-
1
-
-
23144431920
-
TOUCAN 2: The all-inclusive open source workbench for regulatory sequence analysis
-
Aerts S, Van Loo P, Thijs G, Mayer H, de Martin R, Moreau Y, De Moor B (2005) TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis. Nucleic Acids Res 33: W393-W396
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Aerts, S.1
Van Loo, P.2
Thijs, G.3
Mayer, H.4
de Martin, R.5
Moreau, Y.6
De Moor, B.7
-
2
-
-
84868212462
-
A zinc finger protein gene ZFP5 integrates phytohormone signaling to control root hair development in Arabi- dopsis
-
An L, Zhou Z, Sun L, Yan A, Xi W, Yu N, Cai W, Chen X, Yu H, Schiefelbein J, et al (2012) A zinc finger protein gene ZFP5 integrates phytohormone signaling to control root hair development in Arabi- dopsis. Plant J 72: 474-490
-
(2012)
Plant J
, vol.72
, pp. 474-490
-
-
An, L.1
Zhou, Z.2
Sun, L.3
Yan, A.4
Xi, W.5
Yu, N.6
Cai, W.7
Chen, X.8
Yu, H.9
Schiefelbein, J.10
-
3
-
-
77958471357
-
Differential expression analysis for sequence count data
-
Anders S, Huber W (2010) Differential expression analysis for sequence count data. Genome Biol 11: R106
-
(2010)
Genome Biol
, vol.11
-
-
Anders, S.1
Huber, W.2
-
4
-
-
84857495671
-
Two-component elements mediate interactions between cytokinin and salicylic acid in plant immunity
-
Argueso CT, Ferreira FJ, Epple P, To JP, Hutchison CE, Schaller GE, Dangl JL, Kieber JJ (2012) Two-component elements mediate interactions between cytokinin and salicylic acid in plant immunity. PLoS Genet 8: e1002448
-
(2012)
PLoS Genet
, vol.e1002448
, pp. 8
-
-
Argueso, C.T.1
Ferreira, F.J.2
Epple, P.3
To, J.P.4
Hutchison, C.E.5
Schaller, G.E.6
Dangl, J.L.7
Kieber, J.J.8
-
5
-
-
68249116328
-
Environmental perception avenues: The interaction of cytokinin and environmental response pathways
-
Argueso CT, Ferreira FJ, Kieber JJ (2009) Environmental perception avenues: the interaction of cytokinin and environmental response pathways. Plant Cell Environ 32: 1147-1160
-
(2009)
Plant Cell Environ
, vol.32
, pp. 1147-1160
-
-
Argueso, C.T.1
Ferreira, F.J.2
Kieber, J.J.3
-
7
-
-
57749104912
-
Type B response regulators of Arabidopsis play key roles in cytokinin signaling and plant development
-
Argyros RD, Mathews DE, Chiang YH, Palmer CM, Thibault DM, Etheridge N, Argyros DA, Mason MG, Kieber JJ, Schaller GE (2008) Type B response regulators of Arabidopsis play key roles in cytokinin signaling and plant development. Plant Cell 20: 2102-2116
-
(2008)
Plant Cell
, vol.20
, pp. 2102-2116
-
-
Argyros, R.D.1
Mathews, D.E.2
Chiang, Y.H.3
Palmer, C.M.4
Thibault, D.M.5
Etheridge, N.6
Argyros, D.A.7
Mason, M.G.8
Kieber, J.J.9
Schaller, G.E.10
-
8
-
-
79952304237
-
Cytokinin regulates the activity of reproductive meristems, flower organ size,ovule formation, and thus seed yield in Arabidopsis thaliana
-
Bartrina I, Otto E, Strnad M, Werner T, Schmülling T (2011) Cytokinin regulates the activity of reproductive meristems, flower organ size,ovule formation, and thus seed yield in Arabidopsis thaliana. Plant Cell 23: 69-80
-
(2011)
Plant Cell
, vol.23
, pp. 69-80
-
-
Bartrina, I.1
Otto, E.2
Strnad, M.3
Werner, T.4
Schmülling, T.5
-
9
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini Y, Hochberg Y (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing. JR Stat Soc 57: 289-300
-
(1995)
JR Stat Soc
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
10
-
-
79958037892
-
Phloem- transported cytokinin regulates polar auxin transport and maintains vascular pattern in the root meristem
-
Bishopp A, Lehesranta S, Vatén A, Help H, El-Showk S, Scheres B, Helariutta K, Mahonen AP, Sakakibara H, Helariutta Y (2011) Phloem- transported cytokinin regulates polar auxin transport and maintains vascular pattern in the root meristem. Curr Biol 21: 927-932
-
(2011)
Curr Biol
, vol.21
, pp. 927-932
-
-
Bishopp, A.1
Lehesranta, S.2
Vatén, A.3
Help, H.4
El-Showk, S.5
Scheres, B.6
Helariutta, K.7
Mahonen, A.P.8
Sakakibara, H.9
Helariutta, Y.10
-
11
-
-
0032100921
-
Two genes with similarity to bacterial response regulators are rapidly and specifically induced by cytokinin in Arabidopsis
-
Brandstatter I, Kieber JJ (1998) Two genes with similarity to bacterial response regulators are rapidly and specifically induced by cytokinin in Arabidopsis. Plant Cell 10: 1009-1019
-
(1998)
Plant Cell
, vol.10
, pp. 1009-1019
-
-
Brandstatter, I.1
Kieber, J.J.2
-
13
-
-
33644800061
-
Immediate-early and delayed cytokinin response genes of Arabidopsis thaliana identified by genome-wide expression profiling reveal novel cytokinin-sensitive processes and suggest cytokinin action through transcriptional cascades
-
Brenner WG, Romanov GA, Kollmer I, Bürkle L, Schmülling T (2005) Immediate-early and delayed cytokinin response genes of Arabidopsis thaliana identified by genome-wide expression profiling reveal novel cytokinin-sensitive processes and suggest cytokinin action through transcriptional cascades. Plant J 44: 314-333
-
(2005)
Plant J
, vol.44
, pp. 314-333
-
-
Brenner, W.G.1
Romanov, G.A.2
Kollmer, I.3
Bürkle, L.4
Schmülling, T.5
-
14
-
-
84870829412
-
Transcript profiling of cytokinin action in Arabidopsis roots and shoots discovers largely similar but also organ- specific responses
-
Brenner WG, Schmülling T (2012) Transcript profiling of cytokinin action in Arabidopsis roots and shoots discovers largely similar but also organ- specific responses. BMC Plant Biol 12: 112
-
(2012)
BMC Plant Biol
, vol.12
, pp. 112
-
-
Brenner, W.G.1
Schmülling, T.2
-
15
-
-
0016746132
-
A method for combining non-independent, one-sided tests of significance
-
Brown M (1975) A method for combining non-independent, one-sided tests of significance. Biometrics 31: 987-992
-
(1975)
Biometrics
, vol.31
, pp. 987-992
-
-
Brown, M.1
-
16
-
-
84864748399
-
Hehl R (2012) 'MicroRNA Targets', a new AthaMap web-tool for genome-wide identification of miRNA targets in Arabidopsis thaliana
-
Bülow L, Bolivar JC, Ruhe J, Brill Y, Hehl R (2012) 'MicroRNA Targets', a new AthaMap web-tool for genome-wide identification of miRNA targets in Arabidopsis thaliana. BioData Min 5: 7
-
BioData Min
, vol.5
, pp. 7
-
-
