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Volumn 41, Issue 2, 2013, Pages 1241-1254

An in vitro network of intermolecular interactions between viral RNA segments of an avian H5N2 influenza A virus: Comparison with a human H3N2 virus

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS RNA;

EID: 84875475885     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gks1181     Document Type: Article
Times cited : (82)

References (50)
  • 1
    • 22944457912 scopus 로고    scopus 로고
    • Influenza: Lessons from past pandemics, warnings from current incidents
    • DOI 10.1038/nrmicro1208
    • Horimoto, T. and Kawaoka, Y. (2005) Influenza: lessons from past pandemics, warnings from current incidents. Nat. Rev. Micro., 3, 591-600. (Pubitemid 41052146)
    • (2005) Nature Reviews Microbiology , vol.3 , Issue.8 , pp. 591-600
    • Horimoto, T.1    Kawaoka, Y.2
  • 2
    • 34447299235 scopus 로고    scopus 로고
    • Knipe, D.M. and Howley, P.M. (eds) Williams and Wilkins, Philadelphia
    • Palese, P. and Shaw, M. (2006) In: Knipe, D.M. and Howley, P.M. (eds), Fields Virology. Lippincott. Williams and Wilkins, Philadelphia, pp. 1647-1689.
    • (2006) Fields Virology Lippincott , pp. 1647-1689
    • Palese, P.1    Shaw, M.2
  • 4
    • 0024846089 scopus 로고
    • Amplification, expression, and packaging of a foreign gene by influenza virus
    • DOI 10.1016/0092-8674(89)90766-6
    • Luytjes, W., Krystal, M., Enami, M., Parvin, J.D. and Palese, P. (1989) Amplification, expression, and packaging of foreign gene by influenza virus. Cell, 59, 1107-1113. (Pubitemid 20024621)
    • (1989) Cell , vol.59 , Issue.6 , pp. 1107-1113
    • Luytjes, W.1    Krystal, M.2    Enami, M.3    Parvin, J.D.4    Palese, P.5
  • 5
    • 0029026692 scopus 로고
    • Mutational analysis of influenza virus promoter elements in vivo
    • Neumann, G. and Hobom, G. (1995) Mutational analysis of influenza virus promoter elements in vivo. J. Gen. Virol., 76, 1709-1717.
    • (1995) J. Gen. Virol , vol.76 , pp. 1709-1717
    • Neumann, G.1    Hobom, G.2
  • 6
    • 0027978143 scopus 로고
    • RNA polymerase I-mediated expression of influenza viral RNA molecules
    • DOI 10.1006/viro.1994.1365
    • Neumann, G., Zobel, A. and Hobom, G. (1994) RNA polymerase I-mediated expression of influenza viral RNA molecules. Virology, 202, 477-479. (Pubitemid 24242021)
    • (1994) Virology , vol.202 , Issue.1 , pp. 477-479
    • Neumann, G.1    Zobel, A.2    Hobom, G.3
  • 8
    • 0023445054 scopus 로고
    • Genomic RNAs of influenza viruses are held in a circular conformation in virions and in infected cells by a terminal panhandle
    • Hsu, M.T., Parvin, J.D., Gupta, S., Krystal, M. and Palese, P. (1987) Genomic RNAs of influenza viruses are held in a circular conformation in virions and in infected cells by a terminal panhandle. Proc. Natl Acad. Sci. USA, 84, 8140-8144.
    • (1987) Proc. Natl Acad. Sci. USA , vol.84 , pp. 8140-8144
    • Hsu, M.T.1    Parvin, J.D.2    Gupta, S.3    Krystal, M.4    Palese, P.5
  • 10
    • 67649297821 scopus 로고    scopus 로고
    • Emergence and pandemic potential of swine-origin H1N1 influenza virus
    • Neumann, G., Noda, T. and Kawaoka, Y. (2009) Emergence and pandemic potential of swine-origin H1N1 influenza virus. Nature, 459, 931-939.
