메뉴 건너뛰기




Volumn 10, Issue , 2009, Pages 100-

Evaluation of real-time PCR endogenous control genes for analysis of gene expression in bovine endometrium

Author keywords

[No Author keywords available]

Indexed keywords

ACTIN RELATED PROTEIN; ACTIN RELATED PROTEIN 1 HOMOLOG A; BARDET BIEDL SYNDROME 2 PROTEIN; BINDING PROTEIN; CHEMOKINE RECEPTOR CCR4 NOT TRANSCRIPTION COMPLEX 7; CYCLOPHILIN A; GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; HEAT SHOCK PROTEIN 40; HISTONE DEACETYLASE 1; OXYTOCIN RECEPTOR; PROTEIN DNAJ; PROTEIN DNAJ HOMOLOG SUBFAMILY C MEMBER 17; PROTEIN S 9; RAN BINDING PROTEIN 10; RIBOSOMAL PROTEIN S15A; RIBOSOME PROTEIN; SOLUTE CARRIER FAMILY 30; SUPPRESSOR OF ZESTE 12 HOMOLOG; UBIQUITOUSLY EXPRESSED TRANSCRIPT; UNCLASSIFIED DRUG; ZINC FINGER PROTEIN; ZINC FINGER PROTEIN 131; ZINC TRANSPORTER;

EID: 70549101074     PISSN: None     EISSN: 14712199     Source Type: Journal    
DOI: 10.1186/1471-2199-10-100     Document Type: Article
Times cited : (74)

