메뉴 건너뛰기




Volumn 12, Issue , 2011, Pages

454 sequencing of pooled BAC clones on chromosome 3H of barley

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; CONTIG;

EID: 79956041126     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-12-246     Document Type: Article
Times cited : (15)

References (42)
  • 2
    • 51649150815 scopus 로고
    • Nuclear DNA content of some important plant species
    • Arumuganathan K, Earle ED. Nuclear DNA content of some important plant species. Plant Mol Biol Rep 1991, 9:208-218.
    • (1991) Plant Mol Biol Rep , vol.9 , pp. 208-218
    • Arumuganathan, K.1    Earle, E.D.2
  • 3
    • 79959494924 scopus 로고    scopus 로고
    • HarvEST:Barley database
    • HarvEST:Barley database. , http://harvest.ucr.edu/
  • 6
    • 68349151220 scopus 로고    scopus 로고
    • A high-density transcript linkage map of barley derived from a single population
    • 10.1038/hdy.2009.57, 19455180
    • Sato K, Nankaku N, Takeda K. A high-density transcript linkage map of barley derived from a single population. Heredity 2009, 103(2):110-117. 10.1038/hdy.2009.57, 19455180.
    • (2009) Heredity , vol.103 , Issue.2 , pp. 110-117
    • Sato, K.1    Nankaku, N.2    Takeda, K.3
  • 7
    • 33745500489 scopus 로고    scopus 로고
    • Genetic mapping and BAC assignment of EST-derived SSR markers shows non-uniform distribution of genes in the barley genome
    • 10.1007/s00122-006-0289-z, 16791690
    • Varshney RK, Grosse I, Hahnel U, Siefken R, Prasad M, Stein N, Langridge P, Altschmied L, Graner A. Genetic mapping and BAC assignment of EST-derived SSR markers shows non-uniform distribution of genes in the barley genome. Theor Appl Genet 2006, 113(2):239-250. 10.1007/s00122-006-0289-z, 16791690.
    • (2006) Theor Appl Genet , vol.113 , Issue.2 , pp. 239-250
    • Varshney, R.K.1    Grosse, I.2    Hahnel, U.3    Siefken, R.4    Prasad, M.5    Stein, N.6    Langridge, P.7    Altschmied, L.8    Graner, A.9
  • 10
    • 14744267197 scopus 로고    scopus 로고
    • Updating the 'crop circle'
    • 10.1016/j.pbi.2005.01.005, 15752995
    • Devos KM. Updating the 'crop circle'. Curr Opin Plant Biol 2005, 8(2):155-162. 10.1016/j.pbi.2005.01.005, 15752995.
    • (2005) Curr Opin Plant Biol , vol.8 , Issue.2 , pp. 155-162
    • Devos, K.M.1
  • 11
    • 0029334974 scopus 로고
    • Cereal genome evolution. Grasses, line up and form a circle
    • 10.1016/S0960-9822(95)00148-5, 7583118
    • Moore G, Devos KM, Wang Z, Gale MD. Cereal genome evolution. Grasses, line up and form a circle. Curr Biol 1995, 5(7):737-739. 10.1016/S0960-9822(95)00148-5, 7583118.
    • (1995) Curr Biol , vol.5 , Issue.7 , pp. 737-739
    • Moore, G.1    Devos, K.M.2    Wang, Z.3    Gale, M.D.4
  • 15
    • 33947242310 scopus 로고    scopus 로고
    • Construction and characterization of a bacterial artificial chromosome (BAC) library for Japanese malting barley 'Haruna Nijo'
    • Saisho D, Myoraku E, Kawasaki S, K S, Takeda K. Construction and characterization of a bacterial artificial chromosome (BAC) library for Japanese malting barley 'Haruna Nijo'. Breed Sci 2007, 57:29-38.
    • (2007) Breed Sci , vol.57 , pp. 29-38
    • Saisho, D.1    Myoraku, E.2    Kawasaki, S.3    K, S.4    Takeda, K.5
  • 16
    • 71549162664 scopus 로고    scopus 로고
    • International Barley Sequencing Consortium
    • International Barley Sequencing Consortium. , http://barleygenome.org
  • 18
    • 0032540905 scopus 로고    scopus 로고
    • A sequencing method based on real-time pyrophosphate
    • Ronaghi M, Uhlen M, Nyren P. A sequencing method based on real-time pyrophosphate. Science 1998, 281(5375):363-365.
    • (1998) Science , vol.281 , Issue.5375 , pp. 363-365
    • Ronaghi, M.1    Uhlen, M.2    Nyren, P.3
  • 19
    • 33750688196 scopus 로고    scopus 로고
    • 454 sequencing put to the test using the complex genome of barley
    • 10.1186/1471-2164-7-275, 1633745, 17067373
    • Wicker T, Schlagenhauf E, Graner A, Close TJ, Keller B, Stein N. 454 sequencing put to the test using the complex genome of barley. BMC Genomics 2006, 7:275. 10.1186/1471-2164-7-275, 1633745, 17067373.
    • (2006) BMC Genomics , vol.7 , pp. 275
    • Wicker, T.1    Schlagenhauf, E.2    Graner, A.3    Close, T.J.4    Keller, B.5    Stein, N.6
  • 20
    • 0032849859 scopus 로고    scopus 로고
    • CAP3: A DNA sequence assembly program
