메뉴 건너뛰기




Volumn 6, Issue 6, 2008, Pages 441-454

The ecology and biotechnology of sulphate-reducing bacteria

Author keywords

[No Author keywords available]

Indexed keywords

HEAVY METAL; HYDROGEN; HYDROGEN SULFIDE; RIBOSOME RNA; RNA 16S; SULFATE; ZINC SULFIDE;

EID: 43849095105     PISSN: 17401526     EISSN: None     Source Type: Journal    
DOI: 10.1038/nrmicro1892     Document Type: Review
Times cited : (1770)

References (151)
  • 1
    • 0019999242 scopus 로고
    • Mineralization of organic matter in the seabed - the role of sulphate reduction
    • Jørgensen, B. B. Mineralization of organic matter in the seabed - the role of sulphate reduction. Nature 296, 643-645 (1982).
    • (1982) Nature , vol.296 , pp. 643-645
    • Jørgensen, B.B.1
  • 2
    • 34248204828 scopus 로고    scopus 로고
    • eds Dworkin, M, Schleifer, K.-H. & Stackebrandt, E, Springer Verlag, New York
    • Rabus, R., Hansen, T. A. & Widdel, F. in The Prokaryotes (eds Dworkin, M., Schleifer, K.-H. & Stackebrandt, E.) 659-768 (Springer Verlag, New York, 2006).
    • (2006) The Prokaryotes , pp. 659-768
    • Rabus, R.1    Hansen, T.A.2    Widdel, F.3
  • 4
  • 6
    • 0032947993 scopus 로고    scopus 로고
    • Desulfobacca acetoxidans gen. nov. sp. nov., a novel acetate-degrading sulphate reducer isolated from sulfidogenic sludge
    • Oude Elferink, S. J. W. H., Akkermans-van Vliet, W. M., Bogte, J. J. & Stams, A. J. M. Desulfobacca acetoxidans gen. nov. sp. nov., a novel acetate-degrading sulphate reducer isolated from sulfidogenic sludge. Int. J. Syst. Bacteriol. 49, 345-350 (1999).
    • (1999) Int. J. Syst. Bacteriol , vol.49 , pp. 345-350
    • Oude Elferink, S.J.W.H.1    Akkermans-van Vliet, W.M.2    Bogte, J.J.3    Stams, A.J.M.4
  • 8
    • 0036272479 scopus 로고    scopus 로고
    • Desulfobulbus mediterraneus sp. nov., a sulphate-reducing bacterium growing on mono- and disaccharides
    • Sass, A., Rutters, H., Cypionka, H. & Sass, H. Desulfobulbus mediterraneus sp. nov., a sulphate-reducing bacterium growing on mono- and disaccharides. Arch. Microbiol. 177, 468-474 (2002).
    • (2002) Arch. Microbiol , vol.177 , pp. 468-474
    • Sass, A.1    Rutters, H.2    Cypionka, H.3    Sass, H.4
  • 9
    • 0032446558 scopus 로고    scopus 로고
    • Desulfovibrio aminophilus sp. nov., a novel amino acid degrading and sulphate reducing bacterium from an anaerobic dairy wastewater lagoon
    • Baena, S., Fardeau, M.-L. Labat, M., Ollivier, B., Garcia, J.-L. & Patel, B. K. C. Desulfovibrio aminophilus sp. nov., a novel amino acid degrading and sulphate reducing bacterium from an anaerobic dairy wastewater lagoon. J. Syst. Appl. Microbiol. 21, 498-504 (1998).
    • (1998) J. Syst. Appl. Microbiol , vol.21 , pp. 498-504
    • Baena, S.1    Fardeau, M.-L.2    Labat, M.3    Ollivier, B.4    Garcia, J.-L.5    Patel, B.K.C.6
  • 10
    • 0021810316 scopus 로고
    • Utilization of amino acids as energy substrates by two marine Desulfovibrio strains
    • Stams, A. J. M., Hansen, T. A. & Skyring, G. W. Utilization of amino acids as energy substrates by two marine Desulfovibrio strains. FEMS Microbiol. Ecol. 31, 11-15 (1985).
    • (1985) FEMS Microbiol. Ecol , vol.31 , pp. 11-15
    • Stams, A.J.M.1    Hansen, T.A.2    Skyring, G.W.3
  • 11
    • 0023115068 scopus 로고
    • Properties of Desulfovibrio carbinolicus sp. nov. and other sulfate reducing bacteria isolated from an anaerobic purification plant
    • Nanninga, H. J. & Gottschal, J. C. Properties of Desulfovibrio carbinolicus sp. nov. and other sulfate reducing bacteria isolated from an anaerobic purification plant. Appl. Environ. Microbiol. 53, 802-809 (1987).
    • (1987) Appl. Environ. Microbiol , vol.53 , pp. 802-809
    • Nanninga, H.J.1    Gottschal, J.C.2
  • 12
    • 0001292523 scopus 로고
    • A new sporeforming thermophilic methylotrophic sulphate-reducing bacterium, Desulfotomaculum kuznetsovii sp. nov
    • Nazina, T. N., Ivanova, A. E., Kanchaveli, L. P. & Rozanova, E. P. A new sporeforming thermophilic methylotrophic sulphate-reducing bacterium, Desulfotomaculum kuznetsovii sp. nov. Mikrobiologiia 57, 823-827 (1987).
    • (1987) Mikrobiologiia , vol.57 , pp. 823-827
    • Nazina, T.N.1    Ivanova, A.E.2    Kanchaveli, L.P.3    Rozanova, E.P.4
  • 13
    • 26244438487 scopus 로고    scopus 로고
    • Desulfotomaculum carboxydovorans sp. nov., a novel sulphate-reducing bacterium capable of growth at 100% CO
    • Parshina, S. N. et al. Desulfotomaculum carboxydovorans sp. nov., a novel sulphate-reducing bacterium capable of growth at 100% CO. Int. J. Syst. Evol. Microbiol. 55, 2159-2165 (2005).
