-
1
-
-
0030721538
-
Transposition and site-specific recombination: Adapting dna cut-And-paste mechanisms to a variety of genetic rearrangements
-
Hallet, B. and Sherratt, D.J. (1997) Transposition and site-specific recombination: adapting DNA cut-And-paste mechanisms to a variety of genetic rearrangements. FEMS Microbiol. Rev. 21, 157-178
-
(1997)
FEMS Microbiol. Rev.
, vol.21
, pp. 157-178
-
-
Hallet, B.1
Sherratt, D.J.2
-
2
-
-
33746382212
-
Mechanisms of site-specific recombination
-
Grindley, N.D., Whiteson, K.L. and Rice, P.A. (2006) Mechanisms of site-specific recombination. Annu. Rev. Biochem. 75, 567-605
-
(2006)
Annu. Rev. Biochem.
, vol.75
, pp. 567-605
-
-
Grindley, N.D.1
Whiteson, K.L.2
Rice, P.A.3
-
3
-
-
0022518195
-
Biochemical topology: Applications to dna recombination and replication
-
Wasserman, S.A. and Cozzarelli, N.R. (1986) Biochemical topology: applications to DNA recombination and replication. Science 232, 951-960
-
(1986)
Science
, vol.232
, pp. 951-960
-
-
Wasserman, S.A.1
Cozzarelli, N.R.2
-
4
-
-
0021846984
-
Duplex dna knots produced by escherichia coli topoisomerase i. Structure and requirements for formation
-
Dean, F.B., Stasiak, A., Koller, T. and Cozzarelli, N.R. (1985) Duplex DNA knots produced by Escherichia coli topoisomerase I. Structure and requirements for formation. J. Biol. Chem. 260, 4975-4983
-
(1985)
J. Biol. Chem.
, vol.260
, pp. 4975-4983
-
-
Dean, F.B.1
Stasiak, A.2
Koller, T.3
Cozzarelli, N.R.4
-
5
-
-
0020571715
-
Determination of the absolute handedness of knots and catenanes of dna
-
Krasnow, M.A., Stasiak, A., Spengler, S.J., Dean, F., Koller, T. and Cozzarelli, N.R. (1983) Determination of the absolute handedness of knots and catenanes of DNA. Nature 304, 559-560
-
(1983)
Nature
, vol.304
, pp. 559-560
-
-
Krasnow, M.A.1
Stasiak, A.2
Spengler, S.J.3
Dean, F.4
Koller, T.5
Cozzarelli, N.R.6
-
6
-
-
9644296031
-
Genetic recombination and the cell cycle: What we have learned from chromosome dimers
-
Lesterlin, C., Barre, F.X. and Cornet, F. (2004) Genetic recombination and the cell cycle: what we have learned from chromosome dimers. Mol. Microbiol. 54, 1151-1160
-
(2004)
Mol. Microbiol.
, vol.54
, pp. 1151-1160
-
-
Lesterlin, C.1
Barre, F.X.2
Cornet, F.3
-
7
-
-
1642565840
-
Recombination and chromosome segregation
-
Sherratt, D.J., Soballe, B., Barre, F.X., Filipe, S., Lau, I., Massey, T. and Yates, J. (2004) Recombination and chromosome segregation. Philos. Trans. R. Soc. London Ser. B 359, 61-69
-
(2004)
Philos. Trans. R. Soc. London Ser.
, vol.B 359
, pp. 61-69
-
-
Sherratt, D.J.1
Soballe, B.2
Barre, F.X.3
Filipe, S.4
Lau, I.5
Massey, T.6
Yates, J.7
-
8
-
-
84875389051
-
Simple topology: Ftsk-directed recombination at the dif site
-
Grainge, I. (2013) Simple topology: FtsK-directed recombination at the dif site. Biochem. Soc. Trans. 41, 595 -600
-
(2013)
Biochem. Soc. Trans.
