메뉴 건너뛰기




Volumn 8, Issue 2, 2013, Pages

Phylogeography and Domestication of Chinese Swamp Buffalo

Author keywords

[No Author keywords available]

Indexed keywords

MITOCHONDRIAL DNA;

EID: 84874243101     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0056552     Document Type: Article
Times cited : (38)

References (59)
  • 1
    • 84874227511 scopus 로고    scopus 로고
    • FAO
    • FAO (2003) www.fao.org/dad.it.
    • (2003)
  • 2
    • 0347032837 scopus 로고    scopus 로고
    • Role of buffalo in the socioeconomic development of rural Asia, current status and future prospectus
    • Nanda AS, Nakao T, (2003) Role of buffalo in the socioeconomic development of rural Asia, current status and future prospectus. Animal Science Journal 74: 443-455.
    • (2003) Animal Science Journal , vol.74 , pp. 443-455
    • Nanda, A.S.1    Nakao, T.2
  • 4
    • 0028448709 scopus 로고
    • Genetic variants of ribosomal DNA and mitochondrial DNA between swamp and river buffaloes
    • Amano T, Miyakoshi Y, Takada T, Kikkawa Y, Suzuki H, (1994) Genetic variants of ribosomal DNA and mitochondrial DNA between swamp and river buffaloes. Animal Genetics 25(Suppl 1): 29-36.
    • (1994) Animal Genetics , vol.25 , pp. 29-36
    • Amano, T.1    Miyakoshi, Y.2    Takada, T.3    Kikkawa, Y.4    Suzuki, H.5
  • 5
    • 0029046984 scopus 로고
    • Nucleotide diversity of mitochondrial DNAs between the swamp and the river types of domestic water buffaloes, Bubalus bubalis, based on restriction endonuclease cleavage patterns
    • Tanaka K, Yamagata T, Masangkay JS, Faruque MO, Vu-Binh D, et al. (1995) Nucleotide diversity of mitochondrial DNAs between the swamp and the river types of domestic water buffaloes, Bubalus bubalis, based on restriction endonuclease cleavage patterns. Biochemical Genetics 33: 137-148.
    • (1995) Biochemical Genetics , vol.33 , pp. 137-148
    • Tanaka, K.1    Yamagata, T.2    Masangkay, J.S.3    Faruque, M.O.4    Vu-Binh, D.5
  • 6
    • 0030430539 scopus 로고    scopus 로고
    • Phylogenetic relationship among all living species of the genus Bubalus based on DNA sequences of the cytochrome b gene
    • Tanaka K, Solis CD, Masangkay JS, Maeda K, Kawamoto Y, et al. (1996) Phylogenetic relationship among all living species of the genus Bubalus based on DNA sequences of the cytochrome b gene. Biochemical Genetics 34: 443-452.
    • (1996) Biochemical Genetics , vol.34 , pp. 443-452
    • Tanaka, K.1    Solis, C.D.2    Masangkay, J.S.3    Maeda, K.4    Kawamoto, Y.5
  • 7
    • 0031128182 scopus 로고    scopus 로고
    • Genetic diversity of Asian water buffalo (Bubalus bubalis), microsatellite variation and a comparison with protein-coding loci
    • Barker JSF, Moore SS, Hetzel DJS, Evans D, Tan SG, et al. (1997) Genetic diversity of Asian water buffalo (Bubalus bubalis), microsatellite variation and a comparison with protein-coding loci. Animal Genetics 28: 103-115.
    • (1997) Animal Genetics , vol.28 , pp. 103-115
    • Barker, J.S.F.1    Moore, S.S.2    Hetzel, D.J.S.3    Evans, D.4    Tan, S.G.5
  • 8
    • 0031079802 scopus 로고    scopus 로고
    • Genetic variation within and relationships among populations of Asian water buffalo (Bubalus bubalis)
    • Barker JSF, Tan SG, Selvaraj OS, Mukherjee TK, (1997) Genetic variation within and relationships among populations of Asian water buffalo (Bubalus bubalis). Animal Genetics 28: 1-13.
