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Volumn 14, Issue 1, 2013, Pages

Construction of a plant-transformation-competent BIBAC library and genome sequence analysis of polyploid Upland cotton (Gossypium hirsutum L.)

Author keywords

BIBAC end sequence (BES); BIBAC library; Genome evolution; Gossypium hirsutum; Gossypium raimondii; Polyploidization and evolution; SSR

Indexed keywords

CELLULOSE; FATTY ACID; PLANT DNA;

EID: 84875313193     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-14-208     Document Type: Article
Times cited : (16)

References (65)
  • 1
    • 0000224426 scopus 로고
    • Phylogenetics of the cotton genus (Gossypium L.): Character-state weighted parsimony analysis of chloroplast DNA restriction site data and its systematic and biogeographic implications
    • Wendel JF, Albert VA. Phylogenetics of the cotton genus (Gossypium L.): Character-state weighted parsimony analysis of chloroplast DNA restriction site data and its systematic and biogeographic implications. Syst Bot 1992, 17:115-143.
    • (1992) Syst Bot , vol.17 , pp. 115-143
    • Wendel, J.F.1    Albert, V.A.2
  • 2
    • 0030733827 scopus 로고    scopus 로고
    • Congruence and consensus in the cotton tribe
    • Seelanan T, Schnabel A, Wendel JF. Congruence and consensus in the cotton tribe. Syst Bot 1997, 22:259-290.
    • (1997) Syst Bot , vol.22 , pp. 259-290
    • Seelanan, T.1    Schnabel, A.2    Wendel, J.F.3
  • 3
    • 0032229478 scopus 로고    scopus 로고
    • The tortoise and the hare: choosing between noncoding plastome and nuclear Adh sequences for phylogeny reconstruction in a recently diverged plant group
    • Small RL, Ryburn JA, Cronn RC, Seelanan T, Wendel JF. The tortoise and the hare: choosing between noncoding plastome and nuclear Adh sequences for phylogeny reconstruction in a recently diverged plant group. Amer J Bot 1998, 85:1301-1315.
    • (1998) Amer J Bot , vol.85 , pp. 1301-1315
    • Small, R.L.1    Ryburn, J.A.2    Cronn, R.C.3    Seelanan, T.4    Wendel, J.F.5
  • 4
    • 36148975768 scopus 로고    scopus 로고
    • Polyploidy and the evolutionary history of cotton
    • Wendel JF, Cronn RC. Polyploidy and the evolutionary history of cotton. Adv Agron 2003, 87:139-186.
    • (2003) Adv Agron , vol.87 , pp. 139-186
    • Wendel, J.F.1    Cronn, R.C.2
  • 5
    • 78049405533 scopus 로고    scopus 로고
    • Numbers of genes in the NBS and RLK families vary by more than four-fold within a plant species and are regulated by multiple factors
    • 10.1093/nar/gkq524, 2965241, 20542917
    • Zhang MP, Wu Y-H, Lee M-K, Liu Y-H, Rong Y, Santos FS, Wu C-C, Xie F, Nelson RL, Zhang H-B. Numbers of genes in the NBS and RLK families vary by more than four-fold within a plant species and are regulated by multiple factors. Nucleic Acids Res 2010, 38:6513-6525. 10.1093/nar/gkq524, 2965241, 20542917.
    • (2010) Nucleic Acids Res , vol.38 , pp. 6513-6525
    • Zhang, M.P.1    Wu, Y.-H.2    Lee, M.-K.3    Liu, Y.-H.4    Rong, Y.5    Santos, F.S.6    Wu, C.-C.7    Xie, F.8    Nelson, R.L.9    Zhang, H.-B.10
  • 6
    • 0029970864 scopus 로고    scopus 로고
    • Higher plants contain homologs of the bacterial celA genes encoding the catalytic subunit of cellulose synthase
    • 10.1073/pnas.93.22.12637, 38045, 8901635
    • Pear JR, Kawagoe Y, Schreckengost WE, Delmer DP, Stalker DM. Higher plants contain homologs of the bacterial celA genes encoding the catalytic subunit of cellulose synthase. Proc Natl Acad Sci USA 1996, 93:12637-12642. 10.1073/pnas.93.22.12637, 38045, 8901635.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 12637-12642
    • Pear, J.R.1    Kawagoe, Y.2    Schreckengost, W.E.3    Delmer, D.P.4    Stalker, D.M.5
  • 7
    • 0033499327 scopus 로고    scopus 로고
    • Cellulose biosynthesis: exciting times for a difficult field of study
    • 10.1146/annurev.arplant.50.1.245, 15012210
    • Delmer DP. Cellulose biosynthesis: exciting times for a difficult field of study. Annu Rev Plant Physiol Plant Mol Biol 1999, 50:245-276. 10.1146/annurev.arplant.50.1.245, 15012210.