, vol.41
, pp. 595-600
-
-
Grainge, I.1
-
9
-
-
0028225930
-
Plasmid psc101 harbors a recombination site, psi, which is able to resolve plasmid multimers and to substitute for the analogous chromosomal escherichia coli site dif
-
Cornet, F., Mortier, I., Patte, J. and Louarn, J.M. (1994) Plasmid pSC101 harbors a recombination site, psi, which is able to resolve plasmid multimers and to substitute for the analogous chromosomal Escherichia coli site dif. J. Bacteriol. 176, 3188-3195
-
(1994)
J. Bacteriol.
, vol.176
, pp. 3188-3195
-
-
Cornet, F.1
Mortier, I.2
Patte, J.3
Louarn, J.M.4
-
10
-
-
0021419102
-
Multimerization of high copy number plasmids causes instability: Cole1 encodes a determinant essential for plasmid monomerization and stability
-
Summers, D.K. and Sherratt, D.J. (1984) Multimerization of high copy number plasmids causes instability: ColE1 encodes a determinant essential for plasmid monomerization and stability. Cell 36, 1097-1103
-
(1984)
Cell
, vol.36
, pp. 1097-1103
-
-
Summers, D.K.1
Sherratt, D.J.2
-
11
-
-
80053492422
-
Multicopy plasmid stability: Revisiting the dimer catastrophe
-
Field, C.M. and Summers, D.K. (2011) Multicopy plasmid stability: revisiting the dimer catastrophe. J. Theor. Biol. 291, 119-127
-
(2011)
J. Theor. Biol.
, vol.291
, pp. 119-127
-
-
Field, C.M.1
Summers, D.K.2
-
12
-
-
0031036308
-
Plasmid stability: Comments on the dimer catastrophe hypothesis
-
Boe, L. and Tolker-Nielsen, T. (1997) Plasmid stability: comments on the dimer catastrophe hypothesis. Mol. Microbiol. 23, 247-253
-
(1997)
Mol. Microbiol.
, vol.23
, pp. 247-253
-
-
Boe, L.1
Tolker-Nielsen, T.2
-
13
-
-
0029964042
-
Xer-mediated site-specific recombination in vitro
-
Colloms, S.D., McCulloch, R., Grant, K., Neilson, L. and Sherratt, D.J. (1996) Xer-mediated site-specific recombination in vitro. EMBO J. 15, 1172-1181
-
(1996)
EMBO J.
, vol.15
, pp. 1172-1181
-
-
Colloms, S.D.1
McCulloch, R.2
Grant, K.3
Neilson, L.4
Sherratt, D.J.5
-
14
-
-
0030943173
-
Topological selectivity in xer site-specific recombination
-
Colloms, S.D., Bath, J. and Sherratt, D.J. (1997) Topological selectivity in Xer site-specific recombination. Cell 88, 855-864
-
(1997)
Cell
, vol.88
, pp. 855-864
-
-
Colloms, S.D.1
Bath, J.2
Sherratt, D.J.3
-
15
-
-
0024316734
-
Xerb, an escherichia coli gene required for plasmid cole1 site-specific recombination, is identical to pepa, encoding aminopeptidase a, a protein with substantial similarity to bovine lens leucine aminopeptidase
-
Stirling, C.J., Colloms, S.D., Collins, J.F., Szatmari, G. and Sherratt, D.J. (1989) xerB, an Escherichia coli gene required for plasmid ColE1 site-specific recombination, is identical to pepA, encoding aminopeptidase A, a protein with substantial similarity to bovine lens leucine aminopeptidase. EMBO J. 8, 1623-1627
-
(1989)
EMBO J.
, vol.8
, pp. 1623-1627
-
-
Stirling, C.J.1
Colloms, S.D.2
Collins, J.F.3
Szatmari, G.4
Sherratt, D.J.5
-
16
-
-
0024293535
-
The arginine repressor is essential for plasmid-stabilizing site-specific recombination at the cole1 cer locus
-
Stirling, C.J., Szatmari, G., Stewart, G., Smith, M.C. and Sherratt, D.J. (1988) The arginine repressor is essential for plasmid-stabilizing site-specific recombination at the ColE1 cer locus. EMBO J. 7, 4389-4395
-
(1988)
EMBO J.
