메뉴 건너뛰기




Volumn 8, Issue 4, 2013, Pages

Genome Characterisation of Enteroviruses 117 and 118: A New Group within Human Enterovirus Species C

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN VP1;

EID: 84875655326     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0060641     Document Type: Article
Times cited : (14)

References (38)
  • 1
    • 34447577520 scopus 로고    scopus 로고
    • Enteroviruses: polioviruses, coxsackieviruses, echoviruses, and new enteroviruses
    • In: Kinpe DM, Howley PM, editors Philadelphia: Lippincott, Williams & Wilkins
    • Pallansch MA, Roose R (2007) Enteroviruses: polioviruses, coxsackieviruses, echoviruses, and new enteroviruses. In: Kinpe DM, Howley PM, editors.Fields virology.Philadelphia: Lippincott, Williams & Wilkins. Pp. 839-893.
    • (2007) Fields virology , pp. 839-893
    • Pallansch, M.A.1    Roose, R.2
  • 2
    • 34547753377 scopus 로고    scopus 로고
    • Chapter 24: Picornaviridae: The viruses and their replication
    • Kinpe DM, Howley PM, editors Philadelphia: Lippincott, Williams & Wilkins
    • Rancariello V (2007) Chapter 24: Picornaviridae: The viruses and their replication. Kinpe DM, Howley PM, editors. Fields virology.Philadelphia: Lippincott, Williams & Wilkins. Pp. 795-839.
    • (2007) Fields virology , pp. 795-839
    • Rancariello, V.1
  • 4
    • 0033020133 scopus 로고    scopus 로고
    • Molecular evolution of the human enteroviruses: correlation of serotype with VP1 sequence and application to picornavirus classification
    • Oberste MS, Maher K, Kilpatrick DR, Pallansch MA, (1999) Molecular evolution of the human enteroviruses: correlation of serotype with VP1 sequence and application to picornavirus classification. J Virol 73: 1941-1948.
    • (1999) J Virol , vol.73 , pp. 1941-1948
    • Oberste, M.S.1    Maher, K.2    Kilpatrick, D.R.3    Pallansch, M.A.4
  • 5
    • 66149120237 scopus 로고    scopus 로고
    • New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses
    • Tapparel C, Junier T, Gerlach D, Van-Belle S, Turin L, et al. (2009) New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses. Emerg Infect Dis 15: 719-726.
    • (2009) Emerg Infect Dis , vol.15 , pp. 719-726
    • Tapparel, C.1    Junier, T.2    Gerlach, D.3    Van-Belle, S.4    Turin, L.5
  • 6
    • 77956028248 scopus 로고    scopus 로고
    • Human Enterovirus 109: a novel interspecies recombinant enterovirus isolated from a case of acute pediatric respiratory illness in Nicaragua
    • Yozwiak N, Skewes-Cox P, Gordon A, Saborio S, Kuan G, et al. (2010) Human Enterovirus 109: a novel interspecies recombinant enterovirus isolated from a case of acute pediatric respiratory illness in Nicaragua. J Virol 84: 9047-9058.
    • (2010) J Virol , vol.84 , pp. 9047-9058
    • Yozwiak, N.1    Skewes-Cox, P.2    Gordon, A.3    Saborio, S.4    Kuan, G.5
  • 7
    • 77952681818 scopus 로고    scopus 로고
    • Enterovirus genotype EV-104 in humans, Italy, 2008-2009
    • Piralla A, Rovida F, Baldanti F, Gerna G, (2010) Enterovirus genotype EV-104 in humans, Italy, 2008-2009. Emerg Infect Dis 16: 1018-1021.
    • (2010) Emerg Infect Dis , vol.16 , pp. 1018-1021
    • Piralla, A.1    Rovida, F.2    Baldanti, F.3    Gerna, G.4
  • 9
    • 85045352142 scopus 로고    scopus 로고
    • Type 1 wild poliovirus and putative enterovirus 109 in an outbreak of acute flaccid paralysis in Congo, October-November 2010
    • doi:pii:19723
    • Grard G, Drextler JF, Lekana-Douki S, Caron M, Lukashev A, et al. (2010) Type 1 wild poliovirus and putative enterovirus 109 in an outbreak of acute flaccid paralysis in Congo, October-November 2010. Euro Surveill 15. doi:pii:19723.
    • (2010) Euro Surveill , vol.15
    • Grard, G.1    Drextler, J.F.2    Lekana-Douki, S.3    Caron, M.4    Lukashev, A.5
  • 11
    • 84865652987 scopus 로고    scopus 로고
    • Epidemiological, molecular and clinical features of Enterovirus 109 infection in children and in adult stem cell transplant recipients
    • Debiaggi M, Ceresola ER, Sampaolo M, Alessandrino EP, Brerra R, et al. (2012) Epidemiological, molecular and clinical features of Enterovirus 109 infection in children and in adult stem cell transplant recipients. Virol J 9: 183.