    • (1999) Annu Rev Plant Physiol Plant Mol Biol , vol.50 , pp. 245-276
    • Delmer, D.P.1
  • 8
    • 0033792207 scopus 로고    scopus 로고
    • The cellulose synthase superfamily
    • 10.1104/pp.124.2.495, 1539280, 11027699
    • Richmond TA, Somerville CR. The cellulose synthase superfamily. Plant Physiol 2000, 124:495-498. 10.1104/pp.124.2.495, 1539280, 11027699.
    • (2000) Plant Physiol , vol.124 , pp. 495-498
    • Richmond, T.A.1    Somerville, C.R.2
  • 9
    • 69049105570 scopus 로고    scopus 로고
    • The cellulose synthase superfamily in fully sequenced plants and algae
    • 10.1186/1471-2229-9-99, 3091534, 19646250
    • Yin Y, Huang J, Xu Y. The cellulose synthase superfamily in fully sequenced plants and algae. BMC Plant Biol 2009, 9:99. 10.1186/1471-2229-9-99, 3091534, 19646250.
    • (2009) BMC Plant Biol , vol.9 , pp. 99
    • Yin, Y.1    Huang, J.2    Xu, Y.3
  • 11
    • 0035706425 scopus 로고    scopus 로고
    • Development of genomic resources for cotton (Gossypium hirsutum L.): BAC library construction, preliminary STC analysis, and identification of clones associated with fiber development
    • Tomkins JP, Peterson DG, Yang TJ, Main D, Wilkins TA, Paterson AH, Wing RA. Development of genomic resources for cotton (Gossypium hirsutum L.): BAC library construction, preliminary STC analysis, and identification of clones associated with fiber development. Mol Breed 2001, 8:255-261.
    • (2001) Mol Breed , vol.8 , pp. 255-261
    • Tomkins, J.P.1    Peterson, D.G.2    Yang, T.J.3    Main, D.4    Wilkins, T.A.5    Paterson, A.H.6    Wing, R.A.7
  • 12
    • 58149338551 scopus 로고    scopus 로고
    • BAC library construction and characterization of Suyuan7235, a cotton germplasm with high fiber strength
    • Wang XF, Jun MA, Ma ZY, Zhang GY, Zheng YM. BAC library construction and characterization of Suyuan7235, a cotton germplasm with high fiber strength. J Cotton Sci 2006, 18:200-203.
    • (2006) J Cotton Sci , vol.18 , pp. 200-203
    • Wang, X.F.1    Jun, M.A.2    Ma, Z.Y.3    Zhang, G.Y.4    Zheng, Y.M.5
  • 13
    • 33645567127 scopus 로고    scopus 로고
    • Construction and identification of bacterial artificial chromosome library for 0-613-2R in upland cotton
    • Yin J-M, Guo W-Z, Zhang T-Z. Construction and identification of bacterial artificial chromosome library for 0-613-2R in upland cotton. J Integrat Plant Biol 2006, 48:219-222.
    • (2006) J Integrat Plant Biol , vol.48 , pp. 219-222
    • Yin, J.-M.1    Guo, W.-Z.2    Zhang, T.-Z.3
  • 14
    • 58149350254 scopus 로고    scopus 로고
    • Construction of a bacterial artificial chromosome library of TM-1, a standard line for genetics and genomics in Upland cotton
    • 10.1111/j.1744-7909.2008.00773.x, 19166501
    • Hu Y, Guo WZ, Zhang TZ. Construction of a bacterial artificial chromosome library of TM-1, a standard line for genetics and genomics in Upland cotton. J Integr Plant Biol 2009, 51:107-112. 10.1111/j.1744-7909.2008.00773.x, 19166501.
