-
1
-
-
0345326550
-
Nocardiopsis dassonvillei recovered from a lung biopsy and a possible cause of extrinsic allergic alveolitis
-
Bernatchez H, Lebreux E, (1991) Nocardiopsis dassonvillei recovered from a lung biopsy and a possible cause of extrinsic allergic alveolitis. Clin Microbiol Newsl 6: 47-55.
-
(1991)
Clin Microbiol Newsl
, vol.6
, pp. 47-55
-
-
Bernatchez, H.1
Lebreux, E.2
-
2
-
-
0030853114
-
Description of Nocardiopsis synnemataformans sp. nov., elevation of Nocardiopsis alba subsp. prasina to Nocardiopsis prasina comb. nov., and designation of Nocardiopsis antarctica and Nocardiopsis alborubida as later subjective synonyms of Nocardiopsis dassonvillei
-
Yassin AF, Rainey FA, Burghardt J, Gierth D, Ungerechts J, et al. (1997) Description of Nocardiopsis synnemataformans sp. nov., elevation of Nocardiopsis alba subsp. prasina to Nocardiopsis prasina comb. nov., and designation of Nocardiopsis antarctica and Nocardiopsis alborubida as later subjective synonyms of Nocardiopsis dassonvillei. Int J Syst Bacteriol 47: 983-988.
-
(1997)
Int J Syst Bacteriol
, vol.47
, pp. 983-988
-
-
Yassin, A.F.1
Rainey, F.A.2
Burghardt, J.3
Gierth, D.4
Ungerechts, J.5
-
3
-
-
84864097195
-
Nasal vestibulitis due to Nocardiopsis dassonvillei in a diabetic patient
-
Shivaprakash MR, Sumangala B, Prasanna H, Yenigalla BM, Munegowda KC, et al. (2012) Nasal vestibulitis due to Nocardiopsis dassonvillei in a diabetic patient. J Med Microbiol 61: 1168-1173.
-
(2012)
J Med Microbiol
, vol.61
, pp. 1168-1173
-
-
Shivaprakash, M.R.1
Sumangala, B.2
Prasanna, H.3
Yenigalla, B.M.4
Munegowda, K.C.5
-
4
-
-
55849099328
-
The family Nocardiopsaceae
-
M Dworkin, S Falkow, E Rosenberg, KH Schleifer, E Stackebrandt, editors, New York: Springer
-
Kroppenstedt RM, Evtushenko LI (2002) The family Nocardiopsaceae. In: M Dworkin, S Falkow, E Rosenberg, KH Schleifer, E Stackebrandt, editors. The Prokaryotes: a Handbook on the Biology of Bacteria. New York: Springer. 754-795.
-
(2002)
The Prokaryotes: A Handbook on the Biology of Bacteria
, pp. 754-795
-
-
Kroppenstedt, R.M.1
Evtushenko, L.I.2
-
5
-
-
84863702920
-
Nocardiopsis coralliicola sp. nov., isolated from the gorgonian coral, Menella praelonga
-
Li J, Yang J, Zhu WY, He J, Tian XP, et al. (2012) Nocardiopsis coralliicola sp. nov., isolated from the gorgonian coral, Menella praelonga. Int J Syst Evol Microbiol 62: 1653-1658.
-
(2012)
Int J Syst Evol Microbiol
, vol.62
, pp. 1653-1658
-
-
Li, J.1
Yang, J.2
Zhu, W.Y.3
He, J.4
Tian, X.P.5
-
6
-
-
0026040788
-
Methylpendolmycin, an indolactam from a Nocardiopsis sp
-
Sun HH, White CB, Dedinas J, Cooper R, Sedlock DM, (1991) Methylpendolmycin, an indolactam from a Nocardiopsis sp. J Nat Prod 54: 1440-1443.
-
(1991)
J Nat Prod
, vol.54
, pp. 1440-1443
-
-
Sun, H.H.1
White, C.B.2
Dedinas, J.3
Cooper, R.4
Sedlock, D.M.5
-
7
-
-
0030827941
-
Apoptolidin, a new apoptosis inducer in transformed cells from Nocardiopsis sp
-
Kim JW, Adachi H, Shin-ya K, Hayakawa Y, Seto H, (1997) Apoptolidin, a new apoptosis inducer in transformed cells from Nocardiopsis sp. J Antibiot (Tokyo) 50: 628-630.
