Differential Metabolite Profiles during Fruit Development in High-Yielding Oil Palm Mesocarp

PLoS ONE

Volumn 8, Issue 4, 2013, Pages

  Teh, Huey Fang ^a   Neoh, Bee Keat ^a   Hong, May Ping Li ^a   Low, Jaime Yoke Sum ^a   Ng, Theresa Lee Mei ^a   Ithnin, Nalisha ^a   Thang, Yin Mee ^a   Mohamed, Mohaimi ^b   Chew, Fook Tim ^c   Yusof, Hirzun Mohd ^a   Kulaveerasingam, Harikrishna ^a   Appleton, David R ^a  

^a UNIVERSITY PUTRA MALAYSIA   (Malaysia)

^b Sime Darby Research Center   (Malaysia)

^c NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; CARBOHYDRATE; CITRIC ACID; FATTY ACID; GLYCEROPHOSPHATE; LIPID; MALIC ACID; NUCLEOSIDE;

AMINO ACID ANALYSIS; ARTICLE; CAPILLARY ELECTROPHORESIS MASS SPECTROMETRY; CARBON UTILIZATION; COMPARATIVE STUDY; CONCENTRATION (PARAMETERS); ELAEIS; FATTY ACID SYNTHESIS; FRUIT (STRUCTURE); FRUIT DEVELOPMENT; GLYCOLYSIS; LIQUID CHROMATOGRAPHY MASS SPECTROMETRY; MASS FRAGMENTOGRAPHY; MASS SPECTROMETRY; MESOCARP; METABOLITE; METABOLOMICS; NONHUMAN;

AMINO ACIDS; ARECACEAE; BIOLOGICAL MARKERS; BREEDING; CHROMATOGRAPHY, LIQUID; CITRIC ACID; FRUIT; GAS CHROMATOGRAPHY-MASS SPECTROMETRY; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE EXPRESSION REGULATION, PLANT; LIPIDS; MALATES; METABOLOMICS; PRINCIPAL COMPONENT ANALYSIS;

ELAEIS;

EID: 84876100957     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0061344     Document Type: Article

References (44)