    • (2009) Nature , vol.459 , pp. 931-939
    • Neumann, G.1    Noda, T.2    Kawaoka, Y.3
  • 11
    • 84861908388 scopus 로고    scopus 로고
    • One influenza virus particle packages eight unique viral RNAs as shown by FISH analysis
    • Chou, Y.Y., Vafabakhsh, R., Doganay, S., Gao, Q., Ha, T. and Palese, P. (2012) One influenza virus particle packages eight unique viral RNAs as shown by FISH analysis. Proc. Natl Acad. Sci. USA, 109, 9101-9106.
    • (2012) Proc. Natl Acad. Sci. USA , vol.109 , pp. 9101-9106
    • Chou, Y.Y.1    Vafabakhsh, R.2    Doganay, S.3    Gao, Q.4    Ha, T.5    Palese, P.6
  • 12
    • 0017286522 scopus 로고
    • Influenza virus recombination I. Matrix protein markers and segregation during mixed infections
    • Laver, W.G. and Downie, J.C. (1976) Influenza virus recombination: I. Matrix protein markers and segregation during mixed infections. Virology, 70, 105-117.
    • (1976) Virology , vol.70 , pp. 105-117
    • Laver, W.G.1    Downie, J.C.2
  • 13
    • 0018412958 scopus 로고
    • Nonrandom association of parental genes in influenza A virus recombinants
    • DOI 10.1016/0042-6822(79)90430-6
    • Lubeck, M., Palese, P. and Schulman, J. (1979) Nonrandom association of parental genes in influenza A virus recombinants. Virology, 95, 269-274. (Pubitemid 9171808)
    • (1979) Virology , vol.95 , Issue.1 , pp. 269-274
    • Lubeck, M.D.1    Palese, P.2    Schulman, J.L.3
  • 14
    • 0017697770 scopus 로고
    • Three-factor cross of influenza virus
    • Nakajima, K. and Sugiura, A. (1977) Three-factor cross of influenza virus. Virology, 81, 486-489.
    • (1977) Virology , vol.81 , pp. 486-489
    • Nakajima, K.1    Sugiura, A.2
  • 15
    • 0023255393 scopus 로고
    • Defective interfering virus associated with A/Chicken/Pennsylvania/83 influenza virus
    • Chambers, T.M. and Webster, R.G. (1987) Defective interfering virus associated with A/Chicken/Pennsylvania/83 influenza virus. J. Virol., 61, 1517-1523. (Pubitemid 17069757)
    • (1987) Journal of Virology , vol.61 , Issue.5 , pp. 1517-1523
    • Chambers, T.M.1    Webster, R.G.2
  • 17
    • 0032169032 scopus 로고    scopus 로고
    • Heterologous protection of mice from a lethal human H1N1 influenza A virus infection by H3N8 equine defective interfering virus: Comparison of defective RNA sequences isolated from the DI inoculum and mouse lung
    • DOI 10.1006/viro.1998.9267
    • Duhaut, S.D. and Dimmock, N.J. (1998) Heterologous protection of mice from a lethal human H1N1 influenza A virus infection by H3N8 equine defective interfering virus: comparison of defective RNA sequences isolated from the DI inoculum and mouse lung. Virology, 248, 241-253. (Pubitemid 28417711)
    • (1998) Virology , vol.248 , Issue.2 , pp. 241-253
    • Duhaut, S.D.1    Dimmock, N.J.2
  • 18
    • 0036172445 scopus 로고    scopus 로고
    • Defective segment 1 RNAs that interfere with production of infectious influenza A virus require at least 150 nucleotides of 5' sequence: Evidence from a plasmid-driven system
    • Duhaut, S.D. and Dimmock, N.J. (2002) Defective segment 1 RNAs that interfere with production of infectious influenza A virus require at least 150 nucleotides of 50 sequence: evidence from a plasmid-driven system. J. Gen. Virol., 83, 403-411. (Pubitemid 34134248)
    • (2002) Journal of General Virology , vol.83 , Issue.2 , pp. 403-411
    • Duhaut, S.D.1    Dimmock, N.J.2
  • 19
    • 0029963536 scopus 로고    scopus 로고
    • Defective RNAs inhibit the assembly of influenza virus genome segments in a segment-specific manner
    • DOI 10.1006/viro.1996.0068
    • Duhaut, S.D. and McCauley, J.W. (1996) Defective RNAs inhibit the assembly of influenza virus genome segments in a segment-specific manner. Virology, 216, 326-337. (Pubitemid 26083378)
    • (1996) Virology , vol.216 , Issue.2 , pp. 326-337
    • Duhaut, S.D.1    McCauley, J.W.2
  • 20
    • 0020826340 scopus 로고
    • Does the higher order structure of the influenza virus ribonucleoprotein guide sequence rearrangements in influenza viral RNA?