Bülow, L.1
Bolivar, J.C.2
Ruhe, J.3
Brill, Y.4
-
17
-
-
58349111875
-
AmiGO: Online access to ontology and annotation data
-
Carbon S, Ireland A, Mungall CJ, Shu S, Marshall B, Lewis S (2009) AmiGO: online access to ontology and annotation data. Bioinformatics 25: 288-289
-
(2009)
Bioinformatics
, vol.25
, pp. 288-289
-
-
Carbon, S.1
Ireland, A.2
Mungall, C.J.3
Shu, S.4
Marshall, B.5
Lewis, S.6
-
18
-
-
18044369242
-
The Arabidopsis ATR1 Myb transcription factor controls indolic glucosinolate homeostasis
-
Celenza JL, Quiel JA, Smolen GA, Merrikh H, Silvestro AR, Normanly J, Bender J (2005) The Arabidopsis ATR1 Myb transcription factor controls indolic glucosinolate homeostasis. Plant Physiol 137: 253-262
-
(2005)
Plant Physiol
, vol.137
, pp. 253-262
-
-
Celenza, J.L.1
Quiel, J.A.2
Smolen, G.A.3
Merrikh, H.4
Silvestro, A.R.5
Normanly, J.6
Bender, J.7
-
19
-
-
78650096170
-
Meiosis-specific gene discovery in plants: RNA-seq applied to isolated Arabidopsis male meiocytes
-
Chen C, Farmer AD, Langley RJ, Mudge J, Crow JA, May GD, Huntley J, Smith AG, Retzel EF (2010) Meiosis-specific gene discovery in plants: RNA-seq applied to isolated Arabidopsis male meiocytes. BMC Plant Biol 10: 280
-
(2010)
BMC Plant Biol
, vol.10
, pp. 280
-
-
Chen, C.1
Farmer, A.D.2
Langley, R.J.3
Mudge, J.4
Crow, J.A.5
May, G.D.6
Huntley, J.7
Smith, A.G.8
Retzel, E.F.9
-
20
-
-
67649197934
-
Ratio adjustment and calibration scheme for gene-wise normalization to enhance microarray inter-study prediction
-
Cheng C, Shen K, Song C, Luo J, Tseng GC (2009) Ratio adjustment and calibration scheme for gene-wise normalization to enhance microarray inter-study prediction. Bioinformatics 25: 1655-1661
-
(2009)
Bioinformatics
, vol.25
, pp. 1655-1661
-
-
Cheng, C.1
Shen, K.2
Song, C.3
Luo, J.4
Tseng, G.C.5
-
21
-
-
84865847682
-
Functional characterization of the GATA transcription factors GNC and CGA1 reveals their key role in chloroplast development, growth, and division in Arabidopsis
-
Chiang YH, Zubo YO, Tapken W, Kim HJ, Lavanway AM, Howard L, Pilon M, Kieber JJ, Schaller GE (2012) Functional characterization of the GATA transcription factors GNC and CGA1 reveals their key role in chloroplast development, growth, and division in Arabidopsis. Plant Physiol 160: 332-348
-
(2012)
Plant Physiol
, vol.160
, pp. 332-348
-
-
Chiang, Y.H.1
Zubo, Y.O.2
Tapken, W.3
Kim, H.J.4
Lavanway, A.M.5
Howard, L.6
Pilon, M.7
Kieber, J.J.8
Schaller, G.E.9
-
22
-
-
77955585761
-
The cytokinin-activated transcription factor ARR2 promotes plant immunity via TGA3/NPR1-dependent salicylic acid signaling in Arabidopsis
-
Choi J, Huh SU, Kojima M, Sakakibara H, Paek KH, Hwang I (2010) The cytokinin-activated transcription factor ARR2 promotes plant immunity via TGA3/NPR1-dependent salicylic acid signaling in Arabidopsis. Dev Cell 19: 284-295
-
(2010)
Dev Cell
, vol.19
, pp. 284-295
-
-
Choi, J.1
Huh, S.U.2
Kojima, M.3
Sakakibara, H.4
Paek, K.H.5
Hwang, I.6
-
23
-
-
84870983464
-
The Arabi- dopsis F-box/Kelch-repeat protein At2g44130 is upregulated in giant cells and promotes nematode susceptibility
-
Curtis RH, Pankaj, Powers SJ, Napier J, Matthes MC (2013) The Arabi- dopsis F-box/Kelch-repeat protein At2g44130 is upregulated in giant cells and promotes nematode susceptibility. Mol Plant Microbe Interact 26: 36-43
-
(2013)
Mol Plant Microbe Interact
, vol.26
, pp. 36-43
-
-
Curtis, R.H.1
Pankaj2
Powers, S.J.3
Napier, J.4
Matthes, M.C.5
-
24
-
-
0034521743
-
Characterization of the response of the Arabidopsis response regulator gene family to cytokinin
-
D'Agostino IB, Deruère J, Kieber JJ (2000) Characterization of the response of the Arabidopsis response regulator gene family to cytokinin. Plant Physiol 124: 1706-1717
-
(2000)
Plant Physiol
, vol.124
, pp. 1706-1717
-
-
D'agostino, I.B.1
Deruère, J.2
Kieber, J.J.3
-
25
-
-
0029170848
-
Induction of anthocyanin accumulation by cytokinins in Arabidopsis thaliana
-
Deikman J, Hammer PE (1995) Induction of anthocyanin accumulation by cytokinins in Arabidopsis thaliana. Plant Physiol 108: 47-57
-
(1995)
Plant Physiol
, vol.108
, pp. 47-57
-
-
Deikman, J.1
Hammer, P.E.2
-
26
-
-
38649083127
-
Emerging role of cytokinin as a regulator of cellular differentiation
-
Dello Ioio R, Linhares FS, Sabatini S (2008) Emerging role of cytokinin as a regulator of cellular differentiation. Curr Opin Plant Biol 11: 23-27
-
(2008)
Curr Opin Plant Biol
, vol.11
, pp. 23-27
-
-
Dello Ioio, R.1
Linhares, F.S.2
Sabatini, S.3
-
27
-
-
79957467259
-
Arabidopsis thaliana calcium-dependent lipid-binding protein (AtCLB): A novel repressor of abiotic stress response
-
de Silva K, Laska B, Brown C, Sederoff HW, Khodakovskaya M (2011) Arabidopsis thaliana calcium-dependent lipid-binding protein (AtCLB): a novel repressor of abiotic stress response. J Exp Bot 62: 2679-2689
-
(2011)
J Exp Bot
, vol.62
, pp. 2679-2689
-
-
de Silva, K.1
Laska, B.2
Brown, C.3
Sederoff, H.W.4
Khodakovskaya, M.5
-
28
-
-
77952997562
-
Prevalence of alternative splicing choices in Arabidopsis thaliana
-
English AC, Patel KS, Loraine AE (2010) Prevalence of alternative splicing choices in Arabidopsis thaliana. BMC Plant Biol 10: 102
-
(2010)
BMC Plant Biol
, vol.10
, pp. 102
-
-
English, A.C.1
Patel, K.S.2
Loraine, A.E.3
-
29
-
-
74949084336
-
Genome-wide mapping of alternative splicing in Arabidopsis thaliana
-
Filichkin SA, Priest HD, Givan SA, Shen R, Bryant DW, Fox SE, Wong WK, Mockler TC (2010) Genome-wide mapping of alternative splicing in Arabidopsis thaliana. Genome Res 20: 45-58
-
(2010)
Genome Res
, vol.20
, pp. 45-58
-
-
Filichkin, S.A.1
Priest, H.D.2
Givan, S.A.3
Shen, R.4
Bryant, D.W.5
Fox, S.E.6
Wong, W.K.7
Mockler, T.C.8
-
30
-
-
26944467547
-
Identification of a novel cis-element exhibiting cytokinin-dependent protein binding in vitro in the 5'-region of NADPH-protochlorophyllide oxidore- ductase gene in cucumber
-
Fusada N, Masuda T, Kuroda H, Shimada H, Ohta H, Takamiya K (2005) Identification of a novel cis-element exhibiting cytokinin-dependent protein binding in vitro in the 5'-region of NADPH-protochlorophyllide oxidore- ductase gene in cucumber. Plant Mol Biol 59: 631-645