    • (2005) Int. J. Syst. Evol. Microbiol , vol.55 , pp. 2159-2165
    • Parshina, S.N.1
  • 14
    • 34250203911 scopus 로고    scopus 로고
    • Archaeoglobus fulgidus couples CO oxidation to sulphate reduction and acetogenesis with transient formate accumulation
    • Henstra, A. M., Dijkema, C. & Stams, A. J. M. Archaeoglobus fulgidus couples CO oxidation to sulphate reduction and acetogenesis with transient formate accumulation. Environ. Microbiol. 9, 1836-1841 (2007).
    • (2007) Environ. Microbiol , vol.9 , pp. 1836-1841
    • Henstra, A.M.1    Dijkema, C.2    Stams, A.J.M.3
  • 15
    • 0028241287 scopus 로고
    • Anaerobic degradation of methylmercaptan and dimethyl sulfide by newly isolated thermophilic sulfate-reducing bacteria
    • Tanimoto, Y. & Bak, F. Anaerobic degradation of methylmercaptan and dimethyl sulfide by newly isolated thermophilic sulfate-reducing bacteria. Appl. Environ. Microbiol. 60, 2450-2455 (1994).
    • (1994) Appl. Environ. Microbiol , vol.60 , pp. 2450-2455
    • Tanimoto, Y.1    Bak, F.2
  • 16
    • 0023100615 scopus 로고
    • Chemolithotrophic growth of Desulfovibrio sulfodismutans sp. nov. by disproportionation of inorganic compounds
    • Bak, F. & Pfennig, N. Chemolithotrophic growth of Desulfovibrio sulfodismutans sp. nov. by disproportionation of inorganic compounds. Arch. Microbiol. 147, 184-189 (1987).
    • (1987) Arch. Microbiol , vol.147 , pp. 184-189
    • Bak, F.1    Pfennig, N.2
  • 17
    • 21344449059 scopus 로고    scopus 로고
    • 16 fractionation during sulphur disproportionation by Desulfobulbus propionicus. Geomicrobiol. J. 22, 219-226 (2005).
    • 16 fractionation during sulphur disproportionation by Desulfobulbus propionicus. Geomicrobiol. J. 22, 219-226 (2005).
  • 18
    • 0027180582 scopus 로고
    • Complete oxidation of toluene under strictly anoxic conditions by a new sulfate-reducing bacterium
    • Rabus, R., Nordhaus, R., Ludwig, W. & Widdel, F. Complete oxidation of toluene under strictly anoxic conditions by a new sulfate-reducing bacterium. Appl. Environ. Microbiol. 59, 1444-1451 (1993).
    • (1993) Appl. Environ. Microbiol , vol.59 , pp. 1444-1451
    • Rabus, R.1    Nordhaus, R.2    Ludwig, W.3    Widdel, F.4
  • 19
    • 0032987149 scopus 로고    scopus 로고
    • Anaerobic oxidation of o-xylene, m xylene, and homologous alkylbenzenes by new types of sulfate-reducing bacteria
    • Harms, G. et al. Anaerobic oxidation of o-xylene, m xylene, and homologous alkylbenzenes by new types of sulfate-reducing bacteria. Appl. Environ. Microbiol. 65, 999-1004 (1999).
    • (1999) Appl. Environ. Microbiol , vol.65 , pp. 999-1004
    • Harms, G.1
  • 20
    • 3142628113 scopus 로고    scopus 로고
    • Degradation of o-xylene and m-xylene by a novel sulphate-reducer belonging to the genus Desulfotomaculum
    • Morasch, B, Schink, B., Tebbe, C. C. & Meckenstock, R. U. Degradation of o-xylene and m-xylene by a novel sulphate-reducer belonging to the genus Desulfotomaculum. Arch. Microbiol. 181, 407-417 (2004).
    • (2004) Arch. Microbiol , vol.181 , pp. 407-417
    • Morasch, B.1    Schink, B.2    Tebbe, C.C.3    Meckenstock, R.U.4
  • 21
    • 0031694750 scopus 로고    scopus 로고
    • Growth, natural relationships, cellular fatty acids and metabolic adaptation of sulfate-reducing bacteria that utilize long-chain alkanes under anoxic conditions
    • Aeckersberg, F., Rainey, F. A. & Widdel, F. Growth, natural relationships, cellular fatty acids and metabolic adaptation of sulfate-reducing bacteria that utilize long-chain alkanes under anoxic conditions. Arch. Microbiol. 170, 361-369 (1998).
    • (1998) Arch. Microbiol , vol.170 , pp. 361-369
    • Aeckersberg, F.1    Rainey, F.A.2    Widdel, F.3
  • 22
    • 0344947890 scopus 로고    scopus 로고
    • Isolation and characterization of a sulfate-reducing bacterium that anaerobically degrades alkanes
    • So, C. M. & Young, L. Y. Isolation and characterization of a sulfate-reducing bacterium that anaerobically degrades alkanes. Appl. Environ. Microbiol. 65, 2969-2976 (1999).
    • (1999) Appl. Environ. Microbiol , vol.65 , pp. 2969-2976
    • So, C.M.1    Young, L.Y.2
  • 23
    • 33845799665 scopus 로고    scopus 로고
    • Davidova, I. A., Duncan, K. E., Choi, O. K. & Suflita, J. M. Desulfoglaeba alkanexedens gen. nov., sp. nov., an n alkane-degrading, sulphate-reducing bacterium. Int. J. Syst. Evol. Microbiol. 56, 2737-2742 (2006).
    • Davidova, I. A., Duncan, K. E., Choi, O. K. & Suflita, J. M. Desulfoglaeba alkanexedens gen. nov., sp. nov., an n alkane-degrading, sulphate-reducing bacterium. Int. J. Syst. Evol. Microbiol. 56, 2737-2742 (2006).
  • 24
    • 0842345384 scopus 로고    scopus 로고
    • Cravo-Laureau, C., Matheron, R., Cayol. J.-L. Joulian, C. & Hirschler-Rea, A. Desulfatibacillum aliphaticivorans gen. nov., spec. nov., and n-alkane- and n-alkene-degrading, sulphate-reducing bacterium. Int. J. Syst. Evol. Microbiol. 54 77-83 (2004).
