메뉴 건너뛰기




Volumn 51, Issue 1, 2013, Pages 1-12

Plant mitochondrial genome peculiarities evolving in the earliest vascular plant lineages

Author keywords

Endosymbiotic gene transfer; Group I and group II introns; Organelle DNA recombination; RNA editing

Indexed keywords

ANTHOCEROTOPHYTA; BACTERIA (MICROORGANISMS); BRYOPHYTA; BRYOPHYTES; EUKARYOTA; ISOETALES; LYCOPODIALES; LYCOPODIOPHYTA; MAGNOLIOPHYTA; MARCHANTIOPHYTA; SELAGINELLALES; SPERMATOPHYTA; TRACHEOPHYTA;

EID: 84876257763     PISSN: 16744918     EISSN: 17596831     Source Type: Journal    
DOI: 10.1111/j.1759-6831.2012.00228.x     Document Type: Review
Times cited : (26)

References (86)
  • 1
    • 0037162534 scopus 로고    scopus 로고
    • Punctuated evolution of mitochondrial gene content: High and variable rates of mitochondrial gene loss and transfer to the nucleus during angiosperm evolution
    • Adams KL, Qiu YL, Stoutemyer M, Palmer JD. 2002. Punctuated evolution of mitochondrial gene content: High and variable rates of mitochondrial gene loss and transfer to the nucleus during angiosperm evolution. Proceedings of the National Academy of Sciences USA 99: 9905-9912.
    • (2002) Proceedings of the National Academy of Sciences USA , vol.99 , pp. 9905-9912
    • Adams, K.L.1    Qiu, Y.L.2    Stoutemyer, M.3    Palmer, J.D.4
  • 4
    • 80051930449 scopus 로고    scopus 로고
    • Origins and recombination of the bacterial-sized multichro-mosomal mitochondrial genome of cucumber
    • Alverson AJ, Rice DW, Dickinson S, Barry K, Palmer JD. 2011. Origins and recombination of the bacterial-sized multichro-mosomal mitochondrial genome of cucumber. Plant Cell 23: 2499-2513.
    • (2011) Plant Cell , vol.23 , pp. 2499-2513
    • Alverson, A.J.1    Rice, D.W.2    Dickinson, S.3    Barry, K.4    Palmer, J.D.5
  • 5
    • 77952837838 scopus 로고    scopus 로고
    • Insights into the evolution of mitochondrial genome size from complete sequences of citrullus lanatus and cucurbita pepo (Cucurbitaceae)
    • Alverson AJ, Wei X, Rice DW, Stern DB, Barry K, Palmer JD. 2010. Insights into the evolution of mitochondrial genome size from complete sequences of Citrullus lanatus and Cucurbita pepo (Cucurbitaceae). Molecular Biology and Evolution 27: 1436-1448.
    • (2010) Molecular Biology and Evolution , vol.27 , pp. 1436-1448
    • Alverson, A.J.1    Wei, X.2    Rice, D.W.3    Stern, D.B.4    Barry, K.5    Palmer, J.D.6
  • 6
    • 79960078998 scopus 로고    scopus 로고
    • Plant mitochondrial genomes and recombination
    • Kempken F ed. New York: Springer
    • Arrieta-Montiel MP, Mackenzie SA. 2011. Plant mitochondrial genomes and recombination. In: Kempken F ed. Plant mitochondria. New York: Springer. 65-82.
    • (2011) Plant Mitochondria , pp. 65-82
    • Arrieta-Montiel, M.P.1    Mackenzie, S.A.2
  • 7
    • 71549141989 scopus 로고    scopus 로고
    • Diversity of the arabidopsis mitochondrial genome occurs via nuclear-controlled recombination activity
    • Arrieta-Montiel MP, Shedge V, Davila J, Christensen AC, Mackenzie SA. 2009. Diversity of the Arabidopsis mitochondrial genome occurs via nuclear-controlled recombination activity. Genetics 183: 1261-1268.
    • (2009) Genetics , vol.183 , pp. 1261-1268
    • Arrieta-Montiel, M.P.1    Shedge, V.2    Davila, J.3    Christensen, A.C.4    Mackenzie, S.A.5
  • 8
    • 0342368629 scopus 로고    scopus 로고
    • Phage T4-like intermediates of DNA replication and recombination in the mitochondria of the higher plant chenopodium album (L.)
    • Backert S, Börner T. 2000. Phage T4-like intermediates of DNA replication and recombination in the mitochondria of the higher plant Chenopodium album (L.). Current Genetics 37: 304-314.
    • (2000) Current Genetics , vol.37 , pp. 304-314
    • Backert, S.1    Börner, T.2
  • 9
    • 0030118020 scopus 로고    scopus 로고
    • Electron microscopic investigation of mitochondrial DNA from chenopodium album (L.)
    • Backert S, Lurz R, Börner T. 1996. Electron microscopic investigation of mitochondrial DNA from Chenopodium album (L.). Current Genetics 29: 427-436.
    • (1996) Current Genetics , vol.29 , pp. 427-436
    • Backert, S.1    Lurz, R.2    Börner, T.3
  • 10
    • 0031127988 scopus 로고    scopus 로고
    • High content, size and distribution of single-stranded DNA in the mitochondria of chenopodium album (L.)
    • Backert S, Lurz R, Oyarzabal OA, Börner T. 1997. High content, size and distribution of single-stranded DNA in the mitochondria of Chenopodium album (L.). Plant Molecular Biology 33: 1037-1050.
