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Volumn 159, Issue PART3, 2013, Pages 515-535

Proteins involved in electron transfer to Fe(III) and Mn(IV) oxides by Geobacter sulfurreducens and Geobacter uraniireducens

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME C; FERRIC CITRATE; FERRICYTOCHROME C OXIDOREDUCTASE COMPLEX CBC3 PROTEIN; FERRICYTOCHROME C OXIDOREDUCTASE COMPLEX CBC6 PROTEIN; IRON OXIDE; MANGANESE OXIDE; MENAQUINONE; METAL OXIDE; MULTICOPPER OXIDASE OMPC PROTEIN; OUTER MEMBRANE C TYPE CYTOCHROME OMCA PROTEIN; OUTER MEMBRANE C TYPE CYTOCHROME OMCC PROTEIN; OUTER MEMBRANE C TYPE CYTOCHROME OMCE PROTEIN; OUTER MEMBRANE C TYPE CYTOCHROME OMCH PROTEIN; OUTER MEMBRANE C TYPE CYTOCHROME OMCL PROTEIN; OUTER MEMBRANE C TYPE CYTOCHROME OMCN PROTEIN; OUTER MEMBRANE C TYPE CYTOCHROME OMCO PROTEIN; OUTER MEMBRANE C TYPE CYTOCHROME OMCP PROTEIN; OUTER MEMBRANE C TYPE CYTOCHROME OMCV PROTEIN; OUTER MEMBRANE C TYPE CYTOCHROMES OMAB PROTEIN; OUTER MEMBRANE C TYPE CYTOCHROMES OMAC PROTEIN; OUTER MEMBRANE C TYPE CYTOCHROMES OMCB PROTEIN; OUTER MEMBRANE C TYPE CYTOCHROMES OMCZ PROTEIN; PERIPLASMIC C TYPE CYTOCHROME PCCG PROTEIN; PERIPLASMIC C TYPE CYTOCHROME PCCJ PROTEIN; PERIPLASMIC C TYPE CYTOCHROMES PCCR PROTEIN; PERIPLASMIC C TYPE CYTOCHROMES PGCA PROTEIN; PERIPLASMIC C TYPE CYTOCHROMES PPCA PROTEIN; PERIPLASMIC C TYPE CYTOCHROMES PPCD PROTEIN; PERIPLASMIC PROTEIN; UNCLASSIFIED DRUG; UNINDEXED DRUG;

EID: 84874772938     PISSN: 13500872     EISSN: 14652080     Source Type: Journal    
DOI: 10.1099/mic.0.064089-0     Document Type: Article
Times cited : (143)

References (97)
  • 1
    • 23944477958 scopus 로고    scopus 로고
    • A novel Geobacteraceae-specific outer membrane protein J (OmpJ) is essential for electron transport to Fe(III) and Mn(IV) oxides in Geobacter sulfurreducens
    • Afkar, E., Reguera, G., Schiffer, M. & Lovley, D. R. (2005). A novel Geobacteraceae-specific outer membrane protein J (OmpJ) is essential for electron transport to Fe(III) and Mn(IV) oxides in Geobacter sulfurreducens. BMC Microbiol 5, 41.
    • (2005) BMC Microbiol , vol.5 , pp. 41
    • Afkar, E.1    Reguera, G.2    Schiffer, M.3    Lovley, D.R.4
  • 5
    • 34248655667 scopus 로고    scopus 로고
    • The bacterial metallome: Composition and stability with specific reference to the anaerobic bacterium Desulfovibrio desulfuricans
    • Barton, L. L., Goulhen, F., Bruschi, M., Woodards, N. A., Plunkett, R. M. & Rietmeijer, F. J. M. (2007). The bacterial metallome: composition and stability with specific reference to the anaerobic bacterium Desulfovibrio desulfuricans. Biometals 20, 291-302.
    • (2007) Biometals , vol.20 , pp. 291-302
    • Barton, L.L.1    Goulhen, F.2    Bruschi, M.3    Woodards, N.A.4    Plunkett, R.M.5    Rietmeijer, F.J.M.6
  • 7
    • 0036408363 scopus 로고    scopus 로고
    • Gene and protein expression profiles of Shewanella oneidensis during anaerobic growth with different electron acceptors
    • other authors
    • Beliaev, A. S., Thompson, D. K., Khare, T., Lim, H., Brandt, C. C., Li, G., Murray, A. E., Heidelberg, J. F., Giometti, C. S. & other authors (2002). Gene and protein expression profiles of Shewanella oneidensis during anaerobic growth with different electron acceptors. OMICS 6, 39-60.
    • (2002) OMICS , vol.6 , pp. 39-60
    • Beliaev, A.S.1    Thompson, D.K.2    Khare, T.3    Lim, H.4    Brandt, C.C.5    Li, G.6    Murray, A.E.7    Heidelberg, J.F.8    Giometti, C.S.9
  • 8
    • 0032431903 scopus 로고    scopus 로고
    • Cytochrome P460 genes from the methanotroph Methylococcus capsulatus Bath
    • Bergmann, D. J., Zahn, J. A., Hooper, A. B. & DiSpirito, A. A. (1998). Cytochrome P460 genes from the methanotroph Methylococcus capsulatus Bath. J Bacteriol 180, 6440-6445.
    • (1998) J Bacteriol , vol.180 , pp. 6440-6445
    • Bergmann, D.J.1    Zahn, J.A.2    Hooper, A.B.3    Dispirito, A.A.4
  • 10
    • 2942582315 scopus 로고    scopus 로고
    • MacA, a diheme c-type cytochrome involved in Fe(III) reduction by Geobacter sulfurreducens
    • Butler, J. E., Kaufmann, F., Coppi, M. V., Núñez, C. & Lovley, D. R. (2004). MacA, a diheme c-type cytochrome involved in Fe(III) reduction by Geobacter sulfurreducens. J Bacteriol 186, 4042-4045.
