-
1
-
-
33751547539
-
How many drug targets are there?
-
Overington, J.P., Al-Lazikani, B. and Hopkins, A.L. (2006) How many drug targets are there? Nat. Rev. Drug Discov., 5, 993-996.
-
(2006)
Nat. Rev. Drug Discov.
, vol.5
, pp. 993-996
-
-
Overington, J.P.1
Al-Lazikani, B.2
Hopkins, A.L.3
-
2
-
-
54849203800
-
Crystal structures of a second G proteincoupled receptor: Triumphs and implications
-
Parrill, A.L. (2008) Crystal structures of a second G proteincoupled receptor: triumphs and implications. ChemMedChem, 3, 1021-1023.
-
(2008)
ChemMedChem
, vol.3
, pp. 1021-1023
-
-
Parrill, A.L.1
-
3
-
-
77949732088
-
Prediction of the human membrane proteome
-
Fagerberg, L., Jonasson, K., von Heijne, G., Uhlen, M. and Berglund, L. (2010) Prediction of the human membrane proteome. Proteomics, 10, 1141-1149.
-
(2010)
Proteomics
, vol.10
, pp. 1141-1149
-
-
Fagerberg, L.1
Jonasson, K.2
Von Heijne, G.3
Uhlen, M.4
Berglund, L.5
-
4
-
-
78651345652
-
The RCSB Protein Data Bank: Redesigned web site and web services
-
Rose, P.W., Beran, B., Bi, C., Bluhm, W.F., Dimitropoulos, D., Goodsell, D.S., Prlic, A., Quesada, M., Quinn, G.B., Westbrook, J.D. et al. (2011) The RCSB Protein Data Bank: redesigned web site and web services. Nucleic Acids Res., 39, D392-D401.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Rose, P.W.1
Beran, B.2
Bi, C.3
Bluhm, W.F.4
Dimitropoulos, D.5
Goodsell, D.S.6
Prlic, A.7
Quesada, M.8
Quinn, G.B.9
Westbrook, J.D.10
-
5
-
-
10244252813
-
Transmembrane proteins in the Protein Data Bank: Identification and classification
-
Tusnády, G.E., Dosztányi, Z. and Simon, I. (2004) Transmembrane proteins in the Protein Data Bank: identification and classification. Bioinformatics, 20, 2964-2972.
-
(2004)
Bioinformatics
, vol.20
, pp. 2964-2972
-
-
Tusnády, G.E.1
Dosztányi, Z.2
Simon, I.3
-
6
-
-
13444280419
-
PDB-TM: Selection and membrane localization of transmembrane proteins in the protein data bank
-
Tusnády, G.E., Dosztányi, Z. and Simon, I. (2005) PDB-TM: selection and membrane localization of transmembrane proteins in the protein data bank. Nucleic Acids Res., 33, D275-D278.
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Tusnády, G.E.1
Dosztányi, Z.2
Simon, I.3
-
7
-
-
16344362822
-
TMDET: Web server for detecting transmembrane regions of proteins by using their 3D coordinates
-
Tusnády, G.E., Dosztányi, Z. and Simon, I. (2005) TMDET: web server for detecting transmembrane regions of proteins by using their 3D coordinates. Bioinformatics, 21, 1276-1277.
-
(2005)
Bioinformatics
, vol.21
, pp. 1276-1277
-
-
Tusnády, G.E.1
Dosztányi, Z.2
Simon, I.3
-
8
-
-
84861060898
-
OPM database and PPM web server: Resources for positioning of proteins in membranes
-
Lomize, M.A., Pogozheva, I.D., Joo, H., Mosberg, H.I. and Lomize, A.L. (2012) OPM database and PPM web server: resources for positioning of proteins in membranes. Nucleic Acids Res., 40, D370-D376.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Lomize, M.A.1
Pogozheva, I.D.2
Joo, H.3
Mosberg, H.I.4
Lomize, A.L.5
-
9
-
-
33744490360
-
Positioning of proteins in membranes: A computational approach
-
Lomize, A.L., Pogozheva, I.D., Lomize, M.A. and Mosberg, H.I. (2006) Positioning of proteins in membranes: a computational approach. Protein Sci., 15, 1318-1333.
-
(2006)
Protein Sci.