    • Cravo-Laureau, C., Matheron, R., Cayol. J.-L. Joulian, C. & Hirschler-Rea, A. Desulfatibacillum aliphaticivorans gen. nov., spec. nov., and n-alkane- and n-alkene-degrading, sulphate-reducing bacterium. Int. J. Syst. Evol. Microbiol. 54 77-83 (2004).
  • 26
    • 35349017819 scopus 로고    scopus 로고
    • Anaerobic oxidation of short-chain hydrocarbons by marine sulphate-redudcing bacteria
    • Kniemeyer, O. et al. Anaerobic oxidation of short-chain hydrocarbons by marine sulphate-redudcing bacteria. Nature 449 898-901 (2007).
    • (2007) Nature , vol.449 , pp. 898-901
    • Kniemeyer, O.1
  • 27
    • 0346979764 scopus 로고
    • Methane consumption in Cariaco trench waters and sediments
    • Reeburgh, W. S. Methane consumption in Cariaco trench waters and sediments. Earth Planet. Sci. Lett. 28, 337-344 (1976).
    • (1976) Earth Planet. Sci. Lett , vol.28 , pp. 337-344
    • Reeburgh, W.S.1
  • 28
    • 0028583232 scopus 로고
    • Field and laboratory studies of methane oxidation in an anoxic sediment - evidence for a methanogen-sulphate reducer consortium
    • Hoehler, T. M., Alperin, M. J., Albert, D. B. & Martens, C. S. Field and laboratory studies of methane oxidation in an anoxic sediment - evidence for a methanogen-sulphate reducer consortium. Global Biogeochem. Cycles 8, 451-463 (1994).
    • (1994) Global Biogeochem. Cycles , vol.8 , pp. 451-463
    • Hoehler, T.M.1    Alperin, M.J.2    Albert, D.B.3    Martens, C.S.4
  • 29
    • 18844481026 scopus 로고    scopus 로고
    • A marine microbial consortium apparently mediating anaerobic oxidation of methane
    • Boetius, A. et al. A marine microbial consortium apparently mediating anaerobic oxidation of methane. Nature 407, 623-626 (2000).
    • (2000) Nature , vol.407 , pp. 623-626
    • Boetius, A.1
  • 30
    • 0035317030 scopus 로고    scopus 로고
    • Comparative analysis of methane-oxidizing archaea and sulfate-reducing bacteria in anoxic marine sediments
    • Orphan, V. J. et al. Comparative analysis of methane-oxidizing archaea and sulfate-reducing bacteria in anoxic marine sediments. Appl. Environ. Microbiol. 67, 1922-1934 (2001).
    • (2001) Appl. Environ. Microbiol , vol.67 , pp. 1922-1934
    • Orphan, V.J.1
  • 31
    • 33846094482 scopus 로고    scopus 로고
    • In vitro cell growth of marine archaeal-bacterial consortia during anaerobic oxidation of methane with sulphate
    • Nauhaus, K., Albrecht, M., Elvert, M., Boetius, A. & Widdel F. In vitro cell growth of marine archaeal-bacterial consortia during anaerobic oxidation of methane with sulphate. Environ. Microbiol. 9, 187-196 (2007).
    • (2007) Environ. Microbiol , vol.9 , pp. 187-196
    • Nauhaus, K.1    Albrecht, M.2    Elvert, M.3    Boetius, A.4    Widdel, F.5
  • 32
    • 33847763734 scopus 로고    scopus 로고
    • Methane and sulphate profiles within the subsurface of a tidal flat are reflected by the distribution of sulphate-reducing bacteria and methanogenic archaea
    • Wilms, R., Sass, H., Kopke, B., Cypionka. H. & Engelen, B. Methane and sulphate profiles within the subsurface of a tidal flat are reflected by the distribution of sulphate-reducing bacteria and methanogenic archaea. FEMS Microbiol. Ecol. 59, 611-621 (2007).
    • (2007) FEMS Microbiol. Ecol , vol.59 , pp. 611-621
    • Wilms, R.1    Sass, H.2    Kopke, B.3    Cypionka, H.4    Engelen, B.5
  • 33
    • 0036045379 scopus 로고    scopus 로고
    • In vitro demonstration of anaerobic oxidation of methane coupled to sulphate reduction in sediment from a marine gas hydrate area
    • Nauhaus, K., Boetius, A., Krüger, M. & Widdel, F. In vitro demonstration of anaerobic oxidation of methane coupled to sulphate reduction in sediment from a marine gas hydrate area. Environ. Microbiol. 4, 296-305 (2002).
    • (2002) Environ. Microbiol , vol.4 , pp. 296-305
    • Nauhaus, K.1    Boetius, A.2    Krüger, M.3    Widdel, F.4
  • 34
    • 38149077985 scopus 로고    scopus 로고
    • Methyl sulfides as intermediates in the anaerobic oxidation of methane
    • Moran, J. J. et al. Methyl sulfides as intermediates in the anaerobic oxidation of methane. Environ. Microbiol. 10, 162-173 (2008).
    • (2008) Environ. Microbiol , vol.10 , pp. 162-173
    • Moran, J.J.1
  • 35
    • 34248196945 scopus 로고    scopus 로고
    • Use of, 16S rRNA gene based clone libraries to assess microbial communities potentially involved in anaerobic methane oxidation in a Mediterranean cold seep
    • Heijs, S. K., Haese, R. R., van der Wielen, P. W., Forney, L. J. & van Elsas, J. D. Use of, 16S rRNA gene based clone libraries to assess microbial communities potentially involved in anaerobic methane oxidation in a Mediterranean cold seep. Microb. Ecol. 53, 384-398 (2007).
    • (2007) Microb. Ecol , vol.53 , pp. 384-398
    • Heijs, S.K.1    Haese, R.R.2    van der Wielen, P.W.3    Forney, L.J.4    van Elsas, J.D.5
  • 36
    • 34249660046 scopus 로고    scopus 로고
    • Diversity and abundance of aerobic and anaerobic methane oxidizers at the Haakon Mosby Mud Volcano, Barents Sea
    • Lösekann, T. et al. Diversity and abundance of aerobic and anaerobic methane oxidizers at the Haakon Mosby Mud Volcano, Barents Sea. Appl. Environ. Microbiol. 73, 3348-3362 (2007).