    • (1997) Animal Genetics , vol.28 , pp. 1-13
    • Barker, J.S.F.1    Tan, S.G.2    Selvaraj, O.S.3    Mukherjee, T.K.4
  • 9
    • 0036010111 scopus 로고    scopus 로고
    • A set of cattle microsatellite DNA markers for genome analysis of riverine buffalo (Bubalus bubalis)
    • Navani N, Jain PK, Gupta S, Sisodiaand BS, Kumar S, (2002) A set of cattle microsatellite DNA markers for genome analysis of riverine buffalo (Bubalus bubalis). Animal Genetics 33: 149-154.
    • (2002) Animal Genetics , vol.33 , pp. 149-154
    • Navani, N.1    Jain, P.K.2    Gupta, S.3    Sisodiaand, B.S.4    Kumar, S.5
  • 10
    • 0842323950 scopus 로고    scopus 로고
    • Analysis of mitochondrial D-loop region casts new light on domestic water buffalo (Bubalus bubalis) phylogeny
    • Kierstein G, Vallinoto M, Silva A, Schneider MP, Iannuzzi L, et al. (2004) Analysis of mitochondrial D-loop region casts new light on domestic water buffalo (Bubalus bubalis) phylogeny. Molecular Phylogenetics Evolution 30: 308-324.
    • (2004) Molecular Phylogenetics Evolution , vol.30 , pp. 308-324
    • Kierstein, G.1    Vallinoto, M.2    Silva, A.3    Schneider, M.P.4    Iannuzzi, L.5
  • 12
    • 34249801199 scopus 로고    scopus 로고
    • Mitochondrial DNA analyses of Indian water buffalo support a distinct genetic origin of river and swamp buffalo
    • Kumar S, Nagarajan M, Sandhu JS, Kumar N, Behl V, et al. (2007b) Mitochondrial DNA analyses of Indian water buffalo support a distinct genetic origin of river and swamp buffalo. Animal Genetics 38: 227-232.
    • (2007) Animal Genetics , vol.38 , pp. 227-232
    • Kumar, S.1    Nagarajan, M.2    Sandhu, J.S.3    Kumar, N.4    Behl, V.5
  • 13
    • 34047162861 scopus 로고    scopus 로고
    • Two maternal lineages revealed by mtDNA D-loop sequences in Chinese native water buffaloes (Bubalus bubalis)
    • Lei CZ, Zhang W, Chen H, Lu F, Ge QL, et al. (2007a) Two maternal lineages revealed by mtDNA D-loop sequences in Chinese native water buffaloes (Bubalus bubalis). Asian-Australasian Journal of Animal Sciences 20(4): 471-476.
    • (2007) Asian-Australasian Journal of Animal Sciences , vol.20 , Issue.4 , pp. 471-476
    • Lei, C.Z.1    Zhang, W.2    Chen, H.3    Lu, F.4    Ge, Q.L.5
  • 14
    • 34047131733 scopus 로고    scopus 로고
    • Independent maternal origin of Chinese swamp buffalo (Bubalus bubalis)
    • Lei CZ, Zhang W, Chen H, Lu F, Liu RY, (2007b) Independent maternal origin of Chinese swamp buffalo (Bubalus bubalis). Animal Genetics 38: 97-102.
    • (2007) Animal Genetics , vol.38 , pp. 97-102
    • Lei, C.Z.1    Zhang, W.2    Chen, H.3    Lu, F.4    Liu, R.Y.5
  • 15
    • 0032143598 scopus 로고    scopus 로고
    • Genetic diversity of Asian water buffalo (Bubalus bubalis), mitochondrial DNA D-loop and cytochrome b sequence variation
    • Lau CH, Drinkwater RD, Yusoff K, Tan SG, Hetzel DJS, et al. (1998) Genetic diversity of Asian water buffalo (Bubalus bubalis), mitochondrial DNA D-loop and cytochrome b sequence variation. Animal Genetics 29: 253-264.
