-
1
-
-
33745948778
-
Slide-based cytometry for cytomics-a minireview
-
Tarnok A. Slide-based cytometry for cytomics-a minireview. Cytometry A 2006; 69A: 555-562.
-
(2006)
Cytometry A
, vol.69 A
, pp. 555-562
-
-
Tarnok, A.1
-
2
-
-
33845792555
-
others
-
Carpenter AE, Jones TR, Lamprecht MR, Clarke C, Kang IH, Friman O, Guertin DA, Chang JH, Lindquist RA, Moffat J and others. CellProfiler: Image analysis software for identifying and quantifying cell phenotypes. Genome Biol 2006; 7: R100.
-
(2006)
CellProfiler: Image analysis software for identifying and quantifying cell phenotypes. Genome Biol
, vol.7
-
-
Carpenter, A.E.1
Jones, T.R.2
Lamprecht, M.R.3
Clarke, C.4
Kang, I.H.5
Friman, O.6
Guertin, D.A.7
Chang, J.H.8
Lindquist, R.A.9
Moffat, J.10
-
3
-
-
33847710201
-
CellProfiler: Free, versatile software for automated biological image analysis
-
Lamprecht MR, Sabatini DM, Carpenter AE. CellProfiler: Free, versatile software for automated biological image analysis. Biotechniques 2007; 42: 71-75.
-
(2007)
Biotechniques
, vol.42
, pp. 71-75
-
-
Lamprecht, M.R.1
Sabatini, D.M.2
Carpenter, A.E.3
-
4
-
-
67649891333
-
Quantification and its applications in fluorescent microscopy imaging
-
Hamilton N. Quantification and its applications in fluorescent microscopy imaging. Traffic 2009; 10: 951-961.
-
(2009)
Traffic
, vol.10
, pp. 951-961
-
-
Hamilton, N.1
-
5
-
-
73549102171
-
3rd. Udp-glucose dehydrogenase as a novel field-specific candidate biomarker of prostate cancer
-
Huang D, Casale GP, Tian J, Lele SM, Pisarev VM, Simpson MA, Hemstreet GP, 3rd. Udp-glucose dehydrogenase as a novel field-specific candidate biomarker of prostate cancer. Int J Cancer 2010; 126: 315-327.
-
(2010)
Int J Cancer
, vol.126
, pp. 315-327
-
-
Huang, D.1
Casale, G.P.2
Tian, J.3
Lele, S.M.4
Pisarev, V.M.5
Simpson, M.A.6
Hemstreet, G.P.7
-
6
-
-
67651177529
-
Quantitative in situ detection of phosphoproteins in fixed tissues using quantum dot technology
-
Bodo J, Durkin L, Hsi ED. Quantitative in situ detection of phosphoproteins in fixed tissues using quantum dot technology. J Histochem Cytochem 2009; 57: 701-708.
-
(2009)
J Histochem Cytochem
, vol.57
, pp. 701-708
-
-
Bodo, J.1
Durkin, L.2
Hsi, E.D.3
-
7
-
-
67649612733
-
Accuracy and precision in quantitative fluorescence microscopy
-
Waters JC. Accuracy and precision in quantitative fluorescence microscopy. J Cell Biol 2009; 185: 1135-1148.
-
(2009)
J Cell Biol
, vol.185
, pp. 1135-1148
-
-
Waters, J.C.1
-
8
-
-
79958297186
-
Multiple immunofluorescence labeling of formalin-fixed paraffin-embedded tissue
-
Robertson D, Isacke CM. Multiple immunofluorescence labeling of formalin-fixed paraffin-embedded tissue. Methods Mol Biol 2011; 724: 69-77.
