Worldwide emergence of multiple clades of enterovirus 68

Journal of General Virology

Volumn 93, Issue PART 9, 2012, Pages 1952-1958

  Tokarz, Rafal ^a   Firth, Cadhla ^a   Madhi, Shabir A ^b,c   Howie, Stephen R C ^d   Wu, Winfred ^e   Sall, Amadou Alpha ^a   Haq, Saddef ^a   Briese, Thomas ^a   Ian Lipkin, W ^a  

^a Columbia University ^*  (United States)

^b NATIONAL INSTITUTE FOR COMMUNICABLE DISEASES   (South Africa)

^c UNIVERSITY OF THE WITWATERSRAND   (South Africa)

^d MEDICAL RESEARCH COUNCIL LABORATORIES   (Gambia)

^e NEW YORK CITY DEPARTMENT OF HEALTH AND MENTAL HYGIENE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADOLESCENT; ADULT; AFRICA; ARTICLE; CHILD; ENTEROVIRUS; ENTEROVIRUS 68; ENTEROVIRUS INFECTION; FEMALE; GENE SEQUENCE; HUMAN; INFANT; MAJOR CLINICAL STUDY; MALE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRESCHOOL CHILD; PRIORITY JOURNAL; RESPIRATORY TRACT DISEASE; SCHOOL CHILD; UNITED STATES; VIRUS STRAIN;

ADOLESCENT; ADULT; ASIA; BASE SEQUENCE; CHILD; CHILD, PRESCHOOL; COMMUNICABLE DISEASES, EMERGING; ENTEROVIRUS D, HUMAN; ENTEROVIRUS INFECTIONS; EUROPE; FEMALE; HUMANS; INFANT; MALE; MOLECULAR SEQUENCE DATA; NORTH AMERICA; PHYLOGENY; WORLD HEALTH; YOUNG ADULT;

EID: 84865111474     PISSN: 00221317     EISSN: 14652099     Source Type: Journal    
DOI: 10.1099/vir.0.043935-0     Document Type: Article

References (25)