, vol.7
, pp. 4389-4395
-
-
Stirling, C.J.1
Szatmari, G.2
Stewart, G.3
Smith, M.C.4
Sherratt, D.J.5
-
17
-
-
0342618313
-
Direct interaction of aminopeptidase a with recombination site dna in xer site-specific recombination
-
Alén, C., Sherratt, D.J. and Colloms, S.D. (1997) Direct interaction of aminopeptidase A with recombination site DNA in Xer site-specific recombination. EMBO J. 16, 5188-5197
-
(1997)
EMBO J.
, vol.16
, pp. 5188-5197
-
-
Alén, C.1
Sherratt, D.J.2
Colloms, S.D.3
-
18
-
-
0031979599
-
The arca/arcb two-component regulatory system of escherichia coli is essential for xer site-specific recombination at psi
-
Colloms, S.D., Alén, C. and Sherratt, D.J. (1998) The ArcA/ArcB two-component regulatory system of Escherichia coli is essential for Xer site-specific recombination at psi. Mol. Microbiol. 28, 521-530
-
(1998)
Mol. Microbiol.
, vol.28
, pp. 521-530
-
-
Colloms, S.D.1
Alén, C.2
Sherratt, D.J.3
-
19
-
-
84884878311
-
Leucyl aminopeptidase pepa
-
III Edn (Rawlings N.D. and Salvesen G. Eds) Academic Press, Washington, DC
-
Colloms, S.D. (2012) Leucyl aminopeptidase PepA. In Handbook of Proteolytic Enzymes, III edn (Rawlings, N.D. and Salvesen, G., eds), pp. 1484-1492, Academic Press, Washington, DC
-
(2012)
Handbook Of Proteolytic Enzymes
, pp. 1484-1492
-
-
Colloms, S.D.1
-
20
-
-
0028092164
-
The arginine repressor of escherichia coli
-
Maas, W.K. (1994) The arginine repressor of Escherichia coli. Microbiol. Rev. 58, 631-640
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 631-640
-
-
Maas, W.K.1
-
21
-
-
33745831604
-
Signaling by the arc two-component system provides a link between the redox state of the quinone pool and gene expression
-
Malpica, R., Sandoval, G.R., Rodriguez, C., Franco, B. and Georgellis, D. (2006) Signaling by the arc two-component system provides a link between the redox state of the quinone pool and gene expression. Antioxid. Redox Signaling 8, 781-795
-
(2006)
Antioxid. Redox Signaling
, vol.8
, pp. 781-795
-
-
Malpica, R.1
Sandoval, G.R.2
Rodriguez, C.3
Franco, B.4
Georgellis, D.5
-
22
-
-
0022111794
-
The stereostructure of knots and catenanes produced by phage λ integrative recombination: Implications for mechanism and dna structure
-
Spengler, S.J., Stasiak, A. and Cozzarelli, N.R. (1985) The stereostructure of knots and catenanes produced by phage λ integrative recombination: implications for mechanism and DNA structure. Cell 42, 325-334
-
(1985)
Cell
, vol.42
, pp. 325-334
-
-
Spengler, S.J.1
Stasiak, A.2
Cozzarelli, N.R.3
-
23
-
-
12544251405
-
Tangle analysis of xer recombination reveals only three solutions, all consistent with a single three-dimensional topological pathway
-
Vazquez, M., Colloms, S.D. and Sumners, D.W. (2005) Tangle analysis of Xer recombination reveals only three solutions, all consistent with a single three-dimensional topological pathway. J. Mol. Biol. 346, 493-504
-
(2005)
J. Mol. Biol.
, vol.346
, pp. 493-504
-
-
Vazquez, M.1
Colloms, S.D.2
Sumners, D.W.3
-
24
-
-
84863765426
-
Rational tangle surgery and xer recombination on catenanes
-
Darcy, I.K., Ishihara, K., Medikonduri, R.M. and Shimokawa, K. (2012) Rational tangle surgery and Xer recombination on catenanes. Algebraic Geom. Topol. 12, 1183-1210
-
(2012)
Algebraic Geom. Topol.
, vol.12
, pp. 1183-1210
-
-
Darcy, I.K.1
Ishihara, K.2
Medikonduri, R.M.3
Shimokawa, K.4
-
25
-
-
0009875006
-
-
Ph.D. Thesis, Florida State University, Tallahassee, FL, U.S.A.
