-
2
-
-
33846958783
-
An injected bacterial effector targets chromatin access for transcription factor NF-kappaB to alter transcription of host genes involved in immune responses
-
L. Arbibe, D.W. Kim, E. Batsche, T. Pedron, B. Mateescu, C. Muchardt, C. Parsot, and P.J. Sansonetti An injected bacterial effector targets chromatin access for transcription factor NF-kappaB to alter transcription of host genes involved in immune responses Nat. Immunol. 8 2007 47 56
-
(2007)
Nat. Immunol.
, vol.8
, pp. 47-56
-
-
Arbibe, L.1
Kim, D.W.2
Batsche, E.3
Pedron, T.4
Mateescu, B.5
Muchardt, C.6
Parsot, C.7
Sansonetti, P.J.8
-
3
-
-
79952534189
-
Regulation of chromatin by histone modifications
-
A.J. Bannister, and T. Kouzarides Regulation of chromatin by histone modifications Cell Res. 21 2011 381 395
-
(2011)
Cell Res.
, vol.21
, pp. 381-395
-
-
Bannister, A.J.1
Kouzarides, T.2
-
4
-
-
33750944019
-
Legionella pneumophila glucosyltransferase inhibits host elongation factor 1A
-
Y. Belyi, R. Niggeweg, B. Opitz, M. Vogelsgesang, S. Hippenstiel, M. Wilm, and K. Aktories Legionella pneumophila glucosyltransferase inhibits host elongation factor 1A Proc. Natl. Acad. Sci. USA 103 2006 16953 16958
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 16953-16958
-
-
Belyi, Y.1
Niggeweg, R.2
Opitz, B.3
Vogelsgesang, M.4
Hippenstiel, S.5
Wilm, M.6
Aktories, K.7
-
7
-
-
10044263696
-
Evidence in the Legionella pneumophila genome for exploitation of host cell functions and high genome plasticity
-
C. Cazalet, C. Rusniok, H. Brüggemann, N. Zidane, A. Magnier, L. Ma, M. Tichit, S. Jarraud, C. Bouchier, and F. Vandenesch Evidence in the Legionella pneumophila genome for exploitation of host cell functions and high genome plasticity Nat. Genet. 36 2004 1165 1173
-
(2004)
Nat. Genet.
, vol.36
, pp. 1165-1173
-
-
Cazalet, C.1
Rusniok, C.2
Brüggemann, H.3
Zidane, N.4
Magnier, A.5
Ma, L.6
Tichit, M.7
Jarraud, S.8
Bouchier, C.9
Vandenesch, F.10
-
8
-
-
0033636595
-
Synergistic coupling of histone H3 phosphorylation and acetylation in response to epidermal growth factor stimulation
-
P. Cheung, K.G. Tanner, W.L. Cheung, P. Sassone-Corsi, J.M. Denu, and C.D. Allis Synergistic coupling of histone H3 phosphorylation and acetylation in response to epidermal growth factor stimulation Mol. Cell 5 2000 905 915
-
(2000)
Mol. Cell
, vol.5
, pp. 905-915
-
-
Cheung, P.1
Tanner, K.G.2
Cheung, W.L.3
Sassone-Corsi, P.4
Denu, J.M.5
Allis, C.D.6
-
9
-
-
0038349211
-
The Legionella pneumophila LidA protein: A translocated substrate of the Dot/Icm system associated with maintenance of bacterial integrity
-
G.M. Conover, I. Derré, J.P. Vogel, and R.R. Isberg The Legionella pneumophila LidA protein: a translocated substrate of the Dot/Icm system associated with maintenance of bacterial integrity Mol. Microbiol. 48 2003 305 321
-
(2003)
Mol. Microbiol.