-
(2005)
Plant Mol Biol
, vol.59
, pp. 631-645
-
-
Fusada, N.1
Masuda, T.2
Kuroda, H.3
Shimada, H.4
Ohta, H.5
Takamiya, K.6
-
31
-
-
40449100030
-
Direct multiplexed measurement of gene expression with color-coded probe pairs
-
Geiss GK, Bumgarner RE, Birditt B, Dahl T, Dowidar N, Dunaway DL, Fell HP, Ferree S, George RD, Grogan T, et al (2008) Direct multiplexed measurement of gene expression with color-coded probe pairs. Nat Bio- technol 26: 317-325
-
(2008)
Nat Bio- Technol
, vol.26
, pp. 317-325
-
-
Geiss, G.K.1
Bumgarner, R.E.2
Birditt, B.3
Dahl, T.4
Dowidar, N.5
Dunaway, D.L.6
Fell, H.P.7
Ferree, S.8
George, R.D.9
Grogan, T.10
-
32
-
-
28744458859
-
Bioconductor: Open software development for computational biology and bioinformatics
-
Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, et al (2004) Bioconductor: open software development for computational biology and bioinformatics. Genome Biol 5: R80
-
(2004)
Genome Biol
, vol.5
-
-
Gentleman, R.C.1
Carey, V.J.2
Bates, D.M.3
Bolstad, B.4
Dettling, M.5
Dudoit, S.6
Ellis, B.7
Gautier, L.8
Ge, Y.9
Gentry, J.10
-
33
-
-
35348861423
-
Large-scale, lineage-specific expansion of a bric-a-brac/tramtrack/broad complex ubiquitin-ligase gene family in rice
-
Gingerich DJ, Hanada K, Shiu SH, Vierstra RD (2007) Large-scale, lineage-specific expansion of a bric-a-brac/tramtrack/broad complex ubiquitin-ligase gene family in rice. Plant Cell 19: 2329-2348
-
(2007)
Plant Cell
, vol.19
, pp. 2329-2348
-
-
Gingerich, D.J.1
Hanada, K.2
Shiu, S.H.3
Vierstra, R.D.4
-
34
-
-
47749083127
-
The At- GenExpress hormone and chemical treatment data set: Experimental design, data evaluation, model data analysis and data access
-
Goda H, Sasaki E, Akiyama K, Maruyama-Nakashita A, Nakabayashi K, Li W, Ogawa M, Yamauchi Y, Preston J, Aoki K, et al (2008) The At- GenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access. Plant J 55: 526-542
-
(2008)
Plant J
, vol.55
, pp. 526-542
-
-
Goda, H.1
Sasaki, E.2
Akiyama, K.3
Maruyama-Nakashita, A.4
Nakabayashi, K.5
Li, W.6
Ogawa, M.7
Yamauchi, Y.8
Preston, J.9
Aoki, K.10
-
35
-
-
79957580244
-
ALTERED MERISTEM PROGRAM 1 is involved in development of seed dormancy in Arabidopsis
-
Griffiths J, Barrero JM, Taylor J, Helliwell CA, Gubler F (2011) ALTERED MERISTEM PROGRAM 1 is involved in development of seed dormancy in Arabidopsis. PLoS ONE 6: e20408
-
(2011)
PLoS ONE
, vol.6
-
-
Griffiths, J.1
Barrero, J.M.2
Taylor, J.3
Helliwell, C.A.4
Gubler, F.5
-
36
-
-
84858592281
-
Mining Arabidopsis thaliana RNA-seq data with Integrated Genome Browser reveals stress-induced alternative splicing of the putative splicing regulator SR45a
-
Gulledge AA, Roberts AD, Vora H, Patel K, Loraine AE (2012) Mining Arabidopsis thaliana RNA-seq data with Integrated Genome Browser reveals stress-induced alternative splicing of the putative splicing regulator SR45a. Am J Bot 99: 219-231
-
(2012)
Am J Bot
, vol.99
, pp. 219-231
-
-
Gulledge, A.A.1
Roberts, A.D.2
Vora, H.3
Patel, K.4
Loraine, A.E.5
-
37
-
-
84861914418
-
Histidine kinase activity of the ethylene receptor ETR1 facilitates the ethylene response in Arabidopsis
-
Hall BP, Shakeel SN, Amir M, Ul Haq N, Qu X, Schaller GE (2012) Histidine kinase activity of the ethylene receptor ETR1 facilitates the ethylene response in Arabidopsis. Plant Physiol 159: 682-695
-
(2012)
Plant Physiol
, vol.159
, pp. 682-695
-
-
Hall, B.P.1
Shakeel, S.N.2
Amir, M.3
Ul Haq, N.4
Qu, X.5
Schaller, G.E.6
-
38
-
-
51549100895
-
The transcriptional repressor ARR1-SRDX suppresses pleio- tropic cytokinin activities in Arabidopsis
-
Heyl A, Ramireddy E, Brenner WG, Riefler M, Allemeersch J, Schmülling T (2008) The transcriptional repressor ARR1-SRDX suppresses pleio- tropic cytokinin activities in Arabidopsis. Plant Physiol 147: 1380-1395
-
(2008)
Plant Physiol
, vol.147
, pp. 1380-1395
-
-
Heyl, A.1
Ramireddy, E.2
Brenner, W.G.3
Riefler, M.4
Allemeersch, J.5
Schmülling, T.6
-
39
-
-
0037177855
-
Transcript abundance in yeast varies over six orders of magnitude
-
Holland MJ (2002) Transcript abundance in yeast varies over six orders of magnitude. J Biol Chem 277: 14363-14366
-
(2002)
J Biol Chem
, vol.277
, pp. 14363-14366
-
-
Holland, M.J.1
-
40
-
-
79958768952
-
Enhanced cytokinin degradation in leaf primordia of transgenic Arabidopsis plants reduces leaf size and shoot organ primordia formation
-
Holst K, Schmülling T, Werner T (2011) Enhanced cytokinin degradation in leaf primordia of transgenic Arabidopsis plants reduces leaf size and shoot organ primordia formation. J Plant Physiol 168: 1328-1334
-
(2011)
J Plant Physiol
, vol.168
, pp. 1328-1334
-
-
Holst, K.1
Schmülling, T.2
Werner, T.3
-
41
-
-
0036743358
-
Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators
-
Hosoda K, Imamura A, Katoh E, Hatta T, Tachiki M, Yamada H, Mizuno T, Yamazaki T (2002) Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators. Plant Cell 14: 2015-2029
-
(2002)
Plant Cell
, vol.14
, pp. 2015-2029
-
-
Hosoda, K.1
Imamura, A.2
Katoh, E.3
Hatta, T.4
Tachiki, M.5
Yamada, H.6
Mizuno, T.7
Yamazaki, T.8
-
42
-
-
9144241791
-
N-Glucosylation of cyto- kinins by glycosyltransferases of Arabidopsis thaliana
-
Hou B, Lim EK, Higgins GS, Bowles DJ (2004) N-Glucosylation of cyto- kinins by glycosyltransferases of Arabidopsis thaliana. J Biol Chem 279: 47822-47832
-
(2004)
J Biol Chem
, vol.279
, pp. 47822-47832
-
-
Hou, B.1
Lim, E.K.2
Higgins, G.S.3
Bowles, D.J.4
-
43
-
-
0348050003
-
TDPOZ, a family of bipartite animal and plant proteins that contain the TRAF (TD) and POZ/BTB domains
-
Huang CJ, Chen CY, Chen HH, Tsai SF, Choo KB (2004) TDPOZ, a family of bipartite animal and plant proteins that contain the TRAF (TD) and POZ/BTB domains. Gene 324: 117-127
-
(2004)
Gene
, vol.324
, pp. 117-127
-
-
Huang, C.J.1
Chen, C.Y.2
Chen, H.H.3
Tsai, S.F.4
Choo, K.B.5
-
44
-
-
58549112996
-
Bioinformatics enrichment tools: Paths toward the comprehensive functional analysis of large gene lists
-
Huang da W, Sherman BT, Lempicki RA (2009) Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res 37: 1-13
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 1-13