    • (1998) Animal Genetics , vol.29 , pp. 253-264
    • Lau, C.H.1    Drinkwater, R.D.2    Yusoff, K.3    Tan, S.G.4    Hetzel, D.J.S.5
  • 16
    • 0343567588 scopus 로고
    • New evidence of the origin and domestication of the Chinese swamp buffalo (Bubalus bubalis)
    • Chen YC, Li XH, (1989) New evidence of the origin and domestication of the Chinese swamp buffalo (Bubalus bubalis). Buffalo Journal 1: 51-55.
    • (1989) Buffalo Journal , vol.1 , pp. 51-55
    • Chen, Y.C.1    Li, X.H.2
  • 17
    • 0030821318 scopus 로고    scopus 로고
    • Analysis of genetic diversity of domestic water buffaloes and anoas based on variations in the mitochondrial gene for cytochrome b
    • Kikkawa Y, Yonekawa H, Suzuki H, Amano T, (1997) Analysis of genetic diversity of domestic water buffaloes and anoas based on variations in the mitochondrial gene for cytochrome b. Animal Genetics 28: 195-201.
    • (1997) Animal Genetics , vol.28 , pp. 195-201
    • Kikkawa, Y.1    Yonekawa, H.2    Suzuki, H.3    Amano, T.4
  • 20
    • 79960365094 scopus 로고    scopus 로고
    • Zhongguo jiayang shuiniu de qiyuan (The origins of Chinese domestic buffalo)
    • Liu L, Yang D, Chen X, (2006) Zhongguo jiayang shuiniu de qiyuan (The origins of Chinese domestic buffalo). Kaogu Xuebao 2: 141-178.
    • (2006) Kaogu Xuebao , vol.2 , pp. 141-178
    • Liu, L.1    Yang, D.2    Chen, X.3
  • 21
    • 84874286733 scopus 로고    scopus 로고
    • Shaanxi shuiniu huashi ji Zhongguo huashi shuiniu de dili fenbu he zhongxi fasheng (Fossil Bubalus from Shaanxi, distribution and phylogeny of fossil Bubalus in China)
    • Xue X, Li X, (2000) Shaanxi shuiniu huashi ji Zhongguo huashi shuiniu de dili fenbu he zhongxi fasheng (Fossil Bubalus from Shaanxi, distribution and phylogeny of fossil Bubalus in China). Gujizhui Dongwu Xuebao 38 (3): 218-231.
    • (2000) Gujizhui Dongwu Xuebao 38 , vol.3 , pp. 218-231
    • Xue, X.1    Li, X.2
  • 22
    • 0031470171 scopus 로고    scopus 로고
    • Polymorphism of mitochondrial DNAs of Yunnan domestic water buffaloes, Bubalus bubalis, in China, based on restriction endonuclease cleavage patterns
    • Hu WP, Xu BM, Lian LS, (1997) Polymorphism of mitochondrial DNAs of Yunnan domestic water buffaloes, Bubalus bubalis, in China, based on restriction endonuclease cleavage patterns. Biochemical Genetics 35: 225-231.
    • (1997) Biochemical Genetics , vol.35 , pp. 225-231
    • Hu, W.P.1    Xu, B.M.2    Lian, L.S.3
  • 23
    • 79960349285 scopus 로고    scopus 로고
    • Genetic diversity of mitochondrial cytochrome b gene in Chinese native buffalo
    • Lei CZ, Zhang CM, Song WN, Campana MG, Bower MA, et al. (2011) Genetic diversity of mitochondrial cytochrome b gene in Chinese native buffalo. Animal Genetics 42: 432-436.
    • (2011) Animal Genetics , vol.42 , pp. 432-436
    • Lei, C.Z.1    Zhang, C.M.2    Song, W.N.3    Campana, M.G.4    Bower, M.A.5
  • 24
    • 36749017555 scopus 로고    scopus 로고
    • Genetic diversity and differentiation of Chinese domestic buffalo based on 30 microsatellite markers
    • Zhang Y, Su D, Yu Y, Zhang Y, (2007) Genetic diversity and differentiation of Chinese domestic buffalo based on 30 microsatellite markers. Animal Genetics 38: 569-575.