    • (1997) Plant Molecular Biology , vol.33 , pp. 1037-1050
    • Backert, S.1    Lurz, R.2    Oyarzabal, O.A.3    Börner, T.4
  • 11
    • 67651011899 scopus 로고    scopus 로고
    • Selaginella and 400 million years of separation
    • Banks JA. 2009. Selaginella and 400 million years of separation. Annual Review of Plant Biology 60: 223-238.
    • (2009) Annual Review of Plant Biology , vol.60 , pp. 223-238
    • Banks, J.A.1
  • 13
    • 65349185054 scopus 로고    scopus 로고
    • A one-megabase physical map provides insights on gene organization in the enormous mitochondrial genome of cucumber
    • Bartoszewski G, Gawronski P, Szklarczyk M, Verbakel H, Havey MJ. 2009. A one-megabase physical map provides insights on gene organization in the enormous mitochondrial genome of cucumber. Genome 52: 299-307.
    • (2009) Genome , vol.52 , pp. 299-307
    • Bartoszewski, G.1    Gawronski, P.2    Szklarczyk, M.3    Verbakel, H.4    Havey, M.J.5
  • 14
    • 59649130448 scopus 로고    scopus 로고
    • The horsetail equisetum arvense mitochondria share two group I introns with the liverwort marchantia, acquired a novel group II intron but lost intron-encoded ORFs
    • Bégu D, Araya A. 2009. The horsetail Equisetum arvense mitochondria share two group I introns with the liverwort Marchantia, acquired a novel group II intron but lost intron-encoded ORFs. Current Genetics 55: 69-79.
    • (2009) Current Genetics , vol.55 , pp. 69-79
    • Bégu, D.1    Araya, A.2
  • 15
    • 0027490348 scopus 로고
    • Reaching for the ring: The study of mitochondrial genome structure
    • Bendich AJ. 1993. Reaching for the ring: The study of mitochondrial genome structure. Current Genetics 24: 279-290.
    • (1993) Current Genetics , vol.24 , pp. 279-290
    • Bendich, A.J.1
  • 16
    • 34248578392 scopus 로고    scopus 로고
    • The size and form of chromosomes are constant in the nucleus, but highly variable in bacteria, mitochondria and chloroplasts
    • Bendich AJ. 2007. The size and form of chromosomes are constant in the nucleus, but highly variable in bacteria, mitochondria and chloroplasts. Bioessays 29: 474-483.
    • (2007) Bioessays , vol.29 , pp. 474-483
    • Bendich, A.J.1
  • 17
    • 84856582986 scopus 로고    scopus 로고
    • A reevaluation of rice mitochondrial evolution based on the complete sequence of malefertile and male-sterile mitochondrial genomes
    • Bentolila S, Stefanov S. 2012. A reevaluation of rice mitochondrial evolution based on the complete sequence of malefertile and male-sterile mitochondrial genomes. Plant Physiology 158: 996-1017.
    • (2012) Plant Physiology , vol.158 , pp. 996-1017
    • Bentolila, S.1    Stefanov, S.2
  • 18
    • 73449106108 scopus 로고    scopus 로고
    • The give-and-take of DNA: Horizontal gene transfer in plants
    • Bock R. 2010. The give-and-take of DNA: Horizontal gene transfer in plants. Trends in Plant Science 15: 11-22.
    • (2010) Trends in Plant Science , vol.15 , pp. 11-22
    • Bock, R.1
  • 20
    • 39749142161 scopus 로고    scopus 로고
    • The mitochondrial genome of the gymnosperm cycas taitungensis contains a novel family of short interspersed elements, bpu sequences, and abundant RNA editing sites
    • Chaw SM, Chun-Chieh SA, Wang D, Wu YW, Liu SM, Chou TY. 2008. The mitochondrial genome of the gymnosperm Cycas taitungensis contains a novel family of short interspersed elements, Bpu sequences, and abundant RNA editing sites. Molecular Biology and Evolution 25: 603-615.
    • (2008) Molecular Biology and Evolution , vol.25 , pp. 603-615
    • Chaw, S.M.1    Chun-Chieh, S.A.2    Wang, D.3    Wu, Y.W.4    Liu, S.M.5    Chou, T.Y.6
  • 21
    • 79952517415 scopus 로고    scopus 로고
    • Substo-ichiometrically different mitotypes coexist in mitochondrial genomes of brassica napus L
    • Chen J, Guan R, Chang S, Du T, Zhang H, Xing H. 2011. Substo-ichiometrically different mitotypes coexist in mitochondrial genomes of Brassica napus L. PLoS One 6: e17662.
    • (2011) PLoS One , vol.6
    • Chen, J.1    Guan, R.2    Chang, S.3    Du, T.4    Zhang, H.5    Xing, H.6
  • 23
    • 77950685622 scopus 로고    scopus 로고
    • A scenario of mitochondrial genome evolution in maize based on rearrangement events
    • Darracq A, Varre JS, Touzet P. 2010. A scenario of mitochondrial genome evolution in maize based on rearrangement events. BMC Genomics 11: 233.
    • (2010) BMC Genomics , vol.11 , pp. 233
    • Darracq, A.1    Varre, J.S.2    Touzet, P.3
  • 24
    • 3042698703 scopus 로고    scopus 로고
    • Distribution of introns in the mitochondrial gene nad1 in land plants: Phylogenetic and molecular evolutionary implications
    • Dombrovska E, Qiu YL. 2004. Distribution of introns in the mitochondrial gene nad1 in land plants: phylogenetic and molecular evolutionary implications. Molecular Phylogenetics and Evolution 32: 246-263.
