메뉴 건너뛰기




Volumn 8, Issue 3, 2013, Pages

Analysis of Flow Cytometry Data by Matrix Relevance Learning Vector Quantization

Author keywords

[No Author keywords available]

Indexed keywords

ACUTE GRANULOCYTIC LEUKEMIA; ANALYTIC METHOD; ARTICLE; CONTROLLED STUDY; DECISION SUPPORT SYSTEM; FLOW CYTOMETRY; GENERALIZED MATRIX RELEVANCE LEARNING VECTOR QUANTIZATION; HUMAN; MACHINE LEARNING; MAJOR CLINICAL STUDY; PREDICTION; STANDARDIZATION;

EID: 84875060415     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0059401     Document Type: Article
Times cited : (41)

References (32)
  • 1
    • 84874666550 scopus 로고    scopus 로고
    • Critical assesment of automated flow cytometry analysis techniques
    • The FlowCap Consortium, The Dream Consortium, advance online publication, 10 February 2013. URL
    • Aghaeepour N, Finak G, The FlowCap Consortium, The Dream Consortium, Hoos H, et al. (2013) Critical assesment of automated flow cytometry analysis techniques. Nature Methods, advance online publication, 10 February 2013. URL http://www.nature.com/nmeth/journal/vaop/ncurrent/abs/nmeth.2365.html. Accessed 2013 Feb 19.
    • (2013) Nature Methods
    • Aghaeepour, N.1    Finak, G.2    Hoos, H.3
  • 3
    • 84875067262 scopus 로고    scopus 로고
    • The DREAM Project: Dialogue for Reverse Engineering Assessments and Methods, The DREAM project website. URL
    • The DREAM Project: Dialogue for Reverse Engineering Assessments and Methods (2011) DREAM6/FlowCAP2 molecular classification of Acute Myeloid Leukaemia. The DREAM project website. URL http://www.the-dream-project.org/challenges. Accessed 2013 Feb 19.
    • (2011) DREAM6/FlowCAP2 molecular classification of Acute Myeloid Leukaemia
  • 4
    • 36249019789 scopus 로고    scopus 로고
    • Dialogue on reverse-engineering assessment and methods: The dream of high-throughput pathway inference
    • In: Stolovitzky G, Califano A, editors
    • Stolovitzky G, Monroe D, Califano A (2007) Dialogue on reverse-engineering assessment and methods: The dream of high-throughput pathway inference. In: Stolovitzky G, Califano A, editors, Annals of the New York Academy of Sciences. volume 1115, 11-22.
    • (2007) Annals of the New York Academy of Sciences , vol.1115 , pp. 11-22
    • Stolovitzky, G.1    Monroe, D.2    Califano, A.3
  • 5
    • 63849210631 scopus 로고    scopus 로고
    • Lessons from the dream2 challenges
    • In: Stolovitzky G, Kahlem P, Califano A, editors
    • Stolovitzky G, Prill R, Califano A (2009) Lessons from the dream2 challenges. In: Stolovitzky G, Kahlem P, Califano A, editors, Annals of the New York Academy of Sciences. volume 1158, 159-195.
    • (2009) Annals of the New York Academy of Sciences , vol.1158 , pp. 159-195
    • Stolovitzky, G.1    Prill, R.2    Califano, A.3
  • 6
    • 77949644952 scopus 로고    scopus 로고
    • Towards a rigorous assessment of systems biology models: the DREAM3 challenges
    • Prill R, Marbach D, Saez-Rodriguez J, Sorger P, Alexopoulos L, et al. (2010) Towards a rigorous assessment of systems biology models: the DREAM3 challenges. PLoS One 5: e9202.
    • (2010) PLoS One , vol.5
    • Prill, R.1    Marbach, D.2    Saez-Rodriguez, J.3    Sorger, P.4    Alexopoulos, L.5
  • 9
    • 72249111970 scopus 로고    scopus 로고
    • Adaptive relevance matrices in learning vector quantization