    • (2009) J Integr Plant Biol , vol.51 , pp. 107-112
    • Hu, Y.1    Guo, W.Z.2    Zhang, T.Z.3
  • 15
    • 34247380203 scopus 로고    scopus 로고
    • Construction and characterization of the first bacterial artificial chromosome library for the cotton species Gossypium barbadense L
    • 10.1139/g06-113, 17426754
    • Wang XF, Ma J, Wang WS, Zheng YM, Zhang GY, Liu CJ, Ma ZY. Construction and characterization of the first bacterial artificial chromosome library for the cotton species Gossypium barbadense L. Genome 2006, 49:1393-1398. 10.1139/g06-113, 17426754.
    • (2006) Genome , vol.49 , pp. 1393-1398
    • Wang, X.F.1    Ma, J.2    Wang, W.S.3    Zheng, Y.M.4    Zhang, G.Y.5    Liu, C.J.6    Ma, Z.Y.7
  • 17
    • 0029838526 scopus 로고    scopus 로고
    • Stable transfer of intact high molecular weight DNA into plant chromosomes
    • 10.1073/pnas.93.18.9975, 38540, 8790442
    • Hamilton CM, Frary A, Lewis C, Tanksley SD. Stable transfer of intact high molecular weight DNA into plant chromosomes. Proc Natl Acad Sci USA 1996, 93:9975-9979. 10.1073/pnas.93.18.9975, 38540, 8790442.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 9975-9979
    • Hamilton, C.M.1    Frary, A.2    Lewis, C.3    Tanksley, S.D.4
  • 18
    • 0035078455 scopus 로고    scopus 로고
    • Efficiency and stability of high molecular weight DNA transformation: an analysis in tomato
    • 10.1023/A:1008924726270, 11305359
    • Frary A, Hamilton CM. Efficiency and stability of high molecular weight DNA transformation: an analysis in tomato. Transgenic Res 2001, 10:121-132. 10.1023/A:1008924726270, 11305359.
    • (2001) Transgenic Res , vol.10 , pp. 121-132
    • Frary, A.1    Hamilton, C.M.2
  • 19
    • 0033064264 scopus 로고    scopus 로고
    • Complementation of plant mutants with large genomic DNA fragments by a transformation-competent artificial chromosome vector accelerates positional cloning
    • 10.1073/pnas.96.11.6535, 26917, 10339623
    • Liu Y-G, Shirano Y, Fukaki H, Yanai Y, Tasaka M, Tabata S, Shibata D. Complementation of plant mutants with large genomic DNA fragments by a transformation-competent artificial chromosome vector accelerates positional cloning. Proc Natl Acad Sci USA 1999, 96:6535-6540. 10.1073/pnas.96.11.6535, 26917, 10339623.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 6535-6540
    • Liu, Y.-G.1    Shirano, Y.2    Fukaki, H.3    Yanai, Y.4    Tasaka, M.5    Tabata, S.6    Shibata, D.7
  • 20
    • 0037045418 scopus 로고    scopus 로고
    • Development of new transformation-competent artificial chromosome vectors and rice genomic libraries for efficient gene cloning
    • 10.1016/S0378-1119(01)00849-6, 11814697
    • Liu Y-G, Liu H, Chen L, Qiu W, Zhang Q, Wu H, Yang C, Su J, Wang Z, Tian D, Mei M. Development of new transformation-competent artificial chromosome vectors and rice genomic libraries for efficient gene cloning. Gene 2002, 282:247-255. 10.1016/S0378-1119(01)00849-6, 11814697.
    • (2002) Gene , vol.282 , pp. 247-255
    • Liu, Y.-G.1    Liu, H.2    Chen, L.3    Qiu, W.4    Zhang, Q.5    Wu, H.6    Yang, C.7    Su, J.8    Wang, Z.9    Tian, D.10    Mei, M.11
  • 21
    • 0242577507 scopus 로고    scopus 로고
    • Construction of a genomic library of wild rice and Agrobacterium-mediated transformation of large-insert DNA linked to BPH resistance locus
    • He R-F, Wang Y, Shi Z, Ren X, Zhu L, Weng Q, He G-C. Construction of a genomic library of wild rice and Agrobacterium-mediated transformation of large-insert DNA linked to BPH resistance locus. Gene 2003, 321:113-121.
