-
1
-
-
0026784978
-
Crelox recombination in Escherichia coli cells. Mechanistic differences from the in vitro reaction
-
Adams, D.E., Bliska, J.B., and Cozzarelli, N.R. (1992) Crelox recombination in Escherichia coli cells. Mechanistic differences from the in vitro reaction. J Mol Biol 226: 661-673.
-
(1992)
J Mol Biol
, vol.226
, pp. 661-673
-
-
Adams, D.E.1
Bliska, J.B.2
Cozzarelli, N.R.3
-
2
-
-
0025600461
-
Direct visualization of supercoiled DNA molecules in solution
-
Adrian, M., ten Heggeler-Bordier, B., Wahli, W., Stasiak, A.Z., Stasiak, A., and Dubochet, J. (1990) Direct visualization of supercoiled DNA molecules in solution. EMBO J 9: 4551-4554.
-
(1990)
EMBO J
, vol.9
, pp. 4551-4554
-
-
Adrian, M.1
Ten Heggeler-Bordier, B.2
Wahli, W.3
Stasiak, A.Z.4
Stasiak, A.5
Dubochet, J.6
-
3
-
-
0025826549
-
Mechanism of Tn3 resolvase recombination in vivo
-
Bliska, J.B., Benjamin, H.W., and Cozzarelli, N.R. (1991) Mechanism of Tn3 resolvase recombination in vivo. J Biol Chem 266: 2041-2047.
-
(1991)
J Biol Chem
, vol.266
, pp. 2041-2047
-
-
Bliska, J.B.1
Benjamin, H.W.2
Cozzarelli, N.R.3
-
4
-
-
0025363121
-
Structure of plectonemically supercoiled DNA
-
Boles, T.C., White, J.H., and Cozzarelli, N.R. (1990) Structure of plectonemically supercoiled DNA. J Mol Biol 213: 931-951.
-
(1990)
J Mol Biol
, vol.213
, pp. 931-951
-
-
Boles, T.C.1
White, J.H.2
Cozzarelli, N.R.3
-
5
-
-
0021258949
-
Phase variation and the Hin protein: In vivo activity measurements, protein overproduction, and purification
-
Bruist, M.F., and Simon, M.I. (1984) Phase variation and the Hin protein: in vivo activity measurements, protein overproduction, and purification. J Bacteriol 159: 71-79.
-
(1984)
J Bacteriol
, vol.159
, pp. 71-79
-
-
Bruist, M.F.1
Simon, M.I.2
-
6
-
-
0028151069
-
Processive recombination by wild-type Gin and an enhancer-independent mutant. Insight into the mechanisms of recombination selectivity and strand exchange
-
Crisona, N.J., Kanaar, R., Gonzalez, T.N., Zechiedrich, E.L., Klippel, A., and Cozzarelli, N.R. (1994) Processive recombination by wild-type Gin and an enhancer-independent mutant. Insight into the mechanisms of recombination selectivity and strand exchange. J Mol Biol 243: 437-457.
-
(1994)
J Mol Biol
, vol.243
, pp. 437-457
-
-
Crisona, N.J.1
Kanaar, R.2
Gonzalez, T.N.3
Zechiedrich, E.L.4
Klippel, A.5
Cozzarelli, N.R.6
-
7
-
-
0035868644
-
Topoisomerase IV, alone, unknots DNA in E. coli
-
Deibler, R.W., Rahmati, S., and Zechiedrich, E.L. (2001) Topoisomerase IV, alone, unknots DNA in E. coli. Genes Dev 15: 748-761.
-
(2001)
Genes Dev
, vol.15
, pp. 748-761
-
-
Deibler, R.W.1
Rahmati, S.2
Zechiedrich, E.L.3
-
8
-
-
0001373485
-
Nalidlxic acid resistance: A second genetic character involved in DNA gyrase activity
-
Gellert, M., Mizuuchi, K., O'Dea, M.H., Itoh, T., and Tomizawa, J.I. (1977) Nalidlxic acid resistance: a second genetic character involved in DNA gyrase activity. Proc Natl Acad Sci USA 74: 4772-4776.
-
(1977)
Proc Natl Acad Sci USA
, vol.74
, pp. 4772-4776
-
-
Gellert, M.1
Mizuuchi, K.2
O'Dea, M.H.3
Itoh, T.4
Tomizawa, J.I.5
-
9
-
-
0000239937
-
Bacterial DNA inversion systems
-
Berg, D.E., and Howe, M.M. (eds). Washington, DC: American Society for Microbiology Press
-
Glasgow, A.C., Hughes, K.T., and Simon, M.I. (1989) Bacterial DNA inversion systems. In Mobile DNA. Berg, D.E., and Howe, M.M. (eds). Washington, DC: American Society for Microbiology Press, pp. 637-659.