-
(1997)
J Antibiot (Tokyo)
, vol.50
, pp. 628-630
-
-
Kim, J.W.1
Adachi, H.2
Shin-ya, K.3
Hayakawa, Y.4
Seto, H.5
-
8
-
-
43049155189
-
Griseusin D, a new pyranonaphthoquinone derivative from a alkaphilic Nocardiopsis sp
-
Li YQ, Li MG, Li W, Zhao JY, Ding ZG, et al. (2007) Griseusin D, a new pyranonaphthoquinone derivative from a alkaphilic Nocardiopsis sp. J Antibiot (Tokyo) 60: 757-761.
-
(2007)
J Antibiot (Tokyo)
, vol.60
, pp. 757-761
-
-
Li, Y.Q.1
Li, M.G.2
Li, W.3
Zhao, J.Y.4
Ding, Z.G.5
-
9
-
-
69249222718
-
Production and characterization of lipopeptide biosurfactant by a sponge-associated marine actinomycetes Nocardiopsis alba MSA10
-
Gandhimathi R, Kiran SG, Hema TA, Selvin J, Raviji TR, et al. (2009) Production and characterization of lipopeptide biosurfactant by a sponge-associated marine actinomycetes Nocardiopsis alba MSA10. Bioprocess Biosyst Eng 32: 825-835.
-
(2009)
Bioprocess Biosyst Eng
, vol.32
, pp. 825-835
-
-
Gandhimathi, R.1
Kiran, S.G.2
Hema, T.A.3
Selvin, J.4
Raviji, T.R.5
-
10
-
-
77955573389
-
Production of a new thiopeptide antibiotic, TP-1161, by a marine Nocardiopsis species
-
Engelhardt K, Degnes KF, Kemmler M, Bredholt H, Fjaervik E, et al. (2010) Production of a new thiopeptide antibiotic, TP-1161, by a marine Nocardiopsis species. Appl Environ Microbiol 76: 4969-4976.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 4969-4976
-
-
Engelhardt, K.1
Degnes, K.F.2
Kemmler, M.3
Bredholt, H.4
Fjaervik, E.5
-
11
-
-
77950224880
-
Naphthospironone A: An unprecedented and highly functionalized polycyclic metabolite from an alkaline mine waste extremophile
-
Ding ZG, Li MG, Zhao JY, Ren J, Huang R, et al. (2010) Naphthospironone A: An unprecedented and highly functionalized polycyclic metabolite from an alkaline mine waste extremophile. Chem Eur J 16: 3902-3905.
-
(2010)
Chem Eur J
, vol.16
, pp. 3902-3905
-
-
Ding, Z.G.1
Li, M.G.2
Zhao, J.Y.3
Ren, J.4
Huang, R.5
-
12
-
-
0034283229
-
Intraspecies variation in bacterial genomes: the need for a species genome concept
-
Lan R, Reeves PR, (2000) Intraspecies variation in bacterial genomes: the need for a species genome concept. Trends Microbiol 8: 396-401.
-
(2000)
Trends Microbiol
, vol.8
, pp. 396-401
-
-
Lan, R.1
Reeves, P.R.2
-
13
-
-
27444438599
-
The microbial pan-genome
-
Medini D, Donati C, Tettelin H, Masignani V, Rappuoli R, (2005) The microbial pan-genome. Curr Opin Genet Dev 15: 589-594.
-
(2005)
Curr Opin Genet Dev
, vol.15
, pp. 589-594
-
-
Medini, D.1
Donati, C.2
Tettelin, H.3
Masignani, V.4
Rappuoli, R.5
-
14
-
-
34548246020
-
Temporal fragmentation of speciation in bacteria
-
Retchless AC, Lawrence JG, (2007) Temporal fragmentation of speciation in bacteria. Science 317: 1093-1096.
-
(2007)
Science
, vol.317
, pp. 1093-1096
-
-
Retchless, A.C.1
Lawrence, J.G.2
-
15
-
-
0036598066
-
Gene transfer in bacteria: Speciation without species?
