-
1
-
-
0037162534
-
Punctuated evolution of mitochondrial gene content: High and variable rates of mitochondrial gene loss and transfer to the nucleus during angio-sperm evolution
-
Adams KL, YL Qiu, M Stoutemyer, JD Palmer 2002 Punctuated evolution of mitochondrial gene content: high and variable rates of mitochondrial gene loss and transfer to the nucleus during angio-sperm evolution. Proc Natl Acad Sci USA 99:9905-9912.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 9905-9912
-
-
Adams, K.L.1
Qiu, Y.L.2
Stoutemyer, M.3
Palmer, J.D.4
-
2
-
-
0033760831
-
Mitochondrial and chloroplast DNA-based phylogeny of Pelargonium (Geraniaceae)
-
Bakker FT, A Culham, CE Pankhurst, M Gibby 2000 Mitochondrial and chloroplast DNA-based phylogeny of Pelargonium (Geraniaceae). Am J Bot 87:727-734.
-
(2000)
Am J Bot
, vol.87
, pp. 727-734
-
-
Bakker, F.T.1
Culham, A.2
Pankhurst, C.E.3
Gibby, M.4
-
3
-
-
0035150954
-
The mitochondrial nad2 gene as a novel marker locus for phylogenetic analysis of early land plants: A comparative analysis in mosses
-
Beckert S, H Muhle, D Pruchner, V Knoop 2001 The mitochondrial nad2 gene as a novel marker locus for phylogenetic analysis of early land plants: a comparative analysis in mosses. Mol Phylogenet Evol 18:117-126.
-
(2001)
Mol Phylogenet Evol
, vol.18
, pp. 117-126
-
-
Beckert, S.1
Muhle, H.2
Pruchner, D.3
Knoop, V.4
-
4
-
-
0033428415
-
A molecular phylogeny of bryophytes based on nucleotide sequences of the mitochondrial nad5 gene
-
Beckert S, S Steinhauser, H Muhle, V Knoop 1999 A molecular phylogeny of bryophytes based on nucleotide sequences of the mitochondrial nad5 gene. Plant Syst Evol 218:179-192.
-
(1999)
Plant Syst Evol
, vol.218
, pp. 179-192
-
-
Beckert, S.1
Steinhauser, S.2
Muhle, H.3
Knoop, V.4
-
5
-
-
0034636023
-
-
Bowe LM, G Coat, CW dePamphilis 2000 Phylogeny of seed plants based on all three genomic compartments: extant gymnosperms are monophyletic and Gnetales' closest relatives are conifers. Proc Natl Acad Sci USA 97:4092-4097.
-
Bowe LM, G Coat, CW dePamphilis 2000 Phylogeny of seed plants based on all three genomic compartments: extant gymnosperms are monophyletic and Gnetales' closest relatives are conifers. Proc Natl Acad Sci USA 97:4092-4097.
-
-
-
-
6
-
-
11144234440
-
Sequence and comparative analysis of the maize NB mitochondrial genome
-
Clifton SW, P Minx, CM Fauron, M Gibson, JO Allen, H Sun, M Thompson, et al 2004 Sequence and comparative analysis of the maize NB mitochondrial genome. Plant Physiol 136:3486-3503.
-
(2004)
Plant Physiol
, vol.136
, pp. 3486-3503
-
-
Clifton, S.W.1
Minx, P.2
Fauron, C.M.3
Gibson, M.4
Allen, J.O.5
Sun, H.6
Thompson, M.7
-
7
-
-
20044382035
-
Evolutionary trends in the simple thalloid liverworts (Marchantiophyta, Jungermanniopsida subclass Metzgeriidae)
-
Crandall-Stotler B, LL Forrest, RE Stotler 2005 Evolutionary trends in the simple thalloid liverworts (Marchantiophyta, Jungermanniopsida subclass Metzgeriidae). Taxon 54:299-316.
-
(2005)
Taxon
, vol.54
, pp. 299-316
-
-
Crandall-Stotler, B.1
Forrest, L.L.2
Stotler, R.E.3
-
8
-
-
0002385504
-
Morphology and classification of the Marchantiophyta
-
AJ Shaw, B Goffinet, eds, biology. Cambridge University Press, Cambridge
-
Crandall-Stotler B, RE Stotler 2000 Morphology and classification of the Marchantiophyta. Pages 21-70 in AJ Shaw, B Goffinet, eds. Bryophyte biology. Cambridge University Press, Cambridge.