    • Jennings, P., Finch, J. and Robertson, J. (1983) Does the higher order structure of the influenza virus ribonucleoprotein guide sequence rearrangements in influenza viral RNA? Cell, 34, 619-627.
    • (1983) Cell , vol.34 , pp. 619-627
    • Jennings, P.1    Finch, J.2    Robertson, J.3
  • 21
    • 0018343066 scopus 로고
    • Origin of small RNA in von Magnus particles of influenza virus
    • Nakajima, K., Ueda, M. and Sugiura, A. (1979) Origin of small RNA in von Magnus particles of influenza virus. J. Virol., 29, 1142-1148. (Pubitemid 9133109)
    • (1979) Journal of Virology , vol.29 , Issue.3 , pp. 1142-1148
    • Nakajima, K.1    Ueda, M.2    Sugiura, A.3
  • 22
    • 0020319031 scopus 로고
    • Complete sequence analyses show that two defective interfering influenza viral RNAs contain a single internal deletion of a polymerase gene
    • DOI 10.1073/pnas.79.7.2216
    • Nayak, D.P., Sivasubramanian, N., Davis, A.R., Cortini, R. and Sung, J. (1982) Complete sequence analyses show that two defective interfering influenza viral RNAs contain a single internal deletion of a polymerase gene. Proc. Natl Acad. Sci. USA, 79, 2216-2220. (Pubitemid 12093241)
    • (1982) Proceedings of the National Academy of Sciences of the United States of America , vol.79 , Issue.7 , pp. 2216-2220
    • Nayak, D.P.1    Sivasubramanian, N.2    Davis, A.R.3
  • 23
    • 0031054526 scopus 로고    scopus 로고
    • Segment-specific noncoding sequences of the influenza virus genome RNA are involved in the specific competition between defective interfering RNA and its progenitor RNA segment at the virion assembly step
    • Odagiri, T. and Tashiro, M. (1997) Segment-specific noncoding sequences of the influenza virus genome RNA are involved in the specific competition between defective interfering RNA and its progenitor RNA segment at the virion assembly step. J. Virol., 71, 2138-2145. (Pubitemid 27078593)
    • (1997) Journal of Virology , vol.71 , Issue.3 , pp. 2138-2145
    • Odagiri, T.1    Tashiro, M.2
  • 24
    • 0020663891 scopus 로고
    • Defective interfering influenza RNAs of polymerase 3 gene contain single as well as multiple internal deletions
    • Sivasubramanian, N. and Nayak, D. (1983) Defective interfering influenza RNAs of polymerase 3 gene contain single as well as multiple internal deletions. Virology, 124, 232-237. (Pubitemid 13142187)
    • (1983) Virology , vol.124 , Issue.2 , pp. 232-237
    • Sivasubramanian, N.1    Nayak, D.P.2
  • 25
    • 67849087094 scopus 로고    scopus 로고
    • Incorporation of influenza A virus genome segments does not absolutely require wild-type sequences
    • Fujii, K., Ozawa, M., Iwatsuki-Horimoto, K., Horimoto, T. and Kawaoka, Y. (2009) Incorporation of influenza A virus genome segments does not absolutely require wild-type sequences. J. Gen. Virol., 90, 1734-1740.
