exclusion of the Williams locus
    • Gregersen, P. K., Kowalsky, E., de Andrade, M. and Jawaheer, D. Affected sib pair analysis of families with absolute pitch (AP): Exclusion of the Williams locus. Am. J. Hum. Genet. 61 (1997) 2337-2349.
    • (1997) Am. J. Hum. Genet. , vol.61 , pp. 2337-2349
    • Gregersen, P.K.1    Kowalsky, E.2    de Andrade, M.3    Jawaheer, D.4
  • 25
    • 0001117591 scopus 로고
    • Genetics and physiology of primary infection by Erysiphe graminis f.sp. hordei
    • Ellingboe, A. H. Genetics and physiology of primary infection by Erysiphe graminis f. sp. hordei. Phytopathology62 (1972) 401-406.
    • (1972) Phytopathology , vol.62 , pp. 401-406
    • Ellingboe, A.H.1
  • 26
    • 0002641477 scopus 로고
    • Primary germ tubes of Erysiphe graminis conidia
    • Y. Asada, W. R. Bushnell, S. Ouchi, and C. P. Vance (Eds.), Tokyo: Japan Scientific Society Press
    • Kunoh, H. Primary germ tubes of Erysiphe graminis conidia. In: Plant Infection: The Physiological and Biochemical Basis (Asada, Y., Bushnell, W. R., Ouchi, S., Vance, C. P., Eds), Japan Scientific Society Press, Tokyo, 1982, 45-59.
    • (1982) Plant Infection: The Physiological and Biochemical Basis , pp. 45-59
    • Kunoh, H.1
  • 27
    • 0002112475 scopus 로고
    • Genetic analysis of barley mutants with modifications of powdery mildew resistance gene Ml-a12
    • Jorgensen, J. H. Genetic analysis of barley mutants with modifications of powdery mildew resistance gene Ml-a12. Genome30 (1988) 129-132.
    • (1988) Genome , vol.30 , pp. 129-132
    • Jorgensen, J.H.1
  • 28
    • 0027141736 scopus 로고
    • Host response gene transcript accumulation in relation to visible cytological events during Erysiphe graminis attack in isogenic barley lines differing at the Ml-a locus
    • Clark, T. A., Zeyen, R. J., Smith, A. G., Bushnell, W. R., Szabo, L. J. and Vance, C. P. Host response gene transcript accumulation in relation to visible cytological events during Erysiphe graminis attack in isogenic barley lines differing at the Ml-a locus. Physiol. Mol. Plant Pathol. 43 (1993) 283-298.
    • (1993) Physiol. Mol. Plant Pathol. , vol.43 , pp. 283-298
    • Clark, T.A.1    Zeyen, R.J.2    Smith, A.G.3    Bushnell, W.R.4    Szabo, L.J.5    Vance, C.P.6
  • 30
    • 0036845182 scopus 로고    scopus 로고
    • Comprehensive transcript profiling of Ptoand Prf-mediated host defence responses to infection by Pseudomonas syringae pv. tomato
    • Mysore, K. S., Crasta, O. R., Tuori, R. P., Folkerts, O., Swirsky, P. B. and Martin, G. B. Comprehensive transcript profiling of Ptoand Prf-mediated host defence responses to infection by Pseudomonas syringae pv. tomato. Plant J. 32 (2002) 299-315.
    • (2002) Plant J. , vol.32 , pp. 299-315
    • Mysore, K.S.1    Crasta, O.R.2    Tuori, R.P.3    Folkerts, O.4    Swirsky, P.B.5    Martin, G.B.6
  • 31
    • 0141672948 scopus 로고    scopus 로고
    • Probing plant-pathogen interactions and downstream defense signaling using DNA microarrays
    • Wan, J., Dunning, F. M. and Bent, A. F. Probing plant-pathogen interactions and downstream defense signaling using DNA microarrays. Funct. Integr. Genomics2 (2002) 259-273.
    • (2002) Funct. Integr. Genomics , vol.2 , pp. 259-273
    • Wan, J.1    Dunning, F.M.2    Bent, A.F.3
  • 32
    • 0242417576 scopus 로고    scopus 로고
    • Arabidopsis gene expression changes during cyst nematode parasitism revealed by statistical analyses of microarray expression profiles
    • Puthoff, D. P., Nettleton, D., Rodermel, S. R. and Baum, T. J. Arabidopsis gene expression changes during cyst nematode parasitism revealed by statistical analyses of microarray expression profiles. Plant J. 33 (2003) 911-921.