    • (2012) Virol J , vol.9 , pp. 183
    • Debiaggi, M.1    Ceresola, E.R.2    Sampaolo, M.3    Alessandrino, E.P.4    Brerra, R.5
  • 12
    • 84867568825 scopus 로고    scopus 로고
    • Novel serotypes 105 and 116 are members of distinct subgroups of Human enterovirus C
    • Lukashev AN, Drexler JF, Kotova VO, Amjaga EN, Reznik VI, et al. (2012) Novel serotypes 105 and 116 are members of distinct subgroups of Human enterovirus C. J Gen Virol93: 2357-2362.
    • (2012) J Gen Virol , vol.93 , pp. 2357-2362
    • Lukashev, A.N.1    Drexler, J.F.2    Kotova, V.O.3    Amjaga, E.N.4    Reznik, V.I.5
  • 13
    • 84871293605 scopus 로고    scopus 로고
    • Genomic analysis of two novel human enterovirus C genotypes found in respiratory samples from Perù
    • Tokarz R, Hirschberg DL, Sameroff S, Haq S, Luna G, et al. (2012) Genomic analysis of two novel human enterovirus C genotypes found in respiratory samples from Perù. J Gen VirolEpub Oct 3.
    • (2012) J Gen Virol
    • Tokarz, R.1    Hirschberg, D.L.2    Sameroff, S.3    Haq, S.4    Luna, G.5
  • 14
    • 84868275395 scopus 로고    scopus 로고
    • Complete genome sequence of a novel human enterovirus C (HEV-C117) identified in a child with community-acquired pneumonia
    • Daleno C, Piralla A, Scala A, Baldanti F, Usonis V, et al. (2012) Complete genome sequence of a novel human enterovirus C (HEV-C117) identified in a child with community-acquired pneumonia. J Virol 86: 10888-10889.
    • (2012) J Virol , vol.86 , pp. 10888-10889
    • Daleno, C.1    Piralla, A.2    Scala, A.3    Baldanti, F.4    Usonis, V.5
  • 15
    • 84867854277 scopus 로고    scopus 로고
    • Novel human Enterovirus C infection in child with community-acquired pneumonia
    • Daleno C, Piralla A, Usonis V, Scala A, Ivaskevicius R, et al. (2012) Novel human Enterovirus C infection in child with community-acquired pneumonia. Emerg Infect Dis 18: 1913-1915.
    • (2012) Emerg Infect Dis , vol.18 , pp. 1913-1915
    • Daleno, C.1    Piralla, A.2    Usonis, V.3    Scala, A.4    Ivaskevicius, R.5
  • 16
    • 84872397868 scopus 로고    scopus 로고
    • A novel human enterovirus C (EV-C118) indentified in two children hospitalised because of acute otitis media and community-acquired pneumonia in Israel
    • Daleno C, Greenberg D, Piralla A, Scala A, Baldanti F, et al. (2013) A novel human enterovirus C (EV-C118) indentified in two children hospitalised because of acute otitis media and community-acquired pneumonia in Israel. J Clin Virol 56: 159-163.
    • (2013) J Clin Virol , vol.56 , pp. 159-163
    • Daleno, C.1    Greenberg, D.2    Piralla, A.3    Scala, A.4    Baldanti, F.5
  • 17
    • 84995961506 scopus 로고    scopus 로고
    • Full genome sequence of a novel human enterovirus C (HEV-C118) isolated from two children with acute otitis media and community-acquired pneumonia in Israel
    • doi:pii: e00121-12
    • Daleno C, Piralla A, Scala A, Baldanti F, Greenberg D, et al. (2013) Full genome sequence of a novel human enterovirus C (HEV-C118) isolated from two children with acute otitis media and community-acquired pneumonia in Israel. Genome Announc 1doi:pii: e00121-12.
    • (2013) Genome Announc , vol.1
    • Daleno, C.1    Piralla, A.2    Scala, A.3    Baldanti, F.4    Greenberg, D.5
  • 18
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, et al. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 2731-2739.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5
  • 19
    • 0032889281 scopus 로고    scopus 로고
    • Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination
    • Lole KS, Bollinger RC, Paranjape RS, Gadkari D, Kulkarni SS, et al. (1999) Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. J Virol 73: 152-160.