-
(2011)
Methods Mol Biol
, vol.724
, pp. 69-77
-
-
Robertson, D.1
Isacke, C.M.2
-
9
-
-
0023340925
-
[Recommendation for uniform definition of an immunoreactive score (IRS) for immunohistochemical estrogen receptor detection (ER-ICA) in breast cancer tissue]
-
Remmele W, Stegner HE. [Recommendation for uniform definition of an immunoreactive score (IRS) for immunohistochemical estrogen receptor detection (ER-ICA) in breast cancer tissue]. Pathologe 1987; 8: 138-140.
-
(1987)
Pathologe
, vol.8
, pp. 138-140
-
-
Remmele, W.1
Stegner, H.E.2
-
10
-
-
50249187841
-
Virtual microscopy as an enabler of automated/quantitative assessment of protein expression in TMAs
-
Conway C, Dobson L, O'Grady A, Kay E, Costello S, O'Shea D. Virtual microscopy as an enabler of automated/quantitative assessment of protein expression in TMAs. Histochem Cell Biol 2008; 130: 447-463.
-
(2008)
Histochem Cell Biol
, vol.130
, pp. 447-463
-
-
Conway, C.1
Dobson, L.2
O'Grady, A.3
Kay, E.4
Costello, S.5
O'Shea, D.6
-
11
-
-
0024450542
-
Influence of fixation, exciting light and section thickness on the primary fluorescence of samples for microfluorometric analysis
-
Del Castillo P, Llorente AR, Stockert JC. Influence of fixation, exciting light and section thickness on the primary fluorescence of samples for microfluorometric analysis. Basic Appl Histochem 1989; 33: 251-257.
-
(1989)
Basic Appl Histochem
, vol.33
, pp. 251-257
-
-
Del Castillo, P.1
Llorente, A.R.2
Stockert, J.C.3
-
12
-
-
35348831178
-
Age-dependent increase in green autofluorescence of blood erythrocytes
-
Khandelwal S, Saxena RK. Age-dependent increase in green autofluorescence of blood erythrocytes. J Biosci 2007; 32: 1139-1145.
-
(2007)
J Biosci
, vol.32
, pp. 1139-1145
-
-
Khandelwal, S.1
Saxena, R.K.2
-
13
-
-
9544235179
-
Autofluorescence characterization of advanced glycation end products of hemoglobin
-
Vigneshwaran N, Bijukumar G, Karmakar N, Anand S, Misra A. Autofluorescence characterization of advanced glycation end products of hemoglobin. Spectrochim Acta A Mol Biomol Spectrosc 2005; 61: 163-170.
-
(2005)
Spectrochim Acta A Mol Biomol Spectrosc
, vol.61
, pp. 163-170
-
-
Vigneshwaran, N.1
Bijukumar, G.2
Karmakar, N.3
Anand, S.4
Misra, A.5
-
14
-
-
70449449612
-
Hyperglycemia and glycation in diabetic complications
-
Negre-Salvayre A, Salvayre R, Auge N, Pamplona R, Portero-Otin M. Hyperglycemia and glycation in diabetic complications. Antioxid Redox Signal 2009; 11: 3071-3109.
-
(2009)
Antioxid Redox Signal
, vol.11
, pp. 3071-3109
-
-
Negre-Salvayre, A.1
Salvayre, R.2
Auge, N.3
Pamplona, R.4
Portero-Otin, M.5
-
15
-
-
77950989148
-
The sour side of neurodegenerative disorders: the effects of protein glycation
-
Vicente Miranda H, Outeiro TF. The sour side of neurodegenerative disorders: the effects of protein glycation. J Pathol 2010; 221: 13-25.
-
(2010)
J Pathol
, vol.221
, pp. 13-25
-
-
Vicente Miranda, H.1
Outeiro, T.F.2
-
16
-
-
28844443590
-
Accumulation of advanced glycation end products in women with preeclampsia: possible involvement of placental oxidative and nitrative stress
-
Chekir C, Nakatsuka M, Noguchi S, Konishi H, Kamada Y, Sasaki A, Hao L, Hiramatsu Y. Accumulation of advanced glycation end products in women with preeclampsia: possible involvement of placental oxidative and nitrative stress. Placenta 2006; 27: 225-233.