    • (2007) Animal Genetics , vol.38 , pp. 569-575
    • Zhang, Y.1    Su, D.2    Yu, Y.3    Zhang, Y.4
  • 25
    • 79960378001 scopus 로고    scopus 로고
    • Genetic differentiation of water buffalo (Bubalus bubalis) populations in China, Nepal and south-east Asia, inferences on the region of domestication of the swamp buffalo
    • Zhang Y, Vankan D, Zhang Y, Barker JSF, (2011) Genetic differentiation of water buffalo (Bubalus bubalis) populations in China, Nepal and south-east Asia, inferences on the region of domestication of the swamp buffalo. Animal Genetics 42: 366-377.
    • (2011) Animal Genetics , vol.42 , pp. 366-377
    • Zhang, Y.1    Vankan, D.2    Zhang, Y.3    Barker, J.S.F.4
  • 27
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal-X windows interface, Flexible strategies for multiple sequences alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG, (1997) The Clustal-X windows interface, Flexible strategies for multiple sequences alignment aided by quality analysis tools. Nucleic Acids Research 25: 4876-4882.
    • (1997) Nucleic Acids Research , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 28
    • 77953032930 scopus 로고    scopus 로고
    • Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows
    • Excoffier L, Lischer HEL, (2010) Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows. Molecular Ecology Resources 10: 564-567.
    • (2010) Molecular Ecology Resources , vol.10 , pp. 564-567
    • Excoffier, L.1    Lischer, H.E.L.2
  • 29
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, et al. (2011) MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Molecular Biology and Evolution 28 (10): 2731-2739.
    • (2011) Molecular Biology and Evolution , vol.28 , Issue.10 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5
  • 31
    • 4444299144 scopus 로고    scopus 로고
    • TOPALi: Software for Automatic Identification of Recombinant Sequences within DNA Multiple Alignments
    • Milne I, Wright F, Rowe G, Marshal DF, Husmeier D, et al. (2004) TOPALi: Software for Automatic Identification of Recombinant Sequences within DNA Multiple Alignments. Bioinformatics 20 (11): 1806-1807.
    • (2004) Bioinformatics , vol.20 , Issue.11 , pp. 1806-1807
    • Milne, I.1    Wright, F.2    Rowe, G.3    Marshal, D.F.4    Husmeier, D.5
  • 32
    • 0035953690 scopus 로고    scopus 로고
    • Genetic evidence for Near-Eastern origins of European cattle
    • Troy CS, MacHugh DE, Bailey JF, Magee DA, Loftus RT, et al. (2001) Genetic evidence for Near-Eastern origins of European cattle. Nature 410: 1088-1091.
    • (2001) Nature , vol.410 , pp. 1088-1091
    • Troy, C.S.1    MacHugh, D.E.2    Bailey, J.F.3    Magee, D.A.4    Loftus, R.T.5
  • 36
    • 0036554652 scopus 로고    scopus 로고
    • Reconstruction of biogeographic and evolutionary networks using reticulograms
    • Legendre P, Makarenkov V, (2002) Reconstruction of biogeographic and evolutionary networks using reticulograms. Systematic Biology 51 (2): 199-216.
    • (2002) Systematic Biology , vol.51 , Issue.2 , pp. 199-216
    • Legendre, P.1    Makarenkov, V.2
  • 37
    • 0037173066 scopus 로고    scopus 로고
    • On the evolution of cell
    • Woese C, (2002) On the evolution of cell. PNAS 99 (13): 8742-8747.
    • (2002) PNAS , vol.99 , Issue.13 , pp. 8742-8747
    • Woese, C.1
  • 38
    • 27744472445 scopus 로고    scopus 로고
    • Mitochondrial diversity and phylogeographic structure of Chinese domestic goats
    • Chen SY, Su YH, Wu SF, Sha T, Zhang YP, (2005) Mitochondrial diversity and phylogeographic structure of Chinese domestic goats. Molecular Biology and Evolution 37 (3): 804-814.
