-
1
-
-
4444335470
-
The ABC's (and XYZ's) of peptide sequencing
-
DOI 10.1038/nrm1468
-
Steen, H.; Mann, M. The abc's (and xyz's) of Peptide Sequencing Nat. Rev. Mol. Cell. Biol. 2004, 5, 699-711 (Pubitemid 39208180)
-
(2004)
Nature Reviews Molecular Cell Biology
, vol.5
, Issue.9
, pp. 699-711
-
-
Steen, H.1
Mann, M.2
-
2
-
-
84987419408
-
Proposals for a Common Nomenclature for Sequence Ions in Mass Spectra of Peptides
-
Roepstorff, P.; Fohlmann, J. J. Proposals for a Common Nomenclature for Sequence Ions in Mass Spectra of Peptides Biomed. Mass Spectrom. 1984, 11, 601-601
-
(1984)
Biomed. Mass Spectrom.
, vol.11
, pp. 601-601
-
-
Roepstorff, P.1
Fohlmann, J.J.2
-
3
-
-
0023804303
-
Contributions of mass spectrometry to peptide and protein structure
-
Biemann, K. Contributions of Mass Spectrometry to Peptide and Protein Structure Biomed. Environ. Mass Spectrom. 1988, 16, 99-111 (Pubitemid 18265782)
-
(1988)
Biomedical and Environmental Mass Spectrometry
, vol.16
, Issue.1
, pp. 99-111
-
-
Biemann, K.1
-
4
-
-
35848929694
-
Analysis and validation of proteomic data generated by tandem mass spectrometry
-
DOI 10.1038/nmeth1088, PII NMETH1088
-
Nesvizhskii, A. E.; Vitek, O.; Aebersold, R. Analysis and Validation of Proteomic Data Generated by Tandem Mass Spectrometry Nat. Methods 2007, 4, 787-797 (Pubitemid 350055575)
-
(2007)
Nature Methods
, vol.4
, Issue.10
, pp. 787-797
-
-
Nesvizhskii, A.I.1
Vitek, O.2
Aebersold, R.3
-
5
-
-
21844457685
-
Fragmentation Pathways of Protonated Peptides
-
Paizs, B.; Suhai, S. Fragmentation Pathways of Protonated Peptides Mass Spectrom. Rev. 2005, 24, 508-548
-
(2005)
Mass Spectrom. Rev.
, vol.24
, pp. 508-548
-
-
Paizs, B.1
Suhai, S.2
-
6
-
-
29044431915
-
Spectroscopic and theoretical evidence for oxazolone ring formation in collision-induced dissociation of peptides
-
DOI 10.1021/ja056553x
-
Polfer, N. C.; Oomens, J.; Suhai, S.; Paizs, B. Spectroscopic and Theoretical Evidence for Oxazolone Ring Formation in Collision-Induced Dissociation of Peptides J. Am. Chem. Soc. 2005, 127, 17154-17155 (Pubitemid 41791013)
-
(2005)
Journal of the American Chemical Society
, vol.127
, Issue.49
, pp. 17154-17155
-
-
Polfer, N.C.1
Oomens, J.2
Suhai, S.3
Paizs, B.4
-
7
-
-
34248531587
-
Infrared spectroscopy and theoretical studies on gas-phase protonated Leu-enkephalin and its fragments: Direct experimental evidence for the mobile proton
-
DOI 10.1021/ja068014d
-
Polfer, N. C.; Oomens, J.; Suhai, S.; Paizs, B. Infrared Spectroscopy and Theoretical Studies on Gas-Phase Protonated Leu-Enkephalin and Its Fragments: Direct Experimental Evidence for the Mobile Proton J. Am. Chem. Soc. 2007, 129, 5887-5897 (Pubitemid 46748493)
-
(2007)
Journal of the American Chemical Society
, vol.129
, Issue.18
, pp. 5887-5897
-
-
Polfer, N.C.1
Oomens, J.2
Suhai, S.3
Paizs, B.4
-
8
-
-
58149310090
-
+ Ion
-
+ Ion J. Am. Chem. Soc. 2008, 130, 17644-17645
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 17644-17645
-
-
Yoon, S.H.1
Chamot-Rooke, J.2
Perkins, B.R.3
Hilderbrand, A.E.4
Poutsma, J.C.5
Wysocki, V.H.6
-
9
-
-
64749091516
-
Infrared Spectroscopy of Fragments Derived from Tryptic Peptides
-
Bythell, B. J.; Erlekam, U.; Paizs, B.; Maitre, P. Infrared Spectroscopy of Fragments Derived from Tryptic Peptides ChemPhysChem 2009, 10, 883-885
-
(2009)
ChemPhysChem
, vol.10
, pp. 883-885
-
-
Bythell, B.J.1
Erlekam, U.2
Paizs, B.3
Maitre, P.4
-
10
-
-
68849091117
-
5 Ions
-
5 Ions J. Am. Chem. Soc. 2009, 131, 11503-11508
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 11503-11508
-
-
Erlekam, U.1
Bythell, B.J.2
Scuderi, D.3
Van Stipdonk, M.4
Paizs, B.5
Maitre, P.6
-
11
-
-
77949403344
-
1-Protonated 4-Imidazolidinone
-
1-Protonated 4-Imidazolidinone J. Phys. Chem. Lett. 2010, 1, 868-872
-
(2010)