-
Vazquez, M.E. (2000) Tangle Analysis of Site-Specific Recombination: Gin and Xer Systems. Ph.D. Thesis, Florida State University, Tallahassee, FL, U.S.A.
-
(2000)
Tangle Analysis of Site-Specific Recombination: Gin and Xer Systems
-
-
Vazquez, M.E.1
-
26
-
-
0032981279
-
Topology of xer recombination on catenanes produced by λ integrase
-
Bath, J., Sherratt, D.J. and Colloms, S.D. (1999) Topology of Xer recombination on catenanes produced by λ integrase. J. Mol. Biol. 289, 873-883
-
(1999)
J. Mol. Biol.
, vol.289
, pp. 873-883
-
-
Bath, J.1
Sherratt, D.J.2
Colloms, S.D.3
-
27
-
-
0021858501
-
Phage p1 cre-loxp site-specific recombination: Effects of dna supercoiling on catenation and knotting of recombinant products
-
Abremski, K. and Hoess, R. (1985) Phage P1 Cre-loxP site-specific recombination: effects of DNA supercoiling on catenation and knotting of recombinant products. J. Mol. Biol. 184, 211-220
-
(1985)
J. Mol. Biol.
, vol.184
, pp. 211-220
-
-
Abremski, K.1
Hoess, R.2
-
28
-
-
0026784978
-
Cre-lox recombination in escherichia coli cells: Mechanistic differences from the in vitro reaction
-
Adams, D.E., Bliska, J.B. and Cozzarelli, N.R. (1992) Cre-lox recombination in Escherichia coli cells: mechanistic differences from the in vitro reaction. J. Mol. Biol. 226, 661-673
-
(1992)
J. Mol. Biol.
, vol.226
, pp. 661-673
-
-
Adams, D.E.1
Bliska, J.B.2
Cozzarelli, N.R.3
-
29
-
-
1942455734
-
Control of cre recombination by regulatory elements from xer recombination systems
-
Gourlay, S.C. and Colloms, S.D. (2004) Control of Cre recombination by regulatory elements from Xer recombination systems. Mol. Microbiol. 52, 53-65
-
(2004)
Mol. Microbiol.
, vol.52
, pp. 53-65
-
-
Gourlay, S.C.1
Colloms, S.D.2
-
30
-
-
33645059937
-
Communication between accessory factors and the cre recombinase at hybrid psi-loxp sites
-
Akopian, A., Gourlay, S., James, H. and Colloms, S.D. (2006) Communication between accessory factors and the Cre recombinase at hybrid psi-loxP sites. J. Mol. Biol. 357, 1394-1408
-
(2006)
J. Mol. Biol.
, vol.357
, pp. 1394-1408
-
-
Akopian, A.1
Gourlay, S.2
James, H.3
Colloms, S.D.4
-
31
-
-
0037099579
-
Accessory factors determine the order of strand exchange in xer recombination at psi
-
Bregu, M., Sherratt, D.J. and Colloms, S.D. (2002) Accessory factors determine the order of strand exchange in Xer recombination at psi. EMBO J. 21, 3888-3897
-
(2002)
EMBO J.
, vol.21
, pp. 3888-3897
-
-
Bregu, M.1
Sherratt, D.J.2
Colloms, S.D.3
-
32
-
-
0344931801
-
X-ray structure of aminopeptidase a from escherichia coli and a model for the nucleoprotein complex in xer site-specific recombination
-
Strater, N., Sherratt, D.J. and Colloms, S.D. (1999) X-ray structure of aminopeptidase A from Escherichia coli and a model for the nucleoprotein complex in Xer site-specific recombination. EMBO J. 18, 4513-4522
-
(1999)
EMBO J.
, vol.18
, pp. 4513-4522
-
-
Strater, N.1
Sherratt, D.J.2
Colloms, S.D.3
-
33
-
-
23744505065
-
Mutagenesis of pepa suggests a new model for the xer/cer synaptic complex
-
Reijns, M., Lu, Y., Leach, S. and Colloms, S.D. (2005) Mutagenesis of PepA suggests a new model for the Xer/cer synaptic complex. Mol. Microbiol. 57, 927-941
-
(2005)
Mol. Microbiol.