, vol.15
, pp. 1318-1333
-
-
Lomize, A.L.1
Pogozheva, I.D.2
Lomize, M.A.3
Mosberg, H.I.4
-
10
-
-
57049124381
-
CGDB: A database of membrane protein/lipid interactions by coarse-grained molecular dynamics simulations
-
Chetwynd, A.P., Scott, K.A., Mokrab, Y. and Sansom, M.S.P. (2008) CGDB: a database of membrane protein/lipid interactions by coarse-grained molecular dynamics simulations. Mol. Membr. Biol., 25, 662-669.
-
(2008)
Mol. Membr. Biol.
, vol.25
, pp. 662-669
-
-
Chetwynd, A.P.1
Scott, K.A.2
Mokrab, Y.3
Sansom, M.S.P.4
-
11
-
-
78651268103
-
OMPdb: A database of beta-barrel outer membrane proteins from Gram-negative bacteria
-
Tsirigos, K.D., Bagos, P.G. and Hamodrakas, S.J. (2011) OMPdb: a database of beta-barrel outer membrane proteins from Gram-negative bacteria. Nucleic Acids Res., 39, D324-D331.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Tsirigos, K.D.1
Bagos, P.G.2
Hamodrakas, S.J.3
-
12
-
-
30744462792
-
The membrane protein data bank
-
Raman, P., Cherezov, V. and Caffrey, M. (2006) The Membrane Protein Data Bank. Cell. Mol. Life Sci., 63, 36-51.
-
(2006)
Cell. Mol. Life Sci.
, vol.63
, pp. 36-51
-
-
Raman, P.1
Cherezov, V.2
Caffrey, M.3
-
13
-
-
84858077472
-
The Pfam protein families database
-
Punta, M., Coggill, P.C., Eberhardt, R.Y., Mistry, J., Tate, J., Boursnell, C., Pang, N., Forslund, K., Ceric, G., Clements, J. et al. (2012) The Pfam protein families database. Nucleic Acids Res., 40, D290-D301.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Punta, M.1
Coggill, P.C.2
Eberhardt, R.Y.3
Mistry, J.4
Tate, J.5
Boursnell, C.6
Pang, N.7
Forslund, K.8
Ceric, G.9
Clements, J.10
-
14
-
-
58149177176
-
TMFunction: Database for functional residues in membrane proteins
-
Gromiha, M.M., Yabuki, Y., Suresh, M.X., Thangakani, A.M., Suwa, M. and Fukui, K. (2009) TMFunction: database for functional residues in membrane proteins. Nucleic Acids Res., 37, D201-D204.
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Gromiha, M.M.1
Yabuki, Y.2
Suresh, M.X.3
Thangakani, A.M.4
Suwa, M.5
Fukui, K.6
-
15
-
-
58149202169
-
The Transporter Classification Database: Recent advances
-
Saier, M.H., Ming, R.Y., Keith, N., Dorjee, G.T. and Charles, E. (2009) The Transporter Classification Database: recent advances. Nucleic Acids Res., 37, D274-D278.
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Saier, M.H.1
Ming, R.Y.2
Keith, N.3
Dorjee, G.T.4
Charles, E.5
-
16
-
-
33846085447
-
TMBETA-GENOME: Database for annotated beta-barrel membrane proteins in genomic sequences
-
Gromiha, M.M., Yabuki, Y., Kundu, S., Suharnan, S. and Suwa, M. (2007) TMBETA-GENOME: database for annotated beta-barrel membrane proteins in genomic sequences. Nucleic Acids Res., 35, D314-D316.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Gromiha, M.M.1
Yabuki, Y.2
Kundu, S.3
Suharnan, S.4
Suwa, M.5
-
17
-
-
84865176043
-
Membrane protein structural bioinformatics
-
Nugent, T. and Jones, D.T. (2011) Membrane protein structural bioinformatics. J. Struct. Biol., 179, 327-337.
-
(2011)
J. Struct. Biol.
, vol.179
, pp. 327-337
-
-
Nugent, T.1
Jones, D.T.2
-
18
-
-
0032169688
-
PQS: A protein quaternary structure file server
-
Henrick, K. (1998) PQS: a protein quaternary structure file server. Trends Biochem. Sci., 23, 358-361.
-
(1998)
Trends Biochem. Sci.
, vol.23
, pp. 358-361
-
-
Henrick, K.1
-
19
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
Krissinel, E. and Henrick, K. (2007) Inference of macromolecular assemblies from crystalline state. J. Mol. Biol., 372, 774-797.
