메뉴 건너뛰기




Volumn 12, Issue 1, 2013, Pages 151-161

Qualitative and quantitative expression status of the human chromosome 20 genes in cancer tissues and the representative cell lines

(43)  Wang, Quanhui a,b,c   Wen, Bo b,c   Yan, Guangrong c,d   Wei, Junying c,e,f   Xie, Liqi c,e   Xu, Shaohang b   Jiang, Dahai b   Wang, Tingyou b   Lin, Liang b   Zi, Jin b   Zhang, Ju a   Zhou, Ruo b   Zhao, Haiyi b   Ren, Zhe b   Qu, Nengrong b   Lou, Xiaomin a   Sun, Haidan a   Du, Chaoqin b   Chen, Chuangbin b   Zhang, Shenyan a   more..


Author keywords

C HPP; Chromosome; Chromosome features; Proteome; Quantitative correlations

Indexed keywords

MESSENGER RNA; MICRORNA; PROTEOME;

EID: 84874026295     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr3008336     Document Type: Article
Times cited : (18)

References (48)
  • 5
    • 26944467118 scopus 로고    scopus 로고
    • Deletion at chromosome band 20p12.1 in colorectal cancer revealed by high resolution array comparative genomic hybridization
    • Davison, E. J.; Tarpey, P. S.; Fiegler, H.; Tomlinson, I. P.; Carter, N. P. Deletion at chromosome band 20p12.1 in colorectal cancer revealed by high resolution array comparative genomic hybridization. Genes Chromosomes Cancer 2005, 44 (4), 384-91.
    • (2005) Genes Chromosomes Cancer , vol.44 , Issue.4 , pp. 384-391
    • Davison, E.J.1    Tarpey, P.S.2    Fiegler, H.3    Tomlinson, I.P.4    Carter, N.P.5
  • 7
    • 33745700257 scopus 로고    scopus 로고
    • Pancreatic adenocarcinoma-genetic portrait from chromosomes to microarrays
    • Karhu, R.; Mahlamaki, E.; Kallioniemi, A. Pancreatic adenocarcinoma- genetic portrait from chromosomes to microarrays. Genes Chromosomes Cancer 2006, 45 (8), 721-30.
    • (2006) Genes Chromosomes Cancer , vol.45 , Issue.8 , pp. 721-730
    • Karhu, R.1    Mahlamaki, E.2    Kallioniemi, A.3
  • 10
    • 0037249834 scopus 로고    scopus 로고
    • CSE1L/CAS: Its role in proliferation and apoptosis
    • Behrens, P.; Brinkmann, U.; Wellmann, A. CSE1L/CAS: its role in proliferation and apoptosis. Apoptosis 2003, 8 (1), 39-44.
    • (2003) Apoptosis , vol.8 , Issue.1 , pp. 39-44
    • Behrens, P.1    Brinkmann, U.2    Wellmann, A.3
  • 11
    • 0035347312 scopus 로고    scopus 로고
    • High expression of the proliferation and apoptosis associated CSE1L/CAS gene in hepatitis and liver neoplasms: Correlation with tumor progression
    • Wellmann, A.; Flemming, P.; Behrens, P.; Wuppermann, K.; Lang, H.; Oldhafer, K.; Pastan, I.; Brinkmann, U. High expression of the proliferation and apoptosis associated CSE1L/CAS gene in hepatitis and liver neoplasms: correlation with tumor progression. Int. J. Mol. Med. 2001, 7 (5), 489-94.
    • (2001) Int. J. Mol. Med. , vol.7 , Issue.5 , pp. 489-494
    • Wellmann, A.1    Flemming, P.2    Behrens, P.3    Wuppermann, K.4    Lang, H.5    Oldhafer, K.6    Pastan, I.7    Brinkmann, U.8
  • 15
    • 84857938446 scopus 로고    scopus 로고
    • Comparative proteomic analysis of eleven common cell lines reveals ubiquitous but varying expression of most proteins
    • Geiger, T.; Wehner, A.; Schaab, C.; Cox, J.; Mann, M. Comparative proteomic analysis of eleven common cell lines reveals ubiquitous but varying expression of most proteins. Mol. Cell. Proteomics 2012, 11 (3), M111 014050.
    • (2012) Mol. Cell. Proteomics , vol.11 , Issue.3
    • Geiger, T.1    Wehner, A.2    Schaab, C.3    Cox, J.4    Mann, M.5
  • 18
    • 84862902689 scopus 로고    scopus 로고
    • PepDistiller: A quality control tool to improve the sensitivity and accuracy of peptide identifications in shotgun proteomics
    • Li, N.; Wu, S.; Zhang, C.; Chang, C.; Zhang, J.; Ma, J.; Li, L.; Qian, X.; Xu, P.; Zhu, Y.; He, F. PepDistiller: A quality control tool to improve the sensitivity and accuracy of peptide identifications in shotgun proteomics. Proteomics 2012, 12 (11), 1720-5.