-
(2000)
Bryophyte
, pp. 21-70
-
-
Crandall-Stotler, B.1
Stotler, R.E.2
-
9
-
-
27644441993
-
A molecular phylogeny of leafy liverworts (Jungermanniidae: Marchantiophyta)
-
B Goffinet, V Hollowell, R Magill, eds, Missouri Botanical Garden Press, St. Louis
-
Davis EC 2004 A molecular phylogeny of leafy liverworts (Jungermanniidae: Marchantiophyta). Pages 61-86 in B Goffinet, V Hollowell, R Magill, eds. Molecular systematics of bryophytes. Missouri Botanical Garden Press, St. Louis.
-
(2004)
Molecular systematics of bryophytes
, pp. 61-86
-
-
Davis, E.C.1
-
10
-
-
3042698703
-
Distribution of introns in the mitochondrial gene nad1 in land plants: Phylogenetic and molecular evolutionary implications
-
Dombrovska E, YL Qiu 2004 Distribution of introns in the mitochondrial gene nad1 in land plants: phylogenetic and molecular evolutionary implications. Mol Phylogenet Evol 32:246-263.
-
(2004)
Mol Phylogenet Evol
, vol.32
, pp. 246-263
-
-
Dombrovska, E.1
Qiu, Y.L.2
-
11
-
-
0033301420
-
Phylogenetic relationships of land plants using mitochondrial small-subunit rDNA sequences
-
Duff RJ, DL Nickrent 1999 Phylogenetic relationships of land plants using mitochondrial small-subunit rDNA sequences. Am J Bot 86:372-386.
-
(1999)
Am J Bot
, vol.86
, pp. 372-386
-
-
Duff, R.J.1
Nickrent, D.L.2
-
12
-
-
13844255463
-
Progress towards a robust phylogeny for the liverworts, with particular focus on the simple thalloids
-
Forrest LL, BJ Crandall-Stotler 2005 Progress towards a robust phylogeny for the liverworts, with particular focus on the simple thalloids. J Hattori Bot Lab 97:127-159.
-
(2005)
J Hattori Bot Lab
, vol.97
, pp. 127-159
-
-
Forrest, L.L.1
Crandall-Stotler, B.J.2
-
13
-
-
22344453351
-
Systematics of the bryophyta (mosses): From molecules to a revised classification
-
B Goffinet, V Hollowell, R Magill, eds, Missouri Botanical Garden Press, St. Louis
-
Goffinet B, WR Buck 2004 Systematics of the bryophyta (mosses): from molecules to a revised classification. Pages 205-239 in B Goffinet, V Hollowell, R Magill, eds. Molecular systematics of bryophytes. Missouri Botanical Garden Press, St. Louis.
-
(2004)
Molecular systematics of bryophytes
, pp. 205-239
-
-
Goffinet, B.1
Buck, W.R.2
-
14
-
-
10344257212
-
Ancestors of trans-splicing mitochondrial introns support serial sister group relationships of hornworts and mosses to vascular plants
-
Groth-Malonek M, D Pruchner, F Grewe, V Knoop 2005 Ancestors of trans-splicing mitochondrial introns support serial sister group relationships of hornworts and mosses to vascular plants. Mol Biol Evol 22:117-125.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 117-125
-
-
Groth-Malonek, M.1
Pruchner, D.2
Grewe, F.3
Knoop, V.4
-
15
-
-
18244369792
-
Towards a natural classification of liverworts (Marchantiophyta) based on the chloroplast gene rbcL
-
Heinrichs J, SR Gradstein, R Wilson, H Schneider 2005 Towards a natural classification of liverworts (Marchantiophyta) based on the chloroplast gene rbcL. Cryptogam Bryol 26:215-233.
-
(2005)
Cryptogam Bryol
, vol.26
, pp. 215-233
-
-
Heinrichs, J.1
Gradstein, S.R.2
Wilson, R.3
Schneider, H.4
-
16
-
-
33644953310
-
Illuminating the evolutionary history of liverworts (Marchantiophyta): Towards a natural classification
-
He-Nygrén X, A Juslén, I Ahonen, D Glenny, S Piippo 2006 Illuminating the evolutionary history of liverworts (Marchantiophyta): towards a natural classification. Cladistics 22:1-31.