, vol.48
, pp. 305-321
-
-
Conover, G.M.1
Derré, I.2
Vogel, J.P.3
Isberg, R.R.4
-
10
-
-
50849115482
-
Legionella eukaryotic-like type IV substrates interfere with organelle trafficking
-
K.S. de Felipe, R.T. Glover, X. Charpentier, O.R. Anderson, M. Reyes, C.D. Pericone, and H.A. Shuman Legionella eukaryotic-like type IV substrates interfere with organelle trafficking PLoS Pathog. 4 2008 e1000117
-
(2008)
PLoS Pathog.
, vol.4
, pp. 1000117
-
-
De Felipe, K.S.1
Glover, R.T.2
Charpentier, X.3
Anderson, O.R.4
Reyes, M.5
Pericone, C.D.6
Shuman, H.A.7
-
11
-
-
0018687457
-
Charcoal-yeast extract agar: Primary isolation medium for Legionella pneumophila
-
J.C. Feeley, R.J. Gibson, G.W. Gorman, N.C. Langford, J.K. Rasheed, D.C. Mackel, and W.B. Baine Charcoal-yeast extract agar: primary isolation medium for Legionella pneumophila J. Clin. Microbiol. 10 1979 437 441
-
(1979)
J. Clin. Microbiol.
, vol.10
, pp. 437-441
-
-
Feeley, J.C.1
Gibson, R.J.2
Gorman, G.W.3
Langford, N.C.4
Rasheed, J.K.5
Mackel, D.C.6
Baine, W.B.7
-
12
-
-
79955831978
-
Improved peptide identification by targeted fragmentation using CID, HCD and ETD on an LTQ-Orbitrap Velos
-
C.K. Frese, A.F. Altelaar, M.L. Hennrich, D. Nolting, M. Zeller, J. Griep-Raming, A.J. Heck, and S. Mohammed Improved peptide identification by targeted fragmentation using CID, HCD and ETD on an LTQ-Orbitrap Velos J. Proteome Res. 10 2011 2377 2388
-
(2011)
J. Proteome Res.
, vol.10
, pp. 2377-2388
-
-
Frese, C.K.1
Altelaar, A.F.2
Hennrich, M.L.3
Nolting, D.4
Zeller, M.5
Griep-Raming, J.6
Heck, A.J.7
Mohammed, S.8
-
13
-
-
24344466882
-
DNA methylation and histone modifications: Teaming up to silence genes
-
F. Fuks DNA methylation and histone modifications: teaming up to silence genes Curr. Opin. Genet. Dev. 15 2005 490 495
-
(2005)
Curr. Opin. Genet. Dev.
, vol.15
, pp. 490-495
-
-
Fuks, F.1
-
14
-
-
79955473684
-
Operating on chromatin, a colorful language where context matters
-
K.E. Gardner, C.D. Allis, and B.D. Strahl Operating on chromatin, a colorful language where context matters J. Mol. Biol. 409 2011 36 46
-
(2011)
J. Mol. Biol.
, vol.409
, pp. 36-46
-
-
Gardner, K.E.1
Allis, C.D.2
Strahl, B.D.3
-
15
-
-
58549112996
-
Bioinformatics enrichment tools: Paths toward the comprehensive functional analysis of large gene lists
-
D.W. Huang, B.T. Sherman, and R.A. Lempicki Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists Nucleic Acids Res. 37 2009 1 13
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 1-13
-
-
Huang, D.W.1
Sherman, B.T.2
Lempicki, R.A.3
-
16
-
-
78049370513
-
Modulation of host cell function by Legionella pneumophila type IV effectors
-
A. Hubber, and C.R. Roy Modulation of host cell function by Legionella pneumophila type IV effectors Annu. Rev. Cell Dev. Biol. 26 2010 261 283
-
(2010)
Annu. Rev. Cell Dev. Biol.