-
(1989)
Mobile DNA
, pp. 637-659
-
-
Glasgow, A.C.1
Hughes, K.T.2
Simon, M.I.3
-
10
-
-
85158006363
-
The movement of Tn3-like elements: Transposition and cointegrate resolution
-
Craig, N.L., Craigie, R., Gellert, M., and Lambowitz, A.M. (eds). Washington, DC: American Society for Microbiology Press
-
Grindley, N.D.F. (2002) The movement of Tn3-like elements: transposition and cointegrate resolution. In Mobile DNA II. Craig, N.L., Craigie, R., Gellert, M., and Lambowitz, A.M. (eds). Washington, DC: American Society for Microbiology Press, pp. 272-302.
-
(2002)
Mobile DNA II
, pp. 272-302
-
-
Grindley, N.D.F.1
-
11
-
-
0030087849
-
The Hin dimer interface is critical for Fis-mediated activation of the catalytic steps of site-specific DNA inversion
-
Haykinson, M.J., Johnson, L.M., Soong, J., and Johnson, R.C. (1996) The Hin dimer interface is critical for Fis-mediated activation of the catalytic steps of site-specific DNA inversion. Curr Biol 6: 163-177.
-
(1996)
Curr Biol
, vol.6
, pp. 163-177
-
-
Haykinson, M.J.1
Johnson, L.M.2
Soong, J.3
Johnson, R.C.4
-
12
-
-
0025040403
-
The Hin invertasome: Protein-mediated joining of distant recombination sites at the enhancer
-
Heichman, K.A., and Johnson, R.C. (1990) The Hin invertasome: protein-mediated joining of distant recombination sites at the enhancer. Science 249: 511-517.
-
(1990)
Science
, vol.249
, pp. 511-517
-
-
Heichman, K.A.1
Johnson, R.C.2
-
13
-
-
0025953301
-
Configuration of DNA strands and mechanism of strand exchange in the Hin invertasome as revealed by analysis of recombinant knots
-
Heichman, K.A., Moskowitz, I.P., and Johnson, R.C. (1991) Configuration of DNA strands and mechanism of strand exchange in the Hin invertasome as revealed by analysis of recombinant knots. Genes Dev 5: 1622-1634.
-
(1991)
Genes Dev
, vol.5
, pp. 1622-1634
-
-
Heichman, K.A.1
Moskowitz, I.P.2
Johnson, R.C.3
-
14
-
-
0024059137
-
Phase variation in Salmonella: Analysis of Hin recombinase and hix recombination site interaction in vivo
-
Hughes, K.T., Youderian, P., and Simon, M.I. (1988) Phase variation in Salmonella: analysis of Hin recombinase and hix recombination site interaction in vivo. Genes Dev 2: 937-948.
-
(1988)
Genes Dev
, vol.2
, pp. 937-948
-
-
Hughes, K.T.1
Youderian, P.2
Simon, M.I.3
-
15
-
-
0026748747
-
Sequence-specific interaction of the Salmonella Hin recombinase in both major and minor grooves of DNA
-
Hughes, K.T., Gaines, P.C., Karlinsey, J.E., Vinayak, R., and Simon, M.I. (1992) Sequence-specific interaction of the Salmonella Hin recombinase in both major and minor grooves of DNA. EMBO J 11: 2695-2705.
-
(1992)
EMBO J
, vol.11
, pp. 2695-2705
-
-
Hughes, K.T.1
Gaines, P.C.2
Karlinsey, J.E.3
Vinayak, R.4
Simon, M.I.5
-
16
-
-
0022482112
-
Localized conversion at the crossover sequences in the site-specific DNA inversion system of bacteriophage P1
-
Iida, S., and Hiestand-Nauer, R. (1986) Localized conversion at the crossover sequences in the site-specific DNA inversion system of bacteriophage P1. Cell 45: 71-79.
-
(1986)
Cell
, vol.45
, pp. 71-79
-
-
Iida, S.1
Hiestand-Nauer, R.2
-
17
-
-
85157968632
-
Bacterial site-specific DNA inversion systems
-
Craig, N.L., Craigie, R., Gellert, M., and Lambowitz, A.M. (eds). Washington, DC: American Society for Microbiology Press
-
Johnson, R.C. (2002) Bacterial site-specific DNA inversion systems. In Mobile DNA II. Craig, N.L., Craigie, R., Gellert, M., and Lambowitz, A.M. (eds). Washington, DC: American Society for Microbiology Press, pp. 230-271.
