Long-range targeted manipulation of the drosophila genome by site-specific integration and recombinational resolution

Genetics

Volumn 193, Issue 2, 2013, Pages 411-419

  Wesolowska, Natalia ^a   Rong, Yikang S ^b  

^a NATIONAL CANCER INSTITUTE   (United States)

^b NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA FRAGMENT; INTEGRASE;

ARTICLE; BINDING SITE; CROSSING OVER; DNA INTEGRATION; DNA MODIFICATION; DNA RECOMBINATION; DNA STRAND BREAKAGE; DROSOPHILA; GENE DUPLICATION; GENE INSERTION; GENE LOCUS; GENE VECTOR; GENETIC MANIPULATION; HOMOLOGOUS RECOMBINATION; INSECT GENOME; MEIOTIC RECOMBINATION; NBS GENE; NONHUMAN; PRIORITY JOURNAL; SITE DIRECTED MUTAGENESIS;

ANIMALS; ATTACHMENT SITES, MICROBIOLOGICAL; CARRIER PROTEINS; CROSSING OVER, GENETIC; DNA BREAKS; DROSOPHILA; DROSOPHILA PROTEINS; GENE DUPLICATION; GENE TARGETING; GENETIC VECTORS; GENOME, INSECT; INTEGRASES; MEIOSIS; MUTAGENESIS, INSERTIONAL; MUTAGENESIS, SITE-DIRECTED;

EUKARYOTA;

EID: 84876393764     PISSN: 00166731     EISSN: 19432631     Source Type: Journal    
DOI: 10.1534/genetics.112.145631     Document Type: Article

References (23)

1. Bellen, H. J., R. W. Levis, Y. He, J. W. Carlson, M. Evans-Holm et al., 2011 The Drosophila gene disruption project: progress using transposons with distinctive site specificities. Genetics 188: 731-743.
2. Bischof, J., R. K. Maeda, M. Hediger, F. Karch, and K. Basler, 2007 An optimized transgenesis system for Drosophila using germ-line-specific phiC31 integrases. Proc. Natl. Acad. Sci. USA 104: 3312-3317.
3. Copeland, N. G., N.A. Jenkins, and D. L. Court, 2001 Recombineering: a powerful new tool for mouse functional genomics. Nat. Rev. Genet. 2: 769-779.
4. Gao, G., C. McMahon, J. Chen, and Y. S. Rong, 2008 A powerful method combining homologous recombination and site-specific recombination for targeted mutagenesis in Drosophila. Proc. Natl. Acad. Sci. USA 105: 13999-14004.
5. Gao, G., Y. Cheng, N. Wesolowska, and Y. S. Rong, 2011 Paternal imprint essential for the inheritance of telomere identity in Drosophila. Proc. Natl. Acad. Sci. USA 108: 4932-4937.
6. Gloor, G. B., N. A. Nassif, D. M. Johnson-Schlitz, C. R. Preston, and W. R. Engels, 1991 Targeted gene replacement in Drosophila via P element-induced gap repair. Science 253: 1110-1117.
7. Gong, W. J., and K. G. Golic, 2003 Ends-out, or replacement, gene targeting in Drosophila. Proc. Natl. Acad. Sci. USA 100: 2556-2561.
8. Green, M. M., 1962 The effects of tandem duplications on crossing over in Drosophila melanogaster. Genetica 33: 154-164.
9. Gronke, S., D. F. Clarke, S. Broughton, T. D. Andrews, and L. Partridge, 2010 Molecular evolution and functional characterization of Drosophila insulin-like peptides. PLoS Genet. 6: e1000857.
10. Groth, A. C., M. Fish, R. Nusse, and M. P. Calos, 2004 Construction of transgenic Drosophila by using the site-specific integrase from phage phiC31. Genetics 166: 1775-1782.
11. Huang, J., W. Zhou, W. Dong, and Y. Hong, 2009 Targeted engineering of the Drosophila genome. Fly (Austin) 3: 274-277.
12. Iampietro, C., M. Gummalla, A. Mutero, F. Karch, and R. K. Maeda, 2010 Initiator elements function to determine the activity state of BX-C enhancers. PLoS Genet. 6: e1001260.
13. Joyce, E. F., A. Paul, K. E. Chen, N. Tanneti, and K. S. McKim, 2012 Multiple barriers to nonhomologous DNA end joining during meiosis in Drosophila. Genetics 191: 739-746.
14. Liang, X., and J. A. Sved, 2009 Repair of P element ends following hybrid element excision leads to recombination in Drosophila melanogaster. Heredity (Edinb) 102: 127-132.
15. Prado, F., and A. Aguilera, 1995 Role of reciprocal exchange, one-ended invasion crossover and single-strand annealing on inverted and direct repeat recombination in yeast: different requirements for the RAD1, RAD10 and RAD52 genes. Genetics 139: 109-123.
16. Rong, Y. S., and K. G. Golic, 2000 Gene targeting by homologous recombination in Drosophila. Science 288: 2013-2018.
17. Rong, Y. S., and K. G. Golic, 2003 The homologous chromosome is an effective template for the repair of mitotic DNA doublestrand breaks in Drosophila. Genetics 165: 1831-1842.
18. Rong, Y. S., S. W. Titen, H. B. Xie, M. M. Golic, M. Bastiani et al., 2002 Targeted mutagenesis by homologous recombination in D. melanogaster. Genes Dev. 16: 1568-1581.
19. Spitzweck, B., M. Brankatschk, and B. J. Dickson, 2010 Distinct protein domains and expression patterns confer divergent axon guidance functions for Drosophila Robo receptors. Cell 140: 409-420.
20. Venken, K. J., Y. He, R. A. Hoskins, and H. J. Bellen, 2006 P[acman]: a BAC transgenic platform for targeted insertion of large DNA fragments in D. melanogaster. Science 314: 1747-1751.
21. Venken, K. J., K. L. Schulze, N. A. Haelterman, H. Pan, Y. He et al., 2011 MiMIC: a highly versatile transposon insertion resource for engineering Drosophila melanogaster genes. Nat. Methods 8: 737-743.
22. Wei, D. S., and Y. S. Rong, 2007 A genetic screen for DNA doublestrand break repair mutations in Drosophila. Genetics 177: 63-77.
23. Weng, R., Y. W. Chen, N. Bushati, A. Cliffe, and S. M. Cohen, 2009 Recombinase-mediated cassette exchange provides a versatile platform for gene targeting: knockout of miR-31b. Genetics 183: 399-402.