-
-
Huang da, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
45
-
-
80755125987
-
GNC and CGA1 modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression in Arabidopsis
-
Hudson D, Guevara D, Yaish MW, Hannam C, Long N, Clarke JD, Bi YM, Rothstein SJ (2011) GNC and CGA1 modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression in Arabidopsis. PLoS ONE 6: e26765
-
(2011)
PLoS ONE
, vol.6
-
-
Hudson, D.1
Guevara, D.2
Yaish, M.W.3
Hannam, C.4
Long, N.5
Clarke, J.D.6
Bi, Y.M.7
Rothstein, S.J.8
-
46
-
-
0037325776
-
In vivo and in vitro characterization of the ARR11 response regulator implicated in the His-to-Asp phosphorelay signal transduction in Arabidopsis thaliana
-
Imamura A, Kiba T, Tajima Y, Yamashino T, Mizuno T (2003) In vivo and in vitro characterization of the ARR11 response regulator implicated in the His-to-Asp phosphorelay signal transduction in Arabidopsis thaliana. Plant Cell Physiol 44: 122-131
-
(2003)
Plant Cell Physiol
, vol.44
, pp. 122-131
-
-
Imamura, A.1
Kiba, T.2
Tajima, Y.3
Yamashino, T.4
Mizuno, T.5
-
47
-
-
4644308960
-
Arabidopsis response regulator, ARR22, ectopic expression of which results in phenotypes similar to the wol cytokinin-receptor mutant
-
Kiba T, Aoki K, Sakakibara H, Mizuno T (2004) Arabidopsis response regulator, ARR22, ectopic expression of which results in phenotypes similar to the wol cytokinin-receptor mutant. Plant Cell Physiol 45: 1063-1077
-
(2004)
Plant Cell Physiol
, vol.45
, pp. 1063-1077
-
-
Kiba, T.1
Aoki, K.2
Sakakibara, H.3
Mizuno, T.4
-
48
-
-
84903578151
-
-
The Arabidopsis Book
-
Kieber JJ (2002) Cytokinins. The Arabidopsis Book 1: e0063,
-
(2002)
Cytokinins
, vol.1
-
-
Kieber, J.J.1
-
49
-
-
78049438915
-
Methods for combining multiple genome- wide linkage studies
-
Kippola TA, Santorico SA (2010) Methods for combining multiple genome- wide linkage studies. Methods Mol Biol 620: 541-560
-
(2010)
Methods Mol Biol
, vol.620
, pp. 541-560
-
-
Kippola, T.A.1
Santorico, S.A.2
-
50
-
-
79958769691
-
Ectopic expression of different cytokinin-regulated transcription factor genes of Arabidopsis thaliana alters plant growth and development
-
Kollmer I, Werner T, Schmülling T (2011) Ectopic expression of different cytokinin-regulated transcription factor genes of Arabidopsis thaliana alters plant growth and development. J Plant Physiol 168: 1320-1327
-
(2011)
J Plant Physiol
, vol.168
, pp. 1320-1327
-
-
Kollmer, I.1
Werner, T.2
Schmülling, T.3
-
51
-
-
0034016594
-
Expression of NADPH-Protochlorophyllide oxidoreductase gene in fully green leaves of cucumber
-
Kuroda H, Masuda T, Fusada N, Ohta H, Takamiya K (2000) Expression of NADPH-Protochlorophyllide oxidoreductase gene in fully green leaves of cucumber. Plant Cell Physiol 41: 226-229
-
(2000)
Plant Cell Physiol
, vol.41
, pp. 226-229
-
-
Kuroda, H.1
Masuda, T.2
Fusada, N.3
Ohta, H.4
Takamiya, K.5
-
52
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead B, Trapnell C, Pop M, Salzberg SL (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10: R25
-
(2009)
Genome Biol
, vol.10
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
53
-
-
84555209313
-
Glutaredoxin GRXS13 plays a key role in protection against photooxi- dative stress in Arabidopsis
-
Laporte D, Olate E, Salinas P, Salazar M, Jordana X, Holuigue L (2012) Glutaredoxin GRXS13 plays a key role in protection against photooxi- dative stress in Arabidopsis. J Exp Bot 63: 503-515
-
(2012)
J Exp Bot
, vol.63
, pp. 503-515
-
-
Laporte, D.1
Olate, E.2
Salinas, P.3
Salazar, M.4
Jordana, X.5
Holuigue, L.6
-
54
-
-
33846818909
-
Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7 (ARR7) overexpression in cytokinin response
-
Lee DJ, Park JY, Ku SJ, Ha YM, Kim S, Kim MD, Oh MH, Kim J (2007) Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7 (ARR7) overexpression in cytokinin response. Mol Genet Genomics 277: 115-137
-
(2007)
Mol Genet Genomics
, vol.277
, pp. 115-137
-
-
Lee, D.J.1
Park, J.Y.2
Ku, S.J.3
Ha, Y.M.4
Kim, S.5
Kim, M.D.6
Oh, M.H.7
Kim, J.8
-
55
-
-
64749113145
-
Drought stress- induced Rma1H1, a RING membrane-anchor E3 ubiquitin ligase homolog, regulates aquaporin levels via ubiquitination in transgenic Arabi- dopsis plants
-
Lee HK, Cho SK, Son O, Xu Z, Hwang I, Kim WT (2009) Drought stress- induced Rma1H1, a RING membrane-anchor E3 ubiquitin ligase homolog, regulates aquaporin levels via ubiquitination in transgenic Arabi- dopsis plants. Plant Cell 21: 622-641
-
(2009)
Plant Cell
, vol.21
, pp. 622-641
-
-
Lee, H.K.1
Cho, S.K.2
Son, O.3
Xu, Z.4
Hwang, I.5
Kim, W.T.6
-
56
-
-
79951993896
-
Tabix: Fast retrieval of sequence features from generic TAB- delimited files
-
Li H (2011) Tabix: fast retrieval of sequence features from generic TAB- delimited files. Bioinformatics 27: 718-719
-
(2011)
Bioinformatics
, vol.27
, pp. 718-719
-
-
Li, H.1
-
57
-
-
68549104404
-
The Sequence Alignment/Map format and SAMtools
-
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics 25: 2078-2079
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
Homer, N.6
Marth, G.7
Abecasis, G.8
Durbin, R.9
-
58
-
-
79954528762
-
Overexpression of an AP2/ERF-type transcription factor CRF5 confers pathogen resistance to Arabidopsis plants
-
Liang YS, Ermawati N, Cha JY, Jung MH, Su'udi M, Kim MG, Ha SH, Park CG, Son D (2010) Overexpression of an AP2/ERF-type transcription factor CRF5 confers pathogen resistance to Arabidopsis plants. J Korean Soc Appl Biol Chem 53: 142-148
-
(2010)
J Korean Soc Appl Biol Chem
, vol.53
, pp. 142-148
-
-
Liang, Y.S.1
Ermawati, N.2
Cha, J.Y.3
Jung, M.H.4
Su'udi, M.5
Kim, M.G.6
Ha, S.H.7
Park, C.G.8
Son, D.9
-
59
-
-
77951988135
-
HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana
-
Licausi F, van Dongen JT, Giuntoli B, Novi G, Santaniello A, Geigenberger P, Perata P (2010) HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana. Plant J 62: 302-315
-
(2010)
Plant J
, vol.62
, pp. 302-315
-
-
Licausi, F.1
van Dongen, J.T.2
Giuntoli, B.3
Novi, G.4
Santaniello, A.5
Geigenberger, P.6
Perata, P.7
-
60
-
-
33645999355
-
S-Adenosylmethionine: Jack of all trades and master of everything?