-
(2006)
Cladistics
, vol.22
, pp. 1-31
-
-
He-Nygrén, X.1
Juslén, A.2
Ahonen, I.3
Glenny, D.4
Piippo, S.5
-
17
-
-
4744343662
-
The mitochondrial DNA of land plants: Peculiarities in phylogenetic perspective
-
Knoop V 2004 The mitochondrial DNA of land plants: peculiarities in phylogenetic perspective. Curr Genet 46:123-139.
-
(2004)
Curr Genet
, vol.46
, pp. 123-139
-
-
Knoop, V.1
-
18
-
-
21244454832
-
Molecular phylogeny of bryophytes and peculiarities of their chloroplast and mitochondrial DNAs
-
AJ Wood, MJ Oliver, DJ Cove, eds, Kluwer, Dordrecht
-
Knoop V, YL Qiu, K Yoshinaga 2004 Molecular phylogeny of bryophytes and peculiarities of their chloroplast and mitochondrial DNAs. Pages 1-16 in AJ Wood, MJ Oliver, DJ Cove, eds. New frontiers in bryology: physiology, molecular biology and functional genomics. Kluwer, Dordrecht.
-
(2004)
New frontiers in bryology: Physiology, molecular biology and functional genomics
, pp. 1-16
-
-
Knoop, V.1
Qiu, Y.L.2
Yoshinaga, K.3
-
19
-
-
3242810318
-
MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar S, K Tamura, M Nei 2004 MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5:150-163.
-
(2004)
Brief Bioinform
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
20
-
-
0031027524
-
Evolution of trans-splicing plant mitochondrial introns in pre-Permian times
-
Malek O, A Brennicke, V Knoop 1997 Evolution of trans-splicing plant mitochondrial introns in pre-Permian times. Proc Natl Acad Sci USA 94:553-558.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 553-558
-
-
Malek, O.1
Brennicke, A.2
Knoop, V.3
-
21
-
-
0031789680
-
Trans-splicing group II introns in plant mitochondria: The complete set of cis-arranged homologs in ferns, fern allies, and a hornwort
-
Malek O, V Knoop 1998 Trans-splicing group II introns in plant mitochondria: the complete set of cis-arranged homologs in ferns, fern allies, and a hornwort. RNA 4:1599-1609.
-
(1998)
RNA
, vol.4
, pp. 1599-1609
-
-
Malek, O.1
Knoop, V.2
-
22
-
-
0029863292
-
RNA editing in bryophytes and a molecular phylogeny of land plants
-
Malek O, K Lättig, R Hiesel, A Brennicke, V Knoop 1996 RNA editing in bryophytes and a molecular phylogeny of land plants. EMBO J 15:1403-1411.
-
(1996)
EMBO J
, vol.15
, pp. 1403-1411
-
-
Malek, O.1
Lättig, K.2
Hiesel, R.3
Brennicke, A.4
Knoop, V.5
-
23
-
-
0028985405
-
The rps3-rpl16-nad3-rps12 gene cluster in rice mitochondrial DNA is transcribed from alternative promoters
-
Nakazono M, H Itadani, T Wakasugi, N Tsutsumi, M Sugiura, A Hirai 1995 The rps3-rpl16-nad3-rps12 gene cluster in rice mitochondrial DNA is transcribed from alternative promoters. Curr Genet 27:184-189.
-
(1995)
Curr Genet
, vol.27
, pp. 184-189
-
-
Nakazono, M.1
Itadani, H.2
Wakasugi, T.3
Tsutsumi, N.4
Sugiura, M.5
Hirai, A.6
-
24
-
-
0036861859
-
Molecular data place Hydnoraceae with Aristolochiaceae
-
Nickrent DL, A Blares YL Qiu, DE Soltis, PS Soltis, M Zanis 2002 Molecular data place Hydnoraceae with Aristolochiaceae. Am J Bot 89:1809-1817.
-
(2002)
Am J Bot
, vol.89
, pp. 1809-1817
-
-
Nickrent, D.L.1
Blares YL Qiu, A.2
Soltis, D.E.3
Soltis, P.S.4
Zanis, M.5
-
25
-
-
0027461931
-
-
Nozato N, K Oda, K Yamato, E Ohta, M Takemura, K Akashi, H Fukuzawa, K Ohyama 1993 Cotranscriptional expression of mitochondrial genes for subunits of NADH dehydrogenase, nad5, nad4, nad2, in Marchantia polymorpha. Mol Gen Genet 237:343-350.