, vol.26
, pp. 261-283
-
-
Hubber, A.1
Roy, C.R.2
-
17
-
-
84865280797
-
H3K9 and H3K14 acetylation co-occur at many gene regulatory elements, while H3K14ac marks a subset of inactive inducible promoters in mouse embryonic stem cells
-
K. Karmodiya, A.R. Krebs, M. Oulad-Abdelghani, H. Kimura, and L. Tora H3K9 and H3K14 acetylation co-occur at many gene regulatory elements, while H3K14ac marks a subset of inactive inducible promoters in mouse embryonic stem cells BMC Genomics 13 2012 424
-
(2012)
BMC Genomics
, vol.13
, pp. 424
-
-
Karmodiya, K.1
Krebs, A.R.2
Oulad-Abdelghani, M.3
Kimura, H.4
Tora, L.5
-
18
-
-
39849096721
-
Legionella translocates an E3 ubiquitin ligase that has multiple U-boxes with distinct functions
-
T. Kubori, A. Hyakutake, and H. Nagai Legionella translocates an E3 ubiquitin ligase that has multiple U-boxes with distinct functions Mol. Microbiol. 67 2008 1307 1319
-
(2008)
Mol. Microbiol.
, vol.67
, pp. 1307-1319
-
-
Kubori, T.1
Hyakutake, A.2
Nagai, H.3
-
19
-
-
0037111831
-
Histone methyltransferase activity associated with a human multiprotein complex containing the Enhancer of Zeste protein
-
A. Kuzmichev, K. Nishioka, H. Erdjument-Bromage, P. Tempst, and D. Reinberg Histone methyltransferase activity associated with a human multiprotein complex containing the Enhancer of Zeste protein Genes Dev. 16 2002 2893 2905
-
(2002)
Genes Dev.
, vol.16
, pp. 2893-2905
-
-
Kuzmichev, A.1
Nishioka, K.2
Erdjument-Bromage, H.3
Tempst, P.4
Reinberg, D.5
-
20
-
-
72849149423
-
Searching for SNPs with cloud computing
-
B. Langmead, M.C. Schatz, J. Lin, M. Pop, and S.L. Salzberg Searching for SNPs with cloud computing Genome Biol. 10 2009 R134
-
(2009)
Genome Biol.
, vol.10
, pp. 134
-
-
Langmead, B.1
Schatz, M.C.2
Lin, J.3
Pop, M.4
Salzberg, S.L.5
-
21
-
-
79952515250
-
A bacterial protein targets the BAHD1 chromatin complex to stimulate type III interferon response
-
A. Lebreton, G. Lakisic, V. Job, L. Fritsch, T.N. Tham, A. Camejo, P.J. Matteï, B. Regnault, M.A. Nahori, and D. Cabanes A bacterial protein targets the BAHD1 chromatin complex to stimulate type III interferon response Science 331 2011 1319 1321
-
(2011)
Science
, vol.331
, pp. 1319-1321
-
-
Lebreton, A.1
Lakisic, G.2
Job, V.3
Fritsch, L.4
Tham, T.N.5
Camejo, A.6
Matteï, P.J.7
Regnault, B.8
Nahori, M.A.9
Cabanes, D.10
-
22
-
-
76749083433
-
Jarid2 and PRC2, partners in regulating gene expression
-
G. Li, R. Margueron, M. Ku, P. Chambon, B.E. Bernstein, and D. Reinberg Jarid2 and PRC2, partners in regulating gene expression Genes Dev. 24 2010 368 380
-
(2010)
Genes Dev.
, vol.24
, pp. 368-380
-
-
Li, G.1
Margueron, R.2
Ku, M.3
Chambon, P.4
Bernstein, B.E.5
Reinberg, D.6
-
23
-
-
77953704524
-
The Legionella pneumophila F-box protein Lpp2082 (AnkB) modulates ubiquitination of the host protein parvin B and promotes intracellular replication
-
M. Lomma, D. Dervins-Ravault, M. Rolando, T. Nora, H.J. Newton, F.M. Sansom, T. Sahr, L. Gomez-Valero, M. Jules, E.L. Hartland, and C. Buchrieser The Legionella pneumophila F-box protein Lpp2082 (AnkB) modulates ubiquitination of the host protein parvin B and promotes intracellular replication Cell. Microbiol. 12 2010 1272 1291
-
(2010)
Cell. Microbiol.