J. Phys. Chem. Lett.
, vol.1
, pp. 868-872
-
-
Verkerk, U.H.1
Siu, C.K.2
Steill, J.D.3
El Aribi, H.4
Zhao, J.F.5
Rodriquez, C.F.6
Oomens, J.7
Hopkinson, A.C.8
Siu, K.W.M.9
-
14
-
-
0002663380
-
Two-colour operation of a Free-Electron Laser and applications in the mid-infrared
-
Prazeres, R.; Glotin, F.; Insa, C.; Jaroszynski, D. A.; Ortega, J. M. Two-Colour Operation of a Free-Electron Laser and Applications in the Mid-Infrared Eur. Phys. J. D 1998, 3, 87-93 (Pubitemid 128687886)
-
(1998)
European Physical Journal D
, vol.3
, Issue.1
, pp. 87-93
-
-
Prazeres, R.1
Glotin, F.2
Insa, C.3
Jaroszynski, D.A.4
Ortega, J.M.5
-
15
-
-
5244348355
-
The Free-Electron-Laser User Facility Felix
-
Oepts, D.; Van der Meer, A. F. G.; Van Amersfoort, P. W. The Free-Electron-Laser User Facility Felix Infrared Phys. Technol. 1995, 36, 297-308
-
(1995)
Infrared Phys. Technol.
, vol.36
, pp. 297-308
-
-
Oepts, D.1
Van Der Meer, A.F.G.2
Van Amersfoort, P.W.3
-
16
-
-
58149324705
-
Why Are b Ions Stable Species in Peptide Mass Spectra?
-
Yalcin, T.; Khouw, C.; Csizmadia, I. G.; Peterson, M. R.; Harrison, A. G. Why Are b Ions Stable Species in Peptide Mass Spectra? J. Am. Soc. Mass Spectrom. 1995, 6, 1165-1174
-
(1995)