-
Nozato N, K Oda, K Yamato, E Ohta, M Takemura, K Akashi, H Fukuzawa, K Ohyama 1993 Cotranscriptional expression of mitochondrial genes for subunits of NADH dehydrogenase, nad5, nad4, nad2, in Marchantia polymorpha. Mol Gen Genet 237:343-350.
-
-
-
-
26
-
-
0026558482
-
Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA: A primitive form of plant mitochondrial genome
-
Oda K, K Yamato, E Ohta, Y Nakamura, M Takemura, N Nozato, K Akashi, et al 1992 Gene organization deduced from the complete sequence of liverwort Marchantia polymorpha mitochondrial DNA: a primitive form of plant mitochondrial genome. J Mol Biol 223:1-7.
-
(1992)
J Mol Biol
, vol.223
, pp. 1-7
-
-
Oda, K.1
Yamato, K.2
Ohta, E.3
Nakamura, Y.4
Takemura, M.5
Nozato, N.6
Akashi, K.7
-
27
-
-
0029861780
-
Evolution of the nad3-rps12 gene cluster in angiosperm mitochondria: Comparison of edited and unedited sequences
-
Pesole G, LR Ceci, C Gissi, C Saccone, C Quagliariello 1996 Evolution of the nad3-rps12 gene cluster in angiosperm mitochondria: comparison of edited and unedited sequences. J Mol Evol 43:447-452.
-
(1996)
J Mol Evol
, vol.43
, pp. 447-452
-
-
Pesole, G.1
Ceci, L.R.2
Gissi, C.3
Saccone, C.4
Quagliariello, C.5
-
28
-
-
0037008837
-
Divergent intron conservation in the mitochondrial nad2 gene: Signatures for the three bryophyte classes (mosses, liverworts, and hornworts) and the lycophyres
-
Pruchner D, S Beckert, H Muhle, V Knoop 2002 Divergent intron conservation in the mitochondrial nad2 gene: signatures for the three bryophyte classes (mosses, liverworts, and hornworts) and the lycophyres. J Mol Evol 55:265-271.
-
(2002)
J Mol Evol
, vol.55
, pp. 265-271
-
-
Pruchner, D.1
Beckert, S.2
Muhle, H.3
Knoop, V.4
-
29
-
-
0035207114
-
Mosses share mitochondrial group II introns with flowering plants, not with liverworts
-
Pruchner D, B Nassal, M Schindler, V Knoop 2001 Mosses share mitochondrial group II introns with flowering plants, not with liverworts. Mol Genet Genom 266:608-613.
-
(2001)
Mol Genet Genom
, vol.266
, pp. 608-613
-
-
Pruchner, D.1
Nassal, B.2
Schindler, M.3
Knoop, V.4
-
30
-
-
0032514486
-
The gain of three mitochondrial introns identifies liverworts as the earliest land plants
-
Qiu YL, YR Cho, JC Cox, JD Palmer 1998 The gain of three mitochondrial introns identifies liverworts as the earliest land plants. Nature 394:671-674.
-
(1998)
Nature
, vol.394
, pp. 671-674
-
-
Qiu, Y.L.1
Cho, Y.R.2
Cox, J.C.3
Palmer, J.D.4
-
31
-
-
33750303564
-
The deepest divergences in land plants inferred from phylogenomic evidence
-
Qiu YL, L Li, B Wang, Z Chen, V Knoop, M Groth-Malonek, O Dombrovska, et al 2006 The deepest divergences in land plants inferred from phylogenomic evidence. Proc Natl Acad Sci USA 103:15511-15516.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 15511-15516
-
-
Qiu, Y.L.1
Li, L.2
Wang, B.3
Chen, Z.4
Knoop, V.5
Groth-Malonek, M.6
Dombrovska, O.7
-
32
-
-
3042725361
-
Many independent origins of trans splicing of a plant mitochondrial group II intron
-
Qiu YL, JD Palmer 2004 Many independent origins of trans splicing of a plant mitochondrial group II intron. J Mol Evol 59:80-89.
-
(2004)
J Mol Evol
, vol.59
, pp. 80-89
-
-
Qiu, Y.L.1
Palmer, J.D.2
-
34
-
-
0041386108
-
MiBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F, JP Huelsenbeck 2003 MiBayes 3: Bayesian phylogenetic inference under mixed models. Bioinfbrmatics 19:1572-1574.