-
Lawrence JG, (2002) Gene transfer in bacteria: Speciation without species? Theor Popul Biol 61: 449-460.
-
(2002)
Theor Popul Biol
, vol.61
, pp. 449-460
-
-
Lawrence, J.G.1
-
16
-
-
0030606233
-
Pathogenicity islands: Bacterial evolution in quantum leaps
-
Groisman EA, Ochman H, (1996) Pathogenicity islands: Bacterial evolution in quantum leaps. Cell 87: 791-794.
-
(1996)
Cell
, vol.87
, pp. 791-794
-
-
Groisman, E.A.1
Ochman, H.2
-
17
-
-
23944499633
-
Horizontal gene transfer, genome innovation and evolution
-
Gogarten JP, Townsend JP, (2005) Horizontal gene transfer, genome innovation and evolution. Nat Rev Microbiol 3: 679-687.
-
(2005)
Nat Rev Microbiol
, vol.3
, pp. 679-687
-
-
Gogarten, J.P.1
Townsend, J.P.2
-
18
-
-
34848903282
-
Intracellular pathogens go extreme: genome evolution in the Rickettsiales
-
Darby AC, Cho NH, Fuxelius HH, Westberg J, Andersson SG, (2007) Intracellular pathogens go extreme: genome evolution in the Rickettsiales. Trends Genet 23: 511-520.
-
(2007)
Trends Genet
, vol.23
, pp. 511-520
-
-
Darby, A.C.1
Cho, N.H.2
Fuxelius, H.H.3
Westberg, J.4
Andersson, S.G.5
-
19
-
-
33846515638
-
Reductive genome evolution from the mother of Rickettsia
-
Blanc G, Ogata H, Robert C, Audic S, Suhre K, et al. (2007) Reductive genome evolution from the mother of Rickettsia. PLoS Genet 3: e14.
-
(2007)
PLoS Genet
, vol.3
-
-
Blanc, G.1
Ogata, H.2
Robert, C.3
Audic, S.4
Suhre, K.5
-
20
-
-
66749136930
-
Massive comparative genomic analysis reveals convergent evolution of specialized bacteria
-
Merhej V, Royer-Carenzi M, Pontarotti P, Raoult D, (2009) Massive comparative genomic analysis reveals convergent evolution of specialized bacteria. Biol Direct 4: 13.
-
(2009)
Biol Direct
, vol.4
, pp. 13
-
-
Merhej, V.1
Royer-Carenzi, M.2
Pontarotti, P.3
Raoult, D.4
-
21
-
-
0035860458
-
Mechanisms of evolution in Rickettsia conorii and R. prowazekii
-
Ogata H, Audic S, Renesto-Audiffren P, Fournier PE, Barbe V, et al. (2001) Mechanisms of evolution in Rickettsia conorii and R. prowazekii. Science 293: 2093-2098.
-
(2001)
Science
, vol.293
, pp. 2093-2098
-
-
Ogata, H.1
Audic, S.2
Renesto-Audiffren, P.3
Fournier, P.E.4
Barbe, V.5
-
22
-
-
34548052416
-
Identification of rickettsial isolates at the species level using multi-spacer typing
-
Fournier PE, Raoult D, (2007) Identification of rickettsial isolates at the species level using multi-spacer typing. BMC Microbiol 7: 72.
-
(2007)
BMC Microbiol
, vol.7
, pp. 72
-
-
Fournier, P.E.1
Raoult, D.2
-
23
-
-
3042840997
-
Computational inference of scenarios for alpha-proteobacterial genome evolution
-
Boussau B, Karlberg EO, Frank AC, Legault BA, Andersson SG, (2004) Computational inference of scenarios for alpha-proteobacterial genome evolution. Proc Natl Acad Sci U S A 101: 9722-9727.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 9722-9727
-
-
Boussau, B.1
Karlberg, E.O.2
Frank, A.C.3
Legault, B.A.4
Andersson, S.G.5
-
24
-
-
72049088798
-
Genome wide evolutionary analyses reveal serotype specific patterns of positive selection in selected Salmonella serotypes
-
Soyer Y, Orsi RH, Rodriguez-Rivera LD, Sun Q, Wiedmann M, (2009) Genome wide evolutionary analyses reveal serotype specific patterns of positive selection in selected Salmonella serotypes. BMC Evol Biol 9: 264.