-
(2006)
Placenta
, vol.27
, pp. 225-233
-
-
Chekir, C.1
Nakatsuka, M.2
Noguchi, S.3
Konishi, H.4
Kamada, Y.5
Sasaki, A.6
Hao, L.7
Hiramatsu, Y.8
-
17
-
-
84867581102
-
Reduced soluble receptor for advanced glycation end-products (sRAGE) scavenger capacity precedes pre-eclampsia in Type 1 diabetes
-
others
-
Yu Y, Hanssen K, Kalyanaraman V, Chirindel A, Jenkins A, Nankervis A, Torjesen P, Scholz H, Henriksen T, Lorentzen B and others. Reduced soluble receptor for advanced glycation end-products (sRAGE) scavenger capacity precedes pre-eclampsia in Type 1 diabetes. BJOG 2012; 119: 1512-1520.
-
(2012)
BJOG
, vol.119
, pp. 1512-1520
-
-
Yu, Y.1
Hanssen, K.2
Kalyanaraman, V.3
Chirindel, A.4
Jenkins, A.5
Nankervis, A.6
Torjesen, P.7
Scholz, H.8
Henriksen, T.9
Lorentzen, B.10
-
18
-
-
0035691851
-
Control of autofluorescence of archival formaldehyde-fixed, paraffin-embedded tissue in confocal laser scanning microscopy (CLSM
-
Baschong W, Suetterlin R, Laeng RH. Control of autofluorescence of archival formaldehyde-fixed, paraffin-embedded tissue in confocal laser scanning microscopy (CLSM). J Histochem Cytochem 2001; 49: 1565-1572.
-
(2001)
J Histochem Cytochem
, vol.49
, pp. 1565-1572
-
-
Baschong, W.1
Suetterlin, R.2
Laeng, R.H.3
-
19
-
-
0030805839
-
Reducing cellular autofluorescence in flow cytometry: an in situ method
-
Mosiman VL, Patterson BK, Canterero L, Goolsby CL. Reducing cellular autofluorescence in flow cytometry: an in situ method. Cytometry 1997; 30: 151-156.
-
(1997)
Cytometry
, vol.30
, pp. 151-156
-
-
Mosiman, V.L.1
Patterson, B.K.2
Canterero, L.3
Goolsby, C.L.4
-
20
-
-
0033022410
-
Reduction of lipofuscin-like autofluorescence in fluorescently labeled tissue
-
Schnell SA, Staines WA, Wessendorf MW. Reduction of lipofuscin-like autofluorescence in fluorescently labeled tissue. J Histochem Cytochem 1999; 47: 719-730.
-
(1999)
J Histochem Cytochem
, vol.47
, pp. 719-730
-
-
Schnell, S.A.1
Staines, W.A.2
Wessendorf, M.W.3
-
21
-
-
0035871239
-
Seeing the wood through the trees: a review of techniques for distinguishing green fluorescent protein from endogenous autofluorescence
-
Billinton N, Knight AW. Seeing the wood through the trees: a review of techniques for distinguishing green fluorescent protein from endogenous autofluorescence. Anal Biochem 2001; 291: 175-197.
-
(2001)
Anal Biochem
, vol.291
, pp. 175-197
-
-
Billinton, N.1
Knight, A.W.2
-
22
-
-
34250854576
-
do Carmo A. An improved and cost-effective methodology for the reduction of autofluorescence in direct immunofluorescence studies on formalin-fixed paraffin-embedded tissues
-
Viegas MS, Martins TC, Seco F, do Carmo A. An improved and cost-effective methodology for the reduction of autofluorescence in direct immunofluorescence studies on formalin-fixed paraffin-embedded tissues. Eur J Histochem 2007; 51: 59-66.