    • (2009) J. Gen. Virol , vol.90 , pp. 1734-1740
    • Fujii, K.1    Ozawa, M.2    Iwatsuki-Horimoto, K.3    Horimoto, T.4    Kawaoka, Y.5
  • 27
    • 84864148469 scopus 로고    scopus 로고
    • The Influenza A Virus PB2, PA, NP, and M Segments Play a Pivotal Role during Genome Packaging
    • Gao, Q., Chou, Y.Y., Doganay, S., Vafabakhsh, R., Ha, T. and Palese, P. (2012) The Influenza A Virus PB2, PA, NP, and M Segments Play a Pivotal Role during Genome Packaging. J. Virol., 86, 7043-7051.
    • (2012) J. Virol , vol.86 , pp. 7043-7051
    • Gao, Q.1    Chou, Y.Y.2    Doganay, S.3    Vafabakhsh, R.4    Ha, T.5    Palese, P.6
  • 28
    • 23244467786 scopus 로고    scopus 로고
    • Cis-acting packaging signals in the influenza virus PB1, PB2, and PA genomic RNA segments
    • DOI 10.1128/JVI.79.16.10348-10355.2005
    • Liang, Y., Hong, Y. and Parslow, T.G. (2005) cis-Acting packaging signals in the influenza virus PB1, PB2, and PA genomic RNA segments. J. Virol., 79, 10348-10355. (Pubitemid 41098575)
    • (2005) Journal of Virology , vol.79 , Issue.16 , pp. 10348-10355
    • Liang, Y.1    Hong, Y.2    Parslow, T.G.3
  • 29
    • 37349042511 scopus 로고    scopus 로고
    • Mutational analyses of packaging signals in influenza virus PA, PB1, and PB2 genomic RNA segments
    • DOI 10.1128/JVI.01541-07
    • Liang, Y., Huang, T., Ly, H., Parslow, T.G. and Liang, Y. (2008) Mutational analyses of packaging signals in influenza virus PA, PB1, and PB2 genomic RNA segments. J. Virol., 82, 229-236. (Pubitemid 350309139)
    • (2008) Journal of Virology , vol.82 , Issue.1 , pp. 229-236
    • Liang, Y.1    Huang, T.2    Ly, H.3    Parslow, T.G.4    Liang, Y.5
  • 30
    • 35348814973 scopus 로고    scopus 로고
    • Specific residues of the influenza A virus hemagglutinin viral RNA are important for efficient packaging into budding virions
    • DOI 10.1128/JVI.01144-07
    • Marsh, G.A., Hatami, R. and Palese, P. (2007) Specific residues of the influenza A virus hemagglutinin viral RNA are important for efficient packaging into budding virions. J. Virol., 81, 9727-9736. (Pubitemid 350067677)
    • (2007) Journal of Virology , vol.81 , Issue.18 , pp. 9727-9736
    • Marsh, G.A.1    Hatami, R.2    Palese, P.3
  • 31
  • 32
    • 63149096786 scopus 로고    scopus 로고
    • Nucleotide sequence requirements at the 50 end of the influenza A virus M RNA segment for efficient virus replication
    • Ozawa, M., Maeda, J., Iwatsuki-Horimoto, K., Watanabe, S., Goto, H., Horimoto, T. and Kawaoka, Y. (2009) Nucleotide sequence requirements at the 50 end of the influenza A virus M RNA segment for efficient virus replication. J. Virol., 83, 3384-3388.
    • (2009) J. Virol , vol.83 , pp. 3384-3388
    • Ozawa, M.1    Maeda, J.2    Iwatsuki-Horimoto, K.3    Watanabe, S.4    Goto, H.5    Horimoto, T.6    Kawaoka, Y.7
  • 34
    • 56449098772 scopus 로고    scopus 로고
    • Mutational analysis of cis-acting RNA signals in segment 7 of influenza A virus
    • Hutchinson, E.C., Curran, M.D., Read, E.K., Gog, J.R. and Digard, P. (2008) Mutational analysis of cis-acting RNA signals in segment 7 of influenza A virus. J. Virol., 82, 11869-11879.