-
(2009)
BMC Evol Biol
, vol.9
, pp. 264
-
-
Soyer, Y.1
Orsi, R.H.2
Rodriguez-Rivera, L.D.3
Sun, Q.4
Wiedmann, M.5
-
25
-
-
59249089471
-
Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths
-
Touchon M, Hoede C, Tenaillon O, Barbe V, Baeriswyl S, et al. (2009) Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. PLoS Genet 5: e1000344.
-
(2009)
PLoS Genet
, vol.5
-
-
Touchon, M.1
Hoede, C.2
Tenaillon, O.3
Barbe, V.4
Baeriswyl, S.5
-
26
-
-
80052253949
-
Complete genome sequence of Nocardiopsis dassonvillei type strain (IMRU 509)
-
Sun H, Lapidus A, Nolan M, Lucas S, Del Rio TG, et al. (2010) Complete genome sequence of Nocardiopsis dassonvillei type strain (IMRU 509). Stand Genomic Sci 3: 325-336.
-
(2010)
Stand Genomic Sci
, vol.3
, pp. 325-336
-
-
Sun, H.1
Lapidus, A.2
Nolan, M.3
Lucas, S.4
Del Rio, T.G.5
-
27
-
-
84869145682
-
Whole-genome sequence of Nocardiopsis alba strain ATCC BAA-2165, associated with honeybees
-
Qiao J, Chen L, Li Y, Wang J, Zhang W, et al. (2012) Whole-genome sequence of Nocardiopsis alba strain ATCC BAA-2165, associated with honeybees. J Bacteriol 194: 6358-6359.
-
(2012)
J Bacteriol
, vol.194
, pp. 6358-6359
-
-
Qiao, J.1
Chen, L.2
Li, Y.3
Wang, J.4
Zhang, W.5
-
28
-
-
78049425463
-
Evidence of selection upon genomic GC-content in bacteria
-
Hildebrand F, Meyer A, Eyre-Walker A, (2010) Evidence of selection upon genomic GC-content in bacteria. PLoS Genet 6: e1001107.
-
(2010)
PLoS Genet
, vol.6
-
-
Hildebrand, F.1
Meyer, A.2
Eyre-Walker, A.3
-
29
-
-
84855498305
-
On the molecular mechanism of GC content variation among eubacterial genomes
-
Wu H, Zhang Z, Hu S, Yu J, (2012) On the molecular mechanism of GC content variation among eubacterial genomes. Biol Direct 7: 2.
-
(2012)
Biol Direct
, vol.7
, pp. 2
-
-
Wu, H.1
Zhang, Z.2
Hu, S.3
Yu, J.4
-
30
-
-
1042298811
-
Evolution of protein superfamilies and bacterial genome size
-
Ranea JA, Buchan DW, Thornton JM, Orengo CA, (2004) Evolution of protein superfamilies and bacterial genome size. J Mol Biol 336: 871-887.
-
(2004)
J Mol Biol
, vol.336
, pp. 871-887
-
-
Ranea, J.A.1
Buchan, D.W.2
Thornton, J.M.3
Orengo, C.A.4
-
31
-
-
79958280684
-
Massive genomic decay in Serratia symbiotica, a recently evolved symbiont of aphids
-
Burke GR, Moran NA, (2011) Massive genomic decay in Serratia symbiotica, a recently evolved symbiont of aphids. Genome Biol Evol 3: 195-208.
-
(2011)
Genome Biol Evol
, vol.3
, pp. 195-208
-
-
Burke, G.R.1
Moran, N.A.2
-
32
-
-
53849104729
-
The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates
-
Rasko DA, Rosovitz MJ, Myers GS, Mongodin EF, Fricke WF, et al. (2008) The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates. J Bacteriol 190: 6881-6893.
