Integrative taxonomy on the fast track - towards more sustainability in biodiversity research

Frontiers in Zoology

Volumn 10, Issue 1, 2013, Pages

  Riedel, Alexander ^a   Sagata, Katayo ^b   Suhardjono, Yayuk R ^c   Tänzler, Rene ^d   Balke, Michael ^d,e  

^a The State Museum of Natural History Museum Karlsruhe   (Germany)

^b Papua New Guinea Institute for Biological research (PNG IBR)   (Papua New Guinea)

^c INDONESIAN INSTITUTE OF SCIENCES   (Indonesia)

^d ZOOLOGISCHE STAATSSAMMLUNG MÜNCHEN   (Germany)

^e UNIVERSITY OF MUNICH   (Germany)

Author keywords

DNA barcoding; Integrative taxonomy; Taxonomic description; Taxonomic impediment

Indexed keywords

CURCULIONIDAE;

EID: 84875307959     PISSN: None     EISSN: 17429994     Source Type: Journal    
DOI: 10.1186/1742-9994-10-15     Document Type: Article

References (44)

1. Biodiversity 1988, Washington, DC: National Academy Press, Wilson EO.
2. Godfray HCJ. Challenges for taxonomy. Nature 2002, 417:17-19. 10.1038/417017a, 11986643.
3. Tautz D, Arctander P, Minelli A, Thomas RH, Vogler A. A plea for DNA taxonomy. TREE 2003, 18:70-74.
4. Joppa LN, Roberts DL, Pimm SL. The population ecology and social behaviour of taxonomists. TREE 2011, 26:551-553.
5. Tancoigne E, Dubois A. Taxonomy: no decline, but inertia. Cladistics 2013, 1-4. early online.
6. Scheffers BR, Joppa LN, Pimm SL, Laurance WF. What we know and don't know about Earth's missing biodiversity. TREE 2012, 27:501-510. 10.1016/j.tree.2012.05.008, 22784409.
7. Hennig W. Phylogenetic systematics 1966, Urbana: University of Illinois Press.
8. Sneath PHA, Sokal RR. Numerical taxonomy - the principles and practice of numerical classification 1973, San Francisco: W H Freeman.
9. Partridge TR, Dallwitz MJ, Watson L. A primer for the DELTA system 1993, Canberra: CSIRO Division of Entomology, 3.
10. Global Taxonomy Initiative (GTI). http://www.cbd.int/gti/problem.shtml.
11. Hamilton AJ, Basset Y, Benke KK, Grimbacher PS, Miller SE, Novotný V, Samuelson GA, Stork NE, Weiblen GD, Yen JDL. Quantifying uncertainty in estimation of tropical arthropod species richness. Am Nat 2010, 176:90-95. 10.1086/652998, 20455708.
12. Dubois A. A partial but radical solution to the problem of nomenclatural taxonomic inflation and synonymy load. Biol J Linn Soc 2008, 857:1-863.
13. Carvalho MR. Taxonomic impediment or impediment to taxonomy? A commentary on systematics and the cybertaxonomic-automation paradigm. Evolutionary Biology 2007, 34:140-143.
14. Ebach MC, Valdecasas AG, Wheeler QD. Impediments to taxonomy and users of taxonomy: accessibility and impact evaluation. Cladistics 2011, 27:550-557.
15. Godfray HCJ. Linnaeus in the information age. Nature 2007, 446:259-260. 10.1038/446259a, 17361160.
16. Butcher BA, Smith MA, Sharkey MJ, Quicke DLJ. A turbo-taxonomic study of Thai aleiodes (aleiodes) and aleiodes (arcaleiodes) (hymenoptera: braconidae: rogadinae) based largely on COI barcoded specimens, with rapid descriptions of 179 new species. Zootaxa 2012, 3457:1-232.
17. Fontaine B, Perrard A, Bouchet P. 21 Years of shelf life between discovery and description of new species. Curr Biol 2012, 22:R943-R944. 10.1016/j.cub.2012.10.029, 23174292.
18. Riedel A, Daawia D, Balke M. Deep cox1 divergence and hyperdiversity of trigonopterus weevils in a New guinea mountain range (coleoptera, curculionidae). Zoologica Scripta 2010, 39:63-74.
19. Tänzler R, Sagata K, Surbakti S, Balke M, Riedel A. DNA barcoding for community ecology - how to tackle a hyperdiverse, mostly undescribed Melanesian fauna. PLoS One 2012, 7:e28832. 10.1371/journal.pone.0028832, 3258243, 22253699.
20. Riedel A, Sagata K, Surbakti S, Tänzler R, Balke M. One hundred and one new species of trigonopterus weevils from New guinea. Zookeys 2013, in press.
21. International Commission on Zoological Nomenclature International code of zoological nomenclature. Fourth edition adopted by the international union of biological sciences 1999, London: International Trust for Zoological Nomenclature, International Commission on Zoological Nomenclature.