    • (2007) Appl. Environ. Microbiol , vol.73 , pp. 3348-3362
    • Lösekann, T.1
  • 37
    • 33846033212 scopus 로고    scopus 로고
    • Diversity and abundance of sulphate-reducing microorganisms in the sulphate and methane zones of a marine sediment, Black Sea
    • Leloup, J. et al. Diversity and abundance of sulphate-reducing microorganisms in the sulphate and methane zones of a marine sediment, Black Sea. Environ. Microbiol. 9, 131-142 (2007).
    • (2007) Environ. Microbiol , vol.9 , pp. 131-142
    • Leloup, J.1
  • 38
    • 0025050853 scopus 로고
    • Formation of thiosulphate and trithionate during sulphite reduction by washed cells of Desulfovibrio desulphuricans
    • Fitz, R. M. & Cypionka, H. Formation of thiosulphate and trithionate during sulphite reduction by washed cells of Desulfovibrio desulphuricans. Arch. Microbiol. 154, 400-406 (1990).
    • (1990) Arch. Microbiol , vol.154 , pp. 400-406
    • Fitz, R.M.1    Cypionka, H.2
  • 39
    • 24044543300 scopus 로고    scopus 로고
    • Deletion of flavoredoxin gene in Desulfvibrio gigas reveals its participation in thiosulphate reduction
    • Broco; M., Rousset, M., Oliveira, S. & Rodrigues-Pousada, C. Deletion of flavoredoxin gene in Desulfvibrio gigas reveals its participation in thiosulphate reduction. FEBS Lett. 579, 4803-4807 (2005).
    • (2005) FEBS Lett , vol.579 , pp. 4803-4807
    • Broco, M.1    Rousset, M.2    Oliveira, S.3    Rodrigues-Pousada, C.4
  • 40
    • 0017819828 scopus 로고
    • Growth yields and growth rates of Desulfovibrio vulgaris (Marburg) growing on hydrogen plus sulphate and hydrogen plus thiosulphate as sole energy sources
    • Badziong, W. & Thauer, R. K. Growth yields and growth rates of Desulfovibrio vulgaris (Marburg) growing on hydrogen plus sulphate and hydrogen plus thiosulphate as sole energy sources. Arch. Microbiol. 117, 209-214 (1978).
    • (1978) Arch. Microbiol , vol.117 , pp. 209-214
    • Badziong, W.1    Thauer, R.K.2
  • 42
    • 0019802315 scopus 로고
    • Hydrogen cycling as a general mechanism for energy coupling in the sulphate-reducing bacteria, Desulfovibrio sp
    • Odom, J. M. & Peck, H. D. Hydrogen cycling as a general mechanism for energy coupling in the sulphate-reducing bacteria, Desulfovibrio sp. FEMS Microbiol. Lett. 12, 47-50 (1981).
    • (1981) FEMS Microbiol. Lett , vol.12 , pp. 47-50
    • Odom, J.M.1    Peck, H.D.2
  • 43
    • 0028152341 scopus 로고
    • Nitrate reduction in a sulfate-reducing bacterium, Desulfovibrio desulfuricans, isolated from rice paddy soil: Sulphide inhibition, kinetics, and regulation
    • Dalsgaard, T. & Bak, F. Nitrate reduction in a sulfate-reducing bacterium, Desulfovibrio desulfuricans, isolated from rice paddy soil: Sulphide inhibition, kinetics, and regulation. Appl. Environ. Microbiol. 60, 291-297 (1994).
    • (1994) Appl. Environ. Microbiol , vol.60 , pp. 291-297
    • Dalsgaard, T.1    Bak, F.2
  • 44
    • 33746256562 scopus 로고    scopus 로고
    • Löpez-Corté A, Fardeau, M. L, Fauque, G., Joulian, C. & Ollivier, B. Reclassification of the sulphate- and nitrate-reducing bacterium Desulfovibrio vulgaris subsp. oxamicus as Desulfovibrio oxamicus sp. nov., comb. nov. Int. J. Syst. Evol. Microbiol. 56, 1495-1499 (2006).
    • Löpez-Corté A, Fardeau, M. L, Fauque, G., Joulian, C. & Ollivier, B. Reclassification of the sulphate- and nitrate-reducing bacterium Desulfovibrio vulgaris subsp. oxamicus as Desulfovibrio oxamicus sp. nov., comb. nov. Int. J. Syst. Evol. Microbiol. 56, 1495-1499 (2006).
  • 45
    • 0020619037 scopus 로고
    • Dissimilatory nitrate reduction by a strain of Desulfovibrio desulfuricans
    • Keith. S. M., & Herbert, R. A. Dissimilatory nitrate reduction by a strain of Desulfovibrio desulfuricans. FEMS Microbiol. Lett. 18 55-59 (1983).
    • (1983) FEMS Microbiol. Lett , vol.18 , pp. 55-59
    • Keith, S.M.1    Herbert, R.A.2
  • 46
    • 0031253537 scopus 로고    scopus 로고
    • Nitrate and nitrite utilization in sulphate-reducing bacteria
    • Moura, I., Bursakov, S., Costa, C. & Moura, J. J. G. Nitrate and nitrite utilization in sulphate-reducing bacteria. Anaerobe 3, 279-290 (1997).
    • (1997) Anaerobe , vol.3 , pp. 279-290
    • Moura, I.1    Bursakov, S.2    Costa, C.3    Moura, J.J.G.4
  • 47
    • 0027844082 scopus 로고
    • Enzymatic iron and uranium reduction by sulphate-reducing bacberia
    • Lovley, D. R., Roden, E. E., Phillips, E. J. P. & Woodward, J. C. Enzymatic iron and uranium reduction by sulphate-reducing bacberia. Mar. Geol. 113, 41-53 (1993).