    • (2005) Molecular Biology and Evolution , vol.37 , Issue.3 , pp. 804-814
    • Chen, S.Y.1    Su, Y.H.2    Wu, S.F.3    Sha, T.4    Zhang, Y.P.5
  • 39
    • 33847135714 scopus 로고    scopus 로고
    • Genetic diversity and origin of Chinese domestic goats as revealed by complete mtDNA D-loop sequence variation
    • Liu RY, Lei CZ, Liu SH, Yang GS, (2007) Genetic diversity and origin of Chinese domestic goats as revealed by complete mtDNA D-loop sequence variation. Asian-Australasian Journal of Animal Sciences 20 (2): 178-183.
    • (2007) Asian-Australasian Journal of Animal Sciences , vol.20 , Issue.2 , pp. 178-183
    • Liu, R.Y.1    Lei, C.Z.2    Liu, S.H.3    Yang, G.S.4
  • 40
    • 0035826870 scopus 로고    scopus 로고
    • Multiple maternal origins and weak phylogeographic structure in domestic goats
    • Luikart G, Gielly L, Excoffier L, Vigne JD, Bouvet J, et al. (2001) Multiple maternal origins and weak phylogeographic structure in domestic goats. PNAS 98 (10): 5927-5932.
    • (2001) PNAS , vol.98 , Issue.10 , pp. 5927-5932
    • Luikart, G.1    Gielly, L.2    Excoffier, L.3    Vigne, J.D.4    Bouvet, J.5
  • 41
    • 33748112920 scopus 로고    scopus 로고
    • Origin, genetic diversity, and population structure of Chinese domestic sheep
    • Chen SY, Duan ZY, Sha T, Xiangyu J, Wu SF, et al. (2006) Origin, genetic diversity, and population structure of Chinese domestic sheep. Gene 376 (2): 216-223.
    • (2006) Gene , vol.376 , Issue.2 , pp. 216-223
    • Chen, S.Y.1    Duan, Z.Y.2    Sha, T.3    Xiangyu, J.4    Wu, S.F.5
  • 45
    • 0030471287 scopus 로고    scopus 로고
    • The taxonomy of the Asian wild buffalo from the Asian mainland
    • Groves CP, (1996) The taxonomy of the Asian wild buffalo from the Asian mainland. International Journal of Mammalian Biology 61: 327-338.
    • (1996) International Journal of Mammalian Biology , vol.61 , pp. 327-338
    • Groves, C.P.1
  • 47
    • 34748824162 scopus 로고    scopus 로고
    • New evidence for Southeast Asian Pleistocene foraging economies, Faunal remains from the early levels of Lang Rongrien rockshelter, Krabi, Thailand
    • Mudar K, Anderson D, (2007) New evidence for Southeast Asian Pleistocene foraging economies, Faunal remains from the early levels of Lang Rongrien rockshelter, Krabi, Thailand. Asian Perspectives 46: 298-334.
    • (2007) Asian Perspectives , vol.46 , pp. 298-334
    • Mudar, K.1    Anderson, D.2
  • 48
    • 33845503005 scopus 로고    scopus 로고
    • The exploitation of wild and domestic water buffalo in prehistoric northwestern South Asia
    • In Buitenhuis H, Barto Siewicz L, Choyke AM, Editors
    • Patel A, Meadow R, (1998) The exploitation of wild and domestic water buffalo in prehistoric northwestern South Asia. In Buitenhuis H, Barto siewicz L, Choyke AM, editors, Archaeozoology of the Near East III, Groningen, ARC- Publicaties 18: 180-198.
    • (1998) Archaeozoology of the Near East III, Groningen, ARC - Publicaties , vol.18 , pp. 180-198
    • Patel, A.1    Meadow, R.2
  • 49
    • 33746895905 scopus 로고    scopus 로고
    • The pastoral economy of Dholavira, a first look at animals and urban life in third millennium Kutch
    • In Allchin R and Allchin B, editors, South Asian Archaeology 1995 New Delhi, Science Publishers
    • Patel A (1997) The pastoral economy of Dholavira, a first look at animals and urban life in third millennium Kutch. In Allchin R and Allchin B, editors, South Asian Archaeology 1995, Porceedings of the 13th Conference of the European Association of South Asian Archaeologists, New Delhi, Science Publishers: 101-113.