1. Murphy DJ, (2009) Oil palm: future prospects for yield and quality improvements. Lipid Technology 21: 257-260.
2. Sambanthamurthi R, Sundram K, Tan Y, (2000) Chemistry and biochemistry of palm oil. Prog Lipid Res 39: 507-558.
3. Basiron Y, (2007) Palm oil production through sustainable plantations. European Journal of Lipid Science and Technology 109: 289-295.
4. Matthes M, Singh R, Cheah SC, Karp A, (2001) Variation in oil palm (Elaeis guineensis Jacq.) tissue culture-derived regenerants revealed by AFLPs with methylation-sensitive enzymes. Theoretical and Applied Genetics 102: 971-979.
5. Low ET, Alias H, Boon SH, Shariff EM, Tan CY, et al. (2008) Oil palm (Elaeis guineensis Jacq.) tissue culture ESTs: identifying genes associated with callogenesis and embryogenesis. BMC Plant Biol 8: 62.
6. Mayes S, Jack PL, Corley RH, (2000) The use of molecular markers to investigate the genetic structure of an oil palm breeding programme. Heredity (Edinb) 85 Pt 3: 288-293.
7. Billotte N, Jourjon MF, Marseillac N, Berger A, Flori A, et al. (2010) QTL detection by multi-parent linkage mapping in oil palm (Elaeis guineensis Jacq.). Theoretical and Applied Genetics 120: 1673-1687.
8. Seng TY, Mohamed Saad SH, Chin CW, Ting NC, Harminder Singh RS, et al. (2011) Genetic linkage map of a high yielding FELDA delixyangambi oil palm cross. PLoS One 6: e26593.
9. San CT, Shah FH, (2005) Differential gene expression and characterization of tissue-specific cDNA clones in oil palm using mRNA differential display. Mol Biol Rep 32: 227-235.
10. Hajduch M, Matusova R, Houston NL, Thelen JJ, (2011) Comparative proteomics of seed maturation in oilseeds reveals differences in intermediary metabolism. Proteomics 11: 1619-1629.
11. Troncoso-Ponce MA, Kilaru A, Cao X, Durrett TP, Fan J, et al. (2011) Comparative deep transcriptional profiling of four developing oilseeds. Plant J 68: 1014-1027.
12. Rival A, Jaligot E, (2010) Oil palm biotechnologies are definitely out of infancy. OCL- Oléagineux, Corps Gras, Lipides 17: 368-374.
13. Tran LS, Mochida K, (2010) Functional genomics of soybean for improvement of productivity in adverse conditions. Funct Integr Genomics 10: 447-462.
14. Wu X, Ren C, Joshi T, Vuong T, Xu D, et al. (2010) SNP discovery by high-throughput sequencing in soybean. BMC Genomics 11: 469.
15. Liu P, Wang CM, Li L, Sun F, Liu P, et al. (2011) Mapping QTLs for oil traits and eQTLs for oleosin genes in jatropha. BMC Plant Biol 11: 132.
16. Tranbarger TJ, Dussert S, Joet T, Argout X, Summo M, et al. (2011) Regulatory mechanisms underlying oil palm fruit mesocarp maturation, ripening, and functional specialization in lipid and carotenoid metabolism. Plant Physiol 156: 564-584.
17. Bourgis F, Kilaru A, Cao X, Ngando-Ebongue GF, Drira N, et al. (2011) Comparative transcriptome and metabolite analysis of oil palm and date palm mesocarp that differ dramatically in carbon partitioning. Proc Natl Acad Sci U S A 108: 12527-12532.
18. Fiehn O, Kopka J, Dormann P, Altmann T, Trethewey RN, et al. (2000) Metabolite profiling for plant functional genomics. Nat Biotechnol 18: 1157-1161.
19. Fait A, Hanhineva K, Beleggia R, Dai N, Rogachev I, et al. (2008) Reconfiguration of the achene and receptacle metabolic networks during strawberry fruit development. Plant Physiol 148: 730-750.
20. Osorio S, Alba R, Damasceno CM, Lopez-Casado G, Lohse M, et al. (2011) Systems biology of tomato fruit development: combined transcript, protein, and metabolite analysis of tomato transcription factor (nor, rin) and ethylene receptor (Nr) mutants reveals novel regulatory interactions. Plant Physiol 157: 405-425.
21. Galla G, Barcaccia G, Ramina A, Collani S, Alagna F, et al. (2009) Computational annotation of genes differentially expressed along olive fruit development. BMC Plant Biol 9: 128.
22. Ramli US, Salas JJ, Quant PA, Harwood JL, (2005) Metabolic control analysis reveals an important role for diacylglycerol acyltransferase in olive but not in oil palm lipid accumulation. FEBS J 272: 5764-5770.
23. Schauer N, Fernie AR, (2006) Plant metabolomics: towards biological function and mechanism. Trends Plant Sci 11: 508-516.
24. Devaiah SP, Roth MR, Baughman E, Li M, Tamura P, et al. (2006) Quantitative profiling of polar glycerolipid species from organs of wild-type Arabidopsis and a phospholipase Dalpha1 knockout mutant. Phytochemistry 67: 1907-1924.
25. Soga T, (2007) Capillary electrophoresis-mass spectrometry for metabolomics. Methods Mol Biol 358: 129-137.
26. Okoye MN, Okwuagwu CO, Uguru MI, (2009) Population improvement for Fresh Fruit Bunch Yield and Yield Components in Oil Palm (Elaeis Guineensis Jacq.). Am-Euras J Sci Res 4: 59-63.
27. Maclellan M, (1983) Palm oil. Journal of the American Oil Chemists' Society 60: 368-373.
28. Sambanthamurthi R, Oo K-C, Ong ASH, (1987) Lipid metabolism in oil palm (Elaeis guineensis and Elaeis oleifera) protoplasts. Plant Science 51: 97-103.
29. De Vos RC, Moco S, Lommen A, Keurentjes JJ, Bino RJ, et al. (2007) Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry. Nat Protoc 2: 778-791.
30. Sumner LW, Mendes P, Dixon RA, (2003) Plant metabolomics: large-scale phytochemistry in the functional genomics era. Phytochemistry 62: 817-836.
31. Weselake RJ, Taylor DC, Rahman MH, Shah S, Laroche A, et al. (2009) Increasing the flow of carbon into seed oil. Biotechnol Adv 27: 866-878.
32. Vigeolas H, Geigenberger P, (2004) Increased levels of glycerol-3-phosphate lead to a stimulation of flux into triacylglycerol synthesis after supplying glycerol to developing seeds of Brassica napus L. in planta. Planta 219: 827-835.
33. Vigeolas H, Waldeck P, Zank T, Geigenberger P, (2007) Increasing seed oil content in oil-seed rape (Brassica napus L.) by over-expression of a yeast glycerol-3-phosphate dehydrogenase under the control of a seed-specific promoter. Plant Biotechnol J 5: 431-441.
34. Pleite R, Pike MJ, Garces R, Martinez-Force E, Rawsthorne S, (2005) The sources of carbon and reducing power for fatty acid synthesis in the heterotrophic plastids of developing sunflower (Helianthus annuus L.) embryos. J Exp Bot 56: 1297-1303.
35. Hajduch M, Casteel JE, Tang S, Hearne LB, Knapp S, et al. (2007) Proteomic analysis of near-isogenic sunflower varieties differing in seed oil traits. J Proteome Res 6: 3232-3241.
36. Troncoso-Ponce MA, Garces R, Martinez-Force E, (2010) Glycolytic enzymatic activities in developing seeds involved in the differences between standard and low oil content sunflowers (Helianthus annuus L.). Plant Physiol Biochem 48: 961-965.
37. Donaire JP, Sánchez AJ, López-Gorgé J, Recalde L, (1975) Metabolic changes in fruit and leaf during ripening in the olive. Phytochemistry 14: 1167-1169.
38. Smith RG, Gauthier DA, Dennis DT, Turpin DH, (1992) Malate- and pyruvate-dependent Fatty Acid synthesis in leucoplasts from developing castor endosperm. Plant Physiol 98: 1233-1238.
39. Zrenner R, Stitt M, Sonnewald U, Boldt R, (2006) Pyrimidine and purine biosynthesis and degradation in plants. Annu Rev Plant Biol 57: 805-836.
40. Osuji GO, Brown TK, South SM, (2010) Optimized fat and cellulosic biomass accumulation in peanut through biotechnology. International J of Biotech and Biochem 3: 455-476.
41. Hayden DM, Rolletschek H, Borisjuk L, Corwin J, Kliebenstein DJ, et al. (2011) Cofactome analyses reveal enhanced flux of carbon into oil for potential biofuel production. Plant J 67: 1018-1028.
42. Smirnoff N, Conklin PL, Loewus FA, (2001) Biosynthesis of ascorbic acid in plants: A renaissance. Annu Rev Plant Physiol Plant Mol Biol 52: 437-467.
43. Ooi. TEK., Yeap WC, Daim LDJ, Ng BZ, Lee FC, Othman AM, Appleton DR, Chew FT,.
44. Kulaveerasingam H. Manuscript in preparation.