    • (2004) J Bacteriol , vol.186 , pp. 4042-4045
    • Butler, J.E.1    Kaufmann, F.2    Coppi, M.V.3    Núñez, C.4    Lovley, D.R.5
  • 11
    • 30744454041 scopus 로고    scopus 로고
    • Genetic characterization of a single bifunctional enzyme for fumarate reduction and succinate oxidation in Geobacter sulfurreducens and engineering of fumarate reduction in Geobacter metallireducens
    • Butler, J. E., Glaven, R. H., Esteve-Núñez, A., Núñez, C., Shelobolina, E. S., Bond, D. R. & Lovley, D. R. (2006). Genetic characterization of a single bifunctional enzyme for fumarate reduction and succinate oxidation in Geobacter sulfurreducens and engineering of fumarate reduction in Geobacter metallireducens. J Bacteriol 188, 450-455.
    • (2006) J Bacteriol , vol.188 , pp. 450-455
    • Butler, J.E.1    Glaven, R.H.2    Esteve-Núñez, A.3    Núñez, C.4    Shelobolina, E.S.5    Bond, D.R.6    Lovley, D.R.7
  • 12
    • 77349123810 scopus 로고    scopus 로고
    • Evolution of electron transfer out of the cell: Comparative genomics of six Geobacter genomes
    • Butler, J. E., Young, N. D. & Lovley, D. R. (2010). Evolution of electron transfer out of the cell: comparative genomics of six Geobacter genomes. BMC Genomics 11, 40.
    • (2010) BMC Genomics , vol.11 , pp. 40
    • Butler, J.E.1    Young, N.D.2    Lovley, D.R.3
  • 13
    • 84866006487 scopus 로고    scopus 로고
    • Comparative genomic analysis of Geobacter sulfurreducens KN400, a strain with enhanced capacity for extracellular electron transfer and electricity production
    • Butler, J. E., Young, N. D., Aklujkar, M. & Lovley, D. R. (2012). Comparative genomic analysis of Geobacter sulfurreducens KN400, a strain with enhanced capacity for extracellular electron transfer and electricity production. BMC Genomics 13, 471.
    • (2012) BMC Genomics , vol.13 , pp. 471
    • Butler, J.E.1    Young, N.D.2    Aklujkar, M.3    Lovley, D.R.4
  • 14
    • 0037129202 scopus 로고    scopus 로고
    • Geobacter metallireducens accesses insoluble Fe(III) oxide by chemotaxis
    • Childers, S. E., Ciufo, S. & Lovley, D. R. (2002). Geobacter metallireducens accesses insoluble Fe(III) oxide by chemotaxis. Nature 416, 767-769.
    • (2002) Nature , vol.416 , pp. 767-769
    • Childers, S.E.1    Ciufo, S.2    Lovley, D.R.3
  • 15
    • 0035407383 scopus 로고    scopus 로고
    • Development of a genetic system for Geobacter sulfurreducens
    • Coppi, M. V., Leang, C., Sandler, S. J. & Lovley, D. R. (2001). Development of a genetic system for Geobacter sulfurreducens. Appl Environ Microbiol 67, 3180-3187.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 3180-3187
    • Coppi, M.V.1    Leang, C.2    Sandler, S.J.3    Lovley, D.R.4
  • 16
    • 2342553511 scopus 로고    scopus 로고
    • Identification of an uptake hydrogenase required for hydrogen-dependent reduction of Fe(III) and other electron acceptors by Geobacter sulfurreducens
    • Coppi, M. V., O'Neil, R. A. & Lovley, D. R. (2004). Identification of an uptake hydrogenase required for hydrogen-dependent reduction of Fe(III) and other electron acceptors by Geobacter sulfurreducens. J Bacteriol 186, 3022-3028.
    • (2004) J Bacteriol , vol.186 , pp. 3022-3028
    • Coppi, M.V.1    O'Neil, R.A.2    Lovley, D.R.3
  • 17
    • 35448933577 scopus 로고    scopus 로고
    • Involvement of Geobacter sulfurreducens SfrAB in acetate metabolism rather than intracellular, respiration-linked Fe(III) citrate reduction
    • Coppi, M. V., O'Neil, R. A., Leang, C., Kaufmann, F., Methé, B. A., Nevin, K. P., Woodard, T. L., Liu, A. & Lovley, D. R. (2007). Involvement of Geobacter sulfurreducens SfrAB in acetate metabolism rather than intracellular, respiration-linked Fe(III) citrate reduction. Microbiology 153, 3572-3585.
    • (2007) Microbiology , vol.153 , pp. 3572-3585
    • Coppi, M.V.1    O'Neil, R.A.2    Leang, C.3    Kaufmann, F.4    Methé, B.A.5    Nevin, K.P.6    Woodard, T.L.7    Liu, A.8    Lovley, D.R.9
  • 18
    • 0026527826 scopus 로고
    • Enzymatic iron oxidation by Leptothrix discophora: Identification of an iron-oxidizing protein
    • Corstjens, P. L. A. M., de Vrind, J. P. M., Westbroek, P. & de Vrind-de Jong, E. W. (1992). Enzymatic iron oxidation by Leptothrix discophora: identification of an iron-oxidizing protein. Appl Environ Microbiol 58, 450-454.
    • (1992) Appl Environ Microbiol , vol.58 , pp. 450-454
    • Corstjens, P.L.A.M.1    de Vrind, J.P.M.2    Westbroek, P.3
  • 20
    • 54549114308 scopus 로고    scopus 로고
    • Proteome of Geobacter sulfurreducens grown with Fe(III) oxide or Fe(III) citrate as the electron acceptor
    • Ding, Y. H. R., Hixson, K. K., Aklujkar, M. A., Lipton, M. S., Smith, R. D., Lovley, D. R. & Mester, T. (2008). Proteome of Geobacter sulfurreducens grown with Fe(III) oxide or Fe(III) citrate as the electron acceptor. Biochim Biophys Acta 1784, 1935-1941.
    • (2008) Biochim Biophys Acta , vol.1784 , pp. 1935-1941
    • Ding, Y.H.R.1    Hixson, K.K.2    Aklujkar, M.A.3    Lipton, M.S.4    Smith, R.D.5    Lovley, D.R.6    Mester, T.7
  • 23
    • 34248531753 scopus 로고    scopus 로고
    • Locating proteins in the cell using TargetP, SignalP and related tools
    • Emanuelsson, O., Brunak, S., von Heijne, G. & Nielsen, H. (2007). Locating proteins in the cell using TargetP, SignalP and related tools. Nat Protoc 2, 953-971.