J. Am. Soc. Mass Spectrom.
, vol.6
, pp. 1165-1174
-
-
Yalcin, T.1
Khouw, C.2
Csizmadia, I.G.3
Peterson, M.R.4
Harrison, A.G.5
-
18
-
-
72249106400
-
+ Ion
-
+ Ion J. Am. Chem. Soc. 2009, 131, 17528-17529
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 17528-17529
-
-
Perkins, B.1
Chamot-Rooke, J.2
Yoon, S.3
Gucinski, A.4
Somogyi, A.5
Wysocki, V.H.6
-
19
-
-
33747609610
-
Scrambling of sequence information in collision-induced dissociation of peptides
-
DOI 10.1021/ja062440h
-
Harrison, A. G.; Young, A. B.; Bleiholder, C.; Suhai, S.; Paizs, B. Scrambling of Sequence Information in Collision-Induced Dissociation of Peptides J. Am. Chem. Soc. 2006, 128, 10364-10365 (Pubitemid 44265068)
-
(2006)
Journal of the American Chemical Society
, vol.128
, Issue.32
, pp. 10364-10365
-
-
Harrison, A.G.1
Young, A.B.2
Bleiholder, C.3
Suhai, S.4
Paizs, B.5
-
20
-
-
58849144750
-
Sequence-Scrambling Pathways of Protonated Peptides
-
Bleiholder, C.; Osburn, S.; Williams, T. D.; Suhai, S.; Van Stipdonk, M.; Harrison, A. G.; Paizs, B. Sequence-Scrambling Pathways of Protonated Peptides J. Am. Chem. Soc. 2008, 130, 17774-17789
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 17774-17789
-
-
Bleiholder, C.1
Osburn, S.2
Williams, T.D.3
Suhai, S.4
Van Stipdonk, M.5
Harrison, A.G.6
Paizs, B.7
-
21
-
-
0002800119
-
Conformational Landscapes in Amino Acids: Infrared and Ultraviolet Ion-Dip Spectroscopy of Phenylalanine in the Gas Phase
-
Snoek, L. C.; Robertson, E. G.; Kroemer, R. T.; Simons, J. P. Conformational Landscapes in Amino Acids: Infrared and Ultraviolet Ion-Dip Spectroscopy of Phenylalanine in the Gas Phase Chem. Phys. Lett. 2000, 321, 49-56
-
(2000)
Chem. Phys. Lett.
, vol.321
, pp. 49-56
-
-
Snoek, L.C.1
Robertson, E.G.2
Kroemer, R.T.3
Simons, J.P.4
-
22
-
-
0035154882
-
Getting into shape: Conforrmational and supramolecular landscapes in small biomolecules and their hydrated clusters
-
DOI 10.1039/b008225m
-
Robertson, E. G.; Simons, J. P. Getting into Shape: Conformational and Supramolecular Landscapes in Small Biomolecules and Their Hydrated Clusters Phys. Chem. Chem. Phys. 2001, 3, 1-18 (Pubitemid 32064326)
-
(2001)
Physical Chemistry Chemical Physics
, vol.3
, Issue.1
, pp. 1-18
-
-
Robertson, E.G.1
Simons, J.P.2
-
23
-
-
0036249672
-
Structures of the Protected Amino Acid Ac-Phe-OMe and its dimer: A β-sheet Model System in the Gas Phase
-
Gerhards, M.; Unterberg, C. Structures of the Protected Amino Acid Ac-Phe-OMe and its dimer: A β-sheet Model System in the Gas Phase Phys. Chem. Chem. Phys. 2002, 4, 1760-1765
-
(2002)
Phys. Chem. Chem. Phys.
, vol.4
, pp. 1760-1765
-
-
Gerhards, M.1
Unterberg, C.2
-
24
-
-
0038814100
-
Structure of the Protected Dipeptide Ac-Val-Phe-OMe in the Gas Phase: Towards a β-sheet Model System
-
Unterberg, C.; Gerlach, A.; Schrader, T.; Gerhards, M. Structure of the Protected Dipeptide Ac-Val-Phe-OMe in the Gas Phase: Towards a β-sheet Model System J. Chem. Phys. 2003, 118, 8296-8300
-
(2003)
J. Chem. Phys.
, vol.118
, pp. 8296-8300
-
-
Unterberg, C.1
Gerlach, A.2
Schrader, T.3
Gerhards, M.4
-
25
-
-
0035250649
-
Energetics of the Gas Phase Hydrates of Trans-Formanilide: A Microscopic Approach to the Hydration Sites of the Peptide Bond
-
Mons, M.; Dimicoli, I.; Tardivel, B.; Piuzzi, F.; Robertson, E. G.; Simons, J. P. Energetics of the Gas Phase Hydrates of Trans-Formanilide: A Microscopic Approach to the Hydration Sites of the Peptide Bond J. Phys. Chem. A 2001, 105, 969-973
-
(2001)
J. Phys. Chem. A
, vol.105
, pp. 969-973
-
-
Mons, M.1
Dimicoli, I.2
Tardivel, B.3
Piuzzi, F.4
Robertson, E.G.5
Simons, J.P.6
-
26
-
-
79959983571
-
Cold-Ion Spectroscopy Reveals the Intrinsic Structure of a Decapeptide
-
Nagornova, N. S.; Guglielmi, M.; Doemer, M.; Tavernelli, I.; Rothlisberger, U.; Rizzo, T. R.; Boyarkin, O. V. Cold-Ion Spectroscopy Reveals the Intrinsic Structure of a Decapeptide Angew. Chem., Int. Ed. 2011, 50, 5383-5386
-
(2011)
Angew. Chem., Int. Ed.