, vol.12
, pp. 1272-1291
-
-
Lomma, M.1
Dervins-Ravault, D.2
Rolando, M.3
Nora, T.4
Newton, H.J.5
Sansom, F.M.6
Sahr, T.7
Gomez-Valero, L.8
Jules, M.9
Hartland, E.L.10
Buchrieser, C.11
-
24
-
-
33749657892
-
PTMs on H3 variants before chromatin assembly potentiate their final epigenetic state
-
A. Loyola, T. Bonaldi, D. Roche, A. Imhof, and G. Almouzni PTMs on H3 variants before chromatin assembly potentiate their final epigenetic state Mol. Cell 24 2006 309 316
-
(2006)
Mol. Cell
, vol.24
, pp. 309-316
-
-
Loyola, A.1
Bonaldi, T.2
Roche, D.3
Imhof, A.4
Almouzni, G.5
-
25
-
-
33646083240
-
Planktonic replication is essential for biofilm formation by Legionella pneumophila in a complex medium under static and dynamic flow conditions
-
J. Mampel, T. Spirig, S.S. Weber, J.A. Haagensen, S. Molin, and H. Hilbi Planktonic replication is essential for biofilm formation by Legionella pneumophila in a complex medium under static and dynamic flow conditions Appl. Environ. Microbiol. 72 2006 2885 2895
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 2885-2895
-
-
Mampel, J.1
Spirig, T.2
Weber, S.S.3
Haagensen, J.A.4
Molin, S.5
Hilbi, H.6
-
26
-
-
0037337003
-
A dimeric viral SET domain methyltransferase specific to Lys27 of histone H3
-
K.L. Manzur, A. Farooq, L. Zeng, O. Plotnikova, A.W. Koch, Sachchidanand, and M.M. Zhou A dimeric viral SET domain methyltransferase specific to Lys27 of histone H3 Nat. Struct. Biol. 10 2003 187 196
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 187-196
-
-
Manzur, K.L.1
Farooq, A.2
Zeng, L.3
Plotnikova, O.4
Koch, A.W.5
Sachchidanand6
Zhou, M.M.7
-
27
-
-
77949678340
-
Chromatin structure and the inheritance of epigenetic information
-
R. Margueron, and D. Reinberg Chromatin structure and the inheritance of epigenetic information Nat. Rev. Genet. 11 2010 285 296
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 285-296
-
-
Margueron, R.1
Reinberg, D.2
-
28
-
-
49449118512
-
A comprehensive library of histone mutants identifies nucleosomal residues required for H3K4 methylation
-
S. Nakanishi, B.W. Sanderson, K.M. Delventhal, W.D. Bradford, K. Staehling-Hampton, and A. Shilatifard A comprehensive library of histone mutants identifies nucleosomal residues required for H3K4 methylation Nat. Struct. Mol. Biol. 15 2008 881 888
-
(2008)
Nat. Struct. Mol. Biol.
, vol.15
, pp. 881-888
-
-
Nakanishi, S.1
Sanderson, B.W.2
Delventhal, K.M.3
Bradford, W.D.4
Staehling-Hampton, K.5
Shilatifard, A.6
-
29
-
-
67650718130
-
NLStradamus: A simple Hidden Markov Model for nuclear localization signal prediction
-
A.N. Nguyen Ba, A. Pogoutse, N. Provart, and A.M. Moses NLStradamus: a simple Hidden Markov Model for nuclear localization signal prediction BMC Bioinformatics 10 2009 202
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 202
-
-
Nguyen Ba, A.N.1
Pogoutse, A.2
Provart, N.3
Moses, A.M.4
-
30
-
-
69849087003
-
Molecular mimicry: An important virulence strategy employed by Legionella pneumophila to subvert host functions
-
T. Nora, M. Lomma, L. Gomez-Valero, and C. Buchrieser Molecular mimicry: an important virulence strategy employed by Legionella pneumophila to subvert host functions Future Microbiol. 4 2009 691 701
-
(2009)
Future Microbiol.