    • (1999) J Virol , vol.73 , pp. 152-160
    • Lole, K.S.1    Bollinger, R.C.2    Paranjape, R.S.3    Gadkari, D.4    Kulkarni, S.S.5
  • 20
    • 36549056971 scopus 로고    scopus 로고
    • RNA consensus structure prediction with RNaminoifold
    • Hofacker IL, (2007) RNA consensus structure prediction with RNaminoifold. Methods Mol Biol 395: 527-544.
    • (2007) Methods Mol Biol , vol.395 , pp. 527-544
    • Hofacker, I.L.1
  • 21
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M, (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31: 3406-3415.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3406-3415
    • Zuker, M.1
  • 22
    • 48449106792 scopus 로고    scopus 로고
    • The Jpred 3 secondary structure prediction server
    • Cole C, Barber JD, Barton GJ, (2008) The Jpred 3 secondary structure prediction server. Nucl Acids Res 36: W197-W201.
    • (2008) Nucl Acids Res , vol.36
    • Cole, C.1    Barber, J.D.2    Barton, G.J.3
  • 23
    • 84861189816 scopus 로고    scopus 로고
    • Human rhinovirus and human respiratory enterovirus (EV68 and EV104) infections in hospitalized patients in Italy, 2008-2009
    • Piralla A, Lilleri D, Sarasini A, Marchi A, Zecca M, et al. (2012) Human rhinovirus and human respiratory enterovirus (EV68 and EV104) infections in hospitalized patients in Italy, 2008-2009. Diagn Microb Infect Dis 73: 162-167.
    • (2012) Diagn Microb Infect Dis , vol.73 , pp. 162-167
    • Piralla, A.1    Lilleri, D.2    Sarasini, A.3    Marchi, A.4    Zecca, M.5
  • 24
    • 84865111474 scopus 로고    scopus 로고
    • Worldwide emergence of multiple clades of enterovirus 68
    • Tokarz R, Firth C, Madhi SA, Howie SR, Wu W, et al. (2012) Worldwide emergence of multiple clades of enterovirus 68. J Gen Virol93: 1952-1958.
    • (2012) J Gen Virol , vol.93 , pp. 1952-1958
    • Tokarz, R.1    Firth, C.2    Madhi, S.A.3    Howie, S.R.4    Wu, W.5
  • 25
    • 84855347917 scopus 로고    scopus 로고
    • Emergence and epidemic occurrence of enterovirus 68 respiratory infections in The Netherlands in 2010
    • Meijer A, van der Sanden S, Snijders BE, Jaramillo-Gutierrez G, Bont L, et al. (2012) Emergence and epidemic occurrence of enterovirus 68 respiratory infections in The Netherlands in 2010. Virology 423: 49-57.
    • (2012) Virology , vol.423 , pp. 49-57
    • Meijer, A.1    van der Sanden, S.2    Snijders, B.E.3    Jaramillo-Gutierrez, G.4    Bont, L.5
  • 26
    • 84858202985 scopus 로고    scopus 로고
    • Acute respiratory infections due to enterovirus 68 in Yamagata, Japan between 2005 and 2010
    • Ikeda T, Mizuta K, Abiko C, Aoki Y, Itagaki T, et al. (2012) Acute respiratory infections due to enterovirus 68 in Yamagata, Japan between 2005 and 2010. Microbiol Immunol 56: 139-143.
    • (2012) Microbiol Immunol , vol.56 , pp. 139-143
    • Ikeda, T.1    Mizuta, K.2    Abiko, C.3    Aoki, Y.4    Itagaki, T.5
  • 27
    • 0034003829 scopus 로고    scopus 로고
    • Identification of a cis-acting replication element within the poliovirus coding region
    • Goodfellow I, Chaundry Y, Richardson A, Meredith J, Almond JW, et al. (2000) Identification of a cis-acting replication element within the poliovirus coding region. J Virol 74: 4590-4600.
    • (2000) J Virol , vol.74 , pp. 4590-4600
    • Goodfellow, I.1    Chaundry, Y.2    Richardson, A.3    Meredith, J.4    Almond, J.W.5
  • 28
    • 0043210409 scopus 로고    scopus 로고
    • Complete genomic sequencing shows that polioviruses and members of human enteroviruses species c are closely related in the non capside coding region
    • Brown B, Oberste MS, Maher K, Pallansch MA, (2003) Complete genomic sequencing shows that polioviruses and members of human enteroviruses species c are closely related in the non capside coding region. J Virol 77: 8973-8984.
    • (2003) J Virol , vol.77 , pp. 8973-8984
    • Brown, B.1    Oberste, M.S.2    Maher, K.3    Pallansch, M.A.4
  • 29
    • 0033988485 scopus 로고    scopus 로고
    • A cysteine-rich motif in poliovirus protein 2CATPase is involved in RNA replication and binds zinc in vitro
    • Pfister T, Jones KW, Wimmer E, (2000) A cysteine-rich motif in poliovirus protein 2CATPase is involved in RNA replication and binds zinc in vitro. J Virol 74: 334-343.
