Emergence and epidemic occurrence of enterovirus 68 respiratory infections in The Netherlands in 2010

Virology

Volumn 423, Issue 1, 2012, Pages 49-57

  Meijer, Adam ^a   Van Der Sanden, Sabine ^a,b   Snijders, Bianca E P ^a   Jaramillo Gutierrez, Giovanna ^a,c   Bont, Louis ^d   Van Der Ent, Cornelis K ^d   Overduin, Pieter ^a   Jenny, Shireen L ^a   Jusic, Edin ^a   Van Der Avoort, Harrie G A M ^a   Smith, Gavin J D ^e   Donker, Gé A ^f   Koopmans, Marion P G ^a,b  

^a NATIONAL INSTITUTE FOR PUBLIC HEALTH AND THE ENVIRONMENT   (Netherlands)

^b ERASMUS MEDICAL CENTER   (Netherlands)

^c EUROPEAN CENTRE FOR DISEASE PREVENTION AND CONTROL ECDC   (Sweden)

^d UNIVERSITY MEDICAL CENTER UTRECHT   (Netherlands)

^e DUKE NUS MEDICAL SCHOOL   (Singapore)

^f NETHERLANDS INSTITUTE FOR HEALTH SERVICES RESEARCH   (Netherlands)

Author keywords

Enterovirus D, human; Enterovirus type 68; Epidemiology; Molecular diagnostics; Molecular dynamics; Molecular evolution; Phylogeny; Sentinel surveillance; Upper respiratory tract infections

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; BRONCHITIS; CHILD; COHORT ANALYSIS; CONTROLLED STUDY; COUGHING; DYSPNEA; ENTEROVIRUS; EPIDEMIC; HUMAN; MAJOR CLINICAL STUDY; NETHERLANDS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; RESPIRATORY TRACT INFECTION; RETROSPECTIVE STUDY; SCHOOL CHILD; SYMPTOMATOLOGY; VIRUS DETECTION; VIRUS STRAIN; VIRUS VIRULENCE;

ADOLESCENT; ADULT; AGED; AGED, 80 AND OVER; CHILD; CHILD, PRESCHOOL; ENTEROVIRUS D, HUMAN; ENTEROVIRUS INFECTIONS; EPIDEMICS; FEMALE; HUMANS; INFANT; MALE; MIDDLE AGED; MOLECULAR SEQUENCE DATA; NETHERLANDS; PHYLOGENY; RESPIRATORY TRACT INFECTIONS; RETROSPECTIVE STUDIES; YOUNG ADULT;

ENTEROVIRUS; HUMAN ENTEROVIRUS 68;

EID: 84855347917     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1016/j.virol.2011.11.021     Document Type: Article

References (45)

