Vibrational characterization of simple peptides using cryogenic infrared photodissociation of H2-tagged, mass-selected ions

Journal of the American Chemical Society

Volumn 133, Issue 16, 2011, Pages 6440-6448

  Kamrath, Michael Z ^a   Garand, Etienne ^a   Jordan, Peter A ^a   Leavitt, Christopher M ^a   Wolk, Arron B ^a   Van Stipdonk, Michael J ^b   Miller, Scott J ^a   Johnson, Mark A ^a  

^a YALE UNIVERSITY   (United States)

^b WICHITA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BAND PATTERNS; C-O STRETCH; C-O STRETCHING; CHEMICAL ENVIRONMENT; COMPLEX SPECTRUM; ENERGY RANGES; HIGH DENSITY; INFRARED PHOTODISSOCIATION; ISOMERIC FORMS; ONE PHOTON ABSORPTION; PROTONATED PEPTIDES; QUADRUPOLE ION TRAPS; ROOM TEMPERATURE; SITE-SPECIFICITY; TABLETOP LASERS; TRIPEPTIDE; VIBRATIONAL STATE;

CHEMICAL REACTIONS; MULTIPHOTON PROCESSES; PEPTIDES; PHOTODISSOCIATION;

IONS;

CARBON 13; HYDROGEN; ION; PEPTIDE;

ARTICLE; CRYOGENIC INFRARED PHOTODISSOCIATION; HYDROGEN BOND; ISOMER; PROTON TRANSPORT; SPECTROSCOPY; SYNTHESIS; ULTRAVIOLET RADIATION; VIBRATION;

HYDROGEN; MASS SPECTROMETRY; PEPTIDES; PHOTOCHEMISTRY; SPECTROPHOTOMETRY, INFRARED; VIBRATION;

EID: 79954992103     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja200849g     Document Type: Article

References (58)