    • (2003) Plant J. , vol.33 , pp. 911-921
    • Puthoff, D.P.1    Nettleton, D.2    Rodermel, S.R.3    Baum, T.J.4
  • 33
    • 0037324536 scopus 로고    scopus 로고
    • Quantitative nature of Arabidopsis responses during compatible and incompatible interactions with the bacterial pathogen Pseudomonas syringae
    • Tao, Y., Xie, Z., Chen, W., Glazebrook, J., Chang, H. S., Han, B., Zhu, T., Zou, G. and Katagiri, F. Quantitative nature of Arabidopsis responses during compatible and incompatible interactions with the bacterial pathogen Pseudomonas syringae. Plant Cell15 (2003) 317-330.
    • (2003) Plant Cell , vol.15 , pp. 317-330
    • Tao, Y.1    Xie, Z.2    Chen, W.3    Glazebrook, J.4    Chang, H.S.5    Han, B.6    Zhu, T.7    Zou, G.8    Katagiri, F.9
  • 34
    • 0038120846 scopus 로고    scopus 로고
    • Characterization of the early response of Arabidopsis to Alternaria brassicicola infection using expression profiling
    • van Wees, S. C., Chang H. S., Zhu, T. and Glazebrook, J. Characterization of the early response of Arabidopsis to Alternaria brassicicola infection using expression profiling. Plant Physiol. 132 (2003) 606-617.
    • (2003) Plant Physiol. , vol.132 , pp. 606-617
    • van Wees, S.C.1    Chang, H.S.2    Zhu, T.3    Glazebrook, J.4
  • 35
    • 0037261908 scopus 로고    scopus 로고
    • Diverse RNA viruses elicit the expression of common sets of genes in susceptible Arabidopsis thaliana plants
    • Whitham, S. A., Quan, S., Chang, H. S., Cooper, B., Estes, B., Zhu, T., Wang, X. and Hou, Y. M. Diverse RNA viruses elicit the expression of common sets of genes in susceptible Arabidopsis thaliana plants. Plant J. 33 (2003) 271-283.
    • (2003) Plant J. , vol.33 , pp. 271-283
    • Whitham, S.A.1    Quan, S.2    Chang, H.S.3    Cooper, B.4    Estes, B.5    Zhu, T.6    Wang, X.7    Hou, Y.M.8
  • 36
    • 3042537244 scopus 로고    scopus 로고
    • Gene expression signatures from three genetically separable resistance gene signaling pathways for downy mildew resistance
    • Eulgem, T., Weigman, V. J., Chang, H. S., McDowell, J. M., Holub, E. B., Glazebrook, J., Zhu, T. and Dangl, J. Gene expression signatures from three genetically separable resistance gene signaling pathways for downy mildew resistance. Plant Physiol. 135 (2004) 1129-1144.
    • (2004) Plant Physiol. , vol.135 , pp. 1129-1144
    • Eulgem, T.1    Weigman, V.J.2    Chang, H.S.3    McDowell, J.M.4    Holub, E.B.5    Glazebrook, J.6    Zhu, T.7    Dangl, J.8
  • 37
    • 0029561598 scopus 로고
    • The glutathione S-transferase supergene family: regulation of GST and the contribution of the isoenzymes to cancer chemoprotection and drug resistance
    • Hayes, J. D. and Pulford, D. J. The glutathione S-transferase supergene family: regulation of GST and the contribution of the isoenzymes to cancer chemoprotection and drug resistance. Crit. Rev. Bioch. Mol. Biol. 30 (1995) 445-600.
    • (1995) Crit. Rev. Bioch. Mol. Biol. , vol.30 , pp. 445-600
    • Hayes, J.D.1    Pulford, D.J.2
  • 38
    • 21644475953 scopus 로고    scopus 로고
    • Analysis of the glutathione S-transferase (GST) gene family
    • Nebert, D. W. and Vasiliou, V. Analysis of the glutathione S-transferase (GST) gene family. Hum. Genomics1 (2004) 460-464.
    • (2004) Hum. Genomics , vol.1 , pp. 460-464
    • Nebert, D.W.1    Vasiliou, V.2
  • 39
  • 41
    • 8844271052 scopus 로고    scopus 로고
    • A novel high-molecularweight glutenin subunit gene Ee1.5 from Elytrigia elongate (Host) Nevski
    • Wang, J. R., Yan, Z. H., Wei, Y. M. and Zheng, Y. L. A novel high-molecularweight glutenin subunit gene Ee1. 5 from Elytrigia elongate (Host) Nevski. J. Cereal Sci. 40 (2004) 289-294.