    • (2003) Gene , vol.321 , pp. 113-121
    • He, R.-F.1    Wang, Y.2    Shi, Z.3    Ren, X.4    Zhu, L.5    Weng, Q.6    He, G.-C.7
  • 22
    • 79961186135 scopus 로고    scopus 로고
    • A plant-transformation-ready large-insert BIBAC library of Arabidopsis and bombardment transformation and expression of its large-insert BIBACs in tobacco
    • 10.1139/g11-011, 21585277
    • Chang Y-L, Chuang H-W, Meksem K, Wu F-C, Chang C-Y, Zhang MP, Zhang H-B. A plant-transformation-ready large-insert BIBAC library of Arabidopsis and bombardment transformation and expression of its large-insert BIBACs in tobacco. Genome 2011, 54:437-447. 10.1139/g11-011, 21585277.
    • (2011) Genome , vol.54 , pp. 437-447
    • Chang, Y.-L.1    Chuang, H.-W.2    Meksem, K.3    Wu, F.-C.4    Chang, C.-Y.5    Zhang, M.P.6    Zhang, H.-B.7
  • 23
    • 79961187817 scopus 로고    scopus 로고
    • Map-based cloning of genes and quantitative trait loci
    • New Hampshire: Science Publishers, Kole C, Abbott AG
    • Zhang H-B. Map-based cloning of genes and quantitative trait loci. Principles and Practices of Plant Genomics, Vol.1: Genome Mapping 2007, 229-267. New Hampshire: Science Publishers, Kole C, Abbott AG.
    • (2007) Principles and Practices of Plant Genomics, Vol.1: Genome Mapping , pp. 229-267
    • Zhang, H.-B.1
  • 24
    • 16644362056 scopus 로고    scopus 로고
    • Expression of the sorghum 10-member Kafirin gene cluster in maize endosperm
    • 10.1093/nar/gnh183, 545481, 15625231
    • Song R, Segal G, Messing J. Expression of the sorghum 10-member Kafirin gene cluster in maize endosperm. Nucleic Acids Res 2004, 32:e189. 10.1093/nar/gnh183, 545481, 15625231.
    • (2004) Nucleic Acids Res , vol.32
    • Song, R.1    Segal, G.2    Messing, J.3
  • 25
    • 23244455953 scopus 로고    scopus 로고
    • Estimation of the nuclear DNA content of Gossypium species
    • 10.1093/aob/mci078, 15701660
    • Hendrix B, Stewart JM. Estimation of the nuclear DNA content of Gossypium species. Ann Bot 2005, 95:789-797. 10.1093/aob/mci078, 15701660.
    • (2005) Ann Bot , vol.95 , pp. 789-797
    • Hendrix, B.1    Stewart, J.M.2
  • 26
    • 0026951225 scopus 로고
    • Effective vectors for transformation, expression of heterologous genes, and assaying transposon excision in transgenic plants
    • 10.1007/BF02525170, 1338696
    • Jones JDG, Shlumukov L, Carland F, English J, Scofield SR, Bishop GJ, Harrison K. Effective vectors for transformation, expression of heterologous genes, and assaying transposon excision in transgenic plants. Transgenic Res 1992, 1:285-297. 10.1007/BF02525170, 1338696.
    • (1992) Transgenic Res , vol.1 , pp. 285-297
    • Jones, J.D.G.1    Shlumukov, L.2    Carland, F.3    English, J.4    Scofield, S.R.5    Bishop, G.J.6    Harrison, K.7
  • 27
    • 0032212165 scopus 로고    scopus 로고
    • Cloning and stable maintenance of DNA fragments over 300 kb in Escherichia coli with conventional plasmid-based vectors
    • 10.1093/nar/26.21.4901, 147936, 9776751
    • Tao Q, Zhang H-B. Cloning and stable maintenance of DNA fragments over 300 kb in Escherichia coli with conventional plasmid-based vectors. Nucleic Acids Res 1998, 26:4901-4909. 10.1093/nar/26.21.4901, 147936, 9776751.
    • (1998) Nucleic Acids Res , vol.26 , pp. 4901-4909
    • Tao, Q.1    Zhang, H.-B.2
  • 28
    • 0033792906 scopus 로고    scopus 로고
    • Two large-insert soybean genomic libraries constructed in a binary vector: Applications in chromosome walking and genome-wide physical mapping
    • Meksem K, Ruben E, Zobrist K, Hyten D, Tao Q, Zhang H-B, Lightfoot DA. Two large-insert soybean genomic libraries constructed in a binary vector: Applications in chromosome walking and genome-wide physical mapping. Theor Appl Genet 2000, 101:747-755.