1. Briese, T., Palacios, G., Kokoris, M., Jabado, O., Liu, Z., Renwick, N., Kapoor, V., Casas, I., Pozo, F. & other authors (2005). Diagnostic system for rapid and sensitive differential detection of pathogens. Emerg Infect Dis 11, 310-313.
2. CDC (2011). Clusters of acute respiratory illness associated with human enterovirus 68 - Asia, Europe, and United States, 2008-2010. MMWR Morb Mortal Wkly Rep 60, 1301-1304.
3. Coiras, M. T., Aguilar, J. C., García, M. L., Casas, I. & Pérez-Breña, P. (2004). Simultaneous detection of fourteen respiratory viruses in clinical specimens by two multiplex reverse transcription nested-PCR assays. J Med Virol 72, 484-495.
4. Drummond, A. J. & Rambaut, A. (2007). BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7, 214.
5. Gromeier, M., Alexander, L. & Wimmer, E. (1996). Internal ribosomal entry site substitution eliminates neurovirulence in intergeneric poliovirus recombinants. Proc Natl Acad Sci U S A 93, 2370-2375.
6. Guindon, S. & Gascuel, O. (2003). A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52, 696-704.
7. Hasegawa, S., Hirano, R., Okamoto-Nakagawa, R., Ichiyama, T. & Shirabe, K. (2011). Enterovirus 68 infection in children with asthma attacks: virus-induced asthma in Japanese children. Allergy 66, 1618-1620.
8. Ikeda, T., Mizuta, K., Abiko, C., Aoki, Y., Itagaki, T., Katsushima, F., Katsushima, Y., Matsuzaki, Y., Fuji, N. & other authors (2012). Acute respiratory infections due to enterovirus 68 in Yamagata, Japan between 2005 and 2010. Microbiol Immunol 56, 139-143.
9. Imamura, T., Fuji, N., Suzuki, A., Tamaki, R., Saito, M., Aniceto, R., Galang, H., Sombrero, L., Lupisan, S. & Oshitani, H. (2011). Enterovirus 68 among children with severe acute respiratory infection, the Philippines. Emerg Infect Dis 17, 1430-1435.
10. Jacobson, L. M., Redd, J. T., Schneider, E., Lu, X., Chern, S. W., Oberste, M. S., Erdman, D. D., Fischer, G. E., Armstrong, G. L. & other authors (2012). Outbreak of lower respiratory tract illness associated with human enterovirus 68 among American Indian children. Pediatr Infect Dis J 31, 309-312.
11. Kaida, A., Kubo, H., Sekiguchi, J., Kohdera, U., Togawa, M., Shiomi, M., Nishigaki, T. & Iritani, N. (2011). Enterovirus 68 in children with acute respiratory tract infections, Osaka, Japan. Emerg Infect Dis 17, 1494-1497.
12. Khetsuriani, N., Lamonte-Fowlkes, A., Oberst, S., Pallansch, M. A. & Centers for Disease Control and Prevention (2006). Enterovirus surveillance - United States, 1970-2005. MMWR Surveill Summ 55, 1-20.
13. Lamson, D., Renwick, N., Kapoor, V., Liu, Z., Palacios, G., Ju, J., Dean, A., St George, K., Briese, T. & Lipkin, W. I. (2006). MassTag polymerase-chain-reaction detection of respiratory pathogens, including a new rhinovirus genotype, that caused influenza-like illness in New York State during 2004-2005. J Infect Dis 194, 1398-1402.
14. Li, R., Zou, Q., Chen, L., Zhang, H. & Wang, Y. (2011). Molecular analysis of virulent determinants of enterovirus 71. PLoS ONE 6, e26237.
15. Meijer, A., van der Sanden, S., Snijders, B. E., Jaramillo-Gutierrez, G., Bont, L., van der Ent, C. K., Overduin, P., Jenny, S. L., Jusic, E. & other authors (2012). Emergence and epidemic occurrence of enterovirus 68 respiratory infections in The Netherlands in 2010. Virology 423, 49-57.
16. Oberste, M. S., Maher, K., Kilpatrick, D. R., Flemister, M. R., Brown, B. A. & Pallansch, M. A. (1999a). Typing of human enteroviruses by partial sequencing of VP1. J Clin Microbiol 37, 1288-1293.
17. Oberste, M. S., Maher, K., Kilpatrick, D. R. & Pallansch, M. A. (1999b). Molecular evolution of the human enteroviruses: correlation of serotype with VP1 sequence and application to picornavirus classification. J Virol 73, 1941-1948.
18. Oberste, M. S., Maher, K., Schnurr, D., Flemister, M. R., Lovchik, J. C., Peters, H., Sessions, W., Kirk, C., Chatterjee, N. & other authors (2004). Enterovirus 68 is associated with respiratory illness and shares biological features with both the enteroviruses and the rhinoviruses. J Gen Virol 85, 2577-2584.
19. Petitjean-Lecherbonnier, J., Dina, J., Nguyen, E., Gouarin, S., Lebigot, E. & Vabret, A. (2011). [Molecular diagnosis of respiratory enterovirus infections: use of PCR and molecular identification for a best approach of the main circulating strains during 2008]. Pathol Biol (Paris) 59, 113-121 (in French).
20. Piralla, A., Baldanti, F. & Gerna, G. (2011). Phylogenetic patterns of human respiratory picornavirus species, including the newly identified group C rhinoviruses, during a 1-year surveillance of a hospitalized patient population in Italy. J Clin Microbiol 49, 373-376.
21. Racaniello, R. V. (2001). Picornaviridae: the viruses and their replication. In Fields Virology, 4th edn, vol. 1, pp. 685-722. Edited by B. N. Fields, D. M. Knipe & P. M. Howley. Philadelphia, PA: Lippincott Williams & Wilkins.
22. Rahamat-Langendoen, J., Riezebos-Brilman, A., Borger, R., van der Heide, R., Brandenburg, A., Schölvinck, E. & Niesters, H. G. (2011). Upsurge of human enterovirus 68 infections in patients with severe respiratory tract infections. J Clin Virol 52, 103-106.
23. Schieble, J. H., Fox, V. L. & Lennette, E. H. (1967). A probable new human picornavirus associated with respiratory diseases. Am J Epidemiol 85, 297-310.
24. Tokarz, R., Kapoor, V., Wu, W., Lurio, J., Jain, K., Mostashari, F., Briese, T. & Lipkin, W. I. (2011). Longitudinal molecular microbial analysis of influenza-like illness in New York City, May 2009 through May 2010. Virol J 8, 288.
25. Wang, Z., Malanoski, A. P., Lin, B., Long, N. C., Leski, T. A., Blaney, K. M., Hansen, C. J., Brown, J., Broderick, M. & other authors (2010). Broad spectrum respiratory pathogen analysis of throat swabs from military recruits reveals interference between rhinoviruses and adenoviruses. Microb Ecol 59, 623-634.