    • (2004) Molecular Phylogenetics and Evolution , vol.32 , pp. 246-263
    • Dombrovska, E.1    Qiu, Y.L.2
  • 25
    • 0033301420 scopus 로고    scopus 로고
    • Phylogenetic relationships of land plants using mitochondrial small-subunit rDNA sequences
    • Duff RJ, Nickrent DL. 1999. Phylogenetic relationships of land plants using mitochondrial small-subunit rDNA sequences. American Journal of Botany 86: 372-386.
    • (1999) American Journal of Botany , vol.86 , pp. 372-386
    • Duff, R.J.1    Nickrent, D.L.2
  • 26
    • 84876220942 scopus 로고    scopus 로고
    • Land plant RNA editing or: Don't be fooled by plant organellar DNA sequences
    • Bock R, Knoop V eds. Dordrecht: Springer
    • Finster S, Legen J, Qu Y, Schmitz-Linneweber C. 2012. Land plant RNA editing or: Don't be fooled by plant organellar DNA sequences. In: Bock R, Knoop V eds. Genomics of chloroplasts and mitochondria. Dordrecht: Springer. 293-321.
    • (2012) Genomics of Chloroplasts and Mitochondria , pp. 293-321
    • Finster, S.1    Legen, J.2    Qu, Y.3    Schmitz-Linneweber, C.4
  • 27
    • 77951909120 scopus 로고    scopus 로고
    • Discovery of global genomic re-organization based on comparison of two newly sequenced rice mitochondrial genomes with cytoplasmic male sterility-related genes
    • Fujii S, Kazama T, Yamada M, Toriyama K. 2010. Discovery of global genomic re-organization based on comparison of two newly sequenced rice mitochondrial genomes with cytoplasmic male sterility-related genes. BMC Genomics 11: 209.
    • (2010) BMC Genomics , vol.11 , pp. 209
    • Fujii, S.1    Kazama, T.2    Yamada, M.3    Toriyama, K.4
  • 30
    • 79954584259 scopus 로고    scopus 로고
    • A unique transcriptome: 1782 positions of RNA editing alter 1406 codon identities in mitochondrial mRNAs of the lycophyte isoetes engelmannii
    • Grewe F, Herres S, Viehover P, Polsakiewicz M, Weisshaar B, Knoop V. 2011. A unique transcriptome: 1782 positions of RNA editing alter 1406 codon identities in mitochondrial mRNAs of the lycophyte Isoetes engelmannii. Nucleic Acids Research 39: 2890-2902.
    • (2011) Nucleic Acids Research , vol.39 , pp. 2890-2902
    • Grewe, F.1    Herres, S.2    Viehover, P.3    Polsakiewicz, M.4    Weisshaar, B.5    Knoop, V.6
  • 31
    • 69849093397 scopus 로고    scopus 로고
    • A trans-splicing group I intron and tRNA-hyperediting in the mitochondrial genome of the lycophyte isoetes engelmannii
    • Grewe F, Viehoever P, Weisshaar B, Knoop V. 2009. A trans-splicing group I intron and tRNA-hyperediting in the mitochondrial genome of the lycophyte Isoetes engelmannii. Nucleic Acids Research 37: 5093-5104.
    • (2009) Nucleic Acids Research , vol.37 , pp. 5093-5104
    • Grewe, F.1    Viehoever, P.2    Weisshaar, B.3    Knoop, V.4
  • 32
    • 10344257212 scopus 로고    scopus 로고
    • Ancestors of trans-splicing mitochondrial introns support serial sister group relationships of hornworts and mosses with vascular plants
    • Groth-Malonek M, Pruchner D, Grewe F, Knoop V. 2005. Ancestors of trans-splicing mitochondrial introns support serial sister group relationships of hornworts and mosses with vascular plants. Molecular Biology and Evolution 22: 117-125.
    • (2005) Molecular Biology and Evolution , vol.22 , pp. 117-125
    • Groth-Malonek, M.1    Pruchner, D.2    Grewe, F.3    Knoop, V.4
  • 34
    • 34047228910 scopus 로고    scopus 로고
    • Evolution of a pseudogene: Exclusive survival of a functional mitochondrial nad7 gene supports haplomitrium as the earliest liverwort lineage and proposes a secondary loss of RNA editing in marchantiidae
    • Groth-Malonek M, Wahrmund U, Polsakiewicz M, Knoop V. 2007b. Evolution of a pseudogene: Exclusive survival of a functional mitochondrial nad7 gene supports Haplomitrium as the earliest liverwort lineage and proposes a secondary loss of RNA editing in Marchantiidae. Molecular Biology and Evolution 24: 1068-1074.
    • (2007) Molecular Biology and Evolution , vol.24 , pp. 1068-1074
    • Groth-Malonek, M.1    Wahrmund, U.2    Polsakiewicz, M.3    Knoop, V.4
  • 35
    • 79960100341 scopus 로고    scopus 로고
    • Extreme RNA editing in coding islands and abundant microsatellites in repeat sequences of selaginella moellendorffii mitochondria: The root of frequent plant mtDNA recombination in early tracheophytes
    • Hecht J, Grewe F, Knoop V. 2011. Extreme RNA editing in coding islands and abundant microsatellites in repeat sequences of Selaginella moellendorffii mitochondria: The root of frequent plant mtDNA recombination in early tracheophytes. Genome Biology and Evolution 3: 344-358.