    • (2000) Theor Appl Genet , vol.101 , pp. 747-755
    • Meksem, K.1    Ruben, E.2    Zobrist, K.3    Hyten, D.4    Tao, Q.5    Zhang, H.-B.6    Lightfoot, D.A.7
  • 29
    • 0034007547 scopus 로고    scopus 로고
    • A binary vector-based large insert library for Brassica napus and identification of clones linked to a fertility restorer locus for Ogura cytoplasmic male sterility (CMS)
    • Wu Y, Tulsieram L, Tao Q, Zhang H-B, Rothstein SJ. A binary vector-based large insert library for Brassica napus and identification of clones linked to a fertility restorer locus for Ogura cytoplasmic male sterility (CMS). Genome 2000, 43:102-109.
    • (2000) Genome , vol.43 , pp. 102-109
    • Wu, Y.1    Tulsieram, L.2    Tao, Q.3    Zhang, H.-B.4    Rothstein, S.J.5
  • 30
    • 0035114312 scopus 로고    scopus 로고
    • A bacterial artificial chromosome library of Lotus japonicus constructed in an Agrobacterium tumefaciens- transformable vector
    • 10.1094/MPMI.2001.14.3.422, 11277441
    • Men AE, Meksem K, Kassem MA, Lohar D, Stiller J, Lightfoot D, Gresshoff PM. A bacterial artificial chromosome library of Lotus japonicus constructed in an Agrobacterium tumefaciens- transformable vector. Mol Plant Microbe Interact 2001, 14:422-425. 10.1094/MPMI.2001.14.3.422, 11277441.
    • (2001) Mol Plant Microbe Interact , vol.14 , pp. 422-425
    • Men, A.E.1    Meksem, K.2    Kassem, M.A.3    Lohar, D.4    Stiller, J.5    Lightfoot, D.6    Gresshoff, P.M.7
  • 31
    • 0036950020 scopus 로고    scopus 로고
    • One large-insert plant-transformation-competent BIBAC library and three BAC libraries of japonica rice for genome research in rice and other grasses
    • 10.1007/s00122-002-1057-3, 12582934
    • Tao Q, Wang A, Zhang H-B. One large-insert plant-transformation-competent BIBAC library and three BAC libraries of japonica rice for genome research in rice and other grasses. Theor Appl Genet 2002, 105:1058-1066. 10.1007/s00122-002-1057-3, 12582934.
    • (2002) Theor Appl Genet , vol.105 , pp. 1058-1066
    • Tao, Q.1    Wang, A.2    Zhang, H.-B.3
  • 32
    • 2442468047 scopus 로고    scopus 로고
    • Construction of a binary BAC library for an apomictic monosomic addition line of Beta corolliflora in sugar beet and identification of the clones derived from the alien chromosome
    • 10.1007/s00122-003-1566-8, 14749846
    • Fang X, Gu S, Xu Z, Chen F, Guo D, Zhang H-B, Wu N. Construction of a binary BAC library for an apomictic monosomic addition line of Beta corolliflora in sugar beet and identification of the clones derived from the alien chromosome. Theor Appl Genet 2004, 108:1420-1425. 10.1007/s00122-003-1566-8, 14749846.
    • (2004) Theor Appl Genet , vol.108 , pp. 1420-1425
    • Fang, X.1    Gu, S.2    Xu, Z.3    Chen, F.4    Guo, D.5    Zhang, H.-B.6    Wu, N.7
  • 33
    • 15244356067 scopus 로고    scopus 로고
    • Construction and characterization of a plant transformation-competent BIBAC library of the black Sigatoka-resistant banana Musa acuminata cv. Tuu Gia (AA)
    • 10.1007/s00122-004-1896-1, 15650812
    • Ortiz-Vázquez E, Kaemmer D, Zhang H-B, Muth J, Rodríguez-Mendiola M, Arias-Castro C, James A. Construction and characterization of a plant transformation-competent BIBAC library of the black Sigatoka-resistant banana Musa acuminata cv. Tuu Gia (AA). Theor Appl Genet 2005, 110:706-713. 10.1007/s00122-004-1896-1, 15650812.