    • (1993) Mar. Geol , vol.113 , pp. 41-53
    • Lovley, D.R.1    Roden, E.E.2    Phillips, E.J.P.3    Woodward, J.C.4
  • 48
    • 37449009183 scopus 로고    scopus 로고
    • Ferric iron reduction by Desulfovibrio vulgaris Hildenborough wild type and energy metabolism mutants
    • Park, H. S., Lin, S. & Voordouw, G. Ferric iron reduction by Desulfovibrio vulgaris Hildenborough wild type and energy metabolism mutants. Antonie van Leeuwenhoek 93, 79-85 (2007).
    • (2007) Antonie van Leeuwenhoek , vol.93 , pp. 79-85
    • Park, H.S.1    Lin, S.2    Voordouw, G.3
  • 49
    • 0026614445 scopus 로고
    • Reduction of uranium by Desulfovibrio desulfuricans
    • Lovley, D. R. & Phillips, E. J. Reduction of uranium by Desulfovibrio desulfuricans. Appl. Environ. Microbiol. 58, 850-856 (1992).
    • (1992) Appl. Environ. Microbiol , vol.58 , pp. 850-856
    • Lovley, D.R.1    Phillips, E.J.2
  • 50
    • 0033051555 scopus 로고    scopus 로고
    • Reduction of technetium by Desulfovibrio desulfuricans: Biocatalyst characterization and use in a flowthrough bioreactor
    • Lloyd, J. R., Ridley, J., Khizniak, T., Lyalikova, N. N. & Macaskie, L. E. Reduction of technetium by Desulfovibrio desulfuricans: biocatalyst characterization and use in a flowthrough bioreactor. Appl. Environ. Microbiol. 65, 2691-2696 (1999).
    • (1999) Appl. Environ. Microbiol , vol.65 , pp. 2691-2696
    • Lloyd, J.R.1    Ridley, J.2    Khizniak, T.3    Lyalikova, N.N.4    Macaskie, L.E.5
  • 51
    • 0031930742 scopus 로고    scopus 로고
    • Reduction of Cr, Mo, Se and U by Desulfovibrio desulfuricans immobilized in polyacrylamide gels
    • Tucker, M. D., Barton, L. L. & Thompson, B. M. Reduction of Cr, Mo, Se and U by Desulfovibrio desulfuricans immobilized in polyacrylamide gels. J. Ind. Microbiol. Biotechnol. 20, 13-19 (1998).
    • (1998) J. Ind. Microbiol. Biotechnol , vol.20 , pp. 13-19
    • Tucker, M.D.1    Barton, L.L.2    Thompson, B.M.3
  • 52
    • 0028032013 scopus 로고
    • Reduction of chromate-by Desulfovibrio vulgaris and its c, cytochrome
    • Lovley, D. R. & Phillips, E. J. Reduction of chromate-by Desulfovibrio vulgaris and its c, cytochrome. Appl. Environ. Microbiol. 60, 726-728 (1994).
    • (1994) Appl. Environ. Microbiol , vol.60 , pp. 726-728
    • Lovley, D.R.1    Phillips, E.J.2
  • 53
    • 0033963359 scopus 로고    scopus 로고
    • Two new arsenate/sulphate-reducing bacteria: Mechanisms of arsenate reduction
    • Macy, J. M., Santini, J. M., Pauling, B. V., O'Neill, A. H. & Sly, L. I. Two new arsenate/sulphate-reducing bacteria: Mechanisms of arsenate reduction. Arch. Microbiol. 173, 49-57 (2000).
    • (2000) Arch. Microbiol , vol.173 , pp. 49-57
    • Macy, J.M.1    Santini, J.M.2    Pauling, B.V.3    O'Neill, A.H.4    Sly, L.I.5
  • 55
    • 0029813694 scopus 로고    scopus 로고
    • Lie, T. J., Pitta, T., Leadbetter. E. R., Godchaux, W. 3rd & Leadbetter, J. R. Sulfonates: Novel electron acceptors in anaerobic respiration. Arch. Microbiol. 166, 204-210 (1996).
    • Lie, T. J., Pitta, T., Leadbetter. E. R., Godchaux, W. 3rd & Leadbetter, J. R. Sulfonates: Novel electron acceptors in anaerobic respiration. Arch. Microbiol. 166, 204-210 (1996).
  • 56
    • 0025737238 scopus 로고
    • Kinetics of two complementary hydrogen sink reactions in a defined 3-chlorobenzoate degrading methanogenic co-culture
    • Dolfing, J. & Tiedje, J. M. Kinetics of two complementary hydrogen sink reactions in a defined 3-chlorobenzoate degrading methanogenic co-culture. FEMS Microbiol. Ecol. 86, 25-32 (1991).
    • (1991) FEMS Microbiol. Ecol , vol.86 , pp. 25-32
    • Dolfing, J.1    Tiedje, J.M.2
  • 57
    • 0025296244 scopus 로고
    • Desulfomanile tiedjei gen. nov., sp. nov., a novel, anaerobic, dehalogenating, sulphate-reducing bacterium
    • DeWeerd, K. A. A., Mandelco, L, Tanner, R. S., Woese, C. R. & Suflita, J. M. Desulfomanile tiedjei gen. nov., sp. nov., a novel, anaerobic, dehalogenating, sulphate-reducing bacterium. Arch. Microbiol. 154, 23-30 (1990).
    • (1990) Arch. Microbiol , vol.154 , pp. 23-30
    • DeWeerd, K.A.A.1    Mandelco, L.2    Tanner, R.S.3    Woese, C.R.4    Suflita, J.M.5
  • 59
    • 0022572553 scopus 로고
    • Microbial ecophysiology of whey biomethanation: Characterization of bacterial trophic populations and prevalent species in continuous culture
    • Chartrain, M. & Zeikus, J. G. Microbial ecophysiology of whey biomethanation: Characterization of bacterial trophic populations and prevalent species in continuous culture. Appl. Environ. Microbiol. 51, 188-196 (1986).
    • (1986) Appl. Environ. Microbiol , vol.51 , pp. 188-196
    • Chartrain, M.1    Zeikus, J.G.2
  • 60
    • 42349106001 scopus 로고    scopus 로고
    • eds Dworkin, M, Schleifer, K.-H. & Stackebrandt, E, Springer Verlag. New York
    • Schink, B. & Stams, A. J. M. in The Prokaryotes (eds Dworkin, M., Schleifer, K.-H. & Stackebrandt, E.) 309-335 (Springer Verlag. New York, 2006).