References (32)
  • 1
    • 33646854724 scopus 로고    scopus 로고
    • Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR
    • Jain M, Nijhawan A, Tyagi AK, Khurana JP. Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR. Biochemical and Biophysical Research Communications 2006, 345:646-651.
    • (2006) Biochemical and Biophysical Research Communications , vol.345 , pp. 646-651
    • Jain, M.1    Nijhawan, A.2    Tyagi, A.K.3    Khurana, J.P.4
  • 3
    • 33645808222 scopus 로고    scopus 로고
    • Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays
    • 1435885, 16551369, 10.1186/1471-2164-7-59
    • Wang Y, Barbacioru C, Hyland F, Xiao W, Hunkapiller K, Blake J, Chan F, Gonzalez C, Zhang L, Samaha R. Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays. BMC Genomics 2006, 7:59. 1435885, 16551369, 10.1186/1471-2164-7-59.
    • (2006) BMC Genomics , vol.7 , pp. 59
    • Wang, Y.1    Barbacioru, C.2    Hyland, F.3    Xiao, W.4    Hunkapiller, K.5    Blake, J.6    Chan, F.7    Gonzalez, C.8    Zhang, L.9    Samaha, R.10
  • 4
    • 33847643776 scopus 로고    scopus 로고
    • Quantification of mRNA using real-time RT-PCR
    • 10.1038/nprot.2006.236, 17406449
    • Nolan T, Hands RE, Bustin SA. Quantification of mRNA using real-time RT-PCR. Nature Protocols 2006, 1:1559-1582. 10.1038/nprot.2006.236, 17406449.
    • (2006) Nature Protocols , vol.1 , pp. 1559-1582
    • Nolan, T.1    Hands, R.E.2    Bustin, S.A.3
  • 5
    • 33845624887 scopus 로고    scopus 로고
    • Microarray validation: factors influencing correlation between oligonucleotide microarrays and real-time PCR
    • 1779618, 17242735, 10.1251/bpo126
    • Morey JS, Ryan JC, Van Dolah FM. Microarray validation: factors influencing correlation between oligonucleotide microarrays and real-time PCR. Biological Procedures Online 2006, 8:175-193. 1779618, 17242735, 10.1251/bpo126.
    • (2006) Biological Procedures Online , vol.8 , pp. 175-193
    • Morey, J.S.1    Ryan, J.C.2    Van Dolah, F.M.3
  • 6
    • 21344458602 scopus 로고    scopus 로고
    • Quantitative real-time RT-PCR - a perspective
    • 10.1677/jme.1.01755, 15956331
    • Bustin SA, Benes V, Nolan T, Pfaffl MW. Quantitative real-time RT-PCR - a perspective. J Mol Endocrinol 2005, 34:597-601. 10.1677/jme.1.01755, 15956331.
    • (2005) J Mol Endocrinol , vol.34 , pp. 597-601
    • Bustin, S.A.1    Benes, V.2    Nolan, T.3    Pfaffl, M.W.4
  • 7
    • 0036668567 scopus 로고    scopus 로고
    • Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems
    • 10.1677/jme.0.0290023, 12200227
    • Bustin SA. Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems. Journal of Molecular Endocrinology 2002, 29:23-39. 10.1677/jme.0.0290023, 12200227.
    • (2002) Journal of Molecular Endocrinology , vol.29 , pp. 23-39
    • Bustin, S.A.1
  • 8
    • 3142615272 scopus 로고    scopus 로고
    • Validation of housekeeping genes for normalizing RNA expression in real-time PCR
    • 116, 118-119
    • Dheda K, Huggett JF, Bustin SA, Johnson MA, Rook G, Zumla A. Validation of housekeeping genes for normalizing RNA expression in real-time PCR. BioTechniques 2004, 37:112-114. 116, 118-119.
    • (2004) BioTechniques , vol.37 , pp. 112-114
    • Dheda, K.1    Huggett, J.F.2    Bustin, S.A.3    Johnson, M.A.4    Rook, G.5    Zumla, A.6
  • 11
    • 34248664977 scopus 로고    scopus 로고
    • Global gene expression analysis and regulation of the principal genes expressed in bovine placenta in relation to the transcription factor AP-2 family
    • Ushizawa K, Takahashi T, Hosoe M, Ishiwata H, Kaneyama K, Kizaki K, Hashizume K. Global gene expression analysis and regulation of the principal genes expressed in bovine placenta in relation to the transcription factor AP-2 family. Reproductive Biology and Endocrinology 2007, 5:17.
    • (2007) Reproductive Biology and Endocrinology , vol.5 , pp. 17
    • Ushizawa, K.1    Takahashi, T.2    Hosoe, M.3    Ishiwata, H.4    Kaneyama, K.5    Kizaki, K.6    Hashizume, K.7
  • 13
    • 28344455318 scopus 로고    scopus 로고
    • Evaluation of potential reference genes in real-time RT-PCR studies of Atlantic salmon
    • 1314898, 16293192, 10.1186/1471-2199-6-21
    • Olsvik P, Lie K, Jordal A-E, Nilsen T, Hordvik I. Evaluation of potential reference genes in real-time RT-PCR studies of Atlantic salmon. BMC Molecular Biology 2005, 6:21. 1314898, 16293192, 10.1186/1471-2199-6-21.
    • (2005) BMC Molecular Biology , vol.6 , pp. 21
    • Olsvik, P.1    Lie, K.2    Jordal, A.-.E.3    Nilsen, T.4    Hordvik, I.5
  • 14
    • 21344471138 scopus 로고    scopus 로고