    • (2007) Nat Protoc , vol.2 , pp. 953-971
    • Emanuelsson, O.1    Brunak, S.2    von Heijne, G.3    Nielsen, H.4
  • 24
    • 0038143259 scopus 로고    scopus 로고
    • Crystal structure of a bacterial endospore coat component. A laccase with enhanced thermostability properties
    • Enguita, F. J., Martins, L. O., Henriques, A. O. & Carrondo, M. A. (2003). Crystal structure of a bacterial endospore coat component. A laccase with enhanced thermostability properties. J Biol Chem 278, 19416-19425.
    • (2003) J Biol Chem , vol.278 , pp. 19416-19425
    • Enguita, F.J.1    Martins, L.O.2    Henriques, A.O.3    Carrondo, M.A.4
  • 25
    • 38049139132 scopus 로고    scopus 로고
    • Fluorescent properties of c-type cytochromes reveal their potential role as an extracytoplasmic electron sink in Geobacter sulfurreducens
    • Esteve-Núñez, A., Sosnik, J., Visconti, P. & Lovley, D. R. (2008). Fluorescent properties of c-type cytochromes reveal their potential role as an extracytoplasmic electron sink in Geobacter sulfurreducens. Environ Microbiol 10, 497-505.
    • (2008) Environ Microbiol , vol.10 , pp. 497-505
    • Esteve-Núñez, A.1    Sosnik, J.2    Visconti, P.3    Lovley, D.R.4
  • 26
    • 14644406240 scopus 로고    scopus 로고
    • Transcriptional regulation of a hybrid cluster (prismane) protein
    • Filenko, N. A., Browning, D. F. & Cole, J. A. (2005). Transcriptional regulation of a hybrid cluster (prismane) protein. Biochem Soc Trans 33, 195-197.
    • (2005) Biochem Soc Trans , vol.33 , pp. 195-197
    • Filenko, N.A.1    Browning, D.F.2    Cole, J.A.3
  • 28
    • 0040412793 scopus 로고
    • Nitrogenase and nitrogenase reductase associate and dissociate with each catalytic cycle
    • Hageman, R. V. & Burris, R. H. (1978). Nitrogenase and nitrogenase reductase associate and dissociate with each catalytic cycle. Proc Natl Acad Sci U S A 75, 2699-2702.
    • (1978) Proc Natl Acad Sci U S A , vol.75 , pp. 2699-2702
    • Hageman, R.V.1    Burris, R.H.2
  • 30
    • 24944572187 scopus 로고    scopus 로고
    • Structural and biochemical characterization of DHC2, a novel diheme cytochrome c from Geobacter sulfurreducens
    • Heitmann, D. & Einsle, O. (2005). Structural and biochemical characterization of DHC2, a novel diheme cytochrome c from Geobacter sulfurreducens. Biochemistry 44, 12411-12419.
    • (2005) Biochemistry , vol.44 , pp. 12411-12419
    • Heitmann, D.1    Einsle, O.2
  • 31
    • 49749140771 scopus 로고    scopus 로고
    • Pseudo-merohedral twinning in crystals of the dihaem c-type cytochrome DHC2 from Geobacter sulfurreducens
    • Heitmann, D. & Einsle, O. (2008). Pseudo-merohedral twinning in crystals of the dihaem c-type cytochrome DHC2 from Geobacter sulfurreducens. Acta Crystallogr D Biol Crystallogr 64, 993-999.
    • (2008) Acta Crystallogr D Biol Crystallogr , vol.64 , pp. 993-999
    • Heitmann, D.1    Einsle, O.2
  • 32
    • 0000207681 scopus 로고
    • TMbase-a database of membranespanning protein segments
    • Hofmann, K. & Stoffel, W. (1993). TMbase-a database of membranespanning protein segments. Biol Chem Hoppe Seyler 374, 374.
    • (1993) Biol Chem Hoppe Seyler , vol.374 , pp. 374
    • Hofmann, K.1    Stoffel, W.2
  • 33
    • 10444268971 scopus 로고    scopus 로고
    • In situ expression of nifD in Geobacteraceae in subsurface sediments
    • Holmes, D. E., Nevin, K. P. & Lovley, D. R. (2004). In situ expression of nifD in Geobacteraceae in subsurface sediments. Appl Environ Microbiol 70, 7251-7259.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 7251-7259
    • Holmes, D.E.1    Nevin, K.P.2    Lovley, D.R.3
  • 34
    • 46249094501 scopus 로고    scopus 로고
    • Genes for two multicopper proteins required for Fe(III) oxide reduction in Geobacter sulfurreducens have different expression patterns both in the subsurface and on energy-harvesting electrodes
    • Holmes, D. E., Mester, T., O'Neil, R. A., Perpetua, L. A., Larrahondo, M. J., Glaven, R., Sharma, M. L., Ward, J. E., Nevin, K. P. & Lovley, D. R. (2008). Genes for two multicopper proteins required for Fe(III) oxide reduction in Geobacter sulfurreducens have different expression patterns both in the subsurface and on energy-harvesting electrodes. Microbiology 154, 1422-1435.
    • (2008) Microbiology , vol.154 , pp. 1422-1435
    • Holmes, D.E.1    Mester, T.2    O'Neil, R.A.3    Perpetua, L.A.4    Larrahondo, M.J.5    Glaven, R.6    Sharma, M.L.7    Ward, J.E.8    Nevin, K.P.9    Lovley, D.R.10
  • 37
    • 0034864186 scopus 로고    scopus 로고
    • CotA of Bacillus subtilis is a copper-dependent laccase
    • Hullo, M. F., Moszer, I., Danchin, A. & Martin-Verstraete, I. (2001). CotA of Bacillus subtilis is a copper-dependent laccase. J Bacteriol 183, 5426-5430.
