Effects of sulfate reduction on the bacterial community and kinetic parameters of a dechlorinating culture under chemostat growth conditions

Environmental Science and Technology

Volumn 47, Issue 4, 2013, Pages 1879-1886

  Berggren, Dusty R V ^a,c   Marshall, Ian P G ^b,d   Azizian, Mohammad F ^a   Spormann, Alfred M ^b   Semprini, Lewis ^a  

^a OREGON STATE UNIVERSITY   (United States)

^b Stanford University   (United States)

^c CH2M HILL   (United States)

^d AARHUS UNIVERSITY   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL COMMUNITY; BATCH KINETIC TESTS; CLONE LIBRARY; DEHALOCOCCOIDES; GROWTH CONDITIONS; LONG TERM EXPOSURE; PSEUDO STEADY STATE; REDUCTIVE DEHALOGENATION; SULFATE REDUCTION; X-VALUES;

CLONE CELLS; DECHLORINATION; ETHYLENE; SULFUR COMPOUNDS;

CHEMOSTATS;

SULFATE; VINYL CHLORIDE;

BACTERIUM; CHEMOSTAT; DECHLORINATION; GROWTH RESPONSE; MICROBIAL COMMUNITY; SULFATE; SULFIDE; TRANSFORMATION;

ARTICLE; BACTERIAL GROWTH; CHEMOSTAT; DECHLORINATION; DEHALOCOCCOIDES; DEHALOCOCCOIDES MCCARTYI; DEHALOGENATION; LIMIT OF DETECTION; LONG TERM EXPOSURE; METHANOGENESIS; MICROBIAL COMMUNITY; NONHUMAN; PHYLOGENETIC TREE;

BACTERIA; BIODEGRADATION, ENVIRONMENTAL; MICROBIAL CONSORTIA; MODELS, CHEMICAL; SULFATES; TETRACHLOROETHYLENE;

EID: 84874023302     PISSN: 0013936X     EISSN: 15205851     Source Type: Journal    
DOI: 10.1021/es304244z     Document Type: Article

References (40)