    • (1997) Porceedings of the 13th Conference of the European Association of South Asian Archaeologists , pp. 101-113
    • Patel, A.1
  • 52
    • 33750573523 scopus 로고    scopus 로고
    • Archaeology and archaeozoology of Phum Snay, A late prehistoric cemetery in northwestern Cambodia
    • O'Reilly DJW, Driesch AVD, Voeun V, (2006) Archaeology and archaeozoology of Phum Snay, A late prehistoric cemetery in northwestern Cambodia. Asian Perspectives 45: 188-211.
    • (2006) Asian Perspectives , vol.45 , pp. 188-211
    • O'Reilly, D.J.W.1    Driesch, A.V.D.2    Voeun, V.3
  • 53
    • 79960371516 scopus 로고
    • Yunnan Baoshan Pupiao quanxinshi zaoqi wenhua yiwu ji buru dongwu de yicun (Cultural and animal remains from Pupiao, Yunnan)
    • Zong G, Huang XS, (1985) Yunnan Baoshan Pupiao quanxinshi zaoqi wenhua yiwu ji buru dongwu de yicun (Cultural and animal remains from Pupiao, Yunnan). Shiqian Yanjiu 4: 46-50.
    • (1985) Shiqian Yanjiu , vol.4 , pp. 46-50
    • Zong, G.1    Huang, X.S.2
  • 54
    • 83555179268 scopus 로고
    • Yunnan sheng Jianchuan Haimenkou qingtong shidai zaoqi yizhi (Early Bronze Age site at Haimenkou in Jianchuan, Yunnan province)
    • Yunnan Museum, (1995) Yunnan sheng Jianchuan Haimenkou qingtong shidai zaoqi yizhi (Early Bronze Age site at Haimenkou in Jianchuan, Yunnan province). Kaogu 9: 775-787.
    • (1995) Kaogu , vol.9 , pp. 775-787
    • Yunnan, M.1
  • 55
    • 77952322509 scopus 로고    scopus 로고
    • Yunnan Jianchuanxian Haimenkou yizhi chutu tongqi de jishu fenxi jiqi niandai
    • Li X, Han R, (2006) Yunnan Jianchuanxian Haimenkou yizhi chutu tongqi de jishu fenxi jiqi niandai. Kaogu 7: 80-85.
    • (2006) Kaogu , vol.7 , pp. 80-85
    • Li, X.1    Han, R.2
  • 56
    • 84874239717 scopus 로고    scopus 로고
    • (Decoding the Wa Mountains). Kunming, Yunnan Meishu Press
    • Zhu FY, Li L, Jun L (2005) Jiemi Washan (Decoding the Wa Mountains). Kunming, Yunnan Meishu Press.
    • (2005) Jiemi Washan
    • Zhu, F.Y.1    Li, L.2    Jun, L.3
  • 57
    • 10044275006 scopus 로고
    • An interpretation of agricultural rites in Southeast Asia, with a demonstration of use of data from both continental and insular areas
    • De Jong, De Josselin PE, (1965) An interpretation of agricultural rites in Southeast Asia, with a demonstration of use of data from both continental and insular areas. The Journal of Asian Studies 24 (2): 283-291.
    • (1965) The Journal of Asian Studies , vol.24 , Issue.2 , pp. 283-291
    • De Jong1    De Josselin, P.E.2
  • 58
    • 84874250125 scopus 로고
    • Shitan gudai Sichuan yu Dongnanya wenming de huanxi (Relitionship between Sichuan and Southeastern Asia in ancient times)
    • Tong E, (1983) Shitan gudai Sichuan yu Dongnanya wenming de huanxi (Relitionship between Sichuan and Southeastern Asia in ancient times). Wenwu 9: 73-81.
    • (1983) Wenwu , vol.9 , pp. 73-81
    • Tong, E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.