    • (2001) J Bacteriol , vol.183 , pp. 5426-5430
    • Hullo, M.F.1    Moszer, I.2    Danchin, A.3    Martin-Verstraete, I.4
  • 38
    • 77953637460 scopus 로고    scopus 로고
    • Purification and characterization of OmcZ, an outer-surface, octaheme c-type cytochrome essential for optimal current production by Geobacter sulfurreducens
    • Inoue, K., Qian, X., Morgado, L., Kim, B. C., Mester, T., Izallalen, M., Salgueiro, C. A. & Lovley, D. R. (2010). Purification and characterization of OmcZ, an outer-surface, octaheme c-type cytochrome essential for optimal current production by Geobacter sulfurreducens. Appl Environ Microbiol 76, 3999-4007.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 3999-4007
    • Inoue, K.1    Qian, X.2    Morgado, L.3    Kim, B.C.4    Mester, T.5    Izallalen, M.6    Salgueiro, C.A.7    Lovley, D.R.8
  • 39
    • 79951630868 scopus 로고    scopus 로고
    • Specific localization of the c-type cytochrome OmcZ at the anode surface in current-producing biofilms of Geobacter sulfurreducens
    • Inoue, K., Leang, C., Franks, A. E., Woodard, T. L., Nevin, K. P. & Lovley, D. R. (2011). Specific localization of the c-type cytochrome OmcZ at the anode surface in current-producing biofilms of Geobacter sulfurreducens. Environ Microbiol Rep 3, 211-217.
    • (2011) Environ Microbiol Rep , vol.3 , pp. 211-217
    • Inoue, K.1    Leang, C.2    Franks, A.E.3    Woodard, T.L.4    Nevin, K.P.5    Lovley, D.R.6
  • 40
    • 69949120097 scopus 로고    scopus 로고
    • Periplasmic nitrate reduction in Wolinella succinogenes: Cytoplasmic NapF facilitates NapA maturation and requires the menaquinol dehydrogenase NapH for membrane attachment
    • Kern, M. & Simon, J. (2009). Periplasmic nitrate reduction in Wolinella succinogenes: cytoplasmic NapF facilitates NapA maturation and requires the menaquinol dehydrogenase NapH for membrane attachment. Microbiology 155, 2784-2794.
    • (2009) Microbiology , vol.155 , pp. 2784-2794
    • Kern, M.1    Simon, J.2
  • 41
    • 80052636384 scopus 로고    scopus 로고
    • The oxidative and nitrosative stress defence network of Wolinella succinogenes: Cytochrome c nitrite reductase mediates the stress response to nitrite, nitric oxide, hydroxylamine and hydrogen peroxide
    • Kern, M., Volz, J. & Simon, J. (2011). The oxidative and nitrosative stress defence network of Wolinella succinogenes: cytochrome c nitrite reductase mediates the stress response to nitrite, nitric oxide, hydroxylamine and hydrogen peroxide. Environ Microbiol 13, 2478-2494.
    • (2011) Environ Microbiol , vol.13 , pp. 2478-2494
    • Kern, M.1    Volz, J.2    Simon, J.3
  • 42
    • 47849099320 scopus 로고    scopus 로고
    • Investigation of direct vs. indirect involvement of the c-type cytochrome MacA in Fe(III) reduction by Geobacter sulfurreducens
    • Kim, B. C. & Lovley, D. R. (2008). Investigation of direct vs. indirect involvement of the c-type cytochrome MacA in Fe(III) reduction by Geobacter sulfurreducens. FEMS Microbiol Lett 286, 39-44.
    • (2008) FEMS Microbiol Lett , vol.286 , pp. 39-44
    • Kim, B.C.1    Lovley, D.R.2
  • 43
    • 21144443141 scopus 로고    scopus 로고
    • OmcF, a putative c-type monoheme outer membrane cytochrome required for the expression of other outer membrane cytochromes in Geobacter sulfurreducens
    • Kim, B. C., Leang, C., Ding, Y. H. R., Glaven, R. H., Coppi, M. V. & Lovley, D. R. (2005). OmcF, a putative c-type monoheme outer membrane cytochrome required for the expression of other outer membrane cytochromes in Geobacter sulfurreducens. J Bacteriol 187, 4505-4513.
    • (2005) J Bacteriol , vol.187 , pp. 4505-4513
    • Kim, B.C.1    Leang, C.2    Ding, Y.H.R.3    Glaven, R.H.4    Coppi, M.V.5    Lovley, D.R.6
  • 44
    • 33645981243 scopus 로고    scopus 로고
    • Two putative c-type multiheme cytochromes required for the expression of OmcB, an outer membrane protein essential for optimal Fe(III) reduction in Geobacter sulfurreducens
    • Kim, B. C., Qian, X. L., Leang, C., Coppi, M. V. & Lovley, D. R. (2006). Two putative c-type multiheme cytochromes required for the expression of OmcB, an outer membrane protein essential for optimal Fe(III) reduction in Geobacter sulfurreducens. J Bacteriol 188, 3138-3142.
    • (2006) J Bacteriol , vol.188 , pp. 3138-3142
    • Kim, B.C.1    Qian, X.L.2    Leang, C.3    Coppi, M.V.4    Lovley, D.R.5
  • 45
    • 0028793123 scopus 로고
    • Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes
    • Kovach, M. E., Elzer, P. H., Hill, D. S., Robertson, G. T., Farris, M. A., Roop, R. M., II & Peterson, K. M. (1995). Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. Gene 166, 175-176.
    • (1995) Gene , vol.166 , pp. 175-176
    • Kovach, M.E.1    Elzer, P.H.2    Hill, D.S.3    Robertson, G.T.4    Farris, M.A.5    Roop II, R.M.6    Peterson, K.M.7
  • 46
    • 0037379469 scopus 로고    scopus 로고
    • OmcB, a c-type polyheme cytochrome, involved in Fe(III) reduction in Geobacter sulfurreducens
    • Leang, C., Coppi, M. V. & Lovley, D. R. (2003). OmcB, a c-type polyheme cytochrome, involved in Fe(III) reduction in Geobacter sulfurreducens. J Bacteriol 185, 2096-2103.