-
(2008)
J Bacteriol
, vol.190
, pp. 6881-6893
-
-
Rasko, D.A.1
Rosovitz, M.J.2
Myers, G.S.3
Mongodin, E.F.4
Fricke, W.F.5
-
33
-
-
33645827531
-
Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach
-
Chen SL, Hung CS, Xu J, Reigstad CS, Magrini V, et al. (2006) Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach. Proc Natl Acad Sci U S A 103: 5977-5982.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 5977-5982
-
-
Chen, S.L.1
Hung, C.S.2
Xu, J.3
Reigstad, C.S.4
Magrini, V.5
-
34
-
-
25444524604
-
Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome"
-
Tettelin H, Masignani V, Cieslewicz MJ, Donati C, Medini D, et al. (2005) Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome". Proc Natl Acad Sci U S A 102: 13950-13955.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 13950-13955
-
-
Tettelin, H.1
Masignani, V.2
Cieslewicz, M.J.3
Donati, C.4
Medini, D.5
-
35
-
-
20544432535
-
The TetR family of transcriptional repressors
-
Ramos JL, Martínez-Bueno M, Molina-Henares AJ, Terán W, Watanabe K, et al. (2005) The TetR family of transcriptional repressors. Microbiol Mol Biol Rev 69: 326-356.
-
(2005)
Microbiol Mol Biol Rev
, vol.69
, pp. 326-356
-
-
Ramos, J.L.1
Martínez-Bueno, M.2
Molina-Henares, A.J.3
Terán, W.4
Watanabe, K.5
-
36
-
-
60149085847
-
A phylogenomic analysis of bacterial helix-turn-helix transcription factors
-
Santos CL, Tavares F, Thioulouse J, Normand P, (2009) A phylogenomic analysis of bacterial helix-turn-helix transcription factors. FEMS Microbiol Rev 33: 411-429.
-
(2009)
FEMS Microbiol Rev
, vol.33
, pp. 411-429
-
-
Santos, C.L.1
Tavares, F.2
Thioulouse, J.3
Normand, P.4
-
37
-
-
84864387135
-
Structure of an MmyB-like regulator from C. aurantiacus, member of a new transcription factor family linked to antibiotic metabolism in actinomycetes
-
Xu Q, van Wezel GP, Chiu HJ, Jaroszewski L, Klock HE, et al. (2012) Structure of an MmyB-like regulator from C. aurantiacus, member of a new transcription factor family linked to antibiotic metabolism in actinomycetes. PLoS ONE 7: e41359.
-
(2012)
PLoS ONE
, vol.7
-
-
Xu, Q.1
van Wezel, G.P.2
Chiu, H.J.3
Jaroszewski, L.4
Klock, H.E.5
-
38
-
-
0038579429
-
The MerR family of transcriptional regulators
-
Brown NL, Stoyanov JV, Kidd SP, Hobman JL, (2003) The MerR family of transcriptional regulators. FEMS Microbiol Rev 27: 145-163.
-
(2003)
FEMS Microbiol Rev
, vol.27
, pp. 145-163
-
-
Brown, N.L.1
Stoyanov, J.V.2
Kidd, S.P.3
Hobman, J.L.4
-
39
-
-
44949249999
-
Structure, function, and evolution of bacterial ATP-binding cassette systems
-
Davidson AL, Dassa E, Orelle C, Chen J, (2008) Structure, function, and evolution of bacterial ATP-binding cassette systems. Microbiol Mol Biol Rev 72: 317-364.
-
(2008)
Microbiol Mol Biol Rev
, vol.72
, pp. 317-364
-
-
Davidson, A.L.1
Dassa, E.2
Orelle, C.3
Chen, J.4
-
40
-
-
0031943304
-
The Escherichia coli ATP-binding cassette (ABC) proteins
-
Linton KJ, Higgins CF, (1998) The Escherichia coli ATP-binding cassette (ABC) proteins. Mol Microbiol 28: 5-13.
-
(1998)
Mol Microbiol
, vol.28
, pp. 5-13
-
-
Linton, K.J.1
Higgins, C.F.2
-
41
-
-
0033222857
-
The major facilitator superfamily
-
Saier MH Jr, Beatty JT, Goffeau A, Harley KT, Heijne WH, et al. (1999) The major facilitator superfamily. J Mol Microbiol Biotechnol 1: 257-279.