    • Real-time RT-PCR normalisation; strategies and considerations
    • 10.1038/sj.gene.6364190, 15815687
    • Huggett J, Dheda K, Bustin S, Zumla A. Real-time RT-PCR normalisation; strategies and considerations. Genes Immun 2005, 6:279-284. 10.1038/sj.gene.6364190, 15815687.
    • (2005) Genes Immun , vol.6 , pp. 279-284
    • Huggett, J.1    Dheda, K.2    Bustin, S.3    Zumla, A.4
  • 15
    • 46749092074 scopus 로고    scopus 로고
    • Integration of Physiological Mechanisms That Influence Fertility in Dairy Cows
    • Garnsworthy PC, Sinclair KD, Webb R. Integration of Physiological Mechanisms That Influence Fertility in Dairy Cows. animal 2008, 2:1144-1152.
    • (2008) animal , vol.2 , pp. 1144-1152
    • Garnsworthy, P.C.1    Sinclair, K.D.2    Webb, R.3
  • 16
    • 33750070047 scopus 로고    scopus 로고
    • Embryo survival in dairy cows managed under pastoral conditions
    • 10.1016/j.anireprosci.2006.08.008, 16963203
    • Diskin MG, Murphy JJ, Sreenan JM. Embryo survival in dairy cows managed under pastoral conditions. Animal Reproduction Science 2006, 96:297-311. 10.1016/j.anireprosci.2006.08.008, 16963203.
    • (2006) Animal Reproduction Science , vol.96 , pp. 297-311
    • Diskin, M.G.1    Murphy, J.J.2    Sreenan, J.M.3
  • 18
    • 34047221647 scopus 로고    scopus 로고
    • Gene expression profiles of novel caprine placental prolactin-related proteins similar to bovine placental prolactin-related proteins
    • 1847437, 17359547, 10.1186/1471-213X-7-16
    • Ushizawa K, Takahashi T, Hosoe M, Kizaki K, Abe Y, Sasada H, Sato E, Hashizume K. Gene expression profiles of novel caprine placental prolactin-related proteins similar to bovine placental prolactin-related proteins. BMC Developmental Biology 2007, 7:16. 1847437, 17359547, 10.1186/1471-213X-7-16.
    • (2007) BMC Developmental Biology , vol.7 , pp. 16
    • Ushizawa, K.1    Takahashi, T.2    Hosoe, M.3    Kizaki, K.4    Abe, Y.5    Sasada, H.6    Sato, E.7    Hashizume, K.8
  • 19
    • 34347230863 scopus 로고    scopus 로고
    • Identification of reference genes for quantitative real-time PCR in the bovine mammary gland during the lactation cycle
    • 10.1152/physiolgenomics.00223.2006, 17284669
    • Bionaz M, Loor JJ. Identification of reference genes for quantitative real-time PCR in the bovine mammary gland during the lactation cycle. Physiol Genomics 2007, 29:312-319. 10.1152/physiolgenomics.00223.2006, 17284669.
    • (2007) Physiol Genomics , vol.29 , pp. 312-319
    • Bionaz, M.1    Loor, J.J.2
  • 20
    • 3442876969 scopus 로고    scopus 로고
    • Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
    • 10.1158/0008-5472.CAN-04-0496, 15289330
    • Andersen CL, Jensen JL, Ørntoft TF. Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Research 2004, 64:5245-5250. 10.1158/0008-5472.CAN-04-0496, 15289330.
    • (2004) Cancer Research , vol.64 , pp. 5245-5250
    • Andersen, C.L.1    Jensen, J.L.2    Ørntoft, T.F.3
  • 21
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • research0034.0031-research0034.0011-research0034.0031-research0034.0011, 126239, 12184808
    • Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, Speleman F. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biology 2002, 3. research0034.0031-research0034.0011-research0034.0031-research0034.0011, 126239, 12184808.
    • (2002) Genome Biology , vol.3
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5    De Paepe, A.6    Speleman, F.7
  • 22
    • 0021417312 scopus 로고
    • Development of the caruncular and intercaruncular regions in the bovine endometrium
    • 10.1095/biolreprod30.3.763, 6722243
    • Atkinson BA, King GJ, Amoroso EC. Development of the caruncular and intercaruncular regions in the bovine endometrium. Biol Reprod 1984, 30:763-774. 10.1095/biolreprod30.3.763, 6722243.
    • (1984) Biol Reprod , vol.30 , pp. 763-774
    • Atkinson, B.A.1    King, G.J.2    Amoroso, E.C.3
  • 23
    • 0036903639 scopus 로고    scopus 로고
    • Quantitative unbiased estimates of endometrial gland surface area and volume in cycling cows and heifers
    • 10.1016/S0034-5288(02)00098-X, 12443683
    • Dhaliwal GS, Murray RD, Rees EM, Howard CV, Beech DJ. Quantitative unbiased estimates of endometrial gland surface area and volume in cycling cows and heifers. Research in Veterinary Science 2002, 73:259-265. 10.1016/S0034-5288(02)00098-X, 12443683.
    • (2002) Research in Veterinary Science , vol.73 , pp. 259-265
    • Dhaliwal, G.S.1    Murray, R.D.2    Rees, E.M.3    Howard, C.V.4    Beech, D.J.5
  • 24
    • 0031927334 scopus 로고    scopus 로고