    • (2003) J Bacteriol , vol.185 , pp. 2096-2103
    • Leang, C.1    Coppi, M.V.2    Lovley, D.R.3
  • 47
    • 24344443251 scopus 로고    scopus 로고
    • Adaptation to disruption of the electron transfer pathway for Fe(III) reduction in Geobacter sulfurreducens
    • Leang, C., Adams, L. A., Chin, K. J., Nevin, K. P., Methé, B. A., Webster, J., Sharma, M. L. & Lovley, D. R. (2005). Adaptation to disruption of the electron transfer pathway for Fe(III) reduction in Geobacter sulfurreducens. J Bacteriol 187, 5918-5926.
    • (2005) J Bacteriol , vol.187 , pp. 5918-5926
    • Leang, C.1    Adams, L.A.2    Chin, K.J.3    Nevin, K.P.4    Methé, B.A.5    Webster, J.6    Sharma, M.L.7    Lovley, D.R.8
  • 48
    • 77953645311 scopus 로고    scopus 로고
    • Alignment of the c-type cytochrome OmcS along pili of Geobacter sulfurreducens
    • Leang, C., Qian, X., Mester, T. & Lovley, D. R. (2010). Alignment of the c-type cytochrome OmcS along pili of Geobacter sulfurreducens. Appl Environ Microbiol 76, 4080-4084.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 4080-4084
    • Leang, C.1    Qian, X.2    Mester, T.3    Lovley, D.R.4
  • 49
    • 3843070019 scopus 로고    scopus 로고
    • Geobacter sulfurreducens can grow with oxygen as a terminal electron acceptor
    • Lin, W. C., Coppi, M. V. & Lovley, D. R. (2004). Geobacter sulfurreducens can grow with oxygen as a terminal electron acceptor. Appl Environ Microbiol 70, 2525-2528.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 2525-2528
    • Lin, W.C.1    Coppi, M.V.2    Lovley, D.R.3
  • 50
    • 69949110616 scopus 로고    scopus 로고
    • How Geobacteraceae may dominate subsurface biodegradation: Physiology of Geobacter metallireducens in slow-growth habitat-simulating retentostats
    • Lin, B., Westerhoff, H. V. & Roling, W. F. (2009). How Geobacteraceae may dominate subsurface biodegradation: physiology of Geobacter metallireducens in slow-growth habitat-simulating retentostats. Environ Microbiol 11, 2425-2433.
    • (2009) Environ Microbiol , vol.11 , pp. 2425-2433
    • Lin, B.1    Westerhoff, H.V.2    Roling, W.F.3
  • 51
    • 0037266296 scopus 로고    scopus 로고
    • Biochemical and genetic characterization of PpcA, a periplasmic c-type cytochrome in Geobacter sulfurreducens
    • Lloyd, J. R., Leang, C., Hodges Myerson, A. L., Coppi, M. V., Ciufo, S., Methe, B., Sandler, S. J. & Lovley, D. R. (2003). Biochemical and genetic characterization of PpcA, a periplasmic c-type cytochrome in Geobacter sulfurreducens. Biochem J 369, 153-161.
    • (2003) Biochem J , vol.369 , pp. 153-161
    • Lloyd, J.R.1    Leang, C.2    Hodges, M.A.L.3    Coppi, M.V.4    Ciufo, S.5    Methe, B.6    Sandler, S.J.7    Lovley, D.R.8
  • 52
    • 77956852564 scopus 로고
    • Microbial reduction of iron, manganese, and other metals
    • Lovley, D. R. (1995). Microbial reduction of iron, manganese, and other metals. Adv Agron 54, 175-231.
    • (1995) Adv Agron , vol.54 , pp. 175-231
    • Lovley, D.R.1
  • 53
    • 44349126251 scopus 로고    scopus 로고
    • Extracellular electron transfer: Wires, capacitors, iron lungs, and more
    • Lovley, D. R. (2008). Extracellular electron transfer: wires, capacitors, iron lungs, and more. Geobiology 6, 225-231.
    • (2008) Geobiology , vol.6 , pp. 225-231
    • Lovley, D.R.1
  • 54
    • 82555168002 scopus 로고    scopus 로고
    • Live wires: Direct extracellular electron exchange for bioenergy and the bioremediation of energy-related contamination
    • Lovley, D. R. (2011). Live wires: direct extracellular electron exchange for bioenergy and the bioremediation of energy-related contamination. Energy Environ Sci 4, 4896-4906.
    • (2011) Energy Environ Sci , vol.4 , pp. 4896-4906
    • Lovley, D.R.1
  • 55
    • 0000209741 scopus 로고
    • Organic matter mineralization with reduction of ferric iron in anaerobic sediments
    • Lovley, D. R. & Phillips, E. J. P. (1986). Organic matter mineralization with reduction of ferric iron in anaerobic sediments. Appl Environ Microbiol 51, 683-689.
    • (1986) Appl Environ Microbiol , vol.51 , pp. 683-689
    • Lovley, D.R.1    Phillips, E.J.P.2
  • 56
    • 0024191542 scopus 로고
    • Novel mode of microbial energy metabolism: Organic carbon oxidation coupled to dissimilatory reduction of iron or manganese
    • Lovley, D. R. & Phillips, E. J. P. (1988). Novel mode of microbial energy metabolism: organic carbon oxidation coupled to dissimilatory reduction of iron or manganese. Appl Environ Microbiol 54, 1472-1480.
    • (1988) Appl Environ Microbiol , vol.54 , pp. 1472-1480
    • Lovley, D.R.1    Phillips, E.J.P.2
  • 57
    • 7044222207 scopus 로고    scopus 로고
    • Dissimilatory Fe(III) and Mn(IV) reduction
    • Edited by R. K. Poole. Amsterdam: Elsevier
    • Lovley, D. R., Holmes, D. E. & Nevin, K. P. (2004). Dissimilatory Fe(III) and Mn(IV) reduction. In Advances in Microbial Physiology, vol. 49, pp. 219-286. Edited by R. K. Poole. Amsterdam: Elsevier
    • (2004) Advances In Microbial Physiology , vol.49 , pp. 219-286
    • Lovley, D.R.1    Holmes, D.E.2    Nevin, K.P.3
  • 59
    • 78650298909 scopus 로고    scopus 로고
    • In situ to in silico and back: Elucidating the physiology and ecology of Geobacter spp. using genome-scale modelling
    • Mahadevan, R., Palsson, B. O. & Lovley, D. R. (2011). In situ to in silico and back: elucidating the physiology and ecology of Geobacter spp. using genome-scale modelling. Nat Rev Microbiol 9, 39-50.
