Potentiometric aptasensing based on target-induced conformational switch of a DNA probe using a polymeric membrane silver ion-selective electrode

Biosensors and Bioelectronics

Volumn 45, Issue 1, 2013, Pages 148-151

  Ding, Jiawang ^a,b,c   Qin, Wei ^a,b   Zhang, Yan ^a,b   Wang, Xuewei ^a,b  

^a YANTAI INSTITUTE OF COASTAL ZONE RESEARCH   (China)

^b YICCAS   (China)

^c UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

Author keywords

Aptasensing; Cytosine; Ion selective electrode; Potentiometry; Silver ions

Indexed keywords

APTAMERS; APTASENSING; BINDING SEQUENCE; CONFORMATIONAL CHANGE; CONFORMATIONAL SWITCHES; CYTOSINE; DETECTION LIMITS; DETECTION METHODS; DNA BASE PAIRS; DNA PROBE; HAIRPIN STRUCTURES; ION FLUXES; LABEL FREE; NEW APPLICATIONS; POTENTIAL RESPONSE; POTENTIOMETRIC; POTENTIOMETRIC ASSAY; POTENTIOMETRY; RELATIVE STANDARD DEVIATIONS; SILVER IONS; STRONG INTERACTION; TRIPHOSPHATE;

ION SELECTIVE ELECTRODES; NUCLEIC ACIDS; POLYMERIC MEMBRANES; POTENTIOMETERS (ELECTRIC MEASURING INSTRUMENTS); PROBES;

METAL IONS;

ADENOSINE TRIPHOSPHATE; APTAMER; CYTOSINE; POLYMER; SILVER;

ARTICLE; BASE PAIRING; BINDING AFFINITY; BINDING SITE; CHEMICAL STRUCTURE; CONFORMATIONAL TRANSITION; CONTROLLED STUDY; DNA BINDING; DNA PROBE; ELECTRODE; ION TRANSPORT; MOLECULAR DYNAMICS; POTENTIOMETRY; PROCESS DEVELOPMENT; QUANTITATIVE ANALYSIS; REACTION TIME; SENSITIVITY ANALYSIS; SEPARATION TECHNIQUE; SEQUENCE ANALYSIS;

APTAMERS, NUCLEOTIDE; BIOSENSING TECHNIQUES; CYTOSINE; DNA; DNA PROBES; ION-SELECTIVE ELECTRODES; LIMIT OF DETECTION; OLIGONUCLEOTIDES; POTENTIOMETRY; SILVER;

EID: 84874704231     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2013.01.052     Document Type: Article

References (45)