-
Loenen WA (2006) S-Adenosylmethionine: jack of all trades and master of everything? Biochem Soc Trans 34: 330-333
-
(2006)
Biochem Soc Trans
, vol.34
, pp. 330-333
-
-
Loenen, W.A.1
-
61
-
-
77956277181
-
Function annotation of the rice transcriptome at singlenucleotide resolution by RNA-seq
-
Lu T, Lu G, Fan D, Zhu C, Li W, Zhao Q, Feng Q, Zhao Y, Guo Y, Li W, et al (2010) Function annotation of the rice transcriptome at singlenucleotide resolution by RNA-seq. Genome Res 20: 1238-1249
-
(2010)
Genome Res
, vol.20
, pp. 1238-1249
-
-
Lu, T.1
Lu, G.2
Fan, D.3
Zhu, C.4
Li, W.5
Zhao, Q.6
Feng, Q.7
Zhao, Y.8
Guo, Y.9
Li, W.10
-
62
-
-
77049124584
-
Multiplexed measurements of gene signatures in different analytes using the Nanostring nCounter Assay System
-
Malkov VA, Serikawa KA, Balantac N, Watters J, Geiss G, Mashadi- Hossein A, Fare T (2009) Multiplexed measurements of gene signatures in different analytes using the Nanostring nCounter Assay System. BMC Res Notes 2: 80
-
(2009)
BMC Res Notes
, vol.2
, pp. 80
-
-
Malkov, V.A.1
Serikawa, K.A.2
Balantac, N.3
Watters, J.4
Geiss, G.5
Mashadi- hossein, A.6
Fare, T.7
-
63
-
-
68249152549
-
BT2, a BTB protein, mediates multiple responses to nutrients, stresses, and hormones in Arabidopsis
-
Mandadi KK, Misra A, Ren S, McKnight TD (2009) BT2, a BTB protein, mediates multiple responses to nutrients, stresses, and hormones in Arabidopsis. Plant Physiol 150: 1930-1939
-
(2009)
Plant Physiol
, vol.150
, pp. 1930-1939
-
-
Mandadi, K.K.1
Misra, A.2
Ren, S.3
McKnight, T.D.4
-
64
-
-
3042579003
-
Type-B response regulators display overlapping expression patterns in Arabi- dopsis
-
Mason MG, Li J, Mathews DE, Kieber JJ, Schaller GE (2004) Type-B response regulators display overlapping expression patterns in Arabi- dopsis. Plant Physiol 135: 927-937
-
(2004)
Plant Physiol
, vol.135
, pp. 927-937
-
-
Mason, M.G.1
Li, J.2
Mathews, D.E.3
Kieber, J.J.4
Schaller, G.E.5
-
65
-
-
33644640571
-
Multiple type-B response regulators mediate cytokinin signal transduction in Arabidopsis
-
Mason MG, Mathews DE, Argyros DA, Maxwell BB, Kieber JJ, Alonso JM, Ecker JR, Schaller GE (2005) Multiple type-B response regulators mediate cytokinin signal transduction in Arabidopsis. Plant Cell 17:3007-3018
-
(2005)
Plant Cell
, vol.17
, pp. 3007-3018
-
-
Mason, M.G.1
Mathews, D.E.2
Argyros, D.A.3
Maxwell, B.B.4
Kieber, J.J.5
Alonso, J.M.6
Ecker, J.R.7
Schaller, G.E.8
-
66
-
-
0242515793
-
A novel ER- derived compartment, the ER body, selectively accumulates a beta- glucosidase with an ER-retention signal in Arabidopsis
-
Matsushima R, Kondo M, Nishimura M, Hara-Nishimura I (2003) A novel ER- derived compartment, the ER body, selectively accumulates a beta- glucosidase with an ER-retention signal in Arabidopsis. Plant J 33: 493-502
-
(2003)
Plant J
, vol.33
, pp. 493-502
-
-
Matsushima, R.1
Kondo, M.2
Nishimura, M.3
Hara-Nishimura, I.4
-
67
-
-
84861862669
-
SOCS2- induced proteasome-dependent TRAF6 degradation: A common antiinflammatory pathway for control of innate immune responses
-
McBerry C, Gonzalez RM, Shryock N, Dias A, Aliberti J (2012) SOCS2- induced proteasome-dependent TRAF6 degradation: a common antiinflammatory pathway for control of innate immune responses. PLoS ONE 7: e38384
-
(2012)
PLoS ONE
, vol.7
-
-
McBerry, C.1
Gonzalez, R.M.2
Shryock, N.3
Dias, A.4
Aliberti, J.5
-
68
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNA-seq
-
Mortazavi A, Williams BA, McCue K, Schaeffer L, Wold B (2008) Mapping and quantifying mammalian transcriptomes by RNA-seq. Nat Methods 5: 621-628
-
(2008)
Nat Methods
, vol.5
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
70
-
-
45749109424
-
Cytokinin and auxin interaction in root stem-cell specification during early embryogenesis
-
Müller B, Sheen J (2008) Cytokinin and auxin interaction in root stem-cell specification during early embryogenesis. Nature 453: 1094-1097
-
(2008)
Nature
, vol.453
, pp. 1094-1097
-
-
Müller, B.1
Sheen, J.2
-
71
-
-
70449350754
-
The NADPH-oxidase AtrbohB plays a role in Arabidopsis seed after ripening
-
Müller K, Carstens AC, Linkies A, Torres MA, Leubner-Metzger G (2009) The NADPH-oxidase AtrbohB plays a role in Arabidopsis seed after ripening. New Phytol 184: 885-897
-
(2009)
New Phytol
, vol.184
, pp. 885-897
-
-
Müller, K.1
Carstens, A.C.2
Linkies, A.3
Torres, M.A.4
Leubner-Metzger, G.5
-
72
-
-
84982358134
-
A revised medium for the rapid growth and bio assays with tobacco tissue cultures
-
Murashige T, Skoog F (1962) A revised medium for the rapid growth and bio assays with tobacco tissue cultures. Physiol Plant 15: 473-497
-
(1962)
Physiol Plant
, vol.15
, pp. 473-497
-
-
Murashige, T.1
Skoog, F.2
-
73
-
-
34347380950
-
A link between cytokinin and ASL9 (ASYMMETRIC LEAVES 2 LIKE 9) that belongs to the AS2/LOB (LATERAL ORGAN BOUNDARIES) family genes in Arabidopsis thaliana
-
Naito T, Yamashino T, Kiba T, Koizumi N, Kojima M, Sakakibara H, Mizuno T (2007) A link between cytokinin and ASL9 (ASYMMETRIC LEAVES 2 LIKE 9) that belongs to the AS2/LOB (LATERAL ORGAN BOUNDARIES) family genes in Arabidopsis thaliana. Biosci Biotechnol Biochem 71: 1269-1278
-
(2007)
Biosci Biotechnol Biochem
, vol.71
, pp. 1269-1278
-
-
Naito, T.1
Yamashino, T.2
Kiba, T.3
Koizumi, N.4
Kojima, M.5
Sakakibara, H.6
Mizuno, T.7
-
74
-
-
84855485205
-
Investigating meta-approaches for reconstructing gene networks in a mammalian cellular context
-
Nazri A, Lio P (2012) Investigating meta-approaches for reconstructing gene networks in a mammalian cellular context. PLoS ONE 7: e28713
-
(2012)
PLoS ONE
, vol.7
-
-
Nazri, A.1
Lio, P.2
-
75
-
-
70349739736
-
The Integrated Genome Browser: Free software for distribution and exploration of genome-scale datasets
-
Nicol JW, Helt GA, Blanchard SG Jr, Raja A, Loraine AE (2009) The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets. Bioinformatics 25: 2730-2731
-
(2009)
Bioinformatics
, vol.25
, pp. 2730-2731
-
-
Nicol, J.W.1