    • (2005) Theor Appl Genet , vol.110 , pp. 706-713
    • Ortiz-Vázquez, E.1    Kaemmer, D.2    Zhang, H.-B.3    Muth, J.4    Rodríguez-Mendiola, M.5    Arias-Castro, C.6    James, A.7
  • 34
    • 33745194369 scopus 로고    scopus 로고
    • Construction of BAC and BIBAC libraries from sunflower and identification of linkage group-specific clones by overgo hybridization
    • 10.1007/s00122-006-0265-7, 16612648
    • Feng J, Vick BA, Lee M-K, Zhang H-B, Jan CC. Construction of BAC and BIBAC libraries from sunflower and identification of linkage group-specific clones by overgo hybridization. Theor Appl Genet 2006, 113:23-32. 10.1007/s00122-006-0265-7, 16612648.
    • (2006) Theor Appl Genet , vol.113 , pp. 23-32
    • Feng, J.1    Vick, B.A.2    Lee, M.-K.3    Zhang, H.-B.4    Jan, C.C.5
  • 38
    • 84861724968 scopus 로고    scopus 로고
    • Construction of BIBAC and BAC libraries from a variety of organisms for advanced genomics research
    • Zhang H-B, Scheuring CF, Zhang MP, Zhang Y, Wu C-C, Dong JJ, Li Y. Construction of BIBAC and BAC libraries from a variety of organisms for advanced genomics research. Nat Protocols 2012, 7:479-499.
    • (2012) Nat Protocols , vol.7 , pp. 479-499
    • Zhang, H.-B.1    Scheuring, C.F.2    Zhang, M.P.3    Zhang, Y.4    Wu, C.-C.5    Dong, J.J.6    Li, Y.7
  • 39
    • 84861735098 scopus 로고    scopus 로고
    • Preparation of megabase-sized DNA from a variety of organisms using the nuclei method for advanced genomics research
    • Zhang MP, Zhang Y, Scheuring CF, Wu C-C, Dong JJ, Zhang H-B. Preparation of megabase-sized DNA from a variety of organisms using the nuclei method for advanced genomics research. Nat Protocols 2012, 7:467-478.
    • (2012) Nat Protocols , vol.7 , pp. 467-478
    • Zhang, M.P.1    Zhang, Y.2    Scheuring, C.F.3    Wu, C.-C.4    Dong, J.J.5    Zhang, H.-B.6
  • 40
    • 77958514435 scopus 로고    scopus 로고
    • Isolation of megabase-sized DNA fragments from plants
    • Florida: Taylor & Francis Group, LLC, Liu D
    • Zhang MP, Li Y, Zhang H-B. Isolation of megabase-sized DNA fragments from plants. Handbook of Nucleic Acid Purification 2008, 513-524. Florida: Taylor & Francis Group, LLC, Liu D.
    • (2008) Handbook of Nucleic Acid Purification , pp. 513-524
    • Zhang, M.P.1    Li, Y.2    Zhang, H.-B.3
  • 41
    • 0030060516 scopus 로고    scopus 로고
    • Construction and characterization of two rice bacterial artificial chromosome libraries from the parents of a permanent recombinant inbred mapping population
    • Zhang H-B, Choi S, Woo SS, Li ZK, Wing RA. Construction and characterization of two rice bacterial artificial chromosome libraries from the parents of a permanent recombinant inbred mapping population. Mol Breed 1996, 2:11-24.
    • (1996) Mol Breed , vol.2 , pp. 11-24
    • Zhang, H.-B.1    Choi, S.2    Woo, S.S.3    Li, Z.K.4    Wing, R.A.5
  • 43
    • 18144417125 scopus 로고    scopus 로고
    • Cloning, characterization, and evolution of the NBS-encoding resistance gene analogue family in polyploid cotton (Gossypium hirsutum L.)
    • 10.1094/MPMI.2004.17.11.1234, 15553248
    • He LM, Du CG, Covaleda L, Robinson AF, Yu JZ, Kohel RJ, Zhang H-B. Cloning, characterization, and evolution of the NBS-encoding resistance gene analogue family in polyploid cotton (Gossypium hirsutum L.). Mol Plant Microbe Interact 2004, 17:1234-1241. 10.1094/MPMI.2004.17.11.1234, 15553248.
    • (2004) Mol Plant Microbe Interact , vol.17 , pp. 1234-1241
    • He, L.M.1    Du, C.G.2    Covaleda, L.3    Robinson, A.F.4    Yu, J.Z.5    Kohel, R.J.6    Zhang, H.-B.7
  • 44
    • 0031904591 scopus 로고    scopus 로고
    • D-Subgenome Bias of Xcm Resistance genes in tetraploid Gossypium (cotton) suggests that polyploid formation has created novel avenues for evolution
    • 1460294, 9691052
    • Wright RJ, Thaxton PM, El-Zik KM, Paterson AH. D-Subgenome Bias of Xcm Resistance genes in tetraploid Gossypium (cotton) suggests that polyploid formation has created novel avenues for evolution. Genetics 1998, 149:1987-1996. 1460294, 9691052.