-
(2003)
Bioinfbrmatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
35
-
-
0347419448
-
Transfer of RPS14 and RPL5 from the mitochondrion to the nucleus in grasses
-
Sandoval P, G León, I Gómez, R Carmona, P Figueroa, L Holuigue, A Araya, X Jordana 2004 Transfer of RPS14 and RPL5 from the mitochondrion to the nucleus in grasses. Gene 324:139-147.
-
(2004)
Gene
, vol.324
, pp. 139-147
-
-
Sandoval, P.1
León, G.2
Gómez, I.3
Carmona, R.4
Figueroa, P.5
Holuigue, L.6
Araya, A.7
Jordana, X.8
-
36
-
-
0027423401
-
Ribosomal protein gene rpl5 is cotranscribed with the nad3 gene in Oenothera mitochondria
-
Schuster W 1993 Ribosomal protein gene rpl5 is cotranscribed with the nad3 gene in Oenothera mitochondria. Mol Gen Genet 240:445-449.
-
(1993)
Mol Gen Genet
, vol.240
, pp. 445-449
-
-
Schuster, W.1
-
37
-
-
3042736365
-
The rpl5-rps14 mitochondrial region: A hot spot for DNA rearrangements in Solatnum spp. somatic hybrids
-
Scotti N, L Maréchal-Drouard, T Cardi 2004 The rpl5-rps14 mitochondrial region: a hot spot for DNA rearrangements in Solatnum spp. somatic hybrids. Curr Genet 45:378-382.
-
(2004)
Curr Genet
, vol.45
, pp. 378-382
-
-
Scotti, N.1
Maréchal-Drouard, L.2
Cardi, T.3
-
38
-
-
0242487487
-
Phylogenetic evidence of a rapid radiation of pleurocarpous mosses (Bryophyta)
-
Shaw AJ, CJ Cox, B Goffinet, WR Buck, SB Boles 2003 Phylogenetic evidence of a rapid radiation of pleurocarpous mosses (Bryophyta). Evolution 57:2226-2241.
-
(2003)
Evolution
, vol.57
, pp. 2226-2241
-
-
Shaw, A.J.1
Cox, C.J.2
Goffinet, B.3
Buck, W.R.4
Boles, S.B.5
-
39
-
-
0037143760
-
The chloroplast and mitochondrial genome sequences of the charophyte Chaetosphaeridium globosum: Insights into the timing of the events that restructured organelle DNAs within the green algal lineage that led to land plants
-
Turmel M, C Otis, C Lemieux 2002 The chloroplast and mitochondrial genome sequences of the charophyte Chaetosphaeridium globosum: insights into the timing of the events that restructured organelle DNAs within the green algal lineage that led to land plants. Proc Natl Acad Sci USA 99:11275-11280.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 11275-11280
-
-
Turmel, M.1
Otis, C.2
Lemieux, C.3
-
40
-
-
0042922459
-
The mitochondrial genome of Chara vulgaris: Insights into the mitochondrial DNA architecture of the last common ancestor of green algae and land plants
-
_ 2003 The mitochondrial genome of Chara vulgaris: insights into the mitochondrial DNA architecture of the last common ancestor of green algae and land plants. Plant Cell 15:1888-1903.
-
(2003)
Plant Cell
, vol.15
, pp. 1888-1903
-
-
Turmel, M.1
Otis, C.2
Lemieux, C.3
-
41
-
-
0031053832
-
Mitochondrial DNA variations and nuclear RFLPs reflect different genetic similarities among 23 Arabidopsis thaliana ecotypes
-
Ullrich H, K Lättig, A Brennicke, V Knoop 1997 Mitochondrial DNA variations and nuclear RFLPs reflect different genetic similarities among 23 Arabidopsis thaliana ecotypes. Plant Mol Biol 33:37-45.
-
(1997)
Plant Mol Biol
, vol.33
, pp. 37-45
-
-
Ullrich, H.1
Lättig, K.2
Brennicke, A.3
Knoop, V.4
-
43
-
-
0032921389
-
Phylogenetic information in the mitochondrial nad5 gene of pteridophytes: RNA editing and intron sequences
-
Vangerow S, T Teerkorn, V Knoop 1999 Phylogenetic information in the mitochondrial nad5 gene of pteridophytes: RNA editing and intron sequences. Plant Biol 1:235-243.
-
(1999)
Plant Biol
, vol.1
, pp. 235-243
-
-
Vangerow, S.1
Teerkorn, T.2
Knoop, V.3
|