    • (2006) The Prokaryotes , pp. 309-335
    • Schink, B.1    Stams, A.J.M.2
  • 61
    • 0036202299 scopus 로고    scopus 로고
    • Desulfotomaculum thermobenzoicum subsp. thermosyntrophicum subsp. nov., a thermophilic, syntrophic, propionate-oxidizing, spore-forming bacterium
    • Plugge, C. M., Balk, M. & Stams, A. J. M. Desulfotomaculum thermobenzoicum subsp. thermosyntrophicum subsp. nov., a thermophilic, syntrophic, propionate-oxidizing, spore-forming bacterium. Int. J. Syst Evol. Microbiol. 52, 391-399 (2002).
    • (2002) Int. J. Syst Evol. Microbiol , vol.52 , pp. 391-399
    • Plugge, C.M.1    Balk, M.2    Stams, A.J.M.3
  • 62
    • 0019140895 scopus 로고    scopus 로고
    • Boone, D. R. & Bryant, M. P. Propionate-degrading bacterium, Syntrophobacter wolinii sp. nov. gen. nov., from methanogenic ecosystems. Appl. Environ. Microbiol. 40, 626-632 (1980).
    • Boone, D. R. & Bryant, M. P. Propionate-degrading bacterium, Syntrophobacter wolinii sp. nov. gen. nov., from methanogenic ecosystems. Appl. Environ. Microbiol. 40, 626-632 (1980).
  • 63
    • 0027942194 scopus 로고
    • Pure culture and cytological properties of Syntrophobacter wolinii
    • Wallrabenstein, C., Hauschild, E. & Schink, B. Pure culture and cytological properties of Syntrophobacter wolinii. FEMS Microbiol. Lett. 123, 249-254 (1994).
    • (1994) FEMS Microbiol. Lett , vol.123 , pp. 249-254
    • Wallrabenstein, C.1    Hauschild, E.2    Schink, B.3
  • 64
    • 0027297164 scopus 로고
    • Phylogenetic analysis of Syntrophobacter wolinii reveals a relationship with sulphate-reducing bacteria
    • Harmsen, H., Wullings, B., Akkermans, A. D. L, Ludwig, W. & Stams, A. J. M. Phylogenetic analysis of Syntrophobacter wolinii reveals a relationship with sulphate-reducing bacteria. Arch. Microbiol. 160, 238-240 (1993).
    • (1993) Arch. Microbiol , vol.160 , pp. 238-240
    • Harmsen, H.1    Wullings, B.2    Akkermans, A.D.L.3    Ludwig, W.4    Stams, A.J.M.5
  • 65
    • 0038050535 scopus 로고    scopus 로고
    • Metabolic interactions between methanogenic consortia and anaerobic respiring bacteria
    • Stams, A. J. M., Oude Elferink, S. J. W. H. & Westermann. P. Metabolic interactions between methanogenic consortia and anaerobic respiring bacteria. Adv. Biochem. Eng. Biotechnol. 81, 31-56 (2003).
    • (2003) Adv. Biochem. Eng. Biotechnol , vol.81 , pp. 31-56
    • Stams, A.J.M.1    Oude Elferink, S.J.W.H.2    Westermann, P.3
  • 66
    • 0000442694 scopus 로고    scopus 로고
    • Brysch, K., Schneider, C., Fuchs, G. & Widdel, F. Lithoautotrophic growth of sulphate-reducing bacteria, and description of Desufolbacterium autotrophicum gen. nov. sp. nov. Arch. Microbiol. 148, 264-274 (1987).
    • Brysch, K., Schneider, C., Fuchs, G. & Widdel, F. Lithoautotrophic growth of sulphate-reducing bacteria, and description of Desufolbacterium autotrophicum gen. nov. sp. nov. Arch. Microbiol. 148, 264-274 (1987).
  • 67
    • 0036044595 scopus 로고    scopus 로고
    • 2 between sulphate reducers, methanogens and homoacetogens in a gas-lift reactor Water
    • 2 between sulphate reducers, methanogens and homoacetogens in a gas-lift reactor Water Sci. Technol. 45, 75-80 (2002).
    • (2002) Sci. Technol , vol.45 , pp. 75-80
    • Weijma, J.1
  • 68
    • 0020411363 scopus 로고
    • Kinetic mechanism for the ability of sulphate reducers to out-compete methanogens for acetate
    • Schönheit, P., Kristjansson, J. K. & Thauer, R. K. Kinetic mechanism for the ability of sulphate reducers to out-compete methanogens for acetate. Arch. Microbiol. 132, 285-288 (1982).
    • (1982) Arch. Microbiol , vol.132 , pp. 285-288
    • Schönheit, P.1    Kristjansson, J.K.2    Thauer, R.K.3
  • 70
    • 0032549602 scopus 로고    scopus 로고
    • Long-term competition between sulphate reducing and methanogenic bacteria in UASB reactors treating volatile fatty acids
    • Omil, F., Lens, P., Visser, A., Hulshoff Pol, L. W. & Lettinga, G. Long-term competition between sulphate reducing and methanogenic bacteria in UASB reactors treating volatile fatty acids. Biotechnol. Bioeng. 57, 676-685 (1998).
    • (1998) Biotechnol. Bioeng , vol.57 , pp. 676-685
    • Omil, F.1    Lens, P.2    Visser, A.3    Hulshoff Pol, L.W.4    Lettinga, G.5
  • 71
    • 0021360484 scopus 로고
    • Competition for sulfate and ethanol among Desulfobacter, Desulfobulbus, and Desulfovibrio species isolated from intertidal sediments
    • Laanbroek, H. J., Geerligs, H. J., Sijtsma, L & Veldkamp, H. Competition for sulfate and ethanol among Desulfobacter, Desulfobulbus, and Desulfovibrio species isolated from intertidal sediments. Appl. Environ. Microbiol. 47, 329-334 (1984).