1. Abramson J.H. WINPEPI updated: computer programs for epidemiologists, and their teaching potential. Epidemiol. Perspect. Innov. 2011, 8:1.
2. Andeweg A.C., Bestebroer T.M., Huybreghs M., Kimman T.G., de Jong J.C. Improved detection of rhinoviruses in clinical samples by using a newly developed nested reverse transcription-PCR assay. J. Clin. Microbiol. 1999, 37:524-530.
3. Andréoletti L., Renois F., JérÔme J., Lévêque N. Entérovirus non poliomyélitiques et pathologies respiratoires. Med. Sci. (Paris) 2009, 25:921-929.
4. Blomqvist S., Savolainen C., Råman L., Roivainen M., Hovi T. Human rhinovirus 87 and enterovirus 68 represent a unique serotype with rhinovirus and enterovirus features. J. Clin. Microbiol. 2002, 40:4218-4223.
5. Centers for Disease Control and Prevention (CDC) Clusters of acute respiratory illness associated with human enterovirus 68 - Asia, Europe, and United States, 2008-2010. MMWR Morb. Mortal. Wkly. Rep. 2011, 60:1301-1304.
6. Chambon M., Archimbaud C., Bailly J.L., Gourgand J.M., Charbonné F., Peigue-Lafeuille H. Virucidal efficacy of glutaraldehyde against enteroviruses is related to the location of lysine residues in exposed structures of the VP1 capsid protein. Appl. Environ. Microbiol. 2004, 70:1717-1722.
7. de Almeida M.B., Zerbinati R.M., Tateno A.F., Oliveira C.M., Romão R.M., Rodrigues J.C., Pannuti C.S., da Silva Filho L.V. Rhinovirus C and respiratory exacerbations in children with cystic fibrosis. Emerg. Infect. Dis. 2010, 16:996-999.
8. Donker G.A. Continuous Morbidity Registration at Dutch Sentinel General Practice Network 2009 2011, NIVEL, Utrecht, The Netherlands, Accessed April 30, 2011. http://www.nivel.nl/oc2/page.asp?PageID=15587&path=/Startpunt/NIVEL.
9. Drummond A.J., Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 2007, 7:214.
10. Drummond A.J., Rambaut A., Shapiro B., Pybus O.G. Bayesian coalescent inference of past population dynamics from molecular sequences. Mol. Biol. Evol. 2005, 22:1185-1192.
11. Drummond A.J., Ho S.Y., Phillips M.J., Rambaut A. Relaxed phylogenetics and dating with confidence. PLoS Biol. 2006, 4:e88.
12. Houben M.L., Nikkels P.G., van Bleek G.M., Visser G.H., Rovers M.M., Kessel H., de Waal W.J., Schuijff L., Evers A., Kimpen J.L., Bont L. The association between intrauterine inflammation and spontaneous vaginal delivery at term: a cross-sectional study. PLoS One 2009, 4:e6572.
13. Imamura T., Fuji N., Suzuki A., Tamaki R., Saito M., Aniceto R., Galang H., Sombrero L., Lupisan S., Oshitani H. Enterovirus 68 among children with severe acute respiratory infection, the Philippines. Emerg. Infect. Dis. 2011, 17:1430-1435.
14. Ishiko H., Miura R., Shimada Y., Hayashi A., Nakajima H., Yamazaki S., Takeda N. Human rhinovirus 87 identified as human enterovirus 68 by VP4-based molecular diagnosis. Intervirology 2002, 45:136-141.
15. Kaida A., Kubo H., Sekiguchi J., Kohdera U., Togawa M., Shiomi M., Nishigaki T., Iritani N. Enterovirus 68 in children with acute respiratory tract infections, Osaka, Japan. Emerg. Infect. Dis. 2011, 17:1494-1497.
16. Kämmerer U., Kunkel B., Korn K. Nested PCR for specific detection and rapid identification of human picornaviruses. J. Clin. Microbiol. 1994, 32:285-291.
17. Kapikian A.Z., Conant R.M., Hamparian V.V., Chanock R.M., Dick E.C., Gwaltney J.M., Hamre D., Jordan W.S., Kenny G.E., Lennette E.H., Melnick J.L., Mogabgab W.J., Phillips C.A., Schieble J.H., Stott E.J., Tyrrell D.A.J. A collaborative report: rhinoviruses - extension of the numbering system. Virology 1971, 43:524-526.
18. Katier N., Uiterwaal C.S., de Jong B.M., Kimpen J.L., Verheij T.J., Grobbee D.E., Brunekreef B., Numans M.E., van der Ent C.K. The Wheezing Illnesses Study Leidsche Rijn (WHISTLER): rationale and design. Eur. J. Epidemiol. 2004, 19:895-903. the Wheezing Illnesses Study Leidsche Rijn Study Group.
19. Khetsuriani N., Lamonte-Fowlkes A., Oberst S., Pallansch M.A., Centers for Disease Control and Prevention Enterovirus surveillance-United States, 1970-2005. MMWR Surveill. Summ. 2006, 55:1-20.
20. Kreuter J.D., Barnes A., McCarthy J.E., Schwartzman J.D., Oberste M.S., Rhodes C.H., Modlin J.F., Wright P.F. A fatal central nervous system enterovirus 68 infection. Arch. Pathol. Lab. Med. 2011, 135:793-796.
21. McPhee F., Zell R., Reimann B.Y., Hofschneider P.H., Kandolf R. Characterization of the N-terminal part of the neutralizing antigenic site I of coxsackievirus B4 by mutation analysis of antigen chimeras. Virus Res. 1994, 34:139-151.
22. Nix W.A., Oberste M.S., Pallansch M.A. Sensitive, seminested PCR amplification of VP1 sequences for direct identification of all enterovirus serotypes from original clinical specimens. J. Clin. Microbiol. 2006, 44:2698-2704.
23. Noordhoek G.T., Weel J.F., Poelstra E., Hooghiemstra M., Brandenburg A.H. Clinical validation of a new real-time PCR assay for detection of enteroviruses and parechoviruses, and implications for diagnostic procedures. J. Clin. Virol. 2008, 41:75-80.