Helt, G.A.2
Blanchard Jr., S.G.3
Raja, A.4
Loraine, A.E.5
-
76
-
-
79960876096
-
Analysis of cytokinin mutants and regulation of cytokinin metabolic genes reveals important regulatory roles of cytokinins in drought, salt and abscisic acid responses, and abscisic acid biosynthesis
-
Nishiyama R, Watanabe Y, Fujita Y, Le DT, Kojima M, Werner T, Vankova R, Yamaguchi-Shinozaki K, Shinozaki K, Kakimoto T, et al (2011) Analysis of cytokinin mutants and regulation of cytokinin metabolic genes reveals important regulatory roles of cytokinins in drought, salt and abscisic acid responses, and abscisic acid biosynthesis. Plant Cell 23: 2169-2183
-
(2011)
Plant Cell
, vol.23
, pp. 2169-2183
-
-
Nishiyama, R.1
Watanabe, Y.2
Fujita, Y.3
Le, D.T.4
Kojima, M.5
Werner, T.6
Vankova, R.7
Yamaguchi-Shinozaki, K.8
Shinozaki, K.9
Kakimoto, T.10
-
77
-
-
70349238696
-
The PLASTID DIVISION1 and 2 components of the chloroplast division machinery determine the rate of chloroplast division in land plant cell differentiation
-
Okazaki K, Kabeya Y, Suzuki K, Mori T, Ichikawa T, Matsui M, Nakanishi H, Miyagishima SY (2009) The PLASTID DIVISION1 and 2 components of the chloroplast division machinery determine the rate of chloroplast division in land plant cell differentiation. Plant Cell 21: 1769-1780
-
(2009)
Plant Cell
, vol.21
, pp. 1769-1780
-
-
Okazaki, K.1
Kabeya, Y.2
Suzuki, K.3
Mori, T.4
Ichikawa, T.5
Matsui, M.6
Nakanishi, H.7
Miyagishima, S.Y.8
-
78
-
-
84858059041
-
A metaanalysis of caloric restriction gene expression profiles to infer common signatures and regulatory mechanisms
-
Plank M, Wuttke D, van Dam S, Clarke SA, de Magalhaes JP (2012) A metaanalysis of caloric restriction gene expression profiles to infer common signatures and regulatory mechanisms. Mol Biosyst 8: 1339-1349
-
(2012)
Mol Biosyst
, vol.8
, pp. 1339-1349
-
-
Plank, M.1
Wuttke, D.2
van Dam, S.3
Clarke, S.A.4
de Magalhaes, J.P.5
-
79
-
-
34447098485
-
Dirigent proteins in conifer defense II: Extended gene discovery, phylogeny, and constitutive and stress-induced gene expression in spruce (Picea spp.)
-
Ralph SG, Jancsik S, Bohlmann J (2007) Dirigent proteins in conifer defense II: extended gene discovery, phylogeny, and constitutive and stress-induced gene expression in spruce (Picea spp.). Phytochemistry 68: 1975-1991
-
(2007)
Phytochemistry
, vol.68
, pp. 1975-1991
-
-
Ralph, S.G.1
Jancsik, S.2
Bohlmann, J.3
-
81
-
-
33746594511
-
A subset of Arabidopsis AP2 transcription factors mediates cytokinin responses in concert with a two-component pathway
-
Rashotte AM, Mason MG, Hutchison CE, Ferreira FJ, Schaller GE, Kieber JJ (2006) A subset of Arabidopsis AP2 transcription factors mediates cytokinin responses in concert with a two-component pathway. Proc Natl Acad Sci USA 103: 11081-11085
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 11081-11085
-
-
Rashotte, A.M.1
Mason, M.G.2
Hutchison, C.E.3
Ferreira, F.J.4
Schaller, G.E.5
Kieber, J.J.6
-
82
-
-
2342501846
-
Development and evaluation of an Arabidopsis whole genome Affymetrix probe array
-
Redman JC, Haas BJ, Tanimoto G, Town CD (2004) Development and evaluation of an Arabidopsis whole genome Affymetrix probe array. Plant J 38: 545-561
-
(2004)
Plant J
, vol.38
, pp. 545-561
-
-
Redman, J.C.1
Haas, B.J.2
Tanimoto, G.3
Town, C.D.4
-
83
-
-
33645749116
-
Arabidopsis cytokinin receptor mutants reveal functions in shoot growth, leaf senescence, seed size, germination, root development, and cytokinin metabolism
-
Riefler M, Novak O, Strnad M, Schmülling T (2006) Arabidopsis cytokinin receptor mutants reveal functions in shoot growth, leaf senescence, seed size, germination, root development, and cytokinin metabolism. Plant Cell 18: 40-54
-
(2006)
Plant Cell
, vol.18
, pp. 40-54
-
-
Riefler, M.1
Novak, O.2
Strnad, M.3
Schmülling, T.4
-
84
-
-
4043105590
-
Activation of the Oryza sativa non-symbiotic haemoglobin-2 promoter by the cytokinin-regulated transcription factor, ARR1
-
Ross EJ, Stone JM, Elowsky CG, Arredondo-Peter R, Klucas RV, Sarath G (2004) Activation of the Oryza sativa non-symbiotic haemoglobin-2 promoter by the cytokinin-regulated transcription factor, ARR1. J Exp Bot 55: 1721-1731
-
(2004)
J Exp Bot
, vol.55
, pp. 1721-1731
-
-
Ross, E.J.1
Stone, J.M.2
Elowsky, C.G.3
Arredondo-Peter, R.4
Klucas, R.V.5
Sarath, G.6
-
85
-
-
42949085825
-
The role of glutathione in photosynthetic organisms: Emerging functions for glutaredoxins and glutathionylation
-
Rouhier N, Lemaire SD, Jacquot JP (2008) The role of glutathione in photosynthetic organisms: emerging functions for glutaredoxins and glutathionylation. Annu Rev Plant Biol 59: 143-166
-
(2008)
Annu Rev Plant Biol
, vol.59
, pp. 143-166
-
-
Rouhier, N.1
Lemaire, S.D.2
Jacquot, J.P.3
-
86
-
-
0034488771
-
Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators
-
Sakai H, Aoyama T, Oka A (2000) Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators. Plant J 24: 703-711
-
(2000)
Plant J
, vol.24
, pp. 703-711
-
-
Sakai, H.1
Aoyama, T.2
Oka, A.3
-
87
-
-
55249096281
-
Cytokinins negatively regulate the root iron uptake machinery in Arabidopsis through a growth- dependent pathway
-
Séguéla M, Briat JF, Vert G, Curie C (2008) Cytokinins negatively regulate the root iron uptake machinery in Arabidopsis through a growth- dependent pathway. Plant J 55: 289-300
-
(2008)
Plant J
, vol.55
, pp. 289-300
-
-
Séguéla, M.1
Briat, J.F.2
Vert, G.3
Curie, C.4
-
88
-
-
84867393555
-
Arabidopsis clade I TGA transcription factors regulate plant defenses in an NPR1-independent fashion
-
Shearer HL, Cheng YT, Wang L, Liu J, Boyle P, Després C, Zhang Y, Li X, Fobert PR (2012) Arabidopsis clade I TGA transcription factors regulate plant defenses in an NPR1-independent fashion. Mol Plant Microbe Interact 25: 1459-1468
-
(2012)
Mol Plant Microbe Interact
, vol.25
, pp. 1459-1468
-
-
Shearer, H.L.1
Cheng, Y.T.2
Wang, L.3
Liu, J.4
Boyle, P.5
Després, C.6
Zhang, Y.7
Li, X.8
Fobert, P.R.9
-
89
-
-
84949071073