22. International Commission on Zoological Nomenclature Amendment of Articles 8, 9, 10, 21 and 78 of the International Code of Zoological nomenclature to expand and refine methods of publication. Bull Zool Nomencl 2012, 69:161-169. Zootaxa 2012, 3450:1-7; Zookeys 2012, 219:1-10, International Commission on Zoological Nomenclature.
23. Hebert PDN, Cywinska A, Ball SL, deWaard JR. Biological identifications through DNA barcodes. Proceedings of the Royal Society London B 2003, 270:313-321.
24. Hebert PDN, deWaard J, Landry JF. DNA barcodes for 1/1000 of the animal kingdom. Biol Letters 2010, 6:359-362.
25. Hausmann A, Haszprunar G, Hebert PDN. DNA barcoding the geometrid fauna of Bavaria (Lepidoptera): successes, surprises, and questions. PLoS One 2011, 6:e17134. 10.1371/journal.pone.0017134, 3040642, 21423340.
26. Hendrich L, Pons J, Ribera I, Balke M. Mitochondrial cox1 sequence data reliably uncover patterns of insect diversity but suffer from high lineage-idiosyncratic error rates. PLoS One 2010, 5:e14448. 10.1371/journal.pone.0014448, 3010977, 21203427.
27. Lapage SP, Sneath PHA, Lessel EF, Skerman VBD, Seeliger HPR, Clark WA. International code of nomenclature of bacteria: bacteriological code, 1990 revision 1992, Washington DC: ASM Press.
28. Strutzenberger P, Brehm G, Fiedler K. DNA barcode sequencing from Old type specimens as a tool in taxonomy: a case study in the diverse genus eois (Lepidoptera: geometridae). PLoS One 2012, 7:e49710. 10.1371/journal.pone.0049710, 3504115, 23185414.
29. Species-ID http://species-id.net/wiki.
30. Hendrich L, Balke M. A simultaneous journal/wiki publication and dissemination of a new species description: neobidessodes darwiniensis sp. n. From northern Australia (coleoptera, dytiscidae, bidessini). ZooKeys 2011, 79:11-20. 10.3897/zookeys.79.803, 3088048, 21594142.
31. Hendrich L, Balke M. Neobidessodes darwiniensis http://species-id.net/wiki/Neobidessodes_darwiniensis.
32. Penev L, Hagedorn G, Mietchen D, Georgiev T, Stoev P, Sautter G, Agosti D, Plank A, Balke M, Hendrich L, Erwin TL. Interlinking journal and wiki publications through joint citation: working examples from ZooKeys and plazi on species-ID. ZooKeys 2011, 90:1-12. 10.3897/zookeys.90.1369, 3084489, 21594104.
33. Maddison DR, Guralnick R, Hill A, Reysenbach A-L, McDade LA. Ramping up biodiversity discovery via online quantum contributions. TREE 2011, 27:72-77.
34. Page RDM. Wikipedia as an encyclopaedia of life. Organisms Diversity & Evolution 2010, 10:343-349. 10.1007/s13127-010-0028-9, 23573203.
35. ZooBank http://zoobank.org.
36. Minelli A. Zoological nomenclature in the digital era. Frontiers in Zoology 2013, 10.1:1-7.
37. Shiyang K, Srivathsan A, Meier R. An update on DNA barcoding: low species coverage and numerous unidentified sequences. Cladistics 2012, 28:639-644.
38. Bridge PD, Roberts PJ, Spooner BM, Panchal G. On the unreliability of published DNA sequences. New Phytol 2003, 160:43-48.
39. Forster P. To Err is human. Ann Hum Genet 2003, 67:2-4. 10.1046/j.1469-1809.2003.00002.x, 12556229.
40. BOLD http://www.boldsystems.org.
41. Riedel A. The pygmaeus-group of euops schoenherr (coleoptera, curculionoidea, attelabidae), weevils associated with nothofagus in New Guinea. J Nat Hist 2001, 35:1173-1237.
42. Riedel A. Revision of the subgenus neosynaptops Voss of euops schoenherr (coleoptera, curculionoidea, attelabidae) from the Papuan region. Zoologica Scripta 2002, 31:135-165.
43. Pinzón-Navarro S, Barrios H, Múrria C, Lyal CH, Vogler AP. DNA-based taxonomy of larval stages reveals huge unknown species diversity in neotropical seed weevils (genus conotrachelus): relevance to evolutionary ecology. Mol Phylogenet Evol 2010, 56:281-293. 10.1016/j.ympev.2010.02.022, 20188844.
44. Linnaeus C. Systema naturae 1758, Sweden: Salvius: Holmiae (Stockholm), 10.