1. Bhakthavatsalam V., Shvarev A., Bakker E. Analyst 2006, 131:895-901.
2. Cai S., Lao K.M., Lau C., Lu J.Z. Analytical Chemistry 2011, 83:9702-9708.
3. Chumbimuni-Torres K.Y., Dai Z., Rubinova N., Xiang Y., Pretsch E., Wang J., Bakker E. Journal of the American Chemical Society 2006, 128:13676-13677.
4. Clever G.H., Kaul C., Carell T. Angewandte Chemie: International Edition 2007, 46:6226-6236.
5. Ding J.W., Qin W. Journal of the American Chemical Society 2009, 131:14640-14641.
6. Ding J.W., Qin W. Electroanalysis 2009, 21:2030-2035.
7. Ding J.W., Chen Y., Wang X.W., Qin W. Analytical Chemistry 2012, 84:2055-2061.
8. Freeman R., Finder T., Willner I. Angewandte Chemie: International Edition 2009, 48:7818-7821.
9. Guo H.M., Yin T.J., Su Q.M., Qin W. Talanta 2008, 75:851-855.
10. Kanayama N., Takarada T., Maeda M. Chemical Communications 2011, 47:2077-2079.
11. Lee J.S., Ulmann P.A., Han M.S., Mirkin C.A. Nano Letters 2008, 8:529-533.
12. Li B.L., Du Y., Dong S.J. Analytica Chimca Acta 2009, 644:78-82.
13. Li T., Shi L.L., Wang E.K., Dong S.J. Chemistry-A European Journal 2009, 15:3347-3350.
14. Li X.M., Sun L., Ding T.R. Biosensors and Bioelectronics 2011, 26:3570-3576.
15. Miyake Y., Ono A. Tetrahedron Letters 2005, 46:2441-2443.
16. Miyake Y., Togashi H., Tashiro M., Yamaguchi H., Oda S., Kudo M., Tanaka Y., Kondo Y., Sawa R., Fujimoto T., Machinami T., Ono A. Journal of the American Chemical Society 2006, 128:2172-2173.
17. Nagatoishi S., Nojima T., Juskowiak B., Takenaka S. Angewandte Chemie: International Edition 2005, 44:5067-5070.
18. Nutiu R., Li Y.F. Journal of the American Chemical Society 2003, 125:4771-4778.
19. Okamoto I., Iwamoto K., Watanabe Y., Miyake Y., Ono A. Angewandte Chemie: International Edition 2009, 48:1648-1651.
20. Ono A., Cao S., Togashi H., Tashiro M., Fujimoto T., Machinami T., Od S., Miyake Y., Okamoto I., Tanaka Y. Chemical Communications 2008, 44:4825-4827.
21. Ono A., Togashi H. Angewandte Chemie: International Edition 2004, 43:4300-4302.
22. Ono T., Yoshida K., Saotome Y., Sakabe R., Okamoto I., Ono A. Chemical Communications 2011, 47:1542-1544.
23. Park J.S., Choi W., Jang K., Na S. Biosensors and Bioelectronics 2013, 41:471-476.
24. Shvarev A., Bakker E. Journal of the American Chemical Society 2003, 125:11192-11193.
25. Sokalski T., Ceresa A., Zwickl T., Pretsch E. Journal of the American Chemical Society 1997, 119:11347-11348.
26. Sun B., Qi H.L., Ma F., Gao Q., Zhang C.X., Miao W.J. Analytical Chemistry 2010, 82:5046-5052.
27. Szigeti Z., Malon A., Vigassy T., Csokai V., Grün A., Wygladacz K., Ye N., Xu C., Chebny V.J., Bitter I., Rathore R., Bakker E., Pretsch E. Analytica Chimica Acta 2006, 572:1-10.
28. Tang C.X., Zhao Y., He X.W., Yin X.B. Chemical Communications 2010, 46:9022-9024.
29. Torigoe H., Kozasa T., Takamori A., Ono A. Nuclic Acids Symposium Series 2005, 49:217-218.
30. Ueyama H., Takagi M., Takenaka S. Journal of the American Chemical Society 2002, 124:14286-14287.
31. Wang J., Jiang Y.X., Zhou C.S., Fang X.H. Analytical Chemistry 2005, 77:3542-3546.
32. Wang Y.X., Li J.S., Jin J.Y., Wang H., Tang H.X., Yang R.H., Wang K.M. Analytical Chemistry 2009, 81:9703-9709.
33. Wang Y.X., Li J.S., Wang H., Jin J.Y., Liu J.H., Wang K.M., Tan W.H., Yang R.H. Analytical Chemistry 2010, 82:6607-6612.
34. Wen Q.Y., Xing F.F., He S.J., Song S.P., Wang L.H., Long Y.T., Li D., Fan C.H. Chemical Communications 2010, 2596-2598.
35. Wu D.H., Zhang Q., Chu X., Wang H.B., Shen G.L., Yu R.Q. Biosensors and Bioelectronics 2010, 25:1025-1031.
36. Wu J., Chumbimuni-Torres K.Y., Galik M., Thammakhet C., Haake D., Wang J. Analytical Chemistry 2009, 81:10009-10012.
37. Xie W.Y., Huang W.T., Li N.B., Luo H.Q. Chemical Communications 2012, 48:82-84.
38. Xu H., Hepel M. Analytical Chemistry 2011, 83:813-819.
39. Yan G.P., Wang Y.H., He X.X., Wang K.M., Su J., Chen Z.F., Qing Z.H. Talanta 2012, 94:178-183.
40. Yang H., Rys A.Z., McLaughlin C.K., Sleiman H.F. Angewandte Chemie: International Edition 2009, 48:9919-9923.
41. Yang R.H., Jin J.Y., Long L.P., Wang Y.X., Wang H., Tan W.H. Chemical Communications 2009, 45:322-324.
42. Yang S.Y., Wu C., Tan H., Wu Y., Liao S.Z., Wu Z.Y., Shen G.L., Yu R.Q. Analytical Chemistry 2013, 85:14-18.
43. Yoshizumi J., Kumamoto S., Nakamura M., Yamana K. Analyst 2008, 133:323-325.
44. Zinchenko A.A., Baig D., Chen N., Pyshkina O., Endo K., Sergeyev V.G., Yoshikawa K. Biomacromolecules 2008, 9:1981-1987.
45. Zuo X.L., Xiao Y., Plaxco K.W. Journal of the American Chemical Society 2009, 131:6944-6945.