    • (2011) Genome Biology and Evolution , vol.3 , pp. 344-358
    • Hecht, J.1    Grewe, F.2    Knoop, V.3
  • 36
    • 16344369451 scopus 로고    scopus 로고
    • Inferring phylogeny using genomic characters: A case study using land plant plastomes
    • Goffinet B, Hollowell V, Magill R eds. St. Louis: Missouri Botanical Garden Press
    • Kelch DG, Driskell A, Mishler BD. 2004. Inferring phylogeny using genomic characters: A case study using land plant plastomes. In: Goffinet B, Hollowell V, Magill R eds. Molecular systematics of bryophytes. St. Louis: Missouri Botanical Garden Press. 3-12.
    • (2004) Molecular Systematics of Bryophytes , pp. 3-12
    • Kelch, D.G.1    Driskell, A.2    Mishler, B.D.3
  • 37
    • 4744343662 scopus 로고    scopus 로고
    • The mitochondrial DNA of land plants: Peculiarities in phylogenetic perspective
    • Knoop V. 2004. The mitochondrial DNA of land plants: Peculiarities in phylogenetic perspective. Current Genetics 46: 123-139.
    • (2004) Current Genetics , vol.46 , pp. 123-139
    • Knoop, V.1
  • 38
    • 79955725431 scopus 로고    scopus 로고
    • Looking for sense in the nonsense: A short review of non-coding organellar DNA elucidating the phylogeny of bryophytes
    • Knoop V. 2010. Looking for sense in the nonsense: A short review of non-coding organellar DNA elucidating the phylogeny of bryophytes. Tropical Bryology 31: 50-60.
    • (2010) Tropical Bryology , vol.31 , pp. 50-60
    • Knoop, V.1
  • 39
    • 79951578730 scopus 로고    scopus 로고
    • When you can't trust the DNA: Rna editing changes transcript sequences
    • Knoop V. 2011. When you can't trust the DNA: RNA editing changes transcript sequences. Cellular and Molecular Life Sciences 68: 567-586.
    • (2011) Cellular and Molecular Life Sciences , vol.68 , pp. 567-586
    • Knoop, V.1
  • 40
    • 84874967272 scopus 로고    scopus 로고
    • Seed plant mitochondrial genomes: Complexity evolving
    • Bock R, Knoop V eds. Dordrecht: Springer
    • Knoop V. 2012. Seed plant mitochondrial genomes: Complexity evolving. In: Bock R, Knoop V eds. Genomics of chloroplasts and mitochondria. Dordrecht: Springer. 175-200.
    • (2012) Genomics of Chloroplasts and Mitochondria , pp. 175-200
    • Knoop, V.1
  • 41
    • 0029670967 scopus 로고    scopus 로고
    • Copia-, gypsy- and LINE-like retrotransposon fragments in the mitochondrial genome of arabidopsis thaliana
    • Knoop V, Unseld M, Marienfeld J, Brandt P, Sünkel S, Ullrich H, Brennicke A. 1996. copia-, gypsy- and LINE-like retrotransposon fragments in the mitochondrial genome of Arabidopsis thaliana. Genetics 142: 579-585.
    • (1996) Genetics , vol.142 , pp. 579-585
    • Knoop, V.1    Unseld, M.2    Marienfeld, J.3    Brandt, P.4    Sünkel, S.5    Ullrich, H.6    Brennicke, A.7
  • 42
    • 79960101585 scopus 로고    scopus 로고
    • Mitochondrial genome evolution in the plant lineage
    • Kempken F ed. New York: Springer
    • Knoop V, Volkmar U, Hecht J, Grewe F. 2010. Mitochondrial genome evolution in the plant lineage. In: Kempken F ed. Plant mitochondria. New York: Springer. 3-29.
    • (2010) Plant Mitochondria , pp. 3-29
    • Knoop, V.1    Volkmar, U.2    Hecht, J.3    Grewe, F.4
  • 43
    • 0030727612 scopus 로고    scopus 로고
    • Interorganellar gene transfer in bryophytes: The functional nad7 gene is nuclear encoded in marchantia polymorpha
    • Kobayashi Y, Knoop V, Fukuzawa H, Brennicke A, Ohyama K. 1997. Interorganellar gene transfer in bryophytes: The functional nad7 gene is nuclear encoded in Marchantia polymorpha. Molecular and General Genetics 256: 589-592.
    • (1997) Molecular and General Genetics , vol.256 , pp. 589-592
    • Kobayashi, Y.1    Knoop, V.2    Fukuzawa, H.3    Brennicke, A.4    Ohyama, K.5
  • 44
    • 77950867407 scopus 로고    scopus 로고
    • Introducing the plant RNA editing prediction and analysis computer tool PREPACT and an update on RNA editing site nomenclature
    • Lenz H, Rüdinger M, Volkmar U, Fischer S, Herres S, Grewe F, Knoop V. 2009. Introducing the plant RNA editing prediction and analysis computer tool PREPACT and an update on RNA editing site nomenclature. Current Genetics 56: 189-201.