-
(2007)
Eur J Histochem
, vol.51
, pp. 59-66
-
-
Viegas, M.S.1
Martins, T.C.2
Seco, F.3
-
23
-
-
62149118688
-
A semi-automatic method for quantification and classification of erythrocytes infected with malaria parasites in microscopic images
-
Diaz G, Gonzalez FA, Romero E. A semi-automatic method for quantification and classification of erythrocytes infected with malaria parasites in microscopic images. J Biomed Inform 2009; 42: 296-307.
-
(2009)
J Biomed Inform
, vol.42
, pp. 296-307
-
-
Diaz, G.1
Gonzalez, F.A.2
Romero, E.3
-
24
-
-
0346756192
-
Automated analysis of morphometric parameters for accurate definition of erythrocyte cell shape
-
Albertini MC, Teodori L, Piatti E, Piacentini MP, Accorsi A, Rocchi MB. Automated analysis of morphometric parameters for accurate definition of erythrocyte cell shape. Cytometry A 2003; 52A: 12-18.
-
(2003)
Cytometry A
, vol.52 A
, pp. 12-18
-
-
Albertini, M.C.1
Teodori, L.2
Piatti, E.3
Piacentini, M.P.4
Accorsi, A.5
Rocchi, M.B.6
-
26
-
-
84965886444
-
The equivalence of weighted kappa and the intraclass correlation coefficient as measures of reliability
-
Fleiss J, Cohen J. The equivalence of weighted kappa and the intraclass correlation coefficient as measures of reliability. Educ Psychol Meas 1973; 33: 6.
-
(1973)
Educ Psychol Meas
, vol.33
, pp. 6
-
-
Fleiss, J.1
Cohen, J.2
-
27
-
-
84255163024
-
Receptor for AGE (RAGE): Signaling mechanisms in the pathogenesis of diabetes and its complications
-
Ramasamy R, Yan SF, Schmidt AM. Receptor for AGE (RAGE): Signaling mechanisms in the pathogenesis of diabetes and its complications. Ann N Y Acad Sci 2011; 1243: 88-102.
-
(2011)
Ann N Y Acad Sci
, vol.1243
, pp. 88-102
-
-
Ramasamy, R.1
Yan, S.F.2
Schmidt, A.M.3
-
29
-
-
79952293532
-
Activation of the receptor for advanced glycation end products system in women with severe preeclampsia
-
Oliver EA, Buhimschi CS, Dulay AT, Baumbusch MA, Abdel-Razeq SS, Lee SY, Zhao G, Jing S, Pettker CM, Buhimschi IA. Activation of the receptor for advanced glycation end products system in women with severe preeclampsia. J Clin Endocrinol Metab 2011; 96: 689-698.
-
(2011)
J Clin Endocrinol Metab
, vol.96
, pp. 689-698
-
-
Oliver, E.A.1
Buhimschi, C.S.2
Dulay, A.T.3
Baumbusch, M.A.4
Abdel-Razeq, S.S.5
Lee, S.Y.6
Zhao, G.7
Jing, S.8
Pettker, C.M.9
Buhimschi, I.A.10
-
30
-
-
0032044249
-
The fine and three-dimensional observations on the basal plate surface and anchoring villi in mature human placenta
-
Demir R, Akkoyunlu G. The fine and three-dimensional observations on the basal plate surface and anchoring villi in mature human placenta. Scanning 1998; 20: 253-254.
-
(1998)
Scanning
, vol.20
, pp. 253-254
-
-
Demir, R.1
Akkoyunlu, G.2
-
31
-
-
0035680116
-
-
Rapid object detection using a boosted cascade of simple features
-
Viola P, Jones M. Rapid object detection using a boosted cascade of simple features. 2001. p I-511-I-518 vol.1.
-
(2001)
, vol.1
-
-
Viola, P.1
Jones, M.2
-
33
-
-
11244345503
-
-
An extended set of Haar-like features for rapid object detection
-
Lienhart R, Maydt J. An extended set of Haar-like features for rapid object detection. 2002. p I-900-I-903 vol.1.
