The mutation rate of mycobacterial repetitive unit loci in strains of M. tuberculosis from cynomolgus macaque infection

BMC Genomics

Volumn 14, Issue 1, 2013, Pages

  Ragheb, Mark N ^a   Ford, Christopher B ^a   Chase, Michael R ^a   Lin, Philana Ling ^b   Flynn, JoAnne L ^c   Fortune, Sarah M ^a,d,e  

^a HARVARD SCHOOL OF PUBLIC HEALTH   (United States)

^b CHILDREN S HOSPITAL OF PITTSBURGH   (United States)

^c UNIVERSITY OF PITTSBURGH SCHOOL OF MEDICINE   (United States)

^d MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^e BROAD INSTITUTE OF MIT AND HARVARD   (United States)

Author keywords

Copy number variation; MIRU; Molecular epidemiology; Mutation rate; Mycobacterial interspersed repetitive units; Mycobacterium tuberculosis; Paired end mapping; Read depth; Whole genome sequencing

Indexed keywords

ANIMAL EXPERIMENT; ANIMAL MODEL; ARTICLE; BACTERIAL STRAIN; COPY NUMBER VARIATION; GENE DELETION; GENE INSERTION; GENE LOCUS; GENE SEQUENCE; GENETIC PROCEDURES; GENETIC VARIABILITY; INTERSPERSED REPEAT; MACACA; MUTATION RATE; MYCOBACTERIAL INTERSPERSED REPETITIVE UNIT; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PAIRED END MAPPING; READ DEPTH; SANGER SEQUENCING; TUBERCULOSIS; WHOLE GENOME SEQUENCING;

ANIMALS; BACTERIAL TYPING TECHNIQUES; DNA COPY NUMBER VARIATIONS; DNA, BACTERIAL; MACACA FASCICULARIS; MINISATELLITE REPEATS; MUTATION RATE; MYCOBACTERIUM TUBERCULOSIS; TUBERCULOSIS;

ANIMALIA; MACACA; MYCOBACTERIUM TUBERCULOSIS;

EID: 84874504575     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-14-145     Document Type: Article

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