-
Chemical regulation of growth and organ formation in plant tissues cultured in vitro
-
Skoog F, Miller CO (1957) Chemical regulation of growth and organ formation in plant tissues cultured in vitro. Symp Soc Exp Biol 11: 118-130
-
(1957)
Symp Soc Exp Biol
, vol.11
, pp. 118-130
-
-
Skoog, F.1
Miller, C.O.2
-
90
-
-
1042291442
-
Comparative studies on the type-B response regulators revealing their distinctive properties in the His-to-Asp phosphorelay signal transduction of Arabidopsis thaliana
-
Tajima Y, Imamura A, Kiba T, Amano Y, Yamashino T, Mizuno T (2004) Comparative studies on the type-B response regulators revealing their distinctive properties in the His-to-Asp phosphorelay signal transduction of Arabidopsis thaliana. Plant Cell Physiol 45: 28-39
-
(2004)
Plant Cell Physiol
, vol.45
, pp. 28-39
-
-
Tajima, Y.1
Imamura, A.2
Kiba, T.3
Amano, Y.4
Yamashino, T.5
Mizuno, T.6
-
91
-
-
4744353831
-
Arabidopsis CYP735A1 and CYP735A2 encode cytokinin hydroxylases that catalyze the biosynthesis of trans-Zeatin
-
Takei K, Yamaya T, Sakakibara H (2004) Arabidopsis CYP735A1 and CYP735A2 encode cytokinin hydroxylases that catalyze the biosynthesis of trans-Zeatin. J Biol Chem 279: 41866-41872
-
(2004)
J Biol Chem
, vol.279
, pp. 41866-41872
-
-
Takei, K.1
Yamaya, T.2
Sakakibara, H.3
-
92
-
-
0032537514
-
Expression of Arabidopsis response regulator homologs is induced by cytokinins and nitrate
-
Taniguchi M, Kiba T, Sakakibara H, Ueguchi C, Mizuno T, Sugiyama T (1998) Expression of Arabidopsis response regulator homologs is induced by cytokinins and nitrate. FEBS Lett 429: 259-262
-
(1998)
FEBS Lett
, vol.429
, pp. 259-262
-
-
Taniguchi, M.1
Kiba, T.2
Sakakibara, H.3
Ueguchi, C.4
Mizuno, T.5
Sugiyama, T.6
-
93
-
-
33847195792
-
ARR1 directly activates cytokinin response genes that encode proteins with diverse regulatory functions
-
Taniguchi M, Sasaki N, Tsuge T, Aoyama T, Oka A (2007) ARR1 directly activates cytokinin response genes that encode proteins with diverse regulatory functions. Plant Cell Physiol 48: 263-277
-
(2007)
Plant Cell Physiol
, vol.48
, pp. 263-277
-
-
Taniguchi, M.1
Sasaki, N.2
Tsuge, T.3
Aoyama, T.4
Oka, A.5
-
94
-
-
12144291195
-
MAPMAN: A user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes
-
Thimm O, Blasing O, Gibon Y, Nagel A, Meyer S, Krüger P, Selbig J, Müller LA, Rhee SY, Stitt M (2004) MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. Plant J 37: 914-939
-
(2004)
Plant J
, vol.37
, pp. 914-939
-
-
Thimm, O.1
Blasing, O.2
Gibon, Y.3
Nagel, A.4
Meyer, S.5
Krüger, P.6
Selbig, J.7
Müller, L.A.8
Rhee, S.Y.9
Stitt, M.10
-
95
-
-
1542647264
-
Type-A Arabidopsis response regulators are partially redundant negative regulators of cytokinin signaling
-
To JP, Haberer G, Ferreira FJ, Deruère J, Mason MG, Schaller GE, Alonso JM, Ecker JR, Kieber JJ (2004) Type-A Arabidopsis response regulators are partially redundant negative regulators of cytokinin signaling. Plant Cell 16: 658-671
-
(2004)
Plant Cell
, vol.16
, pp. 658-671
-
-
To, J.P.1
Haberer, G.2
Ferreira, F.J.3
Deruère, J.4
Mason, M.G.5
Schaller, G.E.6
Alonso, J.M.7
Ecker, J.R.8
Kieber, J.J.9
-
96
-
-
84855659200
-
Arabidopsis lonely guy (LOG) multiple mutants reveal a central role of the LOG-dependent pathway in cytokinin activation
-
Tokunaga H, Kojima M, Kuroha T, Ishida T, Sugimoto K, Kiba T, Sakakibara H (2012) Arabidopsis lonely guy (LOG) multiple mutants reveal a central role of the LOG-dependent pathway in cytokinin activation. Plant J 69: 355-365
-
(2012)
Plant J
, vol.69
, pp. 355-365
-
-
Tokunaga, H.1
Kojima, M.2
Kuroha, T.3
Ishida, T.4
Sugimoto, K.5
Kiba, T.6
Sakakibara, H.7
-
97
-
-
0033197511
-
A transmembrane hybrid-type histidine kinase in Arabidopsis functions as an osmosensor
-
Urao T, Yakubov B, Satoh R, Yamaguchi-Shinozaki K, Seki M, Hirayama T, Shinozaki K (1999) A transmembrane hybrid-type histidine kinase in Arabidopsis functions as an osmosensor. Plant Cell 11: 1743-1754
-
(1999)
Plant Cell
, vol.11
, pp. 1743-1754
-
-
Urao, T.1
Yakubov, B.2
Satoh, R.3
Yamaguchi-Shinozaki, K.4
Seki, M.5
Hirayama, T.6
Shinozaki, K.7
-
98
-
-
84869878968
-
Hormonal interactions in the regulation of plant development
-
Vanstraelen M, Benkovâ E (2012) Hormonal interactions in the regulation of plant development. Annu Rev Cell Dev Biol 28: 463-487
-
(2012)
Annu Rev Cell Dev Biol
, vol.28
, pp. 463-487
-
-
Vanstraelen, M.1
Benkovâ, E.2
-
99
-
-
62549128139
-
A census of human transcription factors: Function, expression and evolution
-
Vaquerizas JM, Kummerfeld SK, Teichmann SA, Luscombe NM (2009) A census of human transcription factors: function, expression and evolution. Nat Rev Genet 10: 252-263
-
(2009)
Nat Rev Genet
, vol.10
, pp. 252-263
-
-
Vaquerizas, J.M.1
Kummerfeld, S.K.2
Teichmann, S.A.3
Luscombe, N.M.4
-
100
-
-
83255165495
-
N-Glucosyl- transferase UGT76C2 is involved in cytokinin homeostasis and cytoki- nin response in Arabidopsis thaliana
-
Wang J, Ma XM, Kojima M, Sakakibara H, Hou BK (2011) N-Glucosyl- transferase UGT76C2 is involved in cytokinin homeostasis and cytoki- nin response in Arabidopsis thaliana. Plant Cell Physiol 52: 2200-2213
-
(2011)
Plant Cell Physiol
, vol.52
, pp. 2200-2213
-
-
Wang, J.1
Ma, X.M.2
Kojima, M.3
Sakakibara, H.4
Hou, B.K.5
-
101
-
-
80054079881
-
Cytokinin antagonizes ABA suppression to seed germination of Arabidopsis by downregulating ABI5 expression
-
Wang Y, Li L, Ye T, Zhao S, Liu Z, Feng YQ, Wu Y (2011) Cytokinin antagonizes ABA suppression to seed germination of Arabidopsis by downregulating ABI5 expression. Plant J 68: 249-261
-
(2011)
Plant J
, vol.68
, pp. 249-261
-
-
Wang, Y.1
Li, L.2
Ye, T.3
Zhao, S.4
Liu, Z.5
Feng, Y.Q.6
Wu, Y.7
-
102
-
-
65249163613
-
Conserved functions of Arabidopsis and rice CC-type glutaredoxins in flower development and pathogen response
-
Wang Z, Xing S, Birkenbihl RP, Zachgo S (2009) Conserved functions of Arabidopsis and rice CC-type glutaredoxins in flower development and pathogen response. Mol Plant 2: 323-335