-
(1999)
J Mol Microbiol Biotechnol
, vol.1
, pp. 257-279
-
-
Saier Jr., M.H.1
Beatty, J.T.2
Goffeau, A.3
Harley, K.T.4
Heijne, W.H.5
-
42
-
-
38949094492
-
Cytochrome p450 and chemical toxicology
-
Guengerich FP, (2008) Cytochrome p450 and chemical toxicology. Chem Res Toxicol 21: 70-83.
-
(2008)
Chem Res Toxicol
, vol.21
, pp. 70-83
-
-
Guengerich, F.P.1
-
43
-
-
52449092491
-
Nocardiopsis valliformis sp. nov., an alkaliphilic actinomycete isolated from alkali lake soil in China
-
Yang R, Zhang LP, Guo LG, Shi N, Lu Z, et al. (2008) Nocardiopsis valliformis sp. nov., an alkaliphilic actinomycete isolated from alkali lake soil in China. Int J Syst Evol Microbiol 58: 1542-1546.
-
(2008)
Int J Syst Evol Microbiol
, vol.58
, pp. 1542-1546
-
-
Yang, R.1
Zhang, L.P.2
Guo, L.G.3
Shi, N.4
Lu, Z.5
-
44
-
-
40449116758
-
Nocardiopsis ganjiahuensis sp. nov., isolated from a soil from Ganjiahu, China
-
Zhang X, Zhang LP, Yang R, Shi N, Lu Z, et al. (2008) Nocardiopsis ganjiahuensis sp. nov., isolated from a soil from Ganjiahu, China. Int J Syst Evol Microbiol 58: 195-199.
-
(2008)
Int J Syst Evol Microbiol
, vol.58
, pp. 195-199
-
-
Zhang, X.1
Zhang, L.P.2
Yang, R.3
Shi, N.4
Lu, Z.5
-
45
-
-
70450257594
-
Nocardiopsis litoralis sp. nov., a halophilic marine actinomycete isolated from a sea anemone
-
Chen YG, Wang YX, Zhang YQ, Tang SK, Liu ZX, et al. (2009) Nocardiopsis litoralis sp. nov., a halophilic marine actinomycete isolated from a sea anemone. Int J Syst Evol Microbiol 59: 2708-2713.
-
(2009)
Int J Syst Evol Microbiol
, vol.59
, pp. 2708-2713
-
-
Chen, Y.G.1
Wang, Y.X.2
Zhang, Y.Q.3
Tang, S.K.4
Liu, Z.X.5
-
46
-
-
0034084865
-
Who's your neighbor? New computational approaches for functional genomics
-
Galperin MY, Koonin EV, (2000) Who's your neighbor? New computational approaches for functional genomics. Nat Biotechnol 18: 609-613.
-
(2000)
Nat Biotechnol
, vol.18
, pp. 609-613
-
-
Galperin, M.Y.1
Koonin, E.V.2
-
48
-
-
33845909274
-
Effect of metC mutation on Salmonella gallinarum virulence and invasiveness in 1-day-old White Leghorn chickens
-
Shah DH, Shringi S, Desai AR, Heo EJ, Park JH, et al. (2007) Effect of metC mutation on Salmonella gallinarum virulence and invasiveness in 1-day-old White Leghorn chickens. Vet Microbiol 119: 352-357.
-
(2007)
Vet Microbiol
, vol.119
, pp. 352-357
-
-
Shah, D.H.1
Shringi, S.2
Desai, A.R.3
Heo, E.J.4
Park, J.H.5
-
49
-
-
2542622193
-
Cystathionine beta-lyase is important for virulence of Salmonella enterica serovar Typhimurium
-
Ejim LJ, D'Costa VM, Elowe NH, Loredo-Osti JC, Malo D, et al. (2004) Cystathionine beta-lyase is important for virulence of Salmonella enterica serovar Typhimurium. Infect Immun 72: 3310-3314.