-
(2002)
Mobile DNA II
, pp. 230-271
-
-
Johnson, R.C.1
-
18
-
-
0024343548
-
Intermediates in Hin-mediated DNA inversion: A role for Fis and the recombinational enhancer in the strand exchange reaction
-
Johnson, B.C., and Bruist, M.F. (1989) Intermediates in Hin-mediated DNA inversion: a role for Fis and the recombinational enhancer in the strand exchange reaction. EMBO J 8: 1581-1590.
-
(1989)
EMBO J
, vol.8
, pp. 1581-1590
-
-
Johnson, B.C.1
Bruist, M.F.2
-
19
-
-
0022006792
-
Hin-mediated site-specific recombination requires two 26 bp recombination sites and a 60 bp recombinational enhancer
-
Johnson, R.C., and Simon, M.I. (1985) Hin-mediated site-specific recombination requires two 26 bp recombination sites and a 60 bp recombinational enhancer. Cell 41: 781-791.
-
(1985)
Cell
, vol.41
, pp. 781-791
-
-
Johnson, R.C.1
Simon, M.I.2
-
20
-
-
0021646262
-
In vitro analysis of Hin-mediated site-specific recombination
-
Johnson, R.C., Bruist, M.F., Glaccum, M.B., and Simon, M.I. (1984) In vitro analysis of Hin-mediated site-specific recombination. Cold Spring Harbor Symp Quant Biol 49: 751-760.
-
(1984)
Cold Spring Harbor Symp Quant Biol
, vol.49
, pp. 751-760
-
-
Johnson, R.C.1
Bruist, M.F.2
Glaccum, M.B.3
Simon, M.I.4
-
21
-
-
0021952570
-
G inversion in bacteriophage Mu DNA is stimulated by a site within the invertase gene and a host factor
-
Kahmann, R., Rudt, F., Koch, C., and Mertens, G. (1985) G inversion in bacteriophage Mu DNA is stimulated by a site within the invertase gene and a host factor. Cell 41: 771-780.
-
(1985)
Cell
, vol.41
, pp. 771-780
-
-
Kahmann, R.1
Rudt, F.2
Koch, C.3
Mertens, G.4
-
22
-
-
2642609804
-
The mechanism of G inversion
-
McMacken, R.A., and Kelly, T.J. (eds). New York: Liss
-
Kahmann, R., Mertens, G., Klippel, A., Brauer, B., Rudt, R., and Koch, C. (1987) The mechanism of G inversion. In DNA Replication and Recombination, UCLA Symposium on Molecular and Cellular Biology, Vol. 47. McMacken, R.A., and Kelly, T.J. (eds). New York: Liss, pp. 681-690.
-
(1987)
DNA Replication and Recombination, UCLA Symposium on Molecular and Cellular Biology
, vol.47
, pp. 681-690
-
-
Kahmann, R.1
Mertens, G.2
Klippel, A.3
Brauer, B.4
Rudt, R.5
Koch, C.6
-
23
-
-
0001731921
-
Roles of supercoiled DNA structure in DNA transactions
-
Kanaar, R., and Cozzarelli, N.R. (1992) Roles of supercoiled DNA structure in DNA transactions. Curr Opin Struct Biol 2: 369-379.
-
(1992)
Curr Opin Struct Biol
, vol.2
, pp. 369-379
-
-
Kanaar, R.1
Cozzarelli, N.R.2
-
24
-
-
0023864702
-
Gin-mediated DNA inversion: Product structure and the mechanism of strand exchange
-
Kanaar, R., van de Putte, P., and Cozzarelli, N.R. (1988) Gin-mediated DNA inversion: product structure and the mechanism of strand exchange. Proc Natl Acad Sci USA 85: 752-756.
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 752-756
-
-
Kanaar, R.1
Van De Putte, P.2
Cozzarelli, N.R.3
-
25
-
-
0025376429
-
Processive recombination by the phage Mu Gin system: Implications for the mechanisms of DNA strand exchange, DNA site alignment, and enhancer action
-
Kanaar, R., Klippel, A., Shekhtman, E., Dungan, J.M., Kahmann, R., and Cozzarelli, N.R. (1990) Processive recombination by the phage Mu Gin system: implications for the mechanisms of DNA strand exchange, DNA site alignment, and enhancer action. Cell 62: 353-366.