    • (1998) Genetics , vol.149 , pp. 1987-1996
    • Wright, R.J.1    Thaxton, P.M.2    El-Zik, K.M.3    Paterson, A.H.4
  • 45
    • 0032976720 scopus 로고    scopus 로고
    • Comparative genetic mapping of allotetraploid cotton and its diploid progenitors
    • Brubaker CL, Paterson AH, Wendel JF. Comparative genetic mapping of allotetraploid cotton and its diploid progenitors. Genome 1999, 42:184-203.
    • (1999) Genome , vol.42 , pp. 184-203
    • Brubaker, C.L.1    Paterson, A.H.2    Wendel, J.F.3
  • 46
    • 84863347367 scopus 로고    scopus 로고
    • Physical mapping of polyploid genomes: A BIBAC physical map of allotetraploid Upland cotton
    • 10.1371/journal.pone.0033644, 3306275, 22438974
    • Zhang MP, Zhang Y, Huang JJ, Lee M-K, Zhang XJ, Stelly DM, Zhang H-B. Physical mapping of polyploid genomes: A BIBAC physical map of allotetraploid Upland cotton. PLoS One 2012, 7:e33644. 10.1371/journal.pone.0033644, 3306275, 22438974.
    • (2012) PLoS One , vol.7
    • Zhang, M.P.1    Zhang, Y.2    Huang, J.J.3    Lee, M.-K.4    Zhang, X.J.5    Stelly, D.M.6    Zhang, H.-B.7
  • 48
    • 79956041126 scopus 로고    scopus 로고
    • 454 sequencing of pooled BAC clones on chromosome 3H of barley
    • 10.1186/1471-2164-12-246, 3224129, 21592415
    • Sato K, Motoi Y, Yamaji N, Yoshida H. 454 sequencing of pooled BAC clones on chromosome 3H of barley. BMC Genomics 2011, 12:246. 10.1186/1471-2164-12-246, 3224129, 21592415.
    • (2011) BMC Genomics , vol.12 , pp. 246
    • Sato, K.1    Motoi, Y.2    Yamaji, N.3    Yoshida, H.4
  • 49
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • 10.1038/35048692, 11130711, The Arabidopsis Genome Initiative
    • The Arabidopsis Genome Initiative Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 2000, 408:796-815. 10.1038/35048692, 11130711, The Arabidopsis Genome Initiative.
    • (2000) Nature , vol.408 , pp. 796-815
  • 51
    • 33749389724 scopus 로고    scopus 로고
    • Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium
    • 10.1101/gr.5282906, 1581434, 16954538
    • Hawkins JS, Kim H, Nason JD, Wing RA, Wendel JF. Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium. Genome Res 2006, 16:1252-1261. 10.1101/gr.5282906, 1581434, 16954538.
    • (2006) Genome Res , vol.16 , pp. 1252-1261
    • Hawkins, J.S.1    Kim, H.2    Nason, J.D.3    Wing, R.A.4    Wendel, J.F.5
  • 55
    • 0035675041 scopus 로고    scopus 로고
    • An integrated map of Arabidopsis thaliana for functional analysis of its genome sequence
    • 1461882, 11729165
    • Chang Y-L, Tao Q, Scheuring C, Meksem K, Zhang H-B. An integrated map of Arabidopsis thaliana for functional analysis of its genome sequence. Genetics 2001, 159:1231-1242. 1461882, 11729165.
    • (2001) Genetics , vol.159 , pp. 1231-1242
    • Chang, Y.-L.1    Tao, Q.2    Scheuring, C.3    Meksem, K.4    Zhang, H.-B.5
  • 56
    • 0034844163 scopus 로고    scopus 로고
    • Bacterial artificial chromosome-based physical map of the rice genome constructed by restriction fingerprint analysis
    • 1461754, 11514457
    • Tao Q-Z, Chang Y-L, Wang J, Chen H, Scheuring C, Islam-Faridi MN, Wang B, Stelly DM, Zhang H-B. Bacterial artificial chromosome-based physical map of the rice genome constructed by restriction fingerprint analysis. Genetics 2001, 158:1711-1724. 1461754, 11514457.