-
(2002)
, vol.1
-
-
Lienhart, R.1
Maydt, J.2
-
34
-
-
0041482442
-
Chapter 7: Evaluation
-
Van Rijsbergen CJ, editor., 2nd ed. London: Butterworths
-
Blair DC. Chapter 7: Evaluation. In: Van Rijsbergen CJ, editor. Information Retrieval, 2nd ed. London: Butterworths; 1979. 208 pp.
-
(1979)
Information Retrieval
, pp. 208
-
-
Blair, D.C.1
-
35
-
-
0017360990
-
The measurement of observer agreement for categorical data
-
Landis JR, Koch GG. The measurement of observer agreement for categorical data. Biometrics 1977; 33: 159-174.
-
(1977)
Biometrics
, vol.33
, pp. 159-174
-
-
Landis, J.R.1
Koch, G.G.2
-
36
-
-
33747598268
-
Chapter 18: The Measurement of Interrater Agreement
-
Shewart WA, Samuel S, Wilks SS, editors., 3rd Ed. Wiley-Interscience; ISBN 9780471526292.
-
Fleiss J, Levin B, Paik M. Chapter 18: The Measurement of Interrater Agreement. In: Shewart WA, Samuel S, Wilks SS, editors. Statistical Methods for Rates and Proportions, 3rd Ed. Wiley-Interscience; 2003; ISBN 9780471526292.
-
(2003)
Statistical Methods for Rates and Proportions
-
-
Fleiss, J.1
Levin, B.2
Paik, M.3
-
37
-
-
0036900971
-
Spike detection: A review and comparison of algorithms
-
Wilson SB, Emerson R. Spike detection: A review and comparison of algorithms. Clin Neurophysiol 2002; 113: 1873-1881.
-
(2002)
Clin Neurophysiol
, vol.113
, pp. 1873-1881
-
-
Wilson, S.B.1
Emerson, R.2
-
38
-
-
51449101711
-
others
-
Anjomshoaa A, Lin YH, Black MA, McCall JL, Humar B, Song S, Fukuzawa R, Yoon HS, Holzmann B, Friederichs J and others. Reduced expression of a gene proliferation signature is associated with enhanced malignancy in colon cancer. Br J Cancer 2008; 99: 966-973.
-
(2008)
Reduced expression of a gene proliferation signature is associated with enhanced malignancy in colon cancer. Br J Cancer
, vol.99
, pp. 966-973
-
-
Anjomshoaa, A.1
Lin, Y.H.2
Black, M.A.3
McCall, J.L.4
Humar, B.5
Song, S.6
Fukuzawa, R.7
Yoon, H.S.8
Holzmann, B.9
Friederichs, J.10
-
39
-
-
0032877049
-
Three-dimensional visualization of cytoskeleton by confocal laser scanning microscopy
-
Baschong W, Duerrenberger M, Mandinova A, Suetterlin R. Three-dimensional visualization of cytoskeleton by confocal laser scanning microscopy. Methods Enzymol 1999; 307: 173-189.
-
(1999)
Methods Enzymol
, vol.307
, pp. 173-189
-
-
Baschong, W.1
Duerrenberger, M.2
Mandinova, A.3
Suetterlin, R.4
-
40
-
-
57749181937
-
-
A two-staged approach to vision-based pedestrian recognition using Haar and HOG features. Proc. of the IEEE Intelligent Vehicles Symposium, Eindhoven, The Netherlands, 4-6 June
-
Geismann P, Schneider G. A two-staged approach to vision-based pedestrian recognition using Haar and HOG features. Proc. of the IEEE Intelligent Vehicles Symposium, Eindhoven, The Netherlands, 4-6 June 2008. p 554-559.
