A data parallel strategy for aligning multiple biological sequences on multi-core computers

Computers in Biology and Medicine

Volumn 43, Issue 4, 2013, Pages 350-361

  Zhu, Xiangyuan ^a,b   Li, Kenli ^a   Salah, Ahmad ^a,c  

^a HUNAN UNIVERSITY   (China)

^b ZHAOQING UNIVERSITY   (China)

^c Zagazig University   (Egypt)

Author keywords

Biological sequences; Clustering; Data parallelism; Multi core; Multiple sequence alignment; Parallel algorithm

Indexed keywords

BIOLOGICAL SEQUENCES; CLUSTERING; DATA PARALLELISM; MULTI CORE; MULTIPLE SEQUENCE ALIGNMENTS;

BIOINFORMATICS; CLUSTERING ALGORITHMS; PARALLEL ALGORITHMS;

PARALLEL ARCHITECTURES;

STRUCTURAL PROTEIN;

ACCURACY; ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; COMPARATIVE STUDY; HIGH THROUGHPUT SEQUENCING; MULTIGENE FAMILY; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DOMAIN; QUALITY CONTROL; SEQUENCE ALIGNMENT; SYSTEM ANALYSIS;

ALGORITHMS; CLUSTER ANALYSIS; COMPUTATIONAL BIOLOGY; HUMANS; REPRODUCIBILITY OF RESULTS; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, PROTEIN; SOFTWARE;

EID: 84875376355     PISSN: 00104825     EISSN: 18790534     Source Type: Journal    
DOI: 10.1016/j.compbiomed.2012.12.009     Document Type: Article

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