Molecular analysis of Dehalococcoides 16S ribosomal DNA from chloroethene-contaminated sites throughout North America and Europe

Applied and Environmental Microbiology

Volumn 68, Issue 2, 2002, Pages 485-495

  Hendrickson, Edwin R ^a   Payne, Jo Ann ^a   Young, Roslyn M ^a   Starr, Mark G ^a   Perry, Michael P ^a   Fahnestock, Stephen ^a   Ellis, David E ^a   Ebersole, Richard C ^a  

^a DUPONT COMPANY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOASSAY; BIOREMEDIATION; CHLORINE COMPOUNDS; DECHLORINATION;

CLIMATIC ZONES;

DNA SEQUENCES;

CHLOROETHENE; DNA 16S; ETHYLENE; UNCLASSIFIED DRUG;

MOLECULAR ANALYSIS;

ANAEROBIC BACTERIUM; ARTICLE; BACTERIAL GENETICS; BIOREMEDIATION; CLIMATE; DECHLORINATION; DEHALOCOCCOIDES; DNA SEQUENCE; EUROPE; GEOGRAPHIC DISTRIBUTION; MOLECULAR ECOLOGY; NONHUMAN; NORTH AMERICA; NUCLEIC ACID BASE SUBSTITUTION; NUCLEOTIDE SEQUENCE; PHYLOGENY; SEQUENCE ANALYSIS;

BACTERIA, ANAEROBIC; BASE SEQUENCE; BIODEGRADATION, ENVIRONMENTAL; DNA, RIBOSOMAL; ENVIRONMENTAL POLLUTANTS; EUROPE; MOLECULAR SEQUENCE DATA; NORTH AMERICA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SOIL MICROBIOLOGY; SOIL POLLUTANTS; TETRACHLOROETHYLENE; TRICHLOROETHYLENE; WATER MICROBIOLOGY; WATER POLLUTION, CHEMICAL;

BACTERIA (MICROORGANISMS); DEHALOCOCCOIDES;

EID: 0036151753     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.68.2.485-495.2002     Document Type: Article

References (42)

1. Bacterial dehalo-respiration with chlorinated benzenes
2. Basic local alignment search tool
3. A field evaluation on in situ microbial reductive dehalogenation by biotransformation of chlorinated ethylenes
4. GenBank
5. Model for predicting PCE desorption from contaminated soils
6. Complete reductive dechlorination of trichloroethene by a groundwater microbial consortium
7. Approaches for the identification of microorganisms
8. Phylogenetic diversity of Archaea and Bacteria in a deep subsurface paleosol
9. MEGALIGN. The multiple alignment module of LASERGENE
10. Compilation of small subunit RNA sequences
11. Complete biological reductive transformation of tetrachloroethylene to ethane
12. Biodegradation of trichloroethylene and dichloroethylene in contaminated soil and groundwater
13. Reductive dechlorination of high concentrations of tetrachloroethene to ethene by an anaerobic enrichment culture in the absence of methanogenesis
14. Field and laboratory studies of sequential anaerobic-aerobic chlorinated solvent biodegradation
15. Bioaugmentation for accelerated in situ anaerobic bioremediation
16. Biochemical diversity of trichloroethylene metabolism
17. PHYLIP-phylogeny inference package (version 3.5)
18. Biological reductive dechlorination of tetrachloroethylene and trichloroethylene to ethylene under methanogenic conditions
19. Molecular microbial diversity of an anaerobic digestor as determined by small-subunit rDNA sequence analysis
20. Use of bioaugmentation to stimulate complete reductive dechlorination of trichloroethene in Dover soil columns
21. s) for reductive dehalogenation
22. Using a molecular approach to monitor a bioaugmentation pilot
23. Dehalobacter restrictus gen. nov. and sp. nov., a strictly anaerobic bacterium that reductively dechlorinates tetra- and trich[oroethene in anaerobic respiration
24. Microcosms and in situ field studies of enhanced biotransformation of trichloroethylene by phenol-utilizing organisms
25. New perspectives on microbial dehalogenation of chlorinated solvents: Insights from the field
26. 16S rRNA gene-based detection of tetrachloroethene-dechlorinating Desulfuromonas and Dehalococcoides species
27. The RDP (Ribosomal Database Project) continues
28. Reductive dechlorination of chlorinated ethenes and 1,2-dichloroethane by "Dehalococcoides ethenogenes" 195
29. Isolation of a bacterium that reductively dechlorinates tetrachloroethene to ethene
30. 2-utilizing enrichment culture that reductively dechlorinates tetrachloroethene to vinyl chloride and ethene in the absence of methanogenesis and acetogenesis
31. Breathing with chlorinated solvents
32. Tetrachloroethene metabolism of Dehalospirillum multivorans
33. Reductive dechlorination of chlorinated ethene DNAPLs by a culture enriched from contaminated groundwater
34. Anaerobic biodegradation of chlorinated solvents: Comparative laboratory study of aquifer microcosms
35. Improved tools for biological sequence comparison
36. Characterization of a defined 2,3,5,6-tetrachlorobiphenyl-or-tho-dechlorinating microbial community by comparative sequence analysis of genes coding for 16S rRNA
37. In vitro studies on reductive vinyl chloride dehalogenation by an anaerobic mixed culture
38. Isolation and characterization of Dehalospirillum multivorans gen. nov., sp. nov., a tetrachloroethene-utilizing, strictly anaerobic bacterium
39. SeqMan. Contig assembly
40. Clustal W - Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
41. Bacterial evolution
42. Competition for hydrogen within a chlorinated solvent dehalogenating anaerobic culture