1. Löffler, F. E.; Edwards, E. A. Harnessing microbial activities for environmental cleanup Curr.t Opin. Biotechnol. 2006, 17 (3) 274-284 (Pubitemid 43850258)
2. CERCLA 2007, Priority List Support Document. http://www.atsdr.cdc.gov/ cercla/supportdocs/appendix-a.pdf (accessed May 16, 2012).
3. Löffler, F. E.; Yan, J.; Ritalahti, K. M.; Adrian, L.; Edwards, E. A.; Konstantinidis, K. T.; Müller, J. A.; Fullerton, H.; Zinder, S. H.; Spormann, A. M. Dehalococcoides mccartyi gen. nov., sp. nov., obligate organohalide-respiring anaerobic bacteria, relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidetes classis nov., within the phylum Chloroflexi Int. J. Syst. Evol. Microbiol. 2012, 10.1099/ijs.0.034926-0
4. MaymoGatell, X.; Chien, Y. T.; Gossett, J. M.; Zinder, S. H. Isolation of a bacterium that reductively dechlorinates tetrachloroethene to ethene Science 1997, 276 (5318) 1568-1571 (Pubitemid 27255322)
5. He, J. Z.; Ritalahti, K. M.; Yang, K. L.; Koenigsberg, S. S.; Löffler, F. E. Detoxification of vinyl chloride to ethene coupled to growth of an anaerobic bacterium Nature 2003, 424 (6944) 62-65 (Pubitemid 36834840)
6. Hendrickson, E. R.; Payne, J. A.; Young, R. M.; Starr, M. G.; Perry, M. P.; Fahnestock, S.; Ellis, D. E.; Ebersole, R. C. Molecular analysis of Dehalococcoides 16S ribosomal DNA from chloroethene-contaminated sites throughout North America and Europe Appl. Environ. Microbiol. 2002, 68 (2) 485-495 (Pubitemid 34113032)
7. Cupples, A. M.; Spormann, A. M.; McCarty, P. L. Vinyl chloride and cis-dichloroethene dechlorination kinetics and microorganism growth under substrate limiting conditions Environ. Sci. Technol. 2004, 38 (4) 1102-1107 (Pubitemid 38228725)
8. Gerritse, J.; Drzyzga, O.; Kloetstra, G.; Keijmel, M.; Wiersum, L. P.; Hutson, R.; Collins, M. D.; Gottschal, J. C. Influence of different electron donors and acceptors on dehalorespiration of tetrachloroethene by Desulfitobacterium frappieri TCE1 Appl. Environ. Microbiol. 1999, 65 (12) 5212-5221 (Pubitemid 129520600)
9. Aulenta, F.; Pera, A.; Rossetti, S.; Papini, M. P.; Majone, M. Relevance of side reactions in anaerobic reductive dechlorination microcosms amended with different electron donors Water Res. 2007, 41 (1) 27-38 (Pubitemid 44828109)
10. Boopathy, R.; Peters, R. Enhanced biotransformation of trichloroethylene under mixed electron acceptor conditions Curr. Microbiol. 2001, 42 (2) 134-138 (Pubitemid 32234648)
11. Drzyzga, O.; Gerritse, J.; Dijk, J. A.; Elissen, H.; Gottschal, J. C. Coexistence of a sulphate-reducing Desulfovibrio species and the dehalorespiring Desulfitobacterium frappieri TCE1 in defined chemostat cultures grown with various combinations of sulphate and tetrachloroethene Environ. Microbiol. 2001, 3 (2) 92-99 (Pubitemid 33136746)
12. Hoelen, T. P.; Reinhard, M. Complete biological dehalogenation of chlorinated ethylenes in sulfate containing groundwater Biodegradation 2004, 15 (6) 395-403
13. Heimann, A. C.; Friis, A. K.; Jakobsen, R. Effects of sulfate on anaerobic chloroethene degradation by an enriched culture under transient and steady-state hydrogen supply Water Res. 2005, 39 (15) 3579-3586
14. Keeling, M. T. Bench-scale study for the bioremediation of chlorinated ethylenes at Point Mugu Naval Air Weapons Station, Point Mugu California, IRP Site 24. Master of Science Thesis, Oregon State University, Corvallis, 1998.
15. Fennell, D. E.; Gossett, J. M.; Zinder, S. H. Comparison of butyric kid, ethanol, lactic acid, and propionic acid as hydrogen donors for the reductive dechlorination of tetrachloroethene Environ. Sci. Technol. 1997, 31 (3) 918-926 (Pubitemid 27106003)
16. Aulenta, F.; Majone, M.; Tandoi, V. Enhanced anaerobic bioremediation of chlorinated solvents: Environmental factors influencing microbial activity and their relevance under field conditions J. Chem. Technol. Biotechnol. 2006, 81 (9) 1463-1474 (Pubitemid 44256084)
17. 2 between sulfate reduction and dechlorination in butyrate-fed anaerobic cultures Process Biochem. 2008, 43 (2) 161-168
18. Löffler, F. E.; Tiedje, J. M.; Sanford, R. A. Fraction of electrons consumed in electron acceptor reduction and hydrogen thresholds as indicators of halorespiratory physiology Appl. Environ. Microbiol. 1999, 65 (9) 4049-4056
19. Yang, Y. R.; McCarty, P. L. Competition for hydrogen within a chlorinated solvent dehalogenating anaerobic mixed culture Environ. Sci. Technol. 1998, 32 (22) 3591-3597 (Pubitemid 28527754)