    • (2000) J Virol , vol.74 , pp. 334-343
    • Pfister, T.1    Jones, K.W.2    Wimmer, E.3
  • 31
    • 0028359843 scopus 로고
    • The 5′-untranslated regions of picornavirus RNAs contain independent functional domains essential for RNA replication and translation
    • Rohll JB, Percy N, Ley R, Evans DJ, Almond JW, et al. (1994) The 5′-untranslated regions of picornavirus RNAs contain independent functional domains essential for RNA replication and translation. J Virol 68: 4384-4391.
    • (1994) J Virol , vol.68 , pp. 4384-4391
    • Rohll, J.B.1    Percy, N.2    Ley, R.3    Evans, D.J.4    Almond, J.W.5
  • 32
    • 0032849327 scopus 로고    scopus 로고
    • Evidence of recombination among enteroviruses
    • Santti J, Hyypiä T, Kinnunen L, Salminen M, (1999) Evidence of recombination among enteroviruses. J Virol 73: 8741-8749.
    • (1999) J Virol , vol.73 , pp. 8741-8749
    • Santti, J.1    Hyypiä, T.2    Kinnunen, L.3    Salminen, M.4
  • 33
    • 18744408450 scopus 로고    scopus 로고
    • Role of recombination in evolution of enteroviruses
    • Lukashev AN, (2005) Role of recombination in evolution of enteroviruses. Rev Med Virol 15: 157-167.
    • (2005) Rev Med Virol , vol.15 , pp. 157-167
    • Lukashev, A.N.1
  • 34
    • 33645992762 scopus 로고    scopus 로고
    • Frequency and dynamics of recombination within different species of human enteroviruses
    • Simmonds P, Welch J, (2006) Frequency and dynamics of recombination within different species of human enteroviruses. J Virol 80: 483-493.
    • (2006) J Virol , vol.80 , pp. 483-493
    • Simmonds, P.1    Welch, J.2
  • 35
    • 0346688632 scopus 로고    scopus 로고
    • Evidence of frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes
    • Oberste MS, Maher K, Pallansch MA, (2004) Evidence of frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes. J. Virol 78: 855-867.
    • (2004) J. Virol , vol.78 , pp. 855-867
    • Oberste, M.S.1    Maher, K.2    Pallansch, M.A.3
  • 36
    • 67849133623 scopus 로고    scopus 로고
    • Resolving ambiguities in genetic typing of human enteroviruses species C clinical isolates and identification of enterovirus 96, 99 and 102
    • Brown B, Maher K, Flemister MR, Naraghi-Arani P, Uddin M, et al. (2009) Resolving ambiguities in genetic typing of human enteroviruses species C clinical isolates and identification of enterovirus 96, 99 and 102. J Gen Virol90: 1713-1723.
    • (2009) J Gen Virol , vol.90 , pp. 1713-1723
    • Brown, B.1    Maher, K.2    Flemister, M.R.3    Naraghi-Arani, P.4    Uddin, M.5
  • 37
    • 67651108216 scopus 로고    scopus 로고
    • Phylogeography of circulating populations of human echovirus 30 over 50 years: nucleotide polymorphism and signature of purifying selection in the VP1 capsid protein gene
    • Bailly JL, Mirand A, Henquell C, Archimbaud C, Chambon M, et al. (2009) Phylogeography of circulating populations of human echovirus 30 over 50 years: nucleotide polymorphism and signature of purifying selection in the VP1 capsid protein gene. Infect Genet Evol 9: 699-708.
    • (2009) Infect Genet Evol , vol.9 , pp. 699-708
    • Bailly, J.L.1    Mirand, A.2    Henquell, C.3    Archimbaud, C.4    Chambon, M.5
  • 38
    • 0033952346 scopus 로고    scopus 로고
    • Molecular epidemiology of coxsackievirus B4 and disclosure of the correct VP1/2A(pro) cleavage site: evidence for high genomic diversity and long-term endemicity of distinct genotypes
    • Mulders MN, Salminen M, Kalkkinen N, Hovi T, (2000) Molecular epidemiology of coxsackievirus B4 and disclosure of the correct VP1/2A(pro) cleavage site: evidence for high genomic diversity and long-term endemicity of distinct genotypes. J Gen Virol81: 803-812.
    • (2000) J Gen Virol , vol.81 , pp. 803-812
    • Mulders, M.N.1    Salminen, M.2    Kalkkinen, N.3    Hovi, T.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.