    • (2011) Nat Rev Microbiol , vol.9 , pp. 39-50
    • Mahadevan, R.1    Palsson, B.O.2    Lovley, D.R.3
  • 60
    • 84861842701 scopus 로고    scopus 로고
    • Microbial nanowires: A new paradigm for biological electron transfer and bioelectronics
    • Malvankar, N. S. & Lovley, D. R. (2012). Microbial nanowires: a new paradigm for biological electron transfer and bioelectronics. ChemSusChem 5, 1039-1046.
    • (2012) ChemSusChem , vol.5 , pp. 1039-1046
    • Malvankar, N.S.1    Lovley, D.R.2
  • 62
    • 29144451480 scopus 로고    scopus 로고
    • Outer membrane c-type cytochromes required for Fe(III) and Mn(IV) oxide reduction in Geobacter sulfurreducens
    • Mehta, T., Coppi, M. V., Childers, S. E. & Lovley, D. R. (2005). Outer membrane c-type cytochromes required for Fe(III) and Mn(IV) oxide reduction in Geobacter sulfurreducens. Appl Environ Microbiol 71, 8634-8641.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 8634-8641
    • Mehta, T.1    Coppi, M.V.2    Childers, S.E.3    Lovley, D.R.4
  • 63
    • 33747119626 scopus 로고    scopus 로고
    • A putative multicopper protein secreted by an atypical type II secretion system involved in the reduction of insoluble electron acceptors in Geobacter sulfurreducens
    • Mehta, T., Childers, S. E., Glaven, R., Lovley, D. R. & Mester, T. (2006). A putative multicopper protein secreted by an atypical type II secretion system involved in the reduction of insoluble electron acceptors in Geobacter sulfurreducens. Microbiology 152, 2257-2264.
    • (2006) Microbiology , vol.152 , pp. 2257-2264
    • Mehta, T.1    Childers, S.E.2    Glaven, R.3    Lovley, D.R.4    Mester, T.5
  • 64
    • 17644418853 scopus 로고    scopus 로고
    • DNA microarray analysis of nitrogen fixation and Fe(III) reduction in Geobacter sulfurreducens
    • Methé, B. A., Webster, J., Nevin, K., Butler, J. & Lovley, D. R. (2005). DNA microarray analysis of nitrogen fixation and Fe(III) reduction in Geobacter sulfurreducens. Appl Environ Microbiol 71, 2530-2538.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 2530-2538
    • Methé, B.A.1    Webster, J.2    Nevin, K.3    Butler, J.4    Lovley, D.R.5
  • 65
    • 82355175841 scopus 로고    scopus 로고
    • Revealing the structural origin of the redox-Bohr effect: The first solution structure of a cytochrome from Geobacter sulfurreducens
    • Morgado, L., Paixao, V. B., Schiffer, M., Pokkuluri, P. R., Bruix, M. & Salgueiro, C. A. (2012). Revealing the structural origin of the redox-Bohr effect: the first solution structure of a cytochrome from Geobacter sulfurreducens. Biochem J 441, 179-187.
    • (2012) Biochem J , vol.441 , pp. 179-187
    • Morgado, L.1    Paixao, V.B.2    Schiffer, M.3    Pokkuluri, P.R.4    Bruix, M.5    Salgueiro, C.A.6
  • 66
    • 63349088137 scopus 로고    scopus 로고
    • Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation
    • Mouser, P. J., Holmes, D. E., Perpetua, L. A., DiDonato, R., Postier, B., Liu, A. & Lovley, D. R. (2009). Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation. ISME J 3, 454-465.
    • (2009) ISME J , vol.3 , pp. 454-465
    • Mouser, P.J.1    Holmes, D.E.2    Perpetua, L.A.3    Didonato, R.4    Postier, B.5    Liu, A.6    Lovley, D.R.7
  • 67
    • 0034100017 scopus 로고    scopus 로고
    • Lack of production of electronshuttling compounds or solubilization of Fe(III) during reduction of insoluble Fe(III) oxide by Geobacter metallireducens
    • Nevin, K. P. & Lovley, D. R. (2000). Lack of production of electronshuttling compounds or solubilization of Fe(III) during reduction of insoluble Fe(III) oxide by Geobacter metallireducens. Appl Environ Microbiol 66, 2248-2251.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 2248-2251
    • Nevin, K.P.1    Lovley, D.R.2
  • 68
    • 0036252368 scopus 로고    scopus 로고
    • Mechanisms for Fe(III) oxide reduction in sedimentary environments
    • Nevin, K. P. & Lovley, D. R. (2002). Mechanisms for Fe(III) oxide reduction in sedimentary environments. Geomicrobiol J 19, 141-159.
    • (2002) Geomicrobiol J , vol.19 , pp. 141-159
    • Nevin, K.P.1    Lovley, D.R.2
  • 69
    • 66249098568 scopus 로고    scopus 로고
    • Anode biofilm transcriptomics reveals outer surface components essential for high density current production in Geobacter sulfurreducens fuel cells
    • other authors
    • Nevin, K. P., Kim, B. C., Glaven, R. H., Johnson, J. P., Woodard, T. L., Methé, B. A., Didonato, R. J., Covalla, S. F., Franks, A. E. & other authors (2009). Anode biofilm transcriptomics reveals outer surface components essential for high density current production in Geobacter sulfurreducens fuel cells. PLoS ONE 4, e5628.
    • (2009) PLoS ONE , vol.4
    • Nevin, K.P.1    Kim, B.C.2    Glaven, R.H.3    Johnson, J.P.4    Woodard, T.L.5    Methé, B.A.6    Didonato, R.J.7    Covalla, S.F.8    Franks, A.E.9
  • 71
    • 0023525477 scopus 로고
    • Determination of Fe(III) and Fe(II) in oxalate extracts of sediment
    • Phillips, E. J. P. & Lovley, D. R. (1987). Determination of Fe(III) and Fe(II) in oxalate extracts of sediment. Soil Sci Soc Am J 51, 938-941.