, vol.57
, pp. 927-941
-
-
Reijns, M.1
Lu, Y.2
Leach, S.3
Colloms, S.D.4
-
34
-
-
63249100571
-
Insights into the architecture and stoichiometry of escherichia coli pepa-dna complexes involved in transcriptional control and site-specific dna recombination by atomic force microscopy
-
Minh, P.N., Devroede, N., Massant, J., Maes, D. and Charlier, D. (2009) Insights into the architecture and stoichiometry of Escherichia coli PepA-DNA complexes involved in transcriptional control and site-specific DNA recombination by atomic force microscopy. Nucleic Acids Res. 37, 1463-1476
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 1463-1476
-
-
Minh, P.N.1
Devroede, N.2
Massant, J.3
Maes, D.4
Charlier, D.5
-
35
-
-
77953239732
-
Orchestrating serine resolvases
-
Rice, P.A., Mouw, K.W., Montano, S.P., Boocock, M.R., Rowland, S.J. and Stark, W.M. (2010) Orchestrating serine resolvases. Biochem. Soc. Trans. 38, 384-387
-
(2010)
Biochem. Soc. Trans.
, vol.38
, pp. 384-387
-
-
Rice, P.A.1
Mouw, K.W.2
Montano, S.P.3
Boocock, M.R.4
Rowland, S.J.5
Stark, W.M.6
-
36
-
-
33645802381
-
Self-control in dna site-specific recombination mediated by the tyrosine recombinase tnpi
-
Vanhooff, V., Galloy, C., Agaisse, H., Lereclus, D., Revet, B. and Hallet, B. (2006) Self-control in DNA site-specific recombination mediated by the tyrosine recombinase TnpI. Mol. Microbiol. 60, 617-629
-
(2006)
Mol. Microbiol.
, vol.60
, pp. 617-629
-
-
Vanhooff, V.1
Galloy, C.2
Agaisse, H.3
Lereclus, D.4
Revet, B.5
Hallet, B.6
-
37
-
-
0028151069
-
Processive recombination by wild-type gin and an enhancer-independent mutant: Insight into the mechanisms of recombination selectivity and strand exchange
-
Crisona, N.J., Kanaar, R., Gonzalez, T.N., Zechiedrich, E.L., Klippel, A. and Cozzarelli, N.R. (1994) Processive recombination by wild-type Gin and an enhancer-independent mutant: insight into the mechanisms of recombination selectivity and strand exchange. J. Mol. Biol. 243, 437-457
-
(1994)
J. Mol. Biol.
, vol.243
, pp. 437-457
-
-
Crisona, N.J.1
Kanaar, R.2
Gonzalez, T.N.3
Zechiedrich, E.L.4
Klippel, A.5
Cozzarelli, N.R.6
-
39
-
-
1442325402
-
Topological analysis of hin-catalysed dna recombination in vivo and in vitro
-
Merickel, S.K. and Johnson, R.C. (2004) Topological analysis of Hin-catalysed DNA recombination in vivo and in vitro. Mol. Microbiol. 51, 1143-1154
-
(2004)
Mol. Microbiol.
, vol.51
, pp. 1143-1154
-
-
Merickel, S.K.1
Johnson, R.C.2
-
40
-
-
0029670095
-
Structure of the oligomerization and l-Arginine binding domain of the arginine repressor of escherichia coli
-
Van Duyne, G.D., Ghosh, G., Maas, W.K. and Sigler, P.B. (1996) Structure of the oligomerization and L-Arginine binding domain of the arginine repressor of Escherichia coli. J. Mol. Biol. 256, 377-391
-
(1996)
J. Mol. Biol.
, vol.256
, pp. 377-391
-
-
Van Duyne, G.D.1
Ghosh, G.2
Maas, W.K.3
Sigler, P.B.4
-
41
-
-
0030886293
-
Structure of cre recombinase complexed with dna in a site-specific recombination synapse
-
Guo, F., Gopaul, D.N. and van Duyne, G.D. (1997) Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse. Nature 389, 40-46
-
(1997)
Nature
, vol.389
, pp. 40-46
-
-
Guo, F.1
Gopaul, D.N.2
Van Duyne, G.D.3
|