-
(1990)
Cell
, vol.62
, pp. 353-366
-
-
Kanaar, R.1
Klippel, A.2
Shekhtman, E.3
Dungan, J.M.4
Kahmann, R.5
Cozzarelli, N.R.6
-
26
-
-
0029587675
-
Topoisomerase IV is a target of quinolones in Escherichia coli
-
Khodursky, A.B., Zechiedrich, E.L., and Cozzarelli, N.R. (1995) Topoisomerase IV is a target of quinolones in Escherichia coli. Proc Natl Acad Sci USA 92: 11801-11805.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 11801-11805
-
-
Khodursky, A.B.1
Zechiedrich, E.L.2
Cozzarelli, N.R.3
-
27
-
-
0023993335
-
The DNa invertase Gin of phage Mu: Formation of a covalent complex with DNa via a phosphoserine at amino acid position 9
-
Klippel, A., Mertens, G., Patschinsky, T., and Kahmann, R. (1988) The DNA invertase Gin of phage Mu: formation of a covalent complex with DNA via a phosphoserine at amino acid position 9. EMBO J 7: 1229-1237.
-
(1988)
EMBO J
, vol.7
, pp. 1229-1237
-
-
Klippel, A.1
Mertens, G.2
Patschinsky, T.3
Kahmann, R.4
-
28
-
-
0009542224
-
The invertible G segment
-
Symonds, N., Toussaint, A., van de Putte, P., and Howe, M.M. (eds). Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Koch, C., Mertens, G., Rudt, F., Kahmann, R., Kanaar, R., Plasterk, R.H., et al. (1987) The invertible G segment. In Phage Mu. Symonds, N., Toussaint, A., van de Putte, P., and Howe, M.M. (eds). Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press, pp. 75-91.
-
(1987)
Phage Mu
, pp. 75-91
-
-
Koch, C.1
Mertens, G.2
Rudt, F.3
Kahmann, R.4
Kanaar, R.5
Plasterk, R.H.6
-
29
-
-
0024297575
-
Curved helix segments can uniquely orient the topology of supertwisted DNA
-
Laundon, C.H., and Griffith, J.D. (1988) Curved helix segments can uniquely orient the topology of supertwisted DNA. Cell 52: 545-549.
-
(1988)
Cell
, vol.52
, pp. 545-549
-
-
Laundon, C.H.1
Griffith, J.D.2
-
30
-
-
0004136246
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Maniatis, T., Fritsch, E.F., and Sambrook, J. (1982) Molecular Cloning: a Laboratory Manual. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
-
(1982)
Molecular Cloning: A Laboratory Manual
-
-
Maniatis, T.1
Fritsch, E.F.2
Sambrook, J.3
-
31
-
-
0032167803
-
Communication between Hin recombinase and Fis regulatory subunits during coordinate activation of Hincatalyzed site-specific DNA inversion
-
Merickel, S.K., Haykinson, M.J., and Johnson, R.C. (1998) Communication between Hin recombinase and Fis regulatory subunits during coordinate activation of Hincatalyzed site-specific DNA inversion. Genes Dev 12: 2803-2816.
-
(1998)
Genes Dev
, vol.12
, pp. 2803-2816
-
-
Merickel, S.K.1
Haykinson, M.J.2
Johnson, R.C.3
-
32
-
-
0025952376
-
Alignment of recombination sites in Hin-mediated site-specific DNA recombination
-
Moskowitz, I.P., Heichman, K.A., and Johnson, R.C. (1991) Alignment of recombination sites in Hin-mediated site-specific DNA recombination. Genes Dev 5: 1635-1645.
-
(1991)
Genes Dev
, vol.5
, pp. 1635-1645
-
-
Moskowitz, I.P.1
Heichman, K.A.2
Johnson, R.C.3
-
33
-
-
0028209323
-
Model for a DNA-mediated synaptic complex suggested by crystal packing of gamma delta resolvase subunits
-
Rice, P.A., and Steitz, T.A. (1994) Model for a DNA-mediated synaptic complex suggested by crystal packing of gamma delta resolvase subunits. EMBO J 13: 1514-1524.