    • (1984) Appl. Environ. Microbiol , vol.47 , pp. 329-334
    • Laanbroek, H.J.1    Geerligs, H.J.2    Sijtsma, L.3    Veldkamp, H.4
  • 72
    • 0000600726 scopus 로고
    • eds Fletcher, M, Gray, T. R. & Jones, J. G, Cambridge Univ. Press
    • Parkes, R. J. in Ecology of Microbial Communities (eds Fletcher, M., Gray, T. R. & Jones, J. G.) 147-177 (Cambridge Univ. Press, 1987).
    • (1987) Ecology of Microbial Communities , pp. 147-177
    • Parkes, R.J.1
  • 73
    • 0842291638 scopus 로고    scopus 로고
    • Mori, K., Kim, H., Kakegawa, T. & Hanada, S. A novel lineage of sulphate-reducing microorganisms: Thermodesulfobiaceae fam. nov. Thermodesulfobium narugense. gen. nov., sp. nov. a new thermophilic isolate from a hot spring. Extremophiles 7, 283-290 (2003).
    • Mori, K., Kim, H., Kakegawa, T. & Hanada, S. A novel lineage of sulphate-reducing microorganisms: Thermodesulfobiaceae fam. nov. Thermodesulfobium narugense. gen. nov., sp. nov. a new thermophilic isolate from a hot spring. Extremophiles 7, 283-290 (2003).
  • 74
    • 0031824941 scopus 로고    scopus 로고
    • Thermocladium modestius gen. nov., sp. nov. a new genus of rod-shaped, extremely thermophilic crenarchaeote
    • Itoh, T., Suzuki. K-I. & Nakase, T. Thermocladium modestius gen. nov., sp. nov. a new genus of rod-shaped, extremely thermophilic crenarchaeote. Int. J. Syst. Bacteriol. 48, 879-887 (1998).
    • (1998) Int. J. Syst. Bacteriol , vol.48 , pp. 879-887
    • Itoh, T.1    Suzuki, K.-I.2    Nakase, T.3
  • 75
    • 0033031775 scopus 로고    scopus 로고
    • Caldivirga maquilingensis gen. nov., sp. nov. a new genus of rod-shaped crenarchaeote isolated from a hot spring in the Philippines
    • Itoh, T., Suzuki, K-I., Sanches, P. C. & Nakase, T. Caldivirga maquilingensis gen. nov., sp. nov. a new genus of rod-shaped crenarchaeote isolated from a hot spring in the Philippines. Int. J. Syst. Bacteriol. 49, 1157-1163 (1999).
    • (1999) Int. J. Syst. Bacteriol , vol.49 , pp. 1157-1163
    • Itoh, T.1    Suzuki, K.-I.2    Sanches, P.C.3    Nakase, T.4
  • 76
    • 0033909552 scopus 로고    scopus 로고
    • Development of oligonucleotide probes and PCR primers for detecting phylogenetic subgroups of sulfate-reducing bacteria
    • Daly, K., Sharp, R. J. & McCarthy, A. J. Development of oligonucleotide probes and PCR primers for detecting phylogenetic subgroups of sulfate-reducing bacteria. Microbiology 146, 1693-1705 (2000).
    • (2000) Microbiology , vol.146 , pp. 1693-1705
    • Daly, K.1    Sharp, R.J.2    McCarthy, A.J.3
  • 77
    • 0032463021 scopus 로고    scopus 로고
    • Phylogeny of dissimilatory sulfite reductases supports an early origin of sulfate respiration
    • Wagner, M., Roger, A. J., Flax, J. L, Brusseau, G. A. & Stahl, D. A. Phylogeny of dissimilatory sulfite reductases supports an early origin of sulfate respiration. J. Bacteriol. 180, 2975-2982 (1998).
    • (1998) J. Bacteriol , vol.180 , pp. 2975-2982
    • Wagner, M.1    Roger, A.J.2    Flax, J.L.3    Brusseau, G.A.4    Stahl, D.A.5
  • 78
    • 34447508312 scopus 로고    scopus 로고
    • Phylogeny of the alpha and beta subunits of the dissimilatory adenosine-5′- phosphosulfate (APS) reductase from sulfate-reducing prokaryotes - origin and evolution of the dissimilatory sulfate-reduction pathway
    • Meyer, B. & Kuever, J. Phylogeny of the alpha and beta subunits of the dissimilatory adenosine-5′- phosphosulfate (APS) reductase from sulfate-reducing prokaryotes - origin and evolution of the dissimilatory sulfate-reduction pathway. Microbiology 153, 2026-2044 (2007).
    • (2007) Microbiology , vol.153 , pp. 2026-2044
    • Meyer, B.1    Kuever, J.2
  • 80
    • 18444372956 scopus 로고    scopus 로고
    • Nested PCR-denaturing gradient gel electrophoresis approach to determine the diversity of sulfate-reducing bacteria in complex microbial communities
    • Dar, S. A., Kuenen, J. G. & Muyzer, G. Nested PCR-denaturing gradient gel electrophoresis approach to determine the diversity of sulfate-reducing bacteria in complex microbial communities. Appl. Environ. Microbiol. 71, 2325-2330 (2005).
    • (2005) Appl. Environ. Microbiol , vol.71 , pp. 2325-2330
    • Dar, S.A.1    Kuenen, J.G.2    Muyzer, G.3
  • 81
    • 33846462490 scopus 로고    scopus 로고
    • Analysis of diversity and activity of sulfate-reducing bacterial communities in sulfidogenic bioreactors using 16S rRNA and dsrB genes as molecular markers
    • Dar, S. A., Yao, L., van Dongen, U., Kuenen, J. G. & Muyzer, G. Analysis of diversity and activity of sulfate-reducing bacterial communities in sulfidogenic bioreactors using 16S rRNA and dsrB genes as molecular markers. Appl. Environ. Microbiol. 73, 594-604 (2007).
    • (2007) Appl. Environ. Microbiol , vol.73 , pp. 594-604
    • Dar, S.A.1    Yao, L.2    van Dongen, U.3    Kuenen, J.G.4    Muyzer, G.5
  • 82
    • 33745282399 scopus 로고    scopus 로고
    • DsrB gene-based DGGE for community and diversity surveys of sulphate-reducing bacteria
    • Geets, J. et al. DsrB gene-based DGGE for community and diversity surveys of sulphate-reducing bacteria. J. Microbiol. Methods 66 194-205 (2006).