, vol.4
, pp. 691-701
-
-
Nora, T.1
Lomma, M.2
Gomez-Valero, L.3
Buchrieser, C.4
-
31
-
-
80052154073
-
Bacteria-induced natural product formation in the fungus Aspergillus nidulans requires Saga/Ada-mediated histone acetylation
-
H.W. Nützmann, Y. Reyes-Dominguez, K. Scherlach, V. Schroeckh, F. Horn, A. Gacek, J. Schümann, C. Hertweck, J. Strauss, and A.A. Brakhage Bacteria-induced natural product formation in the fungus Aspergillus nidulans requires Saga/Ada-mediated histone acetylation Proc. Natl. Acad. Sci. USA 108 2011 14282 14287
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 14282-14287
-
-
Nützmann, H.W.1
Reyes-Dominguez, Y.2
Scherlach, K.3
Schroeckh, V.4
Horn, F.5
Gacek, A.6
Schümann, J.7
Hertweck, C.8
Strauss, J.9
Brakhage, A.A.10
-
32
-
-
77955637905
-
Histone methylation by NUE, a novel nuclear effector of the intracellular pathogen Chlamydia trachomatis
-
M.E. Pennini, S. Perrinet, A. Dautry-Varsat, and A. Subtil Histone methylation by NUE, a novel nuclear effector of the intracellular pathogen Chlamydia trachomatis PLoS Pathog. 6 2010 e1000995
-
(2010)
PLoS Pathog.
, vol.6
, pp. 1000995
-
-
Pennini, M.E.1
Perrinet, S.2
Dautry-Varsat, A.3
Subtil, A.4
-
33
-
-
33845487512
-
SET domain protein lysine methyltransferases: Structure, specificity and catalysis
-
C. Qian, and M.M. Zhou SET domain protein lysine methyltransferases: Structure, specificity and catalysis Cell. Mol. Life Sci. 63 2006 2755 2763
-
(2006)
Cell. Mol. Life Sci.
, vol.63
, pp. 2755-2763
-
-
Qian, C.1
Zhou, M.M.2
-
34
-
-
0034632829
-
Regulation of chromatin structure by site-specific histone H3 methyltransferases
-
S. Rea, F. Eisenhaber, D. O'Carroll, B.D. Strahl, Z.W. Sun, M. Schmid, S. Opravil, K. Mechtler, C.P. Ponting, C.D. Allis, and T. Jenuwein Regulation of chromatin structure by site-specific histone H3 methyltransferases Nature 406 2000 593 599
-
(2000)
Nature
, vol.406
, pp. 593-599
-
-
Rea, S.1
Eisenhaber, F.2
O'Carroll, D.3
Strahl, B.D.4
Sun, Z.W.5
Schmid, M.6
Opravil, S.7
Mechtler, K.8
Ponting, C.P.9
Allis, C.D.10
Jenuwein, T.11
-
35
-
-
84858049415
-
Post-translational modifications of host proteins by Legionella pneumophila: A sophisticated survival strategy
-
M. Rolando, and C. Buchrieser Post-translational modifications of host proteins by Legionella pneumophila: a sophisticated survival strategy Future Microbiol. 7 2012 369 381
-
(2012)
Future Microbiol.
, vol.7
, pp. 369-381
-
-
Rolando, M.1
Buchrieser, C.2
-
36
-
-
65349151312
-
Two small ncRNAs jointly govern virulence and transmission in Legionella pneumophila
-
T. Sahr, H. Brüggemann, M. Jules, M. Lomma, C. Albert-Weissenberger, C. Cazalet, and C. Buchrieser Two small ncRNAs jointly govern virulence and transmission in Legionella pneumophila Mol. Microbiol. 72 2009 741 762
-
(2009)
Mol. Microbiol.