    • (2008) J. Virol , vol.82 , pp. 11869-11879
    • Hutchinson, E.C.1    Curran, M.D.2    Read, E.K.3    Gog, J.R.4    Digard, P.5
  • 35
    • 39749119294 scopus 로고    scopus 로고
    • Highly conserved regions of influenza A virus polymerase gene segments are critical for efficient viral RNA packaging
    • DOI 10.1128/JVI.02267-07
    • Marsh, G.A., Rabadá n, R., Levine, A.J. and Palese, P. (2008) Highly conserved regions of influenza A virus polymerase gene segments are critical for efficient viral RNA packaging. J. Virol., 82, 2295-2304. (Pubitemid 351293529)
    • (2008) Journal of Virology , vol.82 , Issue.5 , pp. 2295-2304
    • Marsh, G.A.1    Rabadan, R.2    Levine, A.J.3    Palese, P.4
  • 37
    • 0036202384 scopus 로고    scopus 로고
    • Lys primer complex annealed by the nucleocapsid protein: Comparison with the heat-annealed complex
    • DOI 10.1017/S1355838202010981
    • Brule, F., Marquet, R., Rong, L., Wainberg, M.A., Roques, B.P., Le Grice, S.F., Ehresmann, B. and Ehresmann, C. (2002) Structural and functional properties of the HIV-1 RNA-tRNA(Lys)3 primer complex annealed by the nucleocapsid protein: comparison with the heat-annealed complex. RNA, 8, 8-15. (Pubitemid 34260164)
    • (2002) RNA , vol.8 , Issue.1 , pp. 8-15
    • Brule, F.1    Marquet, R.2    Rong, L.3    Wainberg, M.A.4    Roques, B.P.5    Le Grice, S.F.J.6    Ehresmann, B.7    Ehresmann, C.8
  • 39
    • 0025736770 scopus 로고
    • Dimerization of human immunodeficiency virus (type 1) RNA: Stimulation by cations and possible mechanism
    • Marquet, R., Baudin, F., Gabus, C., Darlix, J.L., Mougel, M., Ehresmann, C. and Ehresmann, B. (1991) Dimerization of human immunodeficiency virus (type 1) RNA: stimulation by cations and possible mechanism. Nucleic Acids Res., 19, 2349-2357. (Pubitemid 21902970)
    • (1991) Nucleic Acids Research , vol.19 , Issue.9 , pp. 2349-2357
    • Marquet, R.1    Baudin, F.2    Gabus, C.3    Darlix, J.-L.4    Mougel, M.5    Ehresmann, C.6    Ehresmann, B.7
  • 40
    • 0026557046 scopus 로고
    • Effect of dimerization on the conformation of the encapsidation Psi domain of Moloney murine leukemia virus RNA
    • Tounekti, N., Mougel, M., Roy, C., Marquet, R., Darlix, J.L., Paoletti, J., Ehresmann, B. and Ehresmann, C. (1992) Effect of dimerization on the conformation of the encapsidation Psi domain of Moloney murine leukemia virus RNA. J. Mol. Biol., 223, 205-220.
    • (1992) J. Mol. Biol , vol.223 , pp. 205-220
    • Tounekti, N.1    Mougel, M.2    Roy, C.3    Marquet, R.4    Darlix, J.L.5    Paoletti, J.6    Ehresmann, B.7    Ehresmann, C.8
  • 41
    • 14744274632 scopus 로고    scopus 로고
    • Importance of both the coding and the segment-specific noncoding regions of the influenza A virus NS segment for its efficient incorporation into virions
    • DOI 10.1128/JVI.79.6.3766-3774.2005
    • Fujii, K., Fujii, Y., Noda, T., Muramoto, Y., Watanabe, T., Takada, A., Goto, H., Horimoto, T. and Kawaoka, Y. (2005) Importance of both the coding and the segment-specific noncoding regions of the influenza A virus NS segment for its efficient incorporation into virions. J. Virol., 79, 3766-3774. (Pubitemid 40327964)
    • (2005) Journal of Virology , vol.79 , Issue.6 , pp. 3766-3774
    • Fujii, K.1    Fujii, Y.2    Noda, T.3    Muramoto, Y.4    Watanabe, T.5    Takada, A.6    Goto, H.7    Horimoto, T.8    Kawaoka, Y.9
  • 42
    • 31444441789 scopus 로고    scopus 로고
    • Architecture of ribonucleoprotein complexes in influenza A virus particles
    • DOI 10.1038/nature04378, PII NATURE04378
    • Noda, T., Sagara, H., Yen, A., Takada, A., Kida, H., Cheng, R.H. and Kawaoka, Y. (2006) Architecture of ribonucleoprotein complexes in influenza A virus particles. Nature, 439, 490-492. (Pubitemid 43152841)
    • (2006) Nature , vol.439 , Issue.7075 , pp. 490-492
    • Noda, T.1    Sagara, H.2    Yen, A.3    Takada, A.4    Kida, H.5    Cheng, R.H.6    Kawaoka, Y.7
  • 44
    • 0034733376 scopus 로고    scopus 로고
    • Characterization of loose and tight dimer forms of avian leukosis virus RNA
    • Polge, E., Darlix, J.L., Paoletti, J. and Fosse, P. (2000) Characterization of loose and tight dimer forms of avian leukosis virus RNA. J. Mol. Biol., 300, 41-56.