    • (2012) Proteomics , vol.12 , Issue.11 , pp. 1720-1725
    • Li, N.1    Wu, S.2    Zhang, C.3    Chang, C.4    Zhang, J.5    Ma, J.6    Li, L.7    Qian, X.8    Xu, P.9    Zhu, Y.10    He, F.11
  • 19
    • 33847630405 scopus 로고    scopus 로고
    • Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry
    • Elias, J. E.; Gygi, S. P. Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry. Nat. Methods 2007, 4 (3), 207-14.
    • (2007) Nat. Methods , vol.4 , Issue.3 , pp. 207-214
    • Elias, J.E.1    Gygi, S.P.2
  • 21
    • 74049132731 scopus 로고    scopus 로고
    • Label-free, normalized quantification of complex mass spectrometry data for proteomic analysis
    • Griffin, N. M.; Yu, J.; Long, F.; Oh, P.; Shore, S.; Li, Y.; Koziol, J. A.; Schnitzer, J. E. Label-free, normalized quantification of complex mass spectrometry data for proteomic analysis. Nat. Biotechnol. 2010, 28 (1), 83-9.
    • (2010) Nat. Biotechnol. , vol.28 , Issue.1 , pp. 83-89
    • Griffin, N.M.1    Yu, J.2    Long, F.3    Oh, P.4    Shore, S.5    Li, Y.6    Koziol, J.A.7    Schnitzer, J.E.8
  • 23
    • 84863922124 scopus 로고    scopus 로고
    • Comprehensive molecular characterization of human colon and rectal cancer
    • The Cancer Genome Atlas Network.
    • The Cancer Genome Atlas Network. Comprehensive molecular characterization of human colon and rectal cancer. Nature 2012, 487 (7407), 330-7.
    • (2012) Nature , vol.487 , Issue.7407 , pp. 330-337
  • 24
    • 80054771709 scopus 로고    scopus 로고
    • RNA-Seq analyses generate comprehensive transcriptomic landscape and reveal complex transcript patterns in hepatocellular carcinoma
    • Huang, Q.; Lin, B.; Liu, H.; Ma, X.; Mo, F.; Yu, W.; Li, L.; Li, H.; Tian, T.; Wu, D.; Shen, F.; Xing, J.; Chen, Z. N. RNA-Seq analyses generate comprehensive transcriptomic landscape and reveal complex transcript patterns in hepatocellular carcinoma. PLoS One 2011, 6 (10), e26168.
    • (2011) PLoS One , vol.6 , Issue.10
    • Huang, Q.1    Lin, B.2    Liu, H.3    Ma, X.4    Mo, F.5    Yu, W.6    Li, L.7    Li, H.8    Tian, T.9    Wu, D.10    Shen, F.11    Xing, J.12    Chen, Z.N.13
  • 25
  • 26
    • 84859326067 scopus 로고    scopus 로고
    • Functions for robust correlations and hierarchical clustering
    • Langfelder, P.; Horvath, S.; Fast, R. Functions for robust correlations and hierarchical clustering. J. Stat. Software 2012, 46, 11.
    • (2012) J. Stat. Software , vol.46 , pp. 11
    • Langfelder, P.1    Horvath, S.2    Fast, R.3
  • 28
    • 78651293534 scopus 로고    scopus 로고
    • MiRBase: Integrating microRNA annotation and deep-sequencing data
    • Kozomara, A.; Griffiths-Jones, S. miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res. 2011, 39 (Database issue), D152-7.
    • (2011) Nucleic Acids Res. , vol.39
    • Kozomara, A.1    Griffiths-Jones, S.2
  • 29
    • 34249848751 scopus 로고    scopus 로고
    • CEGMA: A pipeline to accurately annotate core genes in eukaryotic genomes
    • Parra, G.; Bradnam, K.; Korf, I. CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes. Bioinformatics 2007, 23 (9), 1061-7.
    • (2007) Bioinformatics , vol.23 , Issue.9 , pp. 1061-1067
    • Parra, G.1    Bradnam, K.2    Korf, I.3
  • 33
    • 33646900714 scopus 로고    scopus 로고
    • DNA copy number aberrations in intestinal-type gastric cancer revealed by array-based comparative genomic hybridization
    • Vauhkonen, H.; Vauhkonen, M.; Sajantila, A.; Sipponen, P.; Knuutila, S. DNA copy number aberrations in intestinal-type gastric cancer revealed by array-based comparative genomic hybridization. Cancer Genet. Cytogenet. 2006, 167 (2), 150-4.
    • (2006) Cancer Genet. Cytogenet. , vol.167 , Issue.2 , pp. 150-154