, vol.72
, pp. 741-762
-
-
Sahr, T.1
Brüggemann, H.2
Jules, M.3
Lomma, M.4
Albert-Weissenberger, C.5
Cazalet, C.6
Buchrieser, C.7
-
37
-
-
84860771585
-
Deep sequencing defines the transcriptional map of L. pneumophila and identifies growth phase-dependent regulated ncRNAs implicated in virulence
-
T. Sahr, C. Rusniok, D. Dervins-Ravault, O. Sismeiro, J.Y. Coppee, and C. Buchrieser Deep sequencing defines the transcriptional map of L. pneumophila and identifies growth phase-dependent regulated ncRNAs implicated in virulence RNA Biol. 9 2012 503 519
-
(2012)
RNA Biol.
, vol.9
, pp. 503-519
-
-
Sahr, T.1
Rusniok, C.2
Dervins-Ravault, D.3
Sismeiro, O.4
Coppee, J.Y.5
Buchrieser, C.6
-
38
-
-
84866933793
-
Citrullination of histone H3 interferes with HP1-mediated transcriptional repression
-
P. Sharma, S. Azebi, P. England, T. Christensen, A. Møller-Larsen, T. Petersen, E. Batsché, and C. Muchardt Citrullination of histone H3 interferes with HP1-mediated transcriptional repression PLoS Genet. 8 2012 e1002934
-
(2012)
PLoS Genet.
, vol.8
, pp. 1002934
-
-
Sharma, P.1
Azebi, S.2
England, P.3
Christensen, T.4
Møller-Larsen, A.5
Petersen, T.6
Batsché, E.7
Muchardt, C.8
-
39
-
-
0034610814
-
The language of covalent histone modifications
-
B.D. Strahl, and C.D. Allis The language of covalent histone modifications Nature 403 2000 41 45
-
(2000)
Nature
, vol.403
, pp. 41-45
-
-
Strahl, B.D.1
Allis, C.D.2
-
40
-
-
0037020199
-
Structure and catalytic mechanism of a SET domain protein methyltransferase
-
R.C. Trievel, B.M. Beach, L.M. Dirk, R.L. Houtz, and J.H. Hurley Structure and catalytic mechanism of a SET domain protein methyltransferase Cell 111 2002 91 103
-
(2002)
Cell
, vol.111
, pp. 91-103
-
-
Trievel, R.C.1
Beach, B.M.2
Dirk, L.M.3
Houtz, R.L.4
Hurley, J.H.5
-
41
-
-
0036850325
-
Cellular memory and the histone code
-
B.M. Turner Cellular memory and the histone code Cell 111 2002 285 291
-
(2002)
Cell
, vol.111
, pp. 285-291
-
-
Turner, B.M.1
-
42
-
-
79951570106
-
Transcriptional repressive H3K9 and H3K27 methylations contribute to DNMT1-mediated DNA methylation recovery
-
C.M. Wong, C.C. Wong, Y.L. Ng, S.L. Au, F.C. Ko, and I.O. Ng Transcriptional repressive H3K9 and H3K27 methylations contribute to DNMT1-mediated DNA methylation recovery PLoS ONE 6 2011 e16702
-
(2011)
PLoS ONE
, vol.6
, pp. 16702
-
-
Wong, C.M.1
Wong, C.C.2
Ng, Y.L.3
Au, S.L.4
Ko, F.C.5
Ng, I.O.6
-
43
-
-
53849146020
-
Model-based analysis of ChIP-Seq (MACS)
-
Y. Zhang, T. Liu, C.A. Meyer, J. Eeckhoute, D.S. Johnson, B.E. Bernstein, C. Nusbaum, R.M. Myers, M. Brown, W. Li, and X.S. Liu Model-based analysis of ChIP-Seq (MACS) Genome Biol. 9 2008 R137
-
(2008)
Genome Biol.
, vol.9
, pp. 137
-
-
Zhang, Y.1
Liu, T.2
Meyer, C.A.3
Eeckhoute, J.4
Johnson, D.S.5
Bernstein, B.E.6
Nusbaum, C.7
Myers, R.M.8
Brown, M.9
Li, W.10
Liu, X.S.11
|