    • (2001) Genetics , vol.158 , pp. 1711-1724
    • Tao, Q.-Z.1    Chang, Y.-L.2    Wang, J.3    Chen, H.4    Scheuring, C.5    Islam-Faridi, M.N.6    Wang, B.7    Stelly, D.M.8    Zhang, H.-B.9
  • 57
    • 0032144421 scopus 로고    scopus 로고
    • The root knot nematode resistance gene Mi from tomato is a member of the leucine zipper, nucleotide binding, leucine-rich repeat family of plant genes
    • 144378, 9707531
    • Milligan SB, Bodeau J, Yaghoobi J, Kaloshianm I, Zabel P, Williamson VM. The root knot nematode resistance gene Mi from tomato is a member of the leucine zipper, nucleotide binding, leucine-rich repeat family of plant genes. Plant Cell 1998, 10:1307-1319. 144378, 9707531.
    • (1998) Plant Cell , vol.10 , pp. 1307-1319
    • Milligan, S.B.1    Bodeau, J.2    Yaghoobi, J.3    Kaloshianm, I.4    Zabel, P.5    Williamson, V.M.6
  • 59
    • 80052596511 scopus 로고    scopus 로고
    • A comparative physical map reveals the pattern of chromosomal evolution between the turkey (Meleagris gallopavo) and chicken (Gallus gallus) genomes
    • 10.1186/1471-2164-12-447, 3189400, 21906286
    • Zhang Y, Zhang X, O'Hare TH, Payne WS, Dong JJ, Scheuring CF, Zhang MP, Huang JJ, Delany M, Zhang H-B, Dodgson JB. A comparative physical map reveals the pattern of chromosomal evolution between the turkey (Meleagris gallopavo) and chicken (Gallus gallus) genomes. BMC Genomics 2011, 12:447. 10.1186/1471-2164-12-447, 3189400, 21906286.
    • (2011) BMC Genomics , vol.12 , pp. 447
    • Zhang, Y.1    Zhang, X.2    O'Hare, T.H.3    Payne, W.S.4    Dong, J.J.5    Scheuring, C.F.6    Zhang, M.P.7    Huang, J.J.8    Delany, M.9    Zhang, H.-B.10    Dodgson, J.B.11
  • 60
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using Phred. I. accuracy assessment
    • Ewing B, Hillier L, Wendl MC, Green P. Base-calling of automated sequencer traces using Phred. I. accuracy assessment. Genome Res 1998, 8:175-185.
    • (1998) Genome Res , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 61
    • 0031978181 scopus 로고    scopus 로고
    • Base calling of automated sequencer traces using Phred. II. error probabilities
    • Ewing B, Green P. Base calling of automated sequencer traces using Phred. II. error probabilities. Genome Res 1998, 8:186-194.
    • (1998) Genome Res , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 62
    • 0031586003 scopus 로고    scopus 로고
    • Prediction of complete gene structures in human genomic DNA
    • 10.1006/jmbi.1997.0951, 9149143
    • Burge C, Karlin S. Prediction of complete gene structures in human genomic DNA. J Mol Biol 1997, 268:78-94. 10.1006/jmbi.1997.0951, 9149143.
    • (1997) J Mol Biol , vol.268 , pp. 78-94
    • Burge, C.1    Karlin, S.2
  • 63
    • 29144453390 scopus 로고    scopus 로고
    • Gene identification in novel eukaryotic genomes by self-training algorithm
    • 10.1093/nar/gki937, 1298918, 16314312
    • Lomsadze A, Ter-Hovhannisyan V, Chernoff Y, Borodovsky M. Gene identification in novel eukaryotic genomes by self-training algorithm. Nucleic Acids Res 2005, 33:6494-6506. 10.1093/nar/gki937, 1298918, 16314312.
    • (2005) Nucleic Acids Res , vol.33 , pp. 6494-6506
    • Lomsadze, A.1    Ter-Hovhannisyan, V.2    Chernoff, Y.3    Borodovsky, M.4
  • 64
    • 0036226603 scopus 로고    scopus 로고
    • BLAT - the BLAST-like alignment tool
    • 187518, 11932250
    • Kent WJ. BLAT - the BLAST-like alignment tool. Genome Res 2002, 12:656-664. 187518, 11932250.
    • (2002) Genome Res , vol.12 , pp. 656-664
    • Kent, W.J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.