    • (2004) J. Cereal Sci. , vol.40 , pp. 289-294
    • Wang, J.R.1    Yan, Z.H.2    Wei, Y.M.3    Zheng, Y.L.4
  • 42
    • 0242556837 scopus 로고    scopus 로고
    • Plant biology cytosolic HSP90 associates with and modulates the Arabidopsis RPM1 disease resistance protein
    • Hubert, D. A., Tornero, P., Belkhadir, Y., Krishna, P., Takahashi, A., Shirasu, K. and Dang, J. L. Plant biology cytosolic HSP90 associates with and modulates the Arabidopsis RPM1 disease resistance protein. EMBO J. 22 (2003) 5679-5689.
    • (2003) EMBO J. , vol.22 , pp. 5679-5689
    • Hubert, D.A.1    Tornero, P.2    Belkhadir, Y.3    Krishna, P.4    Takahashi, A.5    Shirasu, K.6    Dang, J.L.7
  • 43
    • 79959848997 scopus 로고    scopus 로고
    • Molecular analysis of common wheat genes encoding three types of cytosolic heat shock protein 90 (Hsp90): functional involvement of cytosolic Hsp90s in the control of wheat seedling growth and disease resistance
    • Wang, G. F., Wei, X., Fan, R., Zhou, H., Wang, X., Yu, C., Dong, L., Dong, Z., Wang, X., Kang, Z., Ling, H., Shen, Q. H., Wang, D. and Zhang, X. Molecular analysis of common wheat genes encoding three types of cytosolic heat shock protein 90 (Hsp90): functional involvement of cytosolic Hsp90s in the control of wheat seedling growth and disease resistance. New Phytol. 191 (2011) 418-431.
    • (2011) New Phytol. , vol.191 , pp. 418-431
    • Wang, G.F.1    Wei, X.2    Fan, R.3    Zhou, H.4    Wang, X.5    Yu, C.6    Dong, L.7    Dong, Z.8    Wang, X.9    Kang, Z.10    Ling, H.11    Shen, Q.H.12    Wang, D.13    Zhang, X.14
  • 44
    • 33845793939 scopus 로고    scopus 로고
    • Microarray analysis of Fusarium graminearum-induced wheat genes: identification of organspecific and differentially expressed genes
    • Golkari, S., Gilbert, J., Prashar, S. and Procunier, J. D. Microarray analysis of Fusarium graminearum-induced wheat genes: identification of organspecific and differentially expressed genes. Plant Biotechnol. J. 5 (2007) 38-49.
    • (2007) Plant Biotechnol. J. , vol.5 , pp. 38-49
    • Golkari, S.1    Gilbert, J.2    Prashar, S.3    Procunier, J.D.4
  • 45
    • 79957595770 scopus 로고    scopus 로고
    • A novel transcription factor, ERD15 (Early Responsive to Dehydration 15), connects endoplasmic reticulum stress with an osmotic stress-induced cell death signal
    • Alves, M. S., Reis, P. A. B., Dadalto, S. P., Faria, J. A. Q. A., Fontes, E. P. and Fietto, L. G. A novel transcription factor, ERD15 (Early Responsive to Dehydration 15), connects endoplasmic reticulum stress with an osmotic stress-induced cell death signal. J. Biol. Chem. 286 (2011) 20020-20030.
    • (2011) J. Biol. Chem. , vol.286 , pp. 20020-20030
    • Alves, M.S.1    Reis, P.A.B.2    Dadalto, S.P.3    Faria, J.A.Q.A.4    Fontes, E.P.5    Fietto, L.G.6
  • 46
    • 36248949141 scopus 로고    scopus 로고
    • The endoplasmic reticulum and the unfolded protein response
    • Malhotra, J. D. and Kaufman, R. J. The endoplasmic reticulum and the unfolded protein response. Semin. Cell. Dev. Biol. 18 (2007) 716-731.
    • (2007) Semin. Cell. Dev. Biol. , vol.18 , pp. 716-731
    • Malhotra, J.D.1    Kaufman, R.J.2
  • 47
    • 70449729693 scopus 로고    scopus 로고
    • The endoplasmic reticulum stress signaling pathways in plants
    • Urade, R. The endoplasmic reticulum stress signaling pathways in plants. Biofactors35 (2009) 326-331.
    • (2009) Biofactors , vol.35 , pp. 326-331
    • Urade, R.1
  • 48
    • 33846080714 scopus 로고    scopus 로고
    • Agronomic performance and transcriptional analysis of carotenoid biosynthesis in fruits of transgenic HighCaro and control tomato lines under field conditions
    • Giorio, G., Stigliani, A. L. and D'Ambrosio, C. Agronomic performance and transcriptional analysis of carotenoid biosynthesis in fruits of transgenic HighCaro and control tomato lines under field conditions. Transgenic Res. 16 (2007) 15-28.
    • (2007) Transgenic Res. , vol.16 , pp. 15-28
    • Giorio, G.1    Stigliani, A.L.2    D'Ambrosio, C.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.