    • Schneider P, Biehl M, Hammer B, (2009) Adaptive relevance matrices in learning vector quantization. Neural Computation 21: 3532-3561.
    • (2009) Neural Computation , vol.21 , pp. 3532-3561
    • Schneider, P.1    Biehl, M.2    Hammer, B.3
  • 11
    • 84855962168 scopus 로고    scopus 로고
    • Limited rank matrix learning, discriminative dimension reduction and visualization
    • Bunte K, Schneider P, Hammer B, Schleif FM, Villmann T, et al. (2012) Limited rank matrix learning, discriminative dimension reduction and visualization. Neural Networks 26: 159-173.
    • (2012) Neural Networks , vol.26 , pp. 159-173
    • Bunte, K.1    Schneider, P.2    Hammer, B.3    Schleif, F.M.4    Villmann, T.5
  • 12
    • 0003410791 scopus 로고    scopus 로고
    • Berlin, Heidelberg: Springer, second edition
    • Kohonen T (1997) Self-Organizing Maps. Berlin, Heidelberg: Springer, second edition.
    • (1997) Self-Organizing Maps
    • Kohonen, T.1
  • 14
    • 84875072645 scopus 로고    scopus 로고
    • Description of the acute myeloid leukemia (AML) data set
    • The Recomb-DREAM2011 website. URL
    • Rogers W (2011) Description of the acute myeloid leukemia (AML) data set. Conference presentation, 6th Annual DREAM conference. The Recomb-DREAM2011 website. URL http://www.recomb-dream2011.org. Accessed 2013 Feb 19.
    • (2011) Conference presentation, 6th Annual DREAM conference
    • Rogers, W.1
  • 15
  • 16
    • 84875063491 scopus 로고    scopus 로고
    • Multidimensional entropies for diagnosing Acute Myeloid Leukemia from patient samples using flow cytometry data
    • The Recomb-DREAM2011 website. URL
    • Vilar J (2011) Multidimensional entropies for diagnosing Acute Myeloid Leukemia from patient samples using flow cytometry data. Conference presentation, 6th Annual DREAM conference. The Recomb-DREAM2011 website. URL http://www.recomb-dream2011.org. Accessed 2013 Feb 19.
    • (2011) Conference presentation, 6th Annual DREAM conference
    • Vilar, J.1
  • 18
    • 0036791938 scopus 로고    scopus 로고
    • Generalized relevance learning vector quantization
    • Hammer B, Villmann T, (2002) Generalized relevance learning vector quantization. Neural Networks 15: 1059-1068.
    • (2002) Neural Networks , vol.15 , pp. 1059-1068
    • Hammer, B.1    Villmann, T.2
  • 19
    • 84880918941 scopus 로고    scopus 로고
    • Waypoint averaging and step size control in learning by gradient descent
    • In: Schleif FM, Villmann T, editors
    • Papari G, Bunte K, Biehl M (2011) Waypoint averaging and step size control in learning by gradient descent. In: Schleif FM, Villmann T, editors, Proc. Mittweida Workshop on Computational Intelligence, MiWoCi 2011. volume 6/2012 of Machine Learning Reports, 16-26.
    • (2011) Proc. Mittweida Workshop on Computational Intelligence, MiWoCi 2011 , pp. 16-26
    • Papari, G.1    Bunte, K.2    Biehl, M.3
  • 20
    • 33646023117 scopus 로고    scopus 로고
    • An introduction to ROC analysis
    • Fawcett T, (2006) An introduction to ROC analysis. Patt Rec Lett 27: 861-874.
    • (2006) Patt Rec Lett , vol.27 , pp. 861-874
    • Fawcett, T.1
  • 22
    • 84875067621 scopus 로고    scopus 로고
    • Regression based classification of AML flow cytometry profiles
    • The Recomb- DREAM2011 website. URL