, vol.50
, pp. 5383-5386
-
-
Nagornova, N.S.1
Guglielmi, M.2
Doemer, M.3
Tavernelli, I.4
Rothlisberger, U.5
Rizzo, T.R.6
Boyarkin, O.V.7
-
27
-
-
84864871571
-
Conformation-Specific Spectroscopy of Peptide Fragment Ions in a Low-Temperature Ion Trap
-
Wassermann, T. N.; Boyarkin, O. V.; Paizs, B.; Rizzo, T. R. Conformation-Specific Spectroscopy of Peptide Fragment Ions in a Low-Temperature Ion Trap J. Am. Soc. Mass Spectrom. 2012, 23, 1029-1045
-
(2012)
J. Am. Soc. Mass Spectrom.
, vol.23
, pp. 1029-1045
-
-
Wassermann, T.N.1
Boyarkin, O.V.2
Paizs, B.3
Rizzo, T.R.4
-
28
-
-
79954992103
-
2-Tagged, Mass-Selected Ions
-
2-Tagged, Mass-Selected Ions J. Am. Chem. Soc. 2011, 133, 6440-6448
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 6440-6448
-
-
Kamrath, M.Z.1
Garand, E.2
Jordan, P.A.3
Leavitt, C.M.4
Wolk, A.B.5
Van Stipdonk, M.J.6
Miller, S.J.7
Johnson, M.A.8
-
29
-
-
80052685169
-
2 Peptide Fragment Ions Using IRMPD in the X-H (X = O, N, and C) Stretching Region
-
2 Peptide Fragment Ions Using IRMPD in the X-H (X = O, N, and C) Stretching Region J. Am. Soc. Mass Spectrom. 2011, 22, 1645-1650
-
(2011)
J. Am. Soc. Mass Spectrom.
, vol.22
, pp. 1645-1650
-
-
Sinha, R.K.1
Erlekam, U.2
Bythell, B.J.3
Paizs, B.4
Maiître, P.5
-
30
-
-
38349174368
-
Gas-Phase Structure of a π-Allyl-Palladium Complex: Efficient Infrared Spectroscopy in a 7 T Fourier Transform Mass Spectrometer
-
Bakker, J. M.; Besson, T.; Lemaire, J.; Scuderi, D.; Maitre, P. Gas-Phase Structure of a π-Allyl-Palladium Complex: Efficient Infrared Spectroscopy in a 7 T Fourier Transform Mass Spectrometer J. Phys. Chem. A 2007, 111, 13415-13424
-
(2007)
J. Phys. Chem. A
, vol.111
, pp. 13415-13424
-
-
Bakker, J.M.1
Besson, T.2
Lemaire, J.3
Scuderi, D.4
Maitre, P.5
-
31
-
-
57949083416
-
Tautomerism of Uracil Probed via Infrared Spectroscopy of Singly Hydrated Protonated Uracil
-
Bakker, J. M.; Sinha, R. K.; Besson, T.; Brugnara, M.; Tosi, P.; Salpin, J. Y.; Maitre, P. Tautomerism of Uracil Probed via Infrared Spectroscopy of Singly Hydrated Protonated Uracil J. Phys. Chem. A 2008, 112, 12393-12400
-
(2008)
J. Phys. Chem. A
, vol.112
, pp. 12393-12400
-
-
Bakker, J.M.1
Sinha, R.K.2
Besson, T.3
Brugnara, M.4
Tosi, P.5
Salpin, J.Y.6
Maitre, P.7
-
33
-
-
0011629671
-
n (n = 1, 2, 3)
-
n (n = 1, 2, 3) J. Chem. Phys. 1989, 91, 7319-7330
-
(1989)