-
(2008)
, pp. 554-559
-
-
Geismann, P.1
Schneider, G.2
-
41
-
-
34648822574
-
-
Real-time Vision-based Hand Gesture Recognition Using Haar-like Features. Proc. of the Instrumentation and Measurement Technology Conference (IMTC), Warsaw, Poland, 1-3 May
-
Qing C, Georganas ND, Petriu EM. Real-time Vision-based Hand Gesture Recognition Using Haar-like Features. Proc. of the Instrumentation and Measurement Technology Conference (IMTC), Warsaw, Poland, 1-3 May 2007. p 1-6.
-
(2007)
, pp. 1-6
-
-
Qing, C.1
Georganas, N.D.2
Petriu, E.M.3
-
42
-
-
34547670472
-
Detection of molecular particles in live cells via machine learning
-
Jiang S, Zhou X, Kirchhausen T, Wong ST. Detection of molecular particles in live cells via machine learning. Cytometry A 2007; 71: 563-575.
-
(2007)
Cytometry A
, vol.71
, pp. 563-575
-
-
Jiang, S.1
Zhou, X.2
Kirchhausen, T.3
Wong, S.T.4
-
43
-
-
80655139101
-
Cell motility dynamics: A novel segmentation algorithm to quantify multi-cellular bright field microscopy images
-
Zaritsky A, Natan S, Horev J, Hecht I, Wolf L, Ben-Jacob E, Tsarfaty I. Cell motility dynamics: A novel segmentation algorithm to quantify multi-cellular bright field microscopy images. PLoS One 2011; 6: e27593.
-
(2011)
PLoS One
, vol.6
-
-
Zaritsky, A.1
Natan, S.2
Horev, J.3
Hecht, I.4
Wolf, L.5
Ben-Jacob, E.6
Tsarfaty, I.7
-
44
-
-
84862769958
-
Automatic segmentation of cell nuclei in Feulgen-stained histological sections of prostate cancer and quantitative evaluation of segmentation results
-
Nielsen B, Albregtsen F, Danielsen HE. Automatic segmentation of cell nuclei in Feulgen-stained histological sections of prostate cancer and quantitative evaluation of segmentation results. Cytometry A 2012; 81A: 588-601.
-
(2012)
Cytometry A
, vol.81 A
, pp. 588-601
-
-
Nielsen, B.1
Albregtsen, F.2
Danielsen, H.E.3
-
47
-
-
70449562096
-
Bright field microscopy as an alternative to whole cell fluorescence in automated analysis of macrophage images
-
Selinummi J, Ruusuvuori P, Podolsky I, Ozinsky A, Gold E, Yli-Harja O, Aderem A, Shmulevich I. Bright field microscopy as an alternative to whole cell fluorescence in automated analysis of macrophage images. PLoS One 2009; 4: e7497.
-
(2009)
PLoS One
, vol.4
-
-
Selinummi, J.1
Ruusuvuori, P.2
Podolsky, I.3
Ozinsky, A.4
Gold, E.5
Yli-Harja, O.6
Aderem, A.7
Shmulevich, I.8
-
48
-
-
0034535382
-
Validation of tissue microarray technology in breast carcinoma
-
Camp RL, Charette LA, Rimm DL. Validation of tissue microarray technology in breast carcinoma. Lab Invest 2000; 80: 1943-1949.
-
(2000)
Lab Invest
, vol.80
, pp. 1943-1949
-
-
Camp, R.L.1
Charette, L.A.2
Rimm, D.L.3
-
49
-
-
78349242513
-
A novel histological grading scheme for placental malaria applied in areas of high and low malaria transmission
-
Muehlenbachs A, Fried M, McGready R, Harrington WE, Mutabingwa TK, Nosten F, Duffy PE. A novel histological grading scheme for placental malaria applied in areas of high and low malaria transmission. J Infect Dis 2010; 202: 1608-1616.
-
(2010)
J Infect Dis
, vol.202
, pp. 1608-1616
-
-
Muehlenbachs, A.1
Fried, M.2
McGready, R.3
Harrington, W.E.4
Mutabingwa, T.K.5
Nosten, F.6
Duffy, P.E.7
|