Reference Gene Selection for Real-Time Quantitative PCR Analysis of the Mouse Uterus in the Peri-Implantation Period

PLoS ONE

Volumn 8, Issue 4, 2013, Pages

  Lin, PengFei ^a   Lan, XiangLi ^a   Chen, FengLei ^a   Yang, YanZhou ^a   Jin, YaPing ^a   Wang, AiHua ^a  

^a NORTHWEST A F UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA;

18S GENE; ACTB GENE; ANIMAL TISSUE; ARTICLE; B2M GENE; COMPUTER PROGRAM; CONTROLLED STUDY; DECIDUALIZATION; DELAYED IMPLANTATION; FEMALE; FIRST TRIMESTER PREGNANCY; GAPDH GENE; GENE; GENE EXPRESSION REGULATION; GENETIC SELECTION; GENETIC STABILITY; HORMONAL THERAPY; HPRT1 GENE; MOUSE; NIDATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PPIA GENE; PSEUDOPREGNANCY; QUANTITATIVE ANALYSIS; REAL TIME POLYMERASE CHAIN REACTION; RPLPO GENE; TBO GENE; TBP GENE; TUBA GENE; UBC GENE; UTERUS;

ANIMALS; COMPUTATIONAL BIOLOGY; EMBRYO IMPLANTATION; FEMALE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; MALE; MICE; PREGNANCY; UTERUS;

EID: 84876592418     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0062462     Document Type: Article

References (25)

1. Bazer FW, Spencer TE, Johnson GA, Burghardt RC, (2011) Uterine receptivity to implantation of blastocysts in mammals. Front Biosci (Schol Ed) 3: 745-767.
2. Ramathal CY, Bagchi IC, Taylor RN, Bagchi MK, (2010) Endometrial decidualization: of mice and men. Semin Reprod Med 2: 817-26.
3. Paulson RJ, (2011) Hormonal induction of endometrial receptivity. Fertil Steril 96: 530-535.
4. Koot YE, Teklenburg G, Salker MS, Brosens JJ, Macklon NS, (2012) Molecular aspects of implantation failure. Biochim Biophys Acta 1822: 1943-1950.
5. Bustin SA, (2010) Why the need for qPCR publication guidelines?- The case for MIQE. Methods 50: 217-226.
6. Mamo S, Gal AB, Bodo S, Dinnyes A, (2007) Quantitative evaluation and selection of reference genes in mouse oocytes and embryos cultured in vivo and in vitro. BMC Dev Biol 7: 14.
7. Smits K, Goossens K, Van-Soom A, Govaere J, Hoogewijs M, et al. (2009) Selection of reference genes for quantitative real-time PCR in equine in vivo and fresh and frozen-thawed in vitro blastocysts. BMC Res Notes 2: 246.
8. Kouadjo KE, Nishida Y, Cadrin-Girard JF, Yoshioka M, St-Amand J, (2007) Housekeeping and tissue- specific genes in mouse tissues. BMC Genomics 8: 127.
9. Derveaux S, Vandesompele J, Hellemans J, (2010) How to do successful gene expression analysis using real-time PCR. Methods 50: 227-230.
10. Taylor S, Wakem M, Dijkman G, Alsarraj M, Nguyen M, (2010) A practical approach to RT-qPCR- Publishing data that conform to the MIQE guidelines. Methods 50: S1-S5.
11. Vandesompele J, De-Preter K, Pattyn F, Poppe B, Van-Roy N, et al. (2002) Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 3: RESEARCH0034.
12. Andersen CL, Jensen JL, Ørntoft TF, (2004) Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res 64: 5245-5250.
13. Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP, (2004) Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper-Excel-based tool using pair-wise correlations. Biotechnol Lett 26: 509-515.
14. Wang SLJ, Zhang A, Liu M, Zhang H, (2011) Selection of reference genes for studies of porcine endometrial gene expression on gestational day 12. Biochem Biophys Res Commun 408: 265-268.
15. Sadek KH, Cagampang FR, Bruce KD, Shreeve N, Macklon N, et al. (2012) Variation in stability of housekeeping genes in endometrium of healthy and polycystic ovarian syndrome women. Hum Reprod 27: 251-256.
16. Kayis SA, Atli MO, Kurar E, Bozkaya F, Semacan A, et al. (2011) Rating of putative housekeeping genes for quantitative gene expression analysis in cyclic and early pregnant equine endometrium. Anim Reprod Sci 125: 124-132.
17. Walker CG, Meier S, Mitchell MD, Roche JR, Littlejohn M, (2009) Evaluation of real-time PCR endogenous control genes for analysis of gene expression in bovine endometrium. BMC Mol Biol 10: 100.
18. Sun Z, Su R, Yang Z, Shi H, Liu C, et al. (2009) Expression of the novel gene embryo implantation factor 2 (EMO2) in the mouse uterus at theimplantation sites. Fertil Steril 91: 2116-2122.
19. Lee KY, Jeong JW, Tsai SY, Lydon JP, DeMayo FJ, (2007) Mouse models of implantation. Trends Endocrinol Metab 18: 234-239.
20. Marten M, Stefanie S, Stefan L, (2010) Selection of reliable reference genes during THP-1 monocyte differentiation into macrophages. BMC Mol Biol 11: 90.
21. Svingen T, Spiller CM, Kashimada K, Harley VR, Koopman P, (2009) Identification of suitable normalizing genes for quantitative real-time RT-PCR analysis of gene expression in fetal mouse gonads. Sex Dev 3: 194-204.
22. Boda E, Pini A, Hoxha E, Parolisi R, Tempia F, (2009) Selection of reference genes for quantitative real-time RT-PCR studies in mouse brain. J Mol Neurosci 37: 238-253.
23. Liu ZK, Wang RC, Han BC, Yang Y, Peng JP, (2012) A Novel Role of IGFBP7 in Mouse Uterus: Regulating Uterine Receptivity through Th1/Th2 Lymphocyte Balance and Decidualization. PLoS One 7: e45224.
24. Fu J, Bian L, Zhao L, Dong Z, Gao X, et al. (2010) Identification of genes for normalization of quantitative real-time PCR data in ovarian tissues. Acta Biochim Biophys Sin (Shanghai) 42: 568-574.
25. Sellayah D, Sek K, Anthony FW, Hanson MA, Cagampang FR, (2008) Sensitivity of housekeeping genes in the hypothalamus to mismatch in diets between pre- and postnatal periods in mice. Neurosci Lett 447: 54-57.