-
(2004)
Infect Immun
, vol.72
, pp. 3310-3314
-
-
Ejim, L.J.1
D'Costa, V.M.2
Elowe, N.H.3
Loredo-Osti, J.C.4
Malo, D.5
-
50
-
-
33847338383
-
Inhibitors of bacterial cystathionine beta-lyase: leads for new antimicrobial agents and probes of enzyme structure and function
-
Ejim LJ, Blanchard JE, Koteva KP, Sumerfield R, Elowe NH, et al. (2007) Inhibitors of bacterial cystathionine beta-lyase: leads for new antimicrobial agents and probes of enzyme structure and function. J Med Chem 50: 755-764.
-
(2007)
J Med Chem
, vol.50
, pp. 755-764
-
-
Ejim, L.J.1
Blanchard, J.E.2
Koteva, K.P.3
Sumerfield, R.4
Elowe, N.H.5
-
51
-
-
3042601400
-
Identification of Burkholderia cenocepacia genes required for bacterial survival in vivo
-
Hunt TA, Kooi C, Sokol PA, Valvano MA, (2004) Identification of Burkholderia cenocepacia genes required for bacterial survival in vivo. Infect Immun 72: 4010-4022.
-
(2004)
Infect Immun
, vol.72
, pp. 4010-4022
-
-
Hunt, T.A.1
Kooi, C.2
Sokol, P.A.3
Valvano, M.A.4
-
52
-
-
23744435794
-
Diverse pathogenicity of Burkholderia cepacia complex strains in the Caenorhabditis elegans host model
-
Cardona ST, Wopperer J, Eberl L, Valvano MA, (2005) Diverse pathogenicity of Burkholderia cepacia complex strains in the Caenorhabditis elegans host model. FEMS Microbiol Lett 250: 97-104.
-
(2005)
FEMS Microbiol Lett
, vol.250
, pp. 97-104
-
-
Cardona, S.T.1
Wopperer, J.2
Eberl, L.3
Valvano, M.A.4
-
53
-
-
10944243117
-
Proteolysis as a regulatory mechanism
-
Ehrmann M, Clausen T, (2004) Proteolysis as a regulatory mechanism. Annu Rev Genet 38: 709-724.
-
(2004)
Annu Rev Genet
, vol.38
, pp. 709-724
-
-
Ehrmann, M.1
Clausen, T.2
-
54
-
-
34547190128
-
Molecular characterization of hsp20, encoding a small heat shock protein of Bifidobacterium breve UCC2003
-
Ventura M, Canchaya C, Zhang Z, Fitzgerald GF, van Sinderen D, (2007) Molecular characterization of hsp20, encoding a small heat shock protein of Bifidobacterium breve UCC2003. Appl Environ Microbiol 73: 4695-4703.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 4695-4703
-
-
Ventura, M.1
Canchaya, C.2
Zhang, Z.3
Fitzgerald, G.F.4
van Sinderen, D.5
-
55
-
-
0027425463
-
Stomatin: a putative cation transport regulator in the red cell membrane
-
Stewart GW, Argent AC, Dash BC, (1993) Stomatin: a putative cation transport regulator in the red cell membrane. Biochim Biophys Acta 1225: 15-25.
-
(1993)
Biochim Biophys Acta
, vol.1225
, pp. 15-25
-
-
Stewart, G.W.1
Argent, A.C.2
Dash, B.C.3
-
56
-
-
0034255952
-
Lifestyle evolution in symbiotic bacteria: insights from genomics
-
Moran NA, Wernegreen JJ, (2000) Lifestyle evolution in symbiotic bacteria: insights from genomics. Trends Ecol Evol 15: 321-326.
-
(2000)
Trends Ecol Evol
, vol.15
, pp. 321-326
-
-
Moran, N.A.1
Wernegreen, J.J.2
-
57
-
-
0035749612
-
The process of genome shrinkage in the obligate symbiont Buchnera aphidicola
-
Moran NA, Mira A, (2001) The process of genome shrinkage in the obligate symbiont Buchnera aphidicola. Genome Biol 2: 0054.1-0054.12.
-
(2001)
Genome Biol
, vol.2
, pp. 1-12
-
-
Moran, N.A.1
Mira, A.2
-
58
-
-
75649124547
-
De novo assembly of human genomes with massively parallel short read sequencing
-
Li R, Zhu H, Ruan J, Qian W, Fang X, et al. (2010) De novo assembly of human genomes with massively parallel short read sequencing. Genome Res 20: 265-272.