    • (2009) Current Genetics , vol.56 , pp. 189-201
    • Lenz, H.1    Rüdinger, M.2    Volkmar, U.3    Fischer, S.4    Herres, S.5    Grewe, F.6    Knoop, V.7
  • 45
    • 67349286953 scopus 로고    scopus 로고
    • The complete mitochondrial genome sequence of the hornwort megaceros aenigmaticus shows a mixed mode of conservative yet dynamic evolution in early land plant mitochondrial genomes
    • Li L, Wang B, Liu Y, Qiu YL. 2009. The complete mitochondrial genome sequence of the hornwort Megaceros aenigmaticus shows a mixed mode of conservative yet dynamic evolution in early land plant mitochondrial genomes. Journal of Molecular Evolution 68: 665-678.
    • (2009) Journal of Molecular Evolution , vol.68 , pp. 665-678
    • Li, L.1    Wang, B.2    Liu, Y.3    Qiu, Y.L.4
  • 46
    • 0034815350 scopus 로고    scopus 로고
    • Small, repetitive DNAs contribute significantly to the expanded mitochondrial genome of cucumber
    • Lilly JW, Havey MJ. 2001. Small, repetitive DNAs contribute significantly to the expanded mitochondrial genome of cucumber. Genetics 159: 317-328.
    • (2001) Genetics , vol.159 , pp. 317-328
    • Lilly, J.W.1    Havey, M.J.2
  • 47
    • 79953125547 scopus 로고    scopus 로고
    • Comparative analysis of mitochondrial genomes between a wheat K-type cytoplasmic male sterility (CMS) line and its maintainer line
    • Liu H, Cui P, Zhan K, Lin Q, Zhuo G, Guo X, Ding F, Yang W, Liu D, Hu S, Yu J, Zhang A. 2011a. Comparative analysis of mitochondrial genomes between a wheat K-type cytoplasmic male sterility (CMS) line and its maintainer line. BMC Genomics 12: 163.
    • (2011) BMC Genomics , vol.12 , pp. 163
    • Liu, H.1    Cui, P.2    Zhan, K.3    Lin, Q.4    Zhuo, G.5    Guo, X.6    Ding, F.7    Yang, W.8    Liu, D.9    Hu, S.10    Yu, J.11    Zhang, A.12
  • 48
    • 84871895011 scopus 로고    scopus 로고
    • The mitochondrial genome of the lycophyte huperzia squarrosa: The most archaic form in vascular plants
    • Liu Y, Wang B, Cui P, Li L, Xue JY, Yu J, Qiu YL. 2012. The mitochondrial genome of the lycophyte Huperzia squarrosa: The most archaic form in vascular plants. PLoS One 7: e35168.
    • (2012) PLoS One , vol.7
    • Liu, Y.1    Wang, B.2    Cui, P.3    Li, L.4    Xue, J.Y.5    Yu, J.6    Qiu, Y.L.7
  • 49
    • 80053599728 scopus 로고    scopus 로고
    • The mitochondrial genomes of the early land plants treubia lacunosa and anomodon rugelii: Dynamic and conservative evolution
    • Liu Y, Xue JY, Wang B, Li L, Qiu YL. 2011b. The mitochondrial genomes of the early land plants Treubia lacunosa and Anomodon rugelii: Dynamic and conservative evolution. PLoS One 6: e25836.
    • (2011) PLoS One , vol.6
    • Liu, Y.1    Xue, J.Y.2    Wang, B.3    Li, L.4    Qiu, Y.L.5
  • 50
    • 0031789680 scopus 로고    scopus 로고
    • Trans-splicing group II introns in plant mitochondria: The complete set of cis-arranged homologs in ferns, fern allies, and a hornwort
    • Malek O, Knoop V. 1998. Trans-splicing group II introns in plant mitochondria: The complete set of cis-arranged homologs in ferns, fern allies, and a hornwort. RNA 4: 1599-1609.
    • (1998) RNA , vol.4 , pp. 1599-1609
    • Malek, O.1    Knoop, V.2
  • 52
    • 77954693072 scopus 로고    scopus 로고
    • Recombination and the maintenance of plant organelle genome stability
    • Maréchal A, Brisson N. 2010. Recombination and the maintenance of plant organelle genome stability. New Phytologist 186: 299-317.
    • (2010) New Phytologist , vol.186 , pp. 299-317
    • Maréchal, A.1    Brisson, N.2
  • 53
    • 25444502084 scopus 로고    scopus 로고
    • PREP-mt: Predictive RNA editor for plant mitochondrial genes
    • Mower JP. 2005. PREP-Mt: Predictive RNA editor for plant mitochondrial genes. BMC Bioinformatics 6: 96.
    • (2005) BMC Bioinformatics , vol.6 , pp. 96
    • Mower, J.P.1
  • 56
    • 0035854492 scopus 로고    scopus 로고
    • Mitochondrial DNA from the liverwort marchantiapolymorpha: Circularly permuted linear molecules, head-to-tail concatemers, and a 5' protein
    • Oldenburg DJ, Bendich AJ. 2001. Mitochondrial DNA from the liverwort Marchantiapolymorpha: Circularly permuted linear molecules, head-to-tail concatemers, and a 5' protein. Journal of Molecular Biology 310: 549-562.
    • (2001) Journal of Molecular Biology , vol.310 , pp. 549-562
    • Oldenburg, D.J.1    Bendich, A.J.2
  • 57
    • 0026571627 scopus 로고
    • Large size and complex structure of mitochondrial DNA in two nonflowering land plants
    • Palmer JD, Soltis D, Soltis P. 1992. Large size and complex structure of mitochondrial DNA in two nonflowering land plants. Current Genetics 21: 125-129.