20. Lu, X.-X.; Tao, S.; Bosma, T.; Gerritse, J. Characteristic hydrogen concentrations for various redox processes in batch study J. Environ. Sci. Health, Part A 2001, 36 (9) 1725-1734 (Pubitemid 33021252)
21. Mazur, C. S.; Jones, W. J. Hydrogen concentrations in sulfate-reducing estuarine sediments during PCE dehalogenation Environ. Sci. Technol. 2001, 35 (24) 4783-4788 (Pubitemid 33144341)
22. Sleep, B. E.; Seepersad, D. J.; Mo, K.; Heidorn, C. M.; Hrapovic, L.; Morrill, P. L.; McMaster, M. L.; Hood, E. D.; LeBron, C.; Sherwood Lollar, B.; Major, D. W.; Edwards, E. A. Biological enhancement of tetrachloroethene dissolution and associated microbial community changes Environ. Sci. Technol. 2006, 40 (11) 3623-3633 (Pubitemid 43830971)
23. Azizian, M. F.; Behrens, S.; Sabalowsky, A.; Dolan, M. E.; Spormann, A. M.; Semprini, L. Continuous-flow column study of reductive dehalogenation of PCE upon bioaugmentation with the Evanite enrichment culture J. Contam. Hydrol. 2008, 100 (1-2) 11-21
24. Azizian, M. F.; Marshall, I. P. G.; Behrens, S.; Spormann, A. M.; Semprini, L. Comparison of lactate, formate, and propionate as hydrogen donors for the reductive dehalogenation of trichloroethene in a continuous-flow column J. Contam. Hydrol. 2010, 113 (1-4) 77-92
25. Yu, S. H.; Dolan, M. E.; Semprini, L. Kinetics and inhibition of reductive dechlorination of chlorinated ethylenes by two different mixed cultures Environ. Sci. Technol. 2005, 39 (1) 195-205
26. Fennell, D. E.; Gossett, J. M. Modeling the production of and competition for hydrogen in a dechlorinating culture Environ. Sci. Technol. 1998, 32 (16) 2450-2460 (Pubitemid 28374637)
27. Pang, I. J. Microcosm study of enhanced biotransformation vinyl chloride to ethylene with TCE additions under various anaerobic conditions from Point Mugu, California; Master of Science Thesis, Oregon State University: Corvallis, 2000.
28. 2-D, 20 th ed.; American Public Health Association, 1999.
29. Gornall, A. G.; Bardawill, C. J.; David, M. M. Determination of serum proteins by means of the biuret reaction J. Biol. Chem. 1949, 177 (2) 751-766
30. Berggren, D. R. V. Kinetic and molecular effects of sulfate reduction on a dechlorinating culture under chemostat growth conditions. Master of Science Thesis, Oregon State University, Corvallis, OR, 2011.
31. Marshall, I. P. G.; Berggren, D. R. V.; Azizian, M. F.; Burow, L. C.; Semprini, L.; Spormann, A. M. The hydrogenase chip: A tiling oligonucleotide DNA microarray technique for characterizing hydrogen-producing and -consuming microbes in microbial communities ISME J. 2012, 6 (4) 814-826
32. McMurdie, P. J.; Behrens, S. F.; Müller, J. A.; Goke, J.; Ritalahti, K. M.; Wagner, R.; Goltsman, E.; Lapidus, A.; Holmes, S.; Löffler, F. E.; Spormann, A. M., Localized plasticity in the streamlined genomes of vinyl chloride respiring dehalococcoides. PLoS Genet. 2009, 5, (11).
33. Li, W. Z.; Godzik, A. Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences Bioinformatics 2006, 22 (13) 1658-1659 (Pubitemid 43985301)
34. Edgar, R. C. MUSCLE: Multiple sequence alignment with high accuracy and high throughput Nucleic Acids Res. 2004, 32 (5) 1792-1797 (Pubitemid 38832724)
35. Guindon, S.; Gascuel, O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood Syst. Biol. 2003, 52 (5) 696-704 (Pubitemid 37365050)
36. Muyzer, G.; Stams, A. J. M. The ecology and biotechnology of sulphate-reducing bacteria Nat. Rev. Microbiol. 2008, 6 (6) 441-454 (Pubitemid 351696438)
37. Townsend, G. T.; Suflita, J. M. Influence of sulfur oxyanions on reductive dehalogenation activities in Desulfomonile tiedjei Appl. Environ. Microbiol. 1997, 63 (9) 3594-3599 (Pubitemid 27383158)
38. Chen, Y.; Cheng, J. J.; Creamer, K. S. Inhibition of anaerobic digestion process: A review Bioresour. Technol. 2008, 99 (10) 4044-4064 (Pubitemid 351380787)
39. He, J.; Sung, Y.; Krajmalnik-Brown, R.; Ritalahti, K. M.; Löffler, F. E. Isolation and characterization of Dehalococcoides sp strain FL2, a trichloroethene (TCE)- and 1,2-dichloroethene-respiring anaerobe Environ. Microbiol. 2005, 7 (9) 1442-1450 (Pubitemid 41204937)
40. Granade, S.; Leigh, D. P.; Johnson, C. D. Chlorinated solvent bioremediation: 3 case studies. In Seventh International In Situ and On-Site Bioremediation Symposium,; Magar, V. S.; Kelley, M. E., Eds.; Battelle Press: Orlando, FL, June, 2003; Paper A-13.