J. Chem. Phys.
, vol.91
, pp. 7319-7330
-
-
Yeh, L.I.1
Okumura, M.2
Myers, J.D.3
Price, J.M.4
Lee, Y.T.5
-
34
-
-
0000892210
-
Infrared Multiple Photon Dissociation Spectra of Gaseous Ions
-
Peiris, D. M.; Cheeseman, M. A.; Ramanathan, R.; Eyler, J. R. Infrared Multiple Photon Dissociation Spectra of Gaseous Ions J. Phys. Chem. 1993, 97, 7839-7843
-
(1993)
J. Phys. Chem.
, vol.97
, pp. 7839-7843
-
-
Peiris, D.M.1
Cheeseman, M.A.2
Ramanathan, R.3
Eyler, J.R.4
-
35
-
-
61749089010
-
Spectroscopy of Protonated Peptides Assisted by Infrared Multiple Photon Excitation
-
Guidi, M.; Lorenz, U. J.; Papadopoulos, G.; Boyarkin, O. V.; Rizzo, T. R. Spectroscopy of Protonated Peptides Assisted by Infrared Multiple Photon Excitation J. Phys. Chem. A 2009, 113, 797-799
-
(2009)
J. Phys. Chem. A
, vol.113
, pp. 797-799
-
-
Guidi, M.1
Lorenz, U.J.2
Papadopoulos, G.3
Boyarkin, O.V.4
Rizzo, T.R.5
-
36
-
-
0038626673
-
-
Revision C.02; Gaussian, Inc. Wallingford, CT, See Supporting Information for full reference
-
Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J. R.; Montgomery, J. A.; Vreven, Jr., T.; Kudin, K. N.; Burant, J. C.; Gaussian 03, Revision C.02; Gaussian, Inc.: Wallingford, CT, 2004. See Supporting Information for full reference.
-
(2004)
Gaussian 03
-
-
Frisch, M.J.1
Trucks, G.W.2
Schlegel, H.B.3
Scuseria, G.E.4
Robb, M.A.5
Cheeseman, J.R.6
Montgomery, J.A.7
Vreven, Jr.T.8
Kudin, K.N.9
Burant, J.C.10
-
37
-
-
77951098781
-
+ from Protonated Tetraglcine Revealed by Tandem Mass Spectrometry and IRMPD Spectroscopy
-
+ from Protonated Tetraglcine Revealed by Tandem Mass Spectrometry and IRMPD Spectroscopy J. Phys. Chem. A 2010, 114, 5076-5082
-
(2010)
J. Phys. Chem. A
, vol.114
, pp. 5076-5082
-
-
Bythell, B.J.1
Dain, R.P.2
Curtice, S.S.3
Oomens, J.4
Steill, J.D.5
Groenewold, G.S.6
Paizs, B.7
Van Stipdonk, M.8
-
38
-
-
56949092470
-
3 Ions Rarely Observed?
-
3 Ions Rarely Observed? J. Am. Soc. Mass Spectrom. 2008, 19, 1764-1770
-
(2008)
J. Am. Soc. Mass Spectrom.
, vol.19
, pp. 1764-1770
-
-
Allen, J.M.1
Racine, A.H.2
Berman, A.M.3
Johnson, J.S.4
Bythell, B.J.5
Paizs, B.6
Glish, G.L.7
-
39
-
-
80755169534
-
2 Predissociation Spectroscopy
-
2 Predissociation Spectroscopy J. Am. Soc. Mass Spectrom. 2011, 22, 1941-1952
-
(2011)
J. Am. Soc. Mass Spectrom.
, vol.22
, pp. 1941-1952
-
-
Leavitt, C.M.1
Wolk, A.B.2
Kamrath, M.Z.3
Garand, E.4
Van Stipdonk, J.5
Johnson, M.A.6
-
40
-
-
34247356978
-
Quantum structure of the intermolecular proton bond
-
DOI 10.1126/science.1138962
-
Roscioli, J. R.; McCunn, L. R.; Johnson, M. A. Quantum Structure of the Intermolecular Proton Bond Science 2007, 316, 249-254 (Pubitemid 46633097)
-
(2007)
Science
, vol.316
, Issue.5822
, pp. 249-254
-
-
Roscioli, J.R.1
McCunn, L.R.2
Johnson, M.A.3
|