-
(2010)
Genome Res
, vol.20
, pp. 265-272
-
-
Li, R.1
Zhu, H.2
Ruan, J.3
Qian, W.4
Fang, X.5
-
59
-
-
34147132825
-
Identifying bacterial genes and endosymbiont DNA with Glimmer
-
Delcher AL, Bratke KA, Powers EC, Salzberg SL, (2007) Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics 23: 673-679.
-
(2007)
Bioinformatics
, vol.23
, pp. 673-679
-
-
Delcher, A.L.1
Bratke, K.A.2
Powers, E.C.3
Salzberg, S.L.4
-
60
-
-
0035861990
-
Automatic clustering of orthologs and in-paralogs from pairwise species comparisons
-
Remm M, Storm CE, Sonnhammer EL, (2001) Automatic clustering of orthologs and in-paralogs from pairwise species comparisons. J Mol Biol 314: 1041-1052.
-
(2001)
J Mol Biol
, vol.314
, pp. 1041-1052
-
-
Remm, M.1
Storm, C.E.2
Sonnhammer, E.L.3
-
61
-
-
33747892409
-
Automatic clustering of orthologs and inparalogs shared by multiple proteomes
-
Alexeyenko A, Tamas I, Liu G, Sonnhammer ELL, (2006) Automatic clustering of orthologs and inparalogs shared by multiple proteomes. Bioinformatics 22: e9-15.
-
(2006)
Bioinformatics
, vol.22
-
-
Alexeyenko, A.1
Tamas, I.2
Liu, G.3
Sonnhammer, E.L.L.4
-
62
-
-
74049108922
-
BLAST+: architecture and applications
-
Camacho C, Coulouris G, Avagyan V, Ma N, Papadopoulos J, et al. (2009) BLAST+: architecture and applications. BMC Bioinformatics 10: 421.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 421
-
-
Camacho, C.1
Coulouris, G.2
Avagyan, V.3
Ma, N.4
Papadopoulos, J.5
-
63
-
-
58149202169
-
The Transporter Classification Database: recent advances
-
Saier MH Jr, Yen MR, Noto K, Tamang DG, Elkan C, (2009) The Transporter Classification Database: recent advances. Nucleic Acids Res 37: D274-278.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Saier Jr., M.H.1
Yen, M.R.2
Noto, K.3
Tamang, D.G.4
Elkan, C.5
-
64
-
-
0032561132
-
Principles governing amino acid composition of integral membrane proteins: application to topology prediction
-
Tusnády GE, Simon I, (1998) Principles governing amino acid composition of integral membrane proteins: application to topology prediction. J Mol Biol 283: 489-506.
-
(1998)
J Mol Biol
, vol.283
, pp. 489-506
-
-
Tusnády, G.E.1
Simon, I.2
-
65
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, et al. (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
-
66
-
-
1542347067
-
Neighbor-net: an agglomerative method for the construction of phylogenetic networks
-
Bryant D, Moulton V, (2004) Neighbor-net: an agglomerative method for the construction of phylogenetic networks. Mol Biol Evol 21: 255-265.
-
(2004)
Mol Biol Evol
, vol.21
, pp. 255-265
-
-
Bryant, D.1
Moulton, V.2
-
67
-
-
34547588704
-
KAAS: an automatic genome annotation and pathway reconstruction server
-
Moriya Y, Itoh M, Okuda S, Yoshizawa AC, Kanehisa M, (2004) KAAS: an automatic genome annotation and pathway reconstruction server. Nucleic Acids Res 35: W182-185.
-
(2004)
Nucleic Acids Res
, vol.35
-
-
Moriya, Y.1
Itoh, M.2
Okuda, S.3
Yoshizawa, A.C.4
Kanehisa, M.5
-
68
-
-
48449095609
-
The CGView Server: a comparative genomics tool for circular genomes
-
Grant JR, Stothard P, (2008) The CGView Server: a comparative genomics tool for circular genomes. Nucleic Acids Res 36: W181-184.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Grant, J.R.1
Stothard, P.2
|