    • (1987) Soil Sci Soc Am J , vol.51 , pp. 938-941
    • Phillips, E.J.P.1    Lovley, D.R.2
  • 72
    • 79952445217 scopus 로고    scopus 로고
    • Structure of a novel dodecaheme cytochrome c from Geobacter sulfurreducens reveals an extended 12 nm protein with interacting hemes
    • other authors
    • Pokkuluri, P. R., Londer, Y. Y., Duke, N. E. C., Pessanha, M., Yang, X., Orshonsky, V., Orshonsky, L., Erickson, J., Zagyanskiy, Y. & other authors (2011). Structure of a novel dodecaheme cytochrome c from Geobacter sulfurreducens reveals an extended 12 nm protein with interacting hemes. J Struct Biol 174, 223-233.
    • (2011) J Struct Biol , vol.174 , pp. 223-233
    • Pokkuluri, P.R.1    Londer, Y.Y.2    Duke, N.E.C.3    Pessanha, M.4    Yang, X.5    Orshonsky, V.6    Orshonsky, L.7    Erickson, J.8    Zagyanskiy, Y.9
  • 73
    • 43649087453 scopus 로고    scopus 로고
    • Benefits of in-situ synthesized microarrays for analysis of gene expression in understudied microorganisms
    • Postier, B., Didonato, R., Jr, Nevin, K. P., Liu, A., Frank, B., Lovley, D. & Methe, B. A. (2008). Benefits of in-situ synthesized microarrays for analysis of gene expression in understudied microorganisms. J Microbiol Methods 74, 26-32.
    • (2008) J Microbiol Methods , vol.74 , pp. 26-32
    • Postier, B.1    Didonato Jr., R.2    Nevin, K.P.3    Liu, A.4    Frank, B.5    Lovley, D.6    Methe, B.A.7
  • 74
    • 35748955474 scopus 로고    scopus 로고
    • Evidence that OmcB and OmpB of Geobacter sulfurreducens are outer membrane surface proteins
    • Qian, X. L., Reguera, G., Mester, T. & Lovley, D. R. (2007). Evidence that OmcB and OmpB of Geobacter sulfurreducens are outer membrane surface proteins. FEMS Microbiol Lett 277, 21-27.
    • (2007) FEMS Microbiol Lett , vol.277 , pp. 21-27
    • Qian, X.L.1    Reguera, G.2    Mester, T.3    Lovley, D.R.4
  • 77
    • 67650032105 scopus 로고    scopus 로고
    • Cyclic voltammetry of biofilms of wild type and mutant Geobacter sulfurreducens on fuel cell anodes indicates possible roles of OmcB, OmcZ, type IV pili, and protons in extracellular electron transfer
    • Richter, H., Nevin, K. P., Jia, H. F., Lowy, D. A., Lovley, D. R. & Tender, L. M. (2009). Cyclic voltammetry of biofilms of wild type and mutant Geobacter sulfurreducens on fuel cell anodes indicates possible roles of OmcB, OmcZ, type IV pili, and protons in extracellular electron transfer. Energy Environ Sci 2, 506-516.
    • (2009) Energy Environ Sci , vol.2 , pp. 506-516
    • Richter, H.1    Nevin, K.P.2    Jia, H.F.3    Lowy, D.A.4    Lovley, D.R.5    Tender, L.M.6
  • 78
    • 84861371422 scopus 로고    scopus 로고
    • Two isoforms of Geobacter sulfurreducens PilA have distinct roles in pilus biogenesis, cytochrome localization, extracellular electron transfer, and biofilm formation
    • Richter, L. V., Sandler, S. J. & Weis, R. M. (2012). Two isoforms of Geobacter sulfurreducens PilA have distinct roles in pilus biogenesis, cytochrome localization, extracellular electron transfer, and biofilm formation. J Bacteriol 194, 2551-2563.
    • (2012) J Bacteriol , vol.194 , pp. 2551-2563
    • Richter, L.V.1    Sandler, S.J.2    Weis, R.M.3
  • 79
    • 53449083335 scopus 로고    scopus 로고
    • Highly conserved genes in Geobacter species with expression patterns indicative of acetate limitation
    • Risso, C., Methé, B. A., Elifantz, H., Holmes, D. E. & Lovley, D. R. (2008). Highly conserved genes in Geobacter species with expression patterns indicative of acetate limitation. Microbiology 154, 2589-2599.
    • (2008) Microbiology , vol.154 , pp. 2589-2599
    • Risso, C.1    Methé, B.A.2    Elifantz, H.3    Holmes, D.E.4    Lovley, D.R.5
  • 80
    • 33845697320 scopus 로고    scopus 로고
    • X-ray structure of the membrane-bound cytochrome c quinol dehydrogenase NrfH reveals novel haem coordination
    • Rodrigues, M. L., Oliveira, T. F., Pereira, I. A. C. & Archer, M. (2006). X-ray structure of the membrane-bound cytochrome c quinol dehydrogenase NrfH reveals novel haem coordination. EMBO J 25, 5951-5960.
    • (2006) EMBO J , vol.25 , pp. 5951-5960
    • Rodrigues, M.L.1    Oliveira, T.F.2    Pereira, I.A.C.3    Archer, M.4
  • 81
    • 67649391055 scopus 로고    scopus 로고
    • Identification of genes involved in biofilm formation and respiration via mini-Himar transposon mutagenesis of Geobacter sulfurreducens
    • Rollefson, J. B., Levar, C. E. & Bond, D. R. (2009). Identification of genes involved in biofilm formation and respiration via mini-Himar transposon mutagenesis of Geobacter sulfurreducens. J Bacteriol 191, 4207-4217.
    • (2009) J Bacteriol , vol.191 , pp. 4207-4217
    • Rollefson, J.B.1    Levar, C.E.2    Bond, D.R.3
  • 82
    • 79951630056 scopus 로고    scopus 로고
    • Identification of an extracellular polysaccharide network essential for cytochrome anchoring and biofilm formation in Geobacter sulfurreducens
    • Rollefson, J. B., Stephen, C. S., Tien, M. & Bond, D. R. (2011). Identification of an extracellular polysaccharide network essential for cytochrome anchoring and biofilm formation in Geobacter sulfurreducens. J Bacteriol 193, 1023-1033.