    • (1992) Current Genetics , vol.21 , pp. 125-129
    • Palmer, J.D.1    Soltis, D.2    Soltis, P.3
  • 58
    • 0035252353 scopus 로고    scopus 로고
    • Horsetails and ferns are amonophyletic group and the closest living relatives to seed plants
    • Pryer KM, Schneider H, Smith AR, Cranfill R, Wolf PG, Hunt JS, Sipes SD. 2001. Horsetails and ferns are amonophyletic group and the closest living relatives to seed plants. Nature 409: 618-622.
    • (2001) Nature , vol.409 , pp. 618-622
    • Pryer, K.M.1    Schneider, H.2    Smith, A.R.3    Cranfill, R.4    Wolf, P.G.5    Hunt, J.S.6    Sipes, S.D.7
  • 59
    • 3042725361 scopus 로고    scopus 로고
    • Many independent origins of trans splicing of a plant mitochondrial group II intron
    • Qiu YL, Palmer JD. 2004. Many independent origins of trans splicing of a plant mitochondrial group II intron. Journal of Molecular Evolution 59: 80-89.
    • (2004) Journal of Molecular Evolution , vol.59 , pp. 80-89
    • Qiu, Y.L.1    Palmer, J.D.2
  • 60
    • 0032514486 scopus 로고    scopus 로고
    • The gain of three mitochondrial introns identifies liverworts as the earliest land plants
    • Qiu YL, Cho YR, Cox JC, Palmer JD. 1998. The gain of three mitochondrial introns identifies liverworts as the earliest land plants. Nature 394: 671-674.
    • (1998) Nature , vol.394 , pp. 671-674
    • Qiu, Y.L.1    Cho, Y.R.2    Cox, J.C.3    Palmer, J.D.4
  • 62
    • 84874890905 scopus 로고    scopus 로고
    • Horizontal gene transfer in eukaryotes: Fungi-to-plant and plant-to-plant transfers of organellar DNA
    • Dordrecht: Springer
    • Renner SS, Bellot S. 2012. Horizontal gene transfer in eukaryotes: Fungi-to-plant and plant-to-plant transfers of organellar DNA. In: Bock R, Knoop V eds. Genomics of chloroplasts and mitochondria. Dordrecht: Springer. 223-235.
    • (2012) Genomics of Chloroplasts and Mitochondria , pp. 223-235
    • Renner, S.S.1    Bellot, S.2
  • 64
    • 80051801650 scopus 로고    scopus 로고
    • Determination of the melon chloroplast and mitochondrial genome sequences reveals that the largest reported mitochondrial genome in plants contains a significant amount of DNA having a nuclear origin
    • Rodríguez-Moreno L, Gonzalez VM, Benjak A, Martí MC, Puigdomènech P, Aranda MA, Garcia-Mas J. 2011. Determination of the melon chloroplast and mitochondrial genome sequences reveals that the largest reported mitochondrial genome in plants contains a significant amount of DNA having a nuclear origin. BMC Genomics 12: 424.
    • (2011) BMC Genomics , vol.12 , pp. 424
    • Rodríguez-Moreno, L.1    Gonzalez, V.M.2    Benjak, A.3    Martí, M.C.4    Puigdomènech, P.5    Aranda, M.A.6    Garcia-Mas, J.7
  • 65
    • 65349120245 scopus 로고    scopus 로고
    • RNA editing: Only eleven sites are present in the physcomitrella patens mitochondrial transcriptome and a universal nomenclature proposal
    • Rüdinger M, Funk HT, Rensing SA, Maier UG, Knoop V. 2009. RNA editing: Only eleven sites are present in the Physcomitrella patens mitochondrial transcriptome and a universal nomenclature proposal. Molecular Genetics and Genomics 281: 473-481.
    • (2009) Molecular Genetics and Genomics , vol.281 , pp. 473-481
    • Rüdinger, M.1    Funk, H.T.2    Rensing, S.A.3    Maier, U.G.4    Knoop, V.5
  • 66
    • 79960242987 scopus 로고    scopus 로고
    • Assigning DYW-type PPR proteins to RNA editing sites in the funariid mosses physcomitrella patens and funaria hygrometrica
    • Rüdinger M, Szövényi P, Rensing SA, Knoop V. 2011. Assigning DYW-type PPR proteins to RNA editing sites in the funariid mosses Physcomitrella patens and Funaria hygrometrica. Plant Journal 67: 370-380.
    • (2011) Plant Journal , vol.67 , pp. 370-380
    • Rüdinger, M.1    Szövényi, P.2    Rensing, S.A.3    Knoop, V.4
  • 67
    • 84862674523 scopus 로고    scopus 로고
    • Nuclear DYW-type PPR gene families diversify with increasing RNA editing frequencies in liverwort and moss mitochondria
    • Rüdinger M, Volkmar U, Lenz H, Groth-Malonek M, Knoop V. 2012. Nuclear DYW-type PPR gene families diversify with increasing RNA editing frequencies in liverwort and moss mitochondria. Journal of Molecular Evolution 74: 37-51.
    • (2012) Journal of Molecular Evolution , vol.74 , pp. 37-51
    • Rüdinger, M.1    Volkmar, U.2    Lenz, H.3    Groth-Malonek, M.4    Knoop, V.5
  • 68
    • 0025341877 scopus 로고
    • RNA editing in the cytochrome b locus of the higher plant oenothera berteriana includes a U-to-C transition
    • Schuster W, Hiesel R, Wissinger B, Brennicke A. 1990. RNA editing in the cytochrome b locus of the higher plant Oenothera berteriana includes a U-to-C transition. Molecular and Cellular Biology 10: 2428-2431.