1. Oomens, J.; Steill, J. D. J. Am. Soc. Mass Spectrom. 2010, 21, 698-706
2. Bythell, B. J.; Dain, R. P.; Curtice, S. S.; Oomens, J.; Steill, J. D.; Groenewold, G. S.; Paizs, B.; Stipdonk, M. J. V. J. Phys. Chem. A. 2010, 114, 5076-5082
3. Kupser, P.; Pagel, K.; Oomens, J.; Polfer, N.; Koksch, B.; Meijer, G.; von Helden, G. J. Am. Chem. Soc. 2010, 132, 2085-2093
4. Chen, X.; Yu, L.; Steill, J. D.; Oomens, J.; Polfer, N. C. J. Am. Chem. Soc. 2009, 131, 18272-18282
5. Polfer, N. C.; Oomens, J. Mass Spec. Rev. 2009, 28, 468-494
6. Oomens, J.; Tielens, A. G. G. M.; Sartakov, B. G.; vonHelden, G.; Meijer, G. Astrophys. J. 2003, 591, 968-985
7. Polfer, N. C.; Oomens, J.; Suhai, S.; Paizs, B. J. Am. Chem. Soc. 2007, 129, 5887-5897
8. Price, W. D.; Schnier, P. D.; Williams, E. R. J. Phys. Chem. B 1997, 101, 664-673
9. Rajabi, K.; Fridgen, T. D. J. Phys. Chem. A 2008, 112, 23-30
10. Van Stipdonk, M. J.; Kerstetter, D. R.; Leavitt, C. M.; Groenewold, G. S.; Steill, J.; Oomens, J. Phys. Chem. Chem. Phys. 2008, 10, 3209-3221
11. Molesworth, S.; Leavitt, C. M.; Groenewold, G. S.; Oomens, J.; Steill, J. D.; van Stipdonk, M. J. Am. Soc. Mass Spectrom. 2009, 20, 1841-1845
12. Polfer, N. C.; Oomens, J.; Moore, D. T.; von Helden, G.; Meijer, G.; Dunbar, R. C. J. Am. Chem. Soc. 2006, 128, 517-525
13. Armentrout, P. B.; Rodgers, M. T.; Oomens, J.; Steill, J. D. J. Phys. Chem. A 2008, 112, 2248-2257
14. Rodgers, M. T.; Armentrout, P. B.; Oomens, J.; Steill, J. D. J. Phys. Chem. A 2008, 112, 2258-2267
15. Leavitt, C. M.; Oomens, J.; Dain, R. P.; Steill, J.; Groenewold, G. S.; Stipdonk, M. J. V. J. Am. Soc. Mass Spectrom. 2009, 20, 772-782
16. -1, but accessing other spectral regions requires adjustment of optical configurations, and facilities often service the needs of most users, which lie in the fingerprint region.
17. Li, X. H., Oomens, J., Eyler, J. R., Moore, D. T., and Iyengar, S. S. J. Chem. Phys. 2010, 132 (24 244301
18. Nagornova, N. S., Rizzo, T. R., and Boyarkin, O. V. J. Am. Chem. Soc. 2010, 132, 4040 - 4041.
19. Rizzo, T. R.; Stearns, J. A.; Boyarkin, O. V. Int. Rev. Phys. Chem. 2009, 28, 481-515
20. Guidi, M.; Lorenz, U. J.; Papadopoulos, G.; Boyarkin, O. V.; Rizzo, T. R. J. Phys. Chem. A 2009, 113, 797-799
21. Stearns, J. A.; Mercier, S.; Seaiby, C.; Guidi, M.; Boyarkin, O. V.; Rizzo, T. R. J. Am. Chem. Soc. 2007, 129, 11814-11820
22. Stearns, J. A.; Seaiby, C.; Boyarkin, O. V.; Rizzo, T. R. Phys. Chem. Chem. Phys. 2009, 11, 125-132
23. Stearns, J. A.; Boyarkin, O. V.; Rizzo, T. R. Chimia 2008, 62, 240-243
24. Goebbert, D. J.; Wende, T.; Bergmann, R.; Meijer, G.; Asmis, K. R. J. Phys. Chem. A 2009, 113, 5874-5880
25. Brummer, M.; Kaposta, C.; Santambrogio, G.; Asmis, K. R. J. Chem. Phys. 2003, 119, 12700-12703
26. Jiang, L.; Wende, T.; Bergmann, R.; Meijer, G.; Asmis, K. R. J. Am. Chem. Soc. 2010, 132, 7398-7404
27. Wang, X. B. and Wang, L. S. Rev. Sci. Instrum. 2008, 79 073108
28. Wang, X. B.; Xing, X. P.; Wang, L. S. J. Phys. Chem. A 2008, 112, 13271-13274
29. Gustafson, J. L.; Lim, D.; Miller, S. J. Science 2010, 328, 1251-1255
30. Kamrath, M. Z., Relph, R. A., Guasco, T. L., Leavitt, C. M., and Johnson, M. A. Int. J. Mass Spec. 2011, 300, 91-98
31. OConnor, P. B.; Costello, C. E.; Earle, W. E. J. Am. Soc. Mass Spectrom. 2002, 13, 1370-1375
32. Mathur, R.; OConnor, P. B. Rev. Sci. Instrum. 2006, 77, 114101
33. Frisch, M. J.; Gaussian, Inc.: Wallingford, CT, 2009.
34. Stryer, L. Biochemistry, Third ed.; W. H. Freeman and Company: New York, 1988.
35. Wu, R. H.; McMahon, T. B. J. Phys. Chem. B 2009, 113, 8767-8775
36. Wu, R. H.; McMahon, T. B. ChemPhysChem 2008, 9, 2826-2835
37. Alexander, M. L.; Johnson, M. A.; Lineberger, W. C. J. Chem. Phys. 1985, 82, 5288-5289
38. Alexander, M. L.; Johnson, M. A.; Levinger, N. E.; Lineberger, W. C. Phys. Rev. Lett. 1986, 57, 976
39. Campagnola, P. J.; Posey, L. A.; Johnson, M. A. J. Chem. Phys. 1991, 95, 7998-8004
40. Lide, D. R., Ed.; CRC Handbook of Chemistry and Physics, 76 th ed.; CRC Press: New York, 1995.
41. Robertson, W. H.; Kelley, J. A.; Johnson, M. A. Rev. Sci. Instrum. 2000, 71, 4431-4434
42. McCunn, L. R.; Headrick, J.; Johnson, M. A. Phys. Chem. Chem. Phys. 2008, 10, 3118-3123
43. Zhao, Y. X.; Yourshaw, I.; Reiser, G.; Arnold, C. C.; Neumark, D. M. J. Chem. Phys. 1994, 101, 6538-6551
44. Klots, C. E. J. Chem. Phys. 1985, 83, 5854-5860
45. Klots, C. E. Z. Phys. D: At., Mol. Clusters 1987, 5, 83-89
46. Klots, C. E. J. Phys. Chem. 1988, 92, 5864-5868
47. Engelking, P. C. J. Chem. Phys. 1986, 85, 3103
48. Huber, K. P.; Herzberg, G. Molecular Spectra and Molecular Structure: IV. Constants of Diatomic Molecules; Van Nostrand Reinhold Company: New York, 1979.
49. Levine, I. Quantum Chemistry, Sixth ed.; Pearson Prentice Hall: Upper Saddle River, NJ, 2009.
50. Johnson, E. R.; DiLabio, G. A. Chem. Phys. Lett. 2006, 419, 333-339
51. Okumura, M.; Yeh, L. I.; Lee, Y. T. J. Chem. Phys. 1988, 88, 79-91
52. Okumura, M.; Yeh, L. I.; Myers, J. D.; Lee, Y. T. J. Phys. Chem. 1990, 94, 3416-3427
53. Hirao, K.; Yamabe, S. Chem. Phys. 1983, 80, 237-243
54. Boys, S. F.; Bernardi, F. Mol. Phys. 1970, 19, 553-566
55. Roscioli, J. R.; McCunn, L. R.; Johnson, M. A. Science 2007, 316, 249-254
56. Gardner, R. R.; Liang, G.-B.; Gellman, S. H. J. Am. Chem. Soc. 1995, 117, 3280-3281
57. Rao, C. P.; Nagaraj, R.; Rao, C. N. R.; Balaram, P. Biochemistry 1980, 19, 425-431
58. Lin, Y. S.; Shorb, J. M.; Mukherjee, P.; Zanni, M. T.; Skinner, J. L. J. Phys. Chem. B 2009, 113, 592-602