    • (2000) J. Mol. Biol , vol.300 , pp. 41-56
    • Polge, E.1    Darlix, J.L.2    Paoletti, J.3    Fosse, P.4
  • 45
    • 54049146687 scopus 로고    scopus 로고
    • Structure of the influenza virus A H5N1 nucleoprotein: Implications for RNA binding, oligomerization, and vaccine design
    • Ng, A.K.L., Zhang, H., Tan, K., Li, Z., Liu, J.H., Chan, P.K.S., Li, S.-M., Chan, W.Y., Au, S.W.N., Joachimiak, A. et al. (2008) Structure of the influenza virus A H5N1 nucleoprotein: implications for RNA binding, oligomerization, and vaccine design. FASEB J., 22, 3638-3647.
    • (2008) FASEB J , vol.22 , pp. 3638-3647
    • Ng, A.K.L.1    Zhang, H.2    Tan, K.3    Li, Z.4    Liu, J.H.5    Chan, P.K.S.6    Li, S.-M.7    Chan, W.Y.8    Au, S.W.N.9    Joachimiak, A.10
  • 46
    • 33845890539 scopus 로고    scopus 로고
    • The mechanism by which influenza A virus nucleoprotein forms oligomers and binds RNA
    • DOI 10.1038/nature05379, PII NATURE05379
    • Ye, Q., Krug, R.M. and Tao, Y.J. (2006) The mechanism by which influenza A virus nucleoprotein forms oligomers and binds RNA. Nature, 444, 1078-1082. (Pubitemid 46018528)
    • (2006) Nature , vol.444 , Issue.7122 , pp. 1078-1082
    • Ye, Q.1    Krug, R.M.2    Tao, Y.J.3
  • 47
    • 0028275669 scopus 로고
    • Structure of influenza virus RNP. I. Influenza virus nucleoprotein melts secondary structure in panhandle RNA and exposes the bases to the solvent
    • Baudin, F., Bach, C., Cusack, S. and Ruigrok, R.W. (1994) Structure of influenza virus RNP. I. Influenza virus nucleoprotein melts secondary structure in panhandle RNA and exposes the bases to the solvent. EMBO J., 13, 3158-3165. (Pubitemid 24213467)
    • (1994) EMBO Journal , vol.13 , Issue.13 , pp. 3158-3165
    • Baudin, F.1    Bach, C.2    Cusack, S.3    Ruigrok, R.W.H.4
  • 50
    • 33845534602 scopus 로고    scopus 로고
    • Kawaoka, Y. (ed) Caister Academic Press, Wymondham, Norfolk NR18 0JA, England
    • Elton, D., Digard, P., Tiley, L. and Ortin, J. (2006) In: Kawaoka, Y. (ed.), Influenza Virology: Current Topics. Caister Academic Press, Wymondham, Norfolk NR18 0JA, England, pp. 1-36.
    • (2006) Influenza Virology: Current Topics , pp. 1-36
    • Elton, D.1    Digard, P.2    Tiley, L.3    Ortin, J.4


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