    • (1990) Molecular and Cellular Biology , vol.10 , pp. 2428-2431
    • Schuster, W.1    Hiesel, R.2    Wissinger, B.3    Brennicke, A.4
  • 69
    • 84856483430 scopus 로고    scopus 로고
    • Rapid evolution of enormous, multichromosomal genomes in flowering plant mitochondria with exceptionally high mutation rates
    • Sloan DB, Alverson AJ, Chuckalovcak JP, Wu M, McCauley DE, Palmer JD, Taylor DR. 2012. Rapid evolution of enormous, multichromosomal genomes in flowering plant mitochondria with exceptionally high mutation rates. PLoS Biology 10: e1001241.
    • (2012) PLoS Biology , vol.10
    • Sloan, D.B.1    Alverson, A.J.2    Chuckalovcak, J.P.3    Wu, M.4    McCauley, D.E.5    Palmer, J.D.6    Taylor, D.R.7
  • 70
    • 77956455970 scopus 로고    scopus 로고
    • Extensive loss of translational genes in the structurally dynamic mitochondrial genome of the angiosperm silene latifolia
    • Sloan DB, Alverson AJ, Storchova H, Palmer JD, Taylor DR. 2010. Extensive loss of translational genes in the structurally dynamic mitochondrial genome of the angiosperm Silene latifolia. BMC Evolutionary Biology 10: 274.
    • (2010) BMC Evolutionary Biology , vol.10 , pp. 274
    • Sloan, D.B.1    Alverson, A.J.2    Storchova, H.3    Palmer, J.D.4    Taylor, D.R.5
  • 71
    • 84859084955 scopus 로고    scopus 로고
    • PPR2263, a DYW-subgroup pentatricopeptide repeat protein, is required for mitochondrial nad5 and cob transcript editing, mitochondrion biogenesis, and maize growth
    • Sosso D, Mbelo S, Vernoud V, Gendrot G, Dedieu A, Chambrier P, Dauzat M, Heurtevin L, Guyon V, Takenaka M, Rogowsky PM. 2012. PPR2263, a DYW-subgroup pentatricopeptide repeat protein, is required for mitochondrial nad5 and cob transcript editing, mitochondrion biogenesis, and maize growth. Plant Cell 24: 676-691.
    • (2012) Plant Cell , vol.24 , pp. 676-691
    • Sosso, D.1    Mbelo, S.2    Vernoud, V.3    Gendrot, G.4    Dedieu, A.5    Chambrier, P.6    Dauzat, M.7    Heurtevin, L.8    Guyon, V.9    Takenaka, M.10    Rogowsky, P.M.11
  • 72
    • 15044341867 scopus 로고    scopus 로고
    • The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: Comparative analysis of mitochondrial genomes in higher plants
    • Sugiyama Y, Watase Y, Nagase M, Makita N, Yagura S, Hirai A, Sugiura M. 2005. The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: Comparative analysis of mitochondrial genomes in higher plants. Molecular Genetics and Genomics 272: 603-615.
    • (2005) Molecular Genetics and Genomics , vol.272 , pp. 603-615
    • Sugiyama, Y.1    Watase, Y.2    Nagase, M.3    Makita, N.4    Yagura, S.5    Hirai, A.6    Sugiura, M.7
  • 74
    • 0037143760 scopus 로고    scopus 로고
    • The chloroplast and mitochondrial genome sequences of the charophyte chaetosphaeridium globosum: Insights into the timing of the events that restructured organelle DNAs within the green algal lineage that led to land plants
    • Turmel M, Otis C, Lemieux C. 2002. The chloroplast and mitochondrial genome sequences of the charophyte Chaetosphaeridium globosum: Insights into the timing of the events that restructured organelle DNAs within the green algal lineage that led to land plants. Proceedings of the National Academy of Sciences USA 99: 11275-11280.
    • (2002) Proceedings of the National Academy of Sciences USA , vol.99 , pp. 11275-11280
    • Turmel, M.1    Otis, C.2    Lemieux, C.3
  • 75
    • 0042922459 scopus 로고    scopus 로고
    • The mitochondrial genome of chara vulgaris: Insights into the mitochondrial DNA architecture of the last common ancestor of green algae and land plants
    • Turmel M, Otis C, Lemieux C. 2003. The mitochondrial genome of Chara vulgaris: Insights into the mitochondrial DNA architecture of the last common ancestor of green algae and land plants. Plant Cell 15: 1888-1903.
    • (2003) Plant Cell , vol.15 , pp. 1888-1903
    • Turmel, M.1    Otis, C.2    Lemieux, C.3
  • 76
    • 0031053832 scopus 로고    scopus 로고
    • Mitochondrial DNA variations and nuclear RFLPs reflect different genetic similarities among 23 arabidopsis thaliana ecotypes
    • Ullrich H, Lättig K, Brennicke A, Knoop V. 1997. Mitochondrial DNA variations and nuclear RFLPs reflect different genetic similarities among 23 Arabidopsis thaliana ecotypes. Plant Molecular Biology 33: 37-45.
