Normal mode analysis based on an elastic network model for biomolecules in the protein data Bank, which uses dihedral angles as independent variables

Computational Biology and Chemistry

Volumn 44, Issue , 2013, Pages 22-30

  Wako, Hiroshi ^a   Endo, Shigeru ^b  

^a WASEDA UNIVERSITY   (Japan)

^b KITASATO UNIVERSITY   (Japan)

Author keywords

Elastic network model Normal mode analysis Dihedral angle space Protein Data Bank Protein DNA complex Protein tRNA complex

Indexed keywords

ATOMIC FLUCTUATIONS; ELASTIC NETWORK MODELS; INDEPENDENT VARIABLES; NORMAL MODE ANALYSIS; NUMBER OF DEGREES OF FREEDOM; PROTEIN-DNA COMPLEXES; STRUCTURE INFORMATION; TEMPERATURE FACTOR;

ATOMS; BIOMOLECULES; COMPLEX NETWORKS; DATA HANDLING; DATABASE SYSTEMS; DIHEDRAL ANGLE; MOLECULAR STRUCTURE; MOLECULES;

PROTEINS;

DNA; PROTEIN; TRANSFER RNA;

ALGORITHM; ARTICLE; BIOLOGY; CHEMICAL STRUCTURE; CHEMISTRY; ELASTICITY; PROTEIN DATABASE;

ALGORITHMS; COMPUTATIONAL BIOLOGY; DATABASES, PROTEIN; DNA; ELASTICITY; MODELS, MOLECULAR; PROTEINS; RNA, TRANSFER;

EID: 84875720013     PISSN: 14769271     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.compbiolchem.2013.02.006     Document Type: Article

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