-
(2007)
J. Mol. Biol.
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
20
-
-
17644392830
-
TM-align: A protein structure alignment algorithm based on the TM-score
-
Zhang, Y. and Skolnick, J. (2005) TM-align: a protein structure alignment algorithm based on the TM-score. Nucleic Acids Res., 33, 2302-2309.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 2302-2309
-
-
Zhang, Y.1
Skolnick, J.2
-
21
-
-
0033028949
-
2+ exchanger
-
2+ exchanger. FEBS Lett., 446, 264-268.
-
(1999)
FEBS Lett.
, vol.446
, pp. 264-268
-
-
Iwamoto, T.1
Nakamura, T.Y.2
Pan, Y.3
Uehara, A.4
Imanaga, I.5
Shigekawa, M.6
-
22
-
-
0035979744
-
A refined structure of human aquaporin-1
-
de Groot, B.L., Engel, A. and Grubmüller, H. (2001) A refined structure of human aquaporin-1. FEBS Lett., 504, 206-211.
-
(2001)
FEBS Lett.
, vol.504
, pp. 206-211
-
-
De Groot, B.L.1
Engel, A.2
Grubmüller, H.3
-
24
-
-
0037122805
-
X-ray structure of a ClC chloride channel at 3.0 Å reveals the molecular basis of anion selectivity
-
Dutzler, R., Campbell, E.B., Cadene, M., Chait, B.T. and MacKinnon, R. (2002) X-ray structure of a ClC chloride channel at 3.0 Å reveals the molecular basis of anion selectivity. Nature, 415, 287-294.
-
(2002)
Nature
, vol.415
, pp. 287-294
-
-
Dutzler, R.1
Campbell, E.B.2
Cadene, M.3
Chait, B.T.4
MacKinnon, R.5
-
25
-
-
4344582448
-
Structural themes in ion channels
-
Doyle, D.A. (2004) Structural themes in ion channels. Eur. Biophys. J., 33, 175-179.
-
(2004)
Eur. Biophys. J.
, vol.33
, pp. 175-179
-
-
Doyle, D.A.1
-
26
-
-
0242405509
-
The structures of BtuCD and MscS and their implications for transporter and channel function
-
Bass, R.B., Locher, K.P., Borths, E., Poon, Y., Strop, P., Lee, A. and Rees, D.C. (2003) The structures of BtuCD and MscS and their implications for transporter and channel function. FEBS Lett., 555, 111-115.
-
(2003)
FEBS Lett.
, vol.555
, pp. 111-115
-
-
Bass, R.B.1
Locher, K.P.2
Borths, E.3
Poon, Y.4
Strop, P.5
Lee, A.6
Rees, D.C.7
-
27
-
-
0035927420
-
Three-dimensional structure of cyanobacterial photosystem I at 2.5 Å resolution
-
Jordan, P., Fromme, P., Witt, H.T., Klukas, O., Saenger, W. and Krauss, N. (2001) Three-dimensional structure of cyanobacterial photosystem I at 2.5 Å resolution. Nature, 411, 909-917.
-
(2001)
Nature
, vol.411
, pp. 909-917
-
-
Jordan, P.1
Fromme, P.2
Witt, H.T.3
Klukas, O.4
Saenger, W.5
Krauss, N.6
-
28
-
-
0034831591
-
A third crystal form of Wolinella succinogenes quinol: Fumarate reductase reveals domain closure at the site of fumarate reduction
-
Lancaster, C.R., Gross, R. and Simon, J. (2001) A third crystal form of Wolinella succinogenes quinol: fumarate reductase reveals domain closure at the site of fumarate reduction. Eur. J. Biochem., 268, 1820-1827.
-
(2001)
Eur. J. Biochem.
, vol.268
, pp. 1820-1827
-
-
Lancaster, C.R.1
Gross, R.2
Simon, J.3
-
29
-
-
0038820376
-
AstexViewer: A visualisation aid for structure-based drug design
-
Hartshorn, M.J. (2002) AstexViewer: a visualisation aid for structure-based drug design. J. Comput. Aided Mol. Des., 16, 871-881.
-
(2002)
J. Comput. Aided Mol. Des.
, vol.16
, pp. 871-881
-
-
Hartshorn, M.J.1
-
30
-
-
84864491623
-
CMWeb: An interactive on-line tool for analysing residue-residue contacts and contact prediction methods
-
Kozma, D., Simon, I. and Tusnády, G.E. (2012) CMWeb: an interactive on-line tool for analysing residue-residue contacts and contact prediction methods. Nucleic Acids Res., 40, W329-W333.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Kozma, D.1
Simon, I.2
Tusnády, G.E.3
|