    • Vauhkonen, H.1    Vauhkonen, M.2    Sajantila, A.3    Sipponen, P.4    Knuutila, S.5
  • 35
    • 84887212487 scopus 로고    scopus 로고
    • A histone map of human chromosome 20q13.12
    • Akan, P.; Sahlen, M.; Deloukas, P. A histone map of human chromosome 20q13.12. PLoS One 2009, 4 (2), e4479.
    • (2009) PLoS One , vol.4 , Issue.2
    • Akan, P.1    Sahlen, M.2    Deloukas, P.3
  • 37
    • 77957555896 scopus 로고    scopus 로고
    • The paradox of 20q11.21 amplification in a subset of cases of myeloid malignancy with chromosome 20 deletion
    • Mackinnon, R. N.; Selan, C.; Wall, M.; Baker, E.; Nandurkar, H.; Campbell, L. J. The paradox of 20q11.21 amplification in a subset of cases of myeloid malignancy with chromosome 20 deletion. Genes Chromosomes Cancer 2010, 49 (11), 998-1013.
    • (2010) Genes Chromosomes Cancer , vol.49 , Issue.11 , pp. 998-1013
    • MacKinnon, R.N.1    Selan, C.2    Wall, M.3    Baker, E.4    Nandurkar, H.5    Campbell, L.J.6
  • 39
    • 84874046253 scopus 로고    scopus 로고
    • Comparative simulation studies of native and single-site mutant human beta-defensin-1 peptides
    • Toubar, R. A.; Zhmurov, A.; Barsegov, V.; Marx, K. A. Comparative simulation studies of native and single-site mutant human beta-defensin-1 peptides. J. Biomol. Struct. Dyn. 2012.
    • (2012) J. Biomol. Struct. Dyn.
    • Toubar, R.A.1    Zhmurov, A.2    Barsegov, V.3    Marx, K.A.4
  • 42
    • 84860468134 scopus 로고    scopus 로고
    • Fine mapping analysis of a region of 20q13.33 identified five independent susceptibility loci for glioma in a Chinese Han population
    • Song, X.; Zhou, K.; Zhao, Y.; Huai, C.; Yu, H.; Chen, Y.; Chen, G.; Chen, H.; Fan, W.; Mao, Y.; Lu, D. Fine mapping analysis of a region of 20q13.33 identified five independent susceptibility loci for glioma in a Chinese Han population. Carcinogenesis 2012, 33 (5), 1065-71.
    • (2012) Carcinogenesis , vol.33 , Issue.5 , pp. 1065-1071
    • Song, X.1    Zhou, K.2    Zhao, Y.3    Huai, C.4    Yu, H.5    Chen, Y.6    Chen, G.7    Chen, H.8    Fan, W.9    Mao, Y.10    Lu, D.11
  • 43
    • 84865662406 scopus 로고    scopus 로고
    • Downregulation of NF-kappaB and PCNA in the regulatory pathways of apoptosis by cyclooxygenase-2 inhibitors in experimental lung cancer
    • Setia, S.; Sanyal, S. N. Downregulation of NF-kappaB and PCNA in the regulatory pathways of apoptosis by cyclooxygenase-2 inhibitors in experimental lung cancer. Mol. Cell. Biochem. 2012, 369 (1-2), 75-86.
    • (2012) Mol. Cell. Biochem. , vol.369 , Issue.1-2 , pp. 75-86
    • Setia, S.1    Sanyal, S.N.2
  • 44
    • 84855415190 scopus 로고    scopus 로고
    • Interaction of proliferation cell nuclear antigen (PCNA) with c-Abl in cell proliferation and response to DNA damages in breast cancer
    • Zhao, H.; Ho, P. C.; Lo, Y. H.; Espejo, A.; Bedford, M. T.; Hung, M. C.; Wang, S. C. Interaction of proliferation cell nuclear antigen (PCNA) with c-Abl in cell proliferation and response to DNA damages in breast cancer. PLoS One 2012, 7 (1), e29416.
    • (2012) PLoS One , vol.7 , Issue.1
    • Zhao, H.1    Ho, P.C.2    Lo, Y.H.3    Espejo, A.4    Bedford, M.T.5    Hung, M.C.6    Wang, S.C.7
  • 45
    • 42549132465 scopus 로고    scopus 로고
    • POLR2F, ATP6V0A1 and PRNP expression in colorectal cancer: New molecules with prognostic significance?
    • Antonacopoulou, A. G.; Grivas, P. D.; Skarlas, L.; Kalofonos, M.; Scopa, C. D.; Kalofonos, H. P. POLR2F, ATP6V0A1 and PRNP expression in colorectal cancer: new molecules with prognostic significance? Anticancer Res. 2008, 28 (2B), 1221-7.
    • (2008) Anticancer Res. , vol.28 , Issue.2 B , pp. 1221-1227
    • Antonacopoulou, A.G.1    Grivas, P.D.2    Skarlas, L.3    Kalofonos, M.4    Scopa, C.D.5    Kalofonos, H.P.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.