    • (1997) Plant Molecular Biology , vol.33 , pp. 37-45
    • Ullrich, H.1    Lättig, K.2    Brennicke, A.3    Knoop, V.4
  • 77
    • 0032921389 scopus 로고    scopus 로고
    • Phylogenetic information in the mitochondrial nad5 gene of pteridophytes: Rna editing and intron sequences
    • Vangerow S, Teerkorn T, Knoop V. 1999. Phylogenetic information in the mitochondrial nad5 gene of pteridophytes: RNA editing and intron sequences. Plant Biology 1: 235-243.
    • (1999) Plant Biology , vol.1 , pp. 235-243
    • Vangerow, S.1    Teerkorn, T.2    Knoop, V.3
  • 78
    • 46649103236 scopus 로고    scopus 로고
    • Tracing plant mitochondrial DNA evolution: Rearrangements of the ancient mitochondrial gene cluster trnA-trnT - Nad7 in liverwort phylogeny
    • Wahrmund U, Groth-Malonek M, Knoop V. 2008. Tracing plant mitochondrial DNA evolution: Rearrangements of the ancient mitochondrial gene cluster trnA-trnT - nad7 in liverwort phylogeny. Journal of Molecular Evolution 66: 621-629.
    • (2008) Journal of Molecular Evolution , vol.66 , pp. 621-629
    • Wahrmund, U.1    Groth-Malonek, M.2    Knoop, V.3
  • 79
    • 71149092653 scopus 로고    scopus 로고
    • The complete mitochondrial genome sequence of the liverwort pleurozia purpurea reveals extremely conservative mitochondrial genome evolution in liverworts
    • Wang B, Xue J, Li L, Liu Y, Qiu YL. 2009. The complete mitochondrial genome sequence of the liverwort Pleurozia purpurea reveals extremely conservative mitochondrial genome evolution in liverworts. Current Genetics 55: 601-609.
    • (2009) Current Genetics , vol.55 , pp. 601-609
    • Wang, B.1    Xue, J.2    Li, L.3    Liu, Y.4    Qiu, Y.L.5
  • 80
    • 0019441235 scopus 로고
    • The mitochondrial genome is large and variable in a family of plants (Cucurbitaceae)
    • Ward BL, Anderson RS, Bendich AJ. 1981. The mitochondrial genome is large and variable in a family of plants (Cucurbitaceae). Cell 25: 793-803.
    • (1981) Cell , vol.25 , pp. 793-803
    • Ward, B.L.1    Anderson, R.S.2    Bendich, A.J.3
  • 81
    • 80052708667 scopus 로고    scopus 로고
    • Restless 5S: The re-arrangement(s) and evolution of the nuclear ribosomal DNA in land plants
    • Wicke S, Costa A, Muñoz J, Quandt D. 2011a. Restless 5S: The re-arrangement(s) and evolution of the nuclear ribosomal DNA in land plants. Molecular Phylogenetics and Evolution 61: 321-332.
    • (2011) Molecular Phylogenetics and Evolution , vol.61 , pp. 321-332
    • Wicke, S.1    Costa, A.2    Muñoz, J.3    Quandt, D.4
  • 83
    • 23744445592 scopus 로고    scopus 로고
    • Incongruence between primary sequence data and the distribution of a mitochondrial atp1 group II intron among ferns and horsetails
    • Wikström N, Pryer KM. 2005. Incongruence between primary sequence data and the distribution of a mitochondrial atp1 group II intron among ferns and horsetails. Molecular Phylogenetics and Evolution 36: 484-493.
    • (2005) Molecular Phylogenetics and Evolution , vol.36 , pp. 484-493
    • Wikström, N.1    Pryer, K.M.2
  • 84
    • 76549083527 scopus 로고    scopus 로고
    • Heteroplasmy and stoichiometric complexity of plant mitochondrial genomes - Though this be madness, yet there's method in't
    • Woloszynska M. 2010. Heteroplasmy and stoichiometric complexity of plant mitochondrial genomes - though this be madness, yet there's method in't. Journal of Experimental Botany 61: 657-671.
    • (2010) Journal of Experimental Botany , vol.61 , pp. 657-671
    • Woloszynska, M.1
  • 85
    • 75049083803 scopus 로고    scopus 로고
    • The complete mitochondrial genome sequence of the hornwort phaeoceros laevis: Retention of many ancient pseudogenes and conservative evolution of mitochondrial genomes in hornworts
    • Xue JY, Liu Y, Li L, Wang B, Qiu YL. 2010. The complete mitochondrial genome sequence of the hornwort Phaeoceros laevis: Retention of many ancient pseudogenes and conservative evolution of mitochondrial genomes in hornworts. Current Genetics 56: 53-61.
    • (2010) Current Genetics , vol.56 , pp. 53-61
    • Xue, J.Y.1    Liu, Y.2    Li, L.3    Wang, B.4    Qiu, Y.L.5
  • 86
    • 84856082699 scopus 로고    scopus 로고
    • The complete chloroplast and mitochondrial genome sequences of boea hygrometrica: Insights into the evolution of plant organellar genomes
    • Zhang T, Fang Y, Wang X, Deng X, Zhang X, Hu S, Yu J. 2012. The complete chloroplast and mitochondrial genome sequences of Boea hygrometrica: Insights into the evolution of plant organellar genomes. PLoS One 7: e30531.
    • (2012) PLoS One , vol.7
    • Zhang, T.1    Fang, Y.2    Wang, X.3    Deng, X.4    Zhang, X.5    Hu, S.6    Yu, J.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.