24. Norder H., Bjerregaard L., Magnius L., Lina B., Aymard M., Chomel J.J. Sequencing of 'untypable' enteroviruses reveals two new types, EV-77 and EV-78, within human enterovirus type B and substitutions in the BC loop of the VP1 protein for known types. J. Gen. Virol. 2003, 84:827-836.
25. Oberste M.S., Maher K., Kilpatrick D.R., Pallansch M.A. Molecular evolution of the human enteroviruses: correlation of serotype with VP1 sequence and application to picornavirus classification. J. Virol. 1999, 73:1941-1948.
26. Oberste M.S., Maher K., Schnurr D., Flemister M.R., Lovchik J.C., Peters H., Sessions W., Kirk C., Chatterjee N., Fuller S., Hanauer J.M., Pallansch M.A. Enterovirus 68 is associated with respiratory illness and shares biological features with both the enteroviruses and the rhinoviruses. J. Gen. Virol. 2004, 85:2577-2584.
27. Pel J.Z.S. Proefonderzoek naar de frequentie en de aetiologie van griepachtige ziekten in de winter 1963-1964. Huisarts Wet. 1965, 8:321.
28. Petitjean-Lecherbonnier J., Dina J., Nguyen E., Gouarin S., Lebigot E., Vabret A. Molecular diagnosis of respiratory enterovirus infections: use of PCR and molecular identification for a best approach of the main circulating strains during 2008. Pathol. Biol. (Paris) 2011, 59:113-121.
29. Piralla A., Baldanti F., Gerna G. Phylogenetic patterns of human respiratory picornavirus species, including the newly identified group C rhinoviruses, during one-year surveillance of an hospitalized patient population in Italy. J. Clin. Microbiol. 2011, 49:373-376.
30. Rahamat-Langendoen J., Riezebos-Brilman A., Borger R., van der Heide R., Brandenburg A., Schölvinck E., Niesters H.G. Upsurge of human enterovirus 68 infections in patients with severe respiratory tract infections. J. Clin. Virol. 2011, 52:103-106.
31. Rambaut A., Pybus O.G., Nelson M.I., Viboud C.J., Taubenberger K., Holmes E.C. The genomic and epidemiological dynamics of human influenza A virus. Nature 2008, 453:615-619.
32. Renwick N., Schweiger B., Kapoor V., Liu Z., Villari J., Bullmann R., Miething R., Briese T., Lipkin W.I. A recently identified rhinovirus genotype is associated with severe respiratory-tract infection in children in Germany. J. Infect. Dis. 2007, 196:1754-1760.
33. Rotbart H.A. Human Enterovirus Infections 1995, American Society for Microbiology, Washington.
34. Savolainen C., Blomqvist S., Mulders M.N., Hovi T. Genetic clustering of all 102 human rhinovirus prototype strains: serotype 87 is close to human enterovirus 70. J. Gen. Virol. 2002, 83:333-340.
35. Savolainen-Kopra C., Blomqvist S., Kaijalainen S., Jounio U., Juvonen R., Peitso A., Saukkoriipi A., Vainio O., Hovi T., Roivainen M. All known human rhinovirus species are present in sputum specimens of military recruits during respiratory infection. Viruses 2009, 1:1178-1189.
36. Schieble J.H., Fox V.L., Lennette E.H. A probable new human picornavirus associated with respiratory diseases. Am. J. Epidemiol. 1967, 85:297-310.
37. She R.C., Hymas W.C., Taggart E.W., Petti C.A., Hillyard D.R. Performance of enterovirus genotyping targeting the VP1 and VP2 regions on non-typeable isolates and patient specimens. J. Virol. Meth. 2010, 165:46-50.
38. Smura T., Ylipaasto P., Klemola P., Kaijalainen S., Kyllönen L., Sordi V., Piemonti L., Roivainen M. Cellular tropism of human enterovirus D species serotypes EV-94, EV-70, and EV-68 in vitro: implications for pathogenesis. J. Med. Virol. 2010, 82:1940-1949.
39. Suchard M.A., Kitchen C.M., Sinsheimer J.S., Weiss R.E. Hierarchical phylogenetic models for analyzing multipartite sequence data. Syst. Biol. 2003, 52:649-664.
40. Tokarz R., Kapoor V., Wu W., Lurio J., Jain K., Mostashari F., Briese T., Lipkin W.I. Longitudinal molecular microbial analysis of influenza-like illness in New York City, May 2009 through May 2010. Virol. J. 2011, 8:288.
41. van der Zalm M.M., Uiterwaal C.S., Wilbrink B., Koopman M., Verheij T.J., van der Ent C.K. The influence of neonatal lung function on rhinovirus associated wheeze. Am. J. Respir. Crit. Care Med. 2011, 183:262-267.
42. van Ewijk B.E., van der Zalm M.M., Wolfs T.F., Fleer A., Kimpen J.L., Wilbrink B., van der Ent C.K. Prevalence and impact of respiratory viral infections in young children with cystic fibrosis: prospective cohort study. Pediatrics 2008, 122:1171-1176.
43. van Gageldonk-Lafeber A.B., Heijnen M.L., Bartelds A.I., Peters M.F., van der Plas S.M., Wilbrink B. A case-control study of acute respiratory tract infection in general practice patients in The Netherlands. Clin. Infect. Dis. 2005, 41:490-497.
44. Wang Z., Malanoski A.P., Lin B., Long N.C., Leski T.A., Blaney K.M., Hansen C.J., Brown J., Broderick M., Stenger D.A., Tibbetts C., Russell K.L., Metzgar D. Broad spectrum respiratory pathogen analysis of throat swabs from military recruits reveals interference between rhinoviruses and adenoviruses. Microb. Ecol. 2010, 59:623-634.
45. Zaoutis T., Klein J.D. Enterovirus infections. Pediatr. Rev. 1998, 19:183-191.