    • In Vitro Response to Oxytocin and Interferon-Tau in Bovine Endometrial Cells from Caruncular and Inter-Caruncular Areas
    • 10.1095/biolreprod59.2.241, 9687291
    • Asselin E, Drolet P, Fortier MA. In Vitro Response to Oxytocin and Interferon-Tau in Bovine Endometrial Cells from Caruncular and Inter-Caruncular Areas. Biol Reprod 1998, 59:241-247. 10.1095/biolreprod59.2.241, 9687291.
    • (1998) Biol Reprod , vol.59 , pp. 241-247
    • Asselin, E.1    Drolet, P.2    Fortier, M.A.3
  • 26
    • 39449109180 scopus 로고    scopus 로고
    • Dynamic changes in messenger RNA profiles of bovine endometrium during the oestrous cycle
    • 10.1530/REP-07-0415, 18239051
    • Mitko K, Ulbrich SE, Wenigerkind H, Sinowatz F, Blum H, Wolf E, Bauersachs S. Dynamic changes in messenger RNA profiles of bovine endometrium during the oestrous cycle. Reproduction 2008, 135:225-240. 10.1530/REP-07-0415, 18239051.
    • (2008) Reproduction , vol.135 , pp. 225-240
    • Mitko, K.1    Ulbrich, S.E.2    Wenigerkind, H.3    Sinowatz, F.4    Blum, H.5    Wolf, E.6    Bauersachs, S.7
  • 27
    • 15044341806 scopus 로고    scopus 로고
    • Effects of Bovine Somatotropin on Uterine Genes Related to the Prostaglandin Cascade in Lactating Dairy Cows
    • Balaguer SA, Pershing RA, Rodriguez-Sallaberry C, Thatcher WW, Badinga L. Effects of Bovine Somatotropin on Uterine Genes Related to the Prostaglandin Cascade in Lactating Dairy Cows. J Dairy Sci 2005, 88:543-552.
    • (2005) J Dairy Sci , vol.88 , pp. 543-552
    • Balaguer, S.A.1    Pershing, R.A.2    Rodriguez-Sallaberry, C.3    Thatcher, W.W.4    Badinga, L.5
  • 28
    • 0035069755 scopus 로고    scopus 로고
    • The Oxytocin Receptor System: Structure, Function, and Regulation
    • Gimpl G, Fahrenholz F. The Oxytocin Receptor System: Structure, Function, and Regulation. Physiol Rev 2001, 81:629-683.
    • (2001) Physiol Rev , vol.81 , pp. 629-683
    • Gimpl, G.1    Fahrenholz, F.2
  • 29
    • 39449084092 scopus 로고    scopus 로고
    • Genes involved in conceptus-endometrial interactions in ruminants: insights from reductionism and thoughts on holistic approaches
    • 10.1530/REP-07-0327, 18239047
    • Spencer TE, Sandra O, Wolf E. Genes involved in conceptus-endometrial interactions in ruminants: insights from reductionism and thoughts on holistic approaches. Reproduction 2008, 135:165-179. 10.1530/REP-07-0327, 18239047.
    • (2008) Reproduction , vol.135 , pp. 165-179
    • Spencer, T.E.1    Sandra, O.2    Wolf, E.3
  • 30
    • 33747634069 scopus 로고    scopus 로고
    • Embryo-induced transcriptome changes in bovine endometrium reveal species-specific and common molecular markers of uterine receptivity
    • 10.1530/rep.1.00996, 16885540
    • Bauersachs S, Ulbrich SE, Gross K, Schmidt SEM, Meyer HHD, Wenigerkind H, Vermehren M, Sinowatz F, Blum H, Wolf E. Embryo-induced transcriptome changes in bovine endometrium reveal species-specific and common molecular markers of uterine receptivity. Reproduction 2006, 132:319-331. 10.1530/rep.1.00996, 16885540.
    • (2006) Reproduction , vol.132 , pp. 319-331
    • Bauersachs, S.1    Ulbrich, S.E.2    Gross, K.3    Schmidt, S.E.M.4    Meyer, H.H.D.5    Wenigerkind, H.6    Vermehren, M.7    Sinowatz, F.8    Blum, H.9    Wolf, E.10
  • 31
    • 11444250124 scopus 로고    scopus 로고
    • The effect of strain of Holstein-Friesian cow and feeding system on postpartum ovarian function, animal production and conception rate to first service
    • 10.1016/j.theriogenology.2004.05.014, 15629811
    • Horan B, Mee JF, O'Connor P, Rath M, Dillon P. The effect of strain of Holstein-Friesian cow and feeding system on postpartum ovarian function, animal production and conception rate to first service. Theriogenology 2005, 63:950-971. 10.1016/j.theriogenology.2004.05.014, 15629811.
    • (2005) Theriogenology , vol.63 , pp. 950-971
    • Horan, B.1    Mee, J.F.2    O'Connor, P.3    Rath, M.4    Dillon, P.5
  • 32
    • 68949201514 scopus 로고    scopus 로고
    • Genetic strain and reproductive status affect endometrial fatty acid concentrations
    • 10.3168/jds.2009-2047, 19620654
    • Meier S, Peterson AJ, Mitchell MD, Littlejohn M, Walker CG, Roche JR. Genetic strain and reproductive status affect endometrial fatty acid concentrations. J Dairy Sci 2009, 92:3723-3730. 10.3168/jds.2009-2047, 19620654.
    • (2009) J Dairy Sci , vol.92 , pp. 3723-3730
    • Meier, S.1    Peterson, A.J.2    Mitchell, M.D.3    Littlejohn, M.4    Walker, C.G.5    Roche, J.R.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.