-
(2009)
Mol Plant
, vol.2
, pp. 323-335
-
-
Wang, Z.1
Xing, S.2
Birkenbihl, R.P.3
Zachgo, S.4
-
103
-
-
79960940969
-
Regulation of stomatal opening by the guard cell expansin AtEXPA1
-
Wei PC, Zhang XQ, Zhao P, Wang XC (2011) Regulation of stomatal opening by the guard cell expansin AtEXPA1. Plant Signal Behav 6: 740-742
-
(2011)
Plant Signal Behav
, vol.6
, pp. 740-742
-
-
Wei, P.C.1
Zhang, X.Q.2
Zhao, P.3
Wang, X.C.4
-
104
-
-
70349558153
-
Regulation of plant growth by cytokinin. Proc Natl Acad Sci USA 98: 10487-10492 Werner T, Schmülling T (2009) Cytokinin action in plant development
-
Werner T, Motyka V, Strnad M, Schmülling T (2001) Regulation of plant growth by cytokinin. Proc Natl Acad Sci USA 98: 10487-10492 Werner T, Schmülling T (2009) Cytokinin action in plant development. Curr Opin Plant Biol 12: 527-538
-
(2001)
Curr Opin Plant Biol
, vol.12
, pp. 527-538
-
-
Werner, T.1
Motyka, V.2
Strnad, M.3
Schmülling, T.4
-
105
-
-
70349466371
-
The TRANSPORT INHIBITOR RESPONSE2 gene is required for auxin synthesis and diverse aspects of plant development
-
Yamada M, Greenham K, Prigge MJ, Jensen PJ, Estelle M (2009) The TRANSPORT INHIBITOR RESPONSE2 gene is required for auxin synthesis and diverse aspects of plant development. Plant Physiol 151: 168-177
-
(2009)
Plant Physiol
, vol.151
, pp. 168-177
-
-
Yamada, M.1
Greenham, K.2
Prigge, M.J.3
Jensen, P.J.4
Estelle, M.5
-
106
-
-
84870617760
-
MYBL2 is a substrate of GSK3-like kinase BIN2 and acts as a corepressor of BES1 in brassinosteroid signaling pathway in Arabidopsis
-
Ye H, Li L, Guo H, Yin Y (2012) MYBL2 is a substrate of GSK3-like kinase BIN2 and acts as a corepressor of BES1 in brassinosteroid signaling pathway in Arabidopsis. Proc Natl Acad Sci USA 109: 20142-20147
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 20142-20147
-
-
Ye, H.1
Li, L.2
Guo, H.3
Yin, Y.4
-
107
-
-
33846595211
-
Type-B ARR transcription factors, ARR10 and ARR12, are implicated in cytokinin-mediated regulation of protoxylem differentiation in roots of Arabidopsis thaliana
-
Yokoyama A, Yamashino T, Amano Y, Tajima Y, Imamura A, Sakakibara H, Mizuno T (2007) Type-B ARR transcription factors, ARR10 and ARR12, are implicated in cytokinin-mediated regulation of protoxylem differentiation in roots of Arabidopsis thaliana. Plant Cell Physiol 48: 84-96
-
(2007)
Plant Cell Physiol
, vol.48
, pp. 84-96
-
-
Yokoyama, A.1
Yamashino, T.2
Amano, Y.3
Tajima, Y.4
Imamura, A.5
Sakakibara, H.6
Mizuno, T.7
-
108
-
-
27944446929
-
AtbHLH29 of Arabidopsis thaliana is a functional ortholog of tomato FER involved in controlling iron acquisition in strategy I plants
-
Yuan YX, Zhang J, Wang DW, Ling HQ (2005) AtbHLH29 of Arabidopsis thaliana is a functional ortholog of tomato FER involved in controlling iron acquisition in strategy I plants. Cell Res 15: 613-621
-
(2005)
Cell Res
, vol.15
, pp. 613-621
-
-
Yuan, Y.X.1
Zhang, J.2
Wang, D.W.3
Ling, H.Q.4
-
109
-
-
77950866579
-
A single-repeat R3-MYB transcription factor MYBC1 negatively regulates freezing tolerance in Arabidopsis
-
Zhai H, Bai X, Zhu Y, Li Y, Cai H, Ji W, Ji Z, Liu X, Liu X, Li J (2010) A single-repeat R3-MYB transcription factor MYBC1 negatively regulates freezing tolerance in Arabidopsis. Biochem Biophys Res Commun 394: 1018-1023
-
(2010)
Biochem Biophys Res Commun
, vol.394
, pp. 1018-1023
-
-
Zhai, H.1
Bai, X.2
Zhu, Y.3
Li, Y.4
Cai, H.5
Ji, W.6
Ji, Z.7
Liu, X.8
Liu, X.9
Li, J.10
-
110
-
-
78650796897
-
Overexpression of the Arabidopsis a-expansin gene AtEXPA1 accelerates stomatal opening by decreasing the volumetric elastic modulus
-
Zhang XQ, Wei PC, Xiong YM, Yang Y, Chen J, Wang XC (2011) Overexpression of the Arabidopsis a-expansin gene AtEXPA1 accelerates stomatal opening by decreasing the volumetric elastic modulus. Plant Cell Rep 30: 27-36
-
(2011)
Plant Cell Rep
, vol.30
, pp. 27-36
-
-
Zhang, X.Q.1
Wei, P.C.2
Xiong, Y.M.3
Yang, Y.4
Chen, J.5
Wang, X.C.6
-
111
-
-
77955052647
-
Sucrose-induced hypocotyl elongation of Arabidopsis seedlings in darkness depends on the presence of gibberellins
-
Zhang Y, Liu Z, Wang L, Zheng S, Xie J, Bi Y (2010) Sucrose-induced hypocotyl elongation of Arabidopsis seedlings in darkness depends on the presence of gibberellins. J Plant Physiol 167: 1130-1136
-
(2010)
J Plant Physiol
, vol.167
, pp. 1130-1136
-
-
Zhang, Y.1
Liu, Z.2
Wang, L.3
Zheng, S.4
Xie, J.5
Bi, Y.6
-
112
-
-
10344251542
-
Identification of the cis-acting elements in Arabidopsis thaliana NHL10 promoter responsible for leaf senescence, the hypersensitive response against Cucumber mosaic virus infection, and spermine treatment
-
Zheng MS, Takahashi H, Miyazaki A, Yamaguchi K, Kusano T (2005) Identification of the cis-acting elements in Arabidopsis thaliana NHL10 promoter responsible for leaf senescence, the hypersensitive response against Cucumber mosaic virus infection, and spermine treatment. Plant Sci 168: 415-422
-
(2005)
Plant Sci
, vol.168
, pp. 415-422
-
-
Zheng, M.S.1
Takahashi, H.2
Miyazaki, A.3
Yamaguchi, K.4
Kusano, T.5
-
113
-
-
84863081356
-
ZFP5 encodes a functionally equivalent GIS protein to control trichome initiation
-
Zhou Z, An L, Sun L, Gan Y (2012) ZFP5 encodes a functionally equivalent GIS protein to control trichome initiation. Plant Signal Behav 7: 28-30
-
(2012)
Plant Signal Behav
, vol.7
, pp. 28-30
-
-
Zhou, Z.1
An, L.2
Sun, L.3
Gan, Y.4
-
114
-
-
80053618508
-
Zinc finger protein5 is required for the control of trichome initiation by acting upstream of zinc finger protein8 in Arabidopsis
-
Zhou Z, An L, Sun L, Zhu S, Xi W, Broun P, Yu H, Gan Y (2011) Zinc finger protein5 is required for the control of trichome initiation by acting upstream of zinc finger protein8 in Arabidopsis. Plant Physiol 157: 673-682
-
(2011)
Plant Physiol
, vol.157
, pp. 673-682
-
-
Zhou, Z.1
An, L.2
Sun, L.3
Zhu, S.4
Xi, W.5
Broun, P.6
Yu, H.7
Gan, Y.8
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