    • Amar D, Orenstein Y, Zeira R, Shamir R (2011) Regression based classification of AML flow cytometry profiles. Conference presentation, 6th Annual DREAM conference. The Recomb- DREAM2011 website. URL http://www.recomb-dream2011.org. Accessed 2013 Feb 19.
    • (2011) Conference presentation, 6th Annual DREAM conference
    • Amar, D.1    Orenstein, Y.2    Zeira, R.3    Shamir, R.4
  • 24
    • 84875068154 scopus 로고    scopus 로고
    • The Machine Learning Open Source Software (MLOSS) website. URL
    • Strickert M (2011) Correlative matrix mapping. The Machine Learning Open Source Software (MLOSS) website. URL http://mloss.org/software/view/293/. Accessed 2013 Feb 19.
    • (2011) Correlative matrix mapping
    • Strickert, M.1
  • 25
    • 84864925590 scopus 로고    scopus 로고
    • Jstacs - a Java framework for statistical analysis and classification of biological sequences
    • Grau J, Keilwagen J, Gohr A, Haldemann B, Posch S, et al. (2012) Jstacs - a Java framework for statistical analysis and classification of biological sequences. JMLR 13: 1967-1971.
    • (2012) JMLR , vol.13 , pp. 1967-1971
    • Grau, J.1    Keilwagen, J.2    Gohr, A.3    Haldemann, B.4    Posch, S.5
  • 26
    • 84875078107 scopus 로고    scopus 로고
    • Scoring the classification of AML challenge
    • The Recomb-DREAM2011 website. URL
    • Norel R (2011) Scoring the classification of AML challenge. Conference presentation, 6th Annual DREAM conference. The Recomb-DREAM2011 website. URL http://www.recomb-dream2011.org. Accessed 2013 Feb 19.
    • (2011) Conference presentation, 6th Annual DREAM conference
    • Norel, R.1
  • 29
    • 17944381145 scopus 로고    scopus 로고
    • CD56 antigenic expression in acute myeloid leukemia identifies patients with poor clinical prognosis
    • Raspadori D, Damiani D, Lenoci M, Rondelli D, Testoni N, et al. (2001) CD56 antigenic expression in acute myeloid leukemia identifies patients with poor clinical prognosis. Leukemia 15: 1161-1164.
    • (2001) Leukemia , vol.15 , pp. 1161-1164
    • Raspadori, D.1    Damiani, D.2    Lenoci, M.3    Rondelli, D.4    Testoni, N.5
  • 30
    • 0037265806 scopus 로고    scopus 로고
    • High percentage of CD34-positive cells in autologous AML peripheral blood stem cell products reflects inadequate in vivo purging and low chemotherapeutic toxicity in a subgroup of patients with poor clinical outcome
    • Feller N, Schuurhuis G, van der Pol M, Westra G, Weijers G, et al. (2003) High percentage of CD34-positive cells in autologous AML peripheral blood stem cell products reflects inadequate in vivo purging and low chemotherapeutic toxicity in a subgroup of patients with poor clinical outcome. Leukemia 17: 68-75.
    • (2003) Leukemia , vol.17 , pp. 68-75
    • Feller, N.1    Schuurhuis, G.2    van der Pol, M.3    Westra, G.4    Weijers, G.5
  • 31
    • 77953623074 scopus 로고    scopus 로고
    • Positive and negative predictive values of HLA-DR and CD34 of acute promyelocytic leukemia and other types of acute myeloid leukemia with recurrent chromosomal translocations
    • Promsuwicha O, Auewarakul C, (2009) Positive and negative predictive values of HLA-DR and CD34 of acute promyelocytic leukemia and other types of acute myeloid leukemia with recurrent chromosomal translocations. Asian Pac J Allergy Immunol 27: 209-216.
    • (2009) Asian Pac J Allergy Immunol , vol.27 , pp. 209-216
    • Promsuwicha, O.1    Auewarakul, C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.