-
(1994)
EMBO J
, vol.13
, pp. 1514-1524
-
-
Rice, P.A.1
Steitz, T.A.2
-
34
-
-
0030842186
-
The transactivation region of the Fis protein that controls site-specific DNA inversion contains extended mobile beta-hairpin arms
-
Safo, M.K., Yang, W.Z., Corselli, L., Cramton, S.E., Yuan, H.S., and Johnson, R.C. (1997) The transactivation region of the Fis protein that controls site-specific DNA inversion contains extended mobile beta-hairpin arms. EMBO J 16: 6860-6873.
-
(1997)
EMBO J
, vol.16
, pp. 6860-6873
-
-
Safo, M.K.1
Yang, W.Z.2
Corselli, L.3
Cramton, S.E.4
Yuan, H.S.5
Johnson, R.C.6
-
35
-
-
0001070790
-
Tn3 and related transposable elements: Site-specific recombination and transposition
-
Berg, D.E., and Howe, M.M. (eds). Washington, DC: American Society for Microbiology Press
-
Sherratt, D. (1989) Tn3 and related transposable elements: site-specific recombination and transposition. In Mobile DNA. Berg, D.E., and Howe, M.M. (eds). Washington, DC: American Society for Microbiology Press, pp. 163-184.
-
(1989)
Mobile DNA
, pp. 163-184
-
-
Sherratt, D.1
-
36
-
-
0024364817
-
Site-specific recombination by Tn3 resolvase: Topological changes in the forward and reverse reactions
-
Stark, W.M., Sherratt, D.J., and Boocock, M.R. (1989) Site-specific recombination by Tn3 resolvase: topological changes in the forward and reverse reactions. Cell 58: 779-790.
-
(1989)
Cell
, vol.58
, pp. 779-790
-
-
Stark, W.M.1
Sherratt, D.J.2
Boocock, M.R.3
-
37
-
-
0025946533
-
Resolvase-catalysed reactions between res sites differing in the central dinucleotide of subsite I
-
Stark, W.M., Grindley, N.D., Hatfull, G.F., and Boocock, M.R. (1991) Resolvase-catalysed reactions between res sites differing in the central dinucleotide of subsite I. EMBO J 10: 3541-3548.
-
(1991)
EMBO J
, vol.10
, pp. 3541-3548
-
-
Stark, W.M.1
Grindley, N.D.2
Hatfull, G.F.3
Boocock, M.R.4
-
38
-
-
0026481250
-
Catalysis by site-specific recombinases
-
Stark, W.M., Boocock, M.R., and Sherratt, D.J. (1992) Catalysis by site-specific recombinases. Trends Genet 8: 432-439.
-
(1992)
Trends Genet
, vol.8
, pp. 432-439
-
-
Stark, W.M.1
Boocock, M.R.2
Sherratt, D.J.3
-
39
-
-
0001534829
-
Mechanism of action of nalidixic acid: Purification of Escherichia coli nalA gene product and its relationship to DNA gyrase and a novel nicking-closing enzyme
-
Sugino, A., Peebles, C.L., Kreuzer, K.N., and Cozzarelli, N.R. (1977) Mechanism of action of nalidixic acid: purification of Escherichia coli nalA gene product and its relationship to DNA gyrase and a novel nicking-closing enzyme. Proc Natl Acad Sci USA 74: 4767-4771.
-
(1977)
Proc Natl Acad Sci USA
, vol.74
, pp. 4767-4771
-
-
Sugino, A.1
Peebles, C.L.2
Kreuzer, K.N.3
Cozzarelli, N.R.4
-
40
-
-
0021972652
-
Discovery of a predicted DNA knot substantiates a model for site-specific recombination
-
Wasserman, S.A., Dungan, J.M., and Cozzarelli, N.R. (1985) Discovery of a predicted DNA knot substantiates a model for site-specific recombination. Science 229: 171-174.
-
(1985)
Science
, vol.229
, pp. 171-174
-
-
Wasserman, S.A.1
Dungan, J.M.2
Cozzarelli, N.R.3
-
41
-
-
0031713107
-
Conversion of a beta-strand to an alpha-helix induced by a single-site mutation observed in the crystal structure of Fis mutant Pro26Ala
-
Yang, W.Z., Ko, T.P., Corselli, L., Johnson, R.C., and Yuan, H.S. (1998) Conversion of a beta-strand to an alpha-helix induced by a single-site mutation observed in the crystal structure of Fis mutant Pro26Ala. Protein Sci 7: 1875-1883.
-
(1998)
Protein Sci
, vol.7
, pp. 1875-1883
-
-
Yang, W.Z.1
Ko, T.P.2
Corselli, L.3
Johnson, R.C.4
Yuan, H.S.5
|