    • (2011) J Bacteriol , vol.193 , pp. 1023-1033
    • Rollefson, J.B.1    Stephen, C.S.2    Tien, M.3    Bond, D.R.4
  • 83
    • 73249114332 scopus 로고    scopus 로고
    • Periplasmic electron transfer via the c-type cytochromes MtrA and FccA of Shewanella oneidensis MR-1
    • Schuetz, B., Schicklberger, M., Kuermann, J., Spormann, A. M. & Gescher, J. (2009). Periplasmic electron transfer via the c-type cytochromes MtrA and FccA of Shewanella oneidensis MR-1. Appl Environ Microbiol 75, 7789-7796.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 7789-7796
    • Schuetz, B.1    Schicklberger, M.2    Kuermann, J.3    Spormann, A.M.4    Gescher, J.5
  • 84
    • 80052714737 scopus 로고    scopus 로고
    • Investigation of the electron transport chain to and the catalytic activity of the diheme cytochrome c peroxidase CcpA of Shewanella oneidensis
    • Schutz, B., Seidel, J., Sturm, G., Einsle, O. & Gescher, J. (2011). Investigation of the electron transport chain to and the catalytic activity of the diheme cytochrome c peroxidase CcpA of Shewanella oneidensis. Appl Environ Microbiol 77, 6172-6180.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 6172-6180
    • Schutz, B.1    Seidel, J.2    Sturm, G.3    Einsle, O.4    Gescher, J.5
  • 87
    • 34250639301 scopus 로고    scopus 로고
    • Respiration of metal (hydr)oxides by Shewanella and Geobacter: A key role for multihaem c-type cytochromes
    • Shi, L., Squier, T. C., Zachara, J. M. & Fredrickson, J. K. (2007). Respiration of metal (hydr)oxides by Shewanella and Geobacter: a key role for multihaem c-type cytochromes. Mol Microbiol 65, 12-20.
    • (2007) Mol Microbiol , vol.65 , pp. 12-20
    • Shi, L.1    Squier, T.C.2    Zachara, J.M.3    Fredrickson, J.K.4
  • 88
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical Bayes methods for assessing differential expression in microarray experiments
    • Smyth, G. K. (2004). Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol 3, e3.
    • (2004) Stat Appl Genet Mol Biol , vol.3
    • Smyth, G.K.1
  • 89
    • 0242333835 scopus 로고    scopus 로고
    • Normalization of cDNA microarray data
    • Smyth, G. K. & Speed, T. (2003). Normalization of cDNA microarray data. Methods 31, 265-273.
    • (2003) Methods , vol.31 , pp. 265-273
    • Smyth, G.K.1    Speed, T.2
  • 91
    • 0033985228 scopus 로고    scopus 로고
    • Iron and oxidative stress in bacteria
    • Touati, D. (2000). Iron and oxidative stress in bacteria. Arch Biochem Biophys 373, 1-6.
    • (2000) Arch Biochem Biophys , vol.373 , pp. 1-6
    • Touati, D.1
  • 92
    • 84861217024 scopus 로고    scopus 로고
    • Role of the NiFe hydrogenase Hya in oxidative stress defense in Geobacter sulfurreducens
    • Tremblay, P. L. & Lovley, D. R. (2012). Role of the NiFe hydrogenase Hya in oxidative stress defense in Geobacter sulfurreducens. J Bacteriol 194, 2248-2253.
    • (2012) J Bacteriol , vol.194 , pp. 2248-2253
    • Tremblay, P.L.1    Lovley, D.R.2
  • 93
    • 78650778559 scopus 로고    scopus 로고
    • A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution
    • Tremblay, P. L., Summers, Z. M., Glaven, R. H., Nevin, K. P., Zengler, K., Barrett, C. L., Qiu, Y., Palsson, B. O. & Lovley, D. R. (2011). A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution. Environ Microbiol 13, 13-23.
    • (2011) Environ Microbiol , vol.13 , pp. 13-23
    • Tremblay, P.L.1    Summers, Z.M.2    Glaven, R.H.3    Nevin, K.P.4    Zengler, K.5    Barrett, C.L.6    Qiu, Y.7    Palsson, B.O.8    Lovley, D.R.9
  • 95
    • 78649809538 scopus 로고    scopus 로고
    • Novel regulatory cascades controlling expression of nitrogen-fixation genes in Geobacter sulfurreducens
    • Ueki, T. & Lovley, D. R. (2010). Novel regulatory cascades controlling expression of nitrogen-fixation genes in Geobacter sulfurreducens. Nucleic Acids Res 38, 7485-7499.
    • (2010) Nucleic Acids Res , vol.38 , pp. 7485-7499
    • Ueki, T.1    Lovley, D.R.2
  • 96
    • 77950283289 scopus 로고    scopus 로고
    • Role of Geobacter sulfurreducens outer surface c-type cytochromes in reduction of soil humic acid and anthraquinone-2,6-disulfonate
    • Voordeckers, J. W., Kim, B. C., Izallalen, M. & Lovley, D. R. (2010). Role of Geobacter sulfurreducens outer surface c-type cytochromes in reduction of soil humic acid and anthraquinone-2,6-disulfonate. Appl Environ Microbiol 76, 2371-2375.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 2371-2375
    • Voordeckers, J.W.1    Kim, B.C.2    Izallalen, M.3    Lovley, D.R.4
  • 97
    • 78751584992 scopus 로고    scopus 로고
    • Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments
    • Zhuang, K., Izallalen, M., Mouser, P., Richter, H., Risso, C., Mahadevan, R. & Lovley, D. R. (2011). Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments. ISME J 5, 305-316.
    • (2011) ISME J , vol.5 , pp. 305-316
    • Zhuang, K.1    Izallalen, M.2    Mouser, P.3    Richter, H.4    Risso, C.5    Mahadevan, R.6    Lovley, D.R.7


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