    • 10.1101/gr.9.9.868, 310812, 10508846
    • Huang X, Madan A. CAP3: A DNA sequence assembly program. Genome Res 1999, 9(9):868-877. 10.1101/gr.9.9.868, 310812, 10508846.
    • (1999) Genome Res , vol.9 , Issue.9 , pp. 868-877
    • Huang, X.1    Madan, A.2
  • 21
    • 67650140201 scopus 로고    scopus 로고
    • Development of 5006 full-length cDNAs in barley: a tool for accessing cereal genomics resources
    • 10.1093/dnares/dsn034, 2671202, 19150987
    • Sato K, Shin-I T, Seki M, Shinozaki K, Yoshida H, Takeda K, Yamazaki Y, Conte M, Kohara Y. Development of 5006 full-length cDNAs in barley: a tool for accessing cereal genomics resources. DNA Res 2009, 16(2):81-89. 10.1093/dnares/dsn034, 2671202, 19150987.
    • (2009) DNA Res , vol.16 , Issue.2 , pp. 81-89
    • Sato, K.1    Shin-I, T.2    Seki, M.3    Shinozaki, K.4    Yoshida, H.5    Takeda, K.6    Yamazaki, Y.7    Conte, M.8    Kohara, Y.9
  • 23
    • 84874231169 scopus 로고    scopus 로고
    • Rice Annotation Project Database
    • Rice Annotation Project Database. , http://rapdb.dna.affrc.go.jp/archive/build4.html
  • 24
    • 0343986281 scopus 로고    scopus 로고
    • Cytologically integrated physical restriction fragment length polymorphism maps for the barley genome based on translocation breakpoints
    • 1460903, 10628998
    • Künzel G, Korzun L, Meister A. Cytologically integrated physical restriction fragment length polymorphism maps for the barley genome based on translocation breakpoints. Genetics 2000, 154(1):397-412. 1460903, 10628998.
    • (2000) Genetics , vol.154 , Issue.1 , pp. 397-412
    • Künzel, G.1    Korzun, L.2    Meister, A.3
  • 25
    • 79959505758 scopus 로고    scopus 로고
    • Brachypodium distachyon resource
    • Brachypodium distachyon resource. , http://www.brachypodium.org/
  • 31
    • 79959507550 scopus 로고    scopus 로고
    • Barley Contig Viewer
    • Barley Contig Viewer Barley Contig Viewer., http://150.46.168.145/gbrowse/
  • 33
    • 33845490795 scopus 로고    scopus 로고
    • Disequilibrium and association in barley: thinking outside the glass
    • 10.1073/pnas.0609405103, 1693672, 17130443
    • Hayes P, Szücs P. Disequilibrium and association in barley: thinking outside the glass. Proc Natl Acad Sci USA 2006, 103(49):18385-18386. 10.1073/pnas.0609405103, 1693672, 17130443.
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.49 , pp. 18385-18386
    • Hayes, P.1    Szücs, P.2
  • 34
    • 29544451678 scopus 로고    scopus 로고
    • Chromosomal assignment and deletion mapping of barley EST markers
    • 10.1266/ggs.80.357, 16394587
    • Nasuda S, Kikkawa Y, Ashida T, Islam AK, Sato K, Endo TR. Chromosomal assignment and deletion mapping of barley EST markers. Genes Genet Syst 2005, 80(5):357-366. 10.1266/ggs.80.357, 16394587.
    • (2005) Genes Genet Syst , vol.80 , Issue.5 , pp. 357-366
    • Nasuda, S.1    Kikkawa, Y.2    Ashida, T.3    Islam, A.K.4    Sato, K.5    Endo, T.R.6
  • 35
    • 0034528980 scopus 로고    scopus 로고
    • Flow sorting of mitotic chromosomes in common wheat (Triticum aestivum L.)
    • 2000, 1461381, 11102393
    • Vrána J, Kubaláková M, Simková H, Cíhalíková J, Lysák MA, Dolezel J. Flow sorting of mitotic chromosomes in common wheat (Triticum aestivum L.). Genetics 2000, 156:2033-2041. 2000, 1461381, 11102393.
    • (2000) Genetics , vol.156 , pp. 2033-2041
    • Vrána, J.1    Kubaláková, M.2    Simková, H.3    Cíhalíková, J.4    Lysák, M.A.5    Dolezel, J.6
  • 36
    • 79959514030 scopus 로고    scopus 로고
    • Barley DB. , http://www.shigen.nig.ac.jp/barley/
    • Barley, D.B.1
  • 37
    • 79959522877 scopus 로고    scopus 로고
    • Triticeae Repeat Sequence Database (TREP)
    • Triticeae Repeat Sequence Database (TREP). , http://wheat.pw.usda.gov/ITMI/Repeats/
  • 38
    • 0004239562 scopus 로고    scopus 로고
    • RepeatMasker
    • RepeatMasker. , http://www.repeatmasker.org/
  • 39
    • 79959509641 scopus 로고    scopus 로고
    • Genscan
    • Genscan. , http://genes.mit.edu/GENSCANinfo.html
  • 40
    • 79959496557 scopus 로고    scopus 로고
    • GlimmerHMM
    • GlimmerHMM. , http://www.cbcb.umd.edu/software/GlimmerHMM/
  • 41
    • 79959503218 scopus 로고    scopus 로고
    • Gbrowse
    • Gbrowse. , http://gmod.org/wiki/Ggb/
  • 42
    • 79959501453 scopus 로고    scopus 로고
    • AUGUSTUS
    • AUGUSTUS. , http://augustus.gobics.de/


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.