    • (2006) J. Microbiol. Methods , vol.66 , pp. 194-205
    • Geets, J.1
  • 83
    • 0032884934 scopus 로고    scopus 로고
    • Diversity of sulfate-reducing bacteria in oxic and anoxic regions of a microbial mat characterized by comparative analysis of dissimilatory sulfite reductase genes
    • Minz, D. et al. Diversity of sulfate-reducing bacteria in oxic and anoxic regions of a microbial mat characterized by comparative analysis of dissimilatory sulfite reductase genes. Appl. Environ. Microbiol. 65, 4666-4671 (1999).
    • (1999) Appl. Environ. Microbiol , vol.65 , pp. 4666-4671
    • Minz, D.1
  • 84
    • 38449090703 scopus 로고    scopus 로고
    • Molecular analysis of the diversity of sulfate-reducing and sulfur-oxidizing prokaryotes in the environment, using the aprA as functional marker gene
    • Meyer, B. & Kuever, J. Molecular analysis of the diversity of sulfate-reducing and sulfur-oxidizing prokaryotes in the environment, using the aprA as functional marker gene. Appl. Environ. Microbiol. 73, 7664-7679 (2007).
    • (2007) Appl. Environ. Microbiol , vol.73 , pp. 7664-7679
    • Meyer, B.1    Kuever, J.2
  • 85
    • 0036795787 scopus 로고    scopus 로고
    • Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment
    • Loy, A. et al. Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment. Appl. Environ. Microbiol. 68, 5064-5081 (2002).
    • (2002) Appl. Environ. Microbiol , vol.68 , pp. 5064-5081
    • Loy, A.1
  • 86
    • 10444242668 scopus 로고    scopus 로고
    • Microarray and functional gene analyses of sulfate-reducing prokaryotes in low sulfate acidic fens reveal co-occurrence of recognized genera and novel lineages
    • Loy, A. et al. Microarray and functional gene analyses of sulfate-reducing prokaryotes in low sulfate acidic fens reveal co-occurrence of recognized genera and novel lineages. Appl. Environ. Microbiol. 70, 6998-7009 (2004).
    • (2004) Appl. Environ. Microbiol , vol.70 , pp. 6998-7009
    • Loy, A.1
  • 87
    • 0036242945 scopus 로고    scopus 로고
    • Enumeration of 16S rDNA of Desulfotomaculum lineage 1 in rice fields soil by real-time PCR with SybrGreen detection
    • Stubner, S. Enumeration of 16S rDNA of Desulfotomaculum lineage 1 in rice fields soil by real-time PCR with SybrGreen detection. J. Microbiol. Methods 50, 155-164 (2002).
    • (2002) J. Microbiol. Methods , vol.50 , pp. 155-164
    • Stubner, S.1
  • 88
    • 1842509885 scopus 로고    scopus 로고
    • Quantification of Gram-negative sulphate-reducing bacteria in rice field soil by 16S rRNA gene-targeted real-time PCR
    • Stubner, S. Quantification of Gram-negative sulphate-reducing bacteria in rice field soil by 16S rRNA gene-targeted real-time PCR. J. Microbiol. Methods 57, 219-230 (2004).
    • (2004) J. Microbiol. Methods , vol.57 , pp. 219-230
    • Stubner, S.1
  • 89
    • 34247496276 scopus 로고    scopus 로고
    • Diversity, activity, and abundance of sulfate-reducing bacteria in saline and hypersaline soda lakes
    • Foti, M. et al. Diversity, activity, and abundance of sulfate-reducing bacteria in saline and hypersaline soda lakes. Appl. Environ. Microbiol. 73, 2093-2100 (2007).
    • (2007) Appl. Environ. Microbiol , vol.73 , pp. 2093-2100
    • Foti, M.1
  • 90
    • 35148888601 scopus 로고    scopus 로고
    • Quantification of sulfate-reducing bacteria in industrial wastewater by real-time polymerase chain reaction (PCR) using dsrA and opsA genes
    • Ben-Dov, E., Brenner, A. & Kushmaro, A. Quantification of sulfate-reducing bacteria in industrial wastewater by real-time polymerase chain reaction (PCR) using dsrA and opsA genes. Microb. Ecol. 54, 439-451 (2007).
    • (2007) Microb. Ecol , vol.54 , pp. 439-451
    • Ben-Dov, E.1    Brenner, A.2    Kushmaro, A.3
  • 91
    • 0041696956 scopus 로고    scopus 로고
    • Quantification of dissimilatory (bi)sulphite reductase gene expression in Desulfobacterium autotrophicum using real-time RT-PCR
    • Neretin, L. N. et al. Quantification of dissimilatory (bi)sulphite reductase gene expression in Desulfobacterium autotrophicum using real-time RT-PCR. Environ. Microbiol. 5, 660-671 (2003).
    • (2003) Environ. Microbiol , vol.5 , pp. 660-671
    • Neretin, L.N.1
  • 92
    • 34247592880 scopus 로고    scopus 로고
    • Improved 16S rRNA-targeted probe set for analysis of sulfate-reducing bacteria by fluorescence in situ hybridization
    • Lückner, S. et al. Improved 16S rRNA-targeted probe set for analysis of sulfate-reducing bacteria by fluorescence in situ hybridization. J. Microbiol. Methods 69, 523-528 (2007).
    • (2007) J. Microbiol. Methods , vol.69 , pp. 523-528
    • Lückner, S.1
  • 94
    • 14344250484 scopus 로고    scopus 로고
    • Diversity and vertical distribution of cultured and uncultured Deltaproteobacteria in an intertidal mud flat of the Wadden Sea
    • Mussmann, M., Ishii, K., Rabus, R. & Amann, R. Diversity and vertical distribution of cultured and uncultured Deltaproteobacteria in an intertidal mud flat of the Wadden Sea. Environ. Microbiol. 7 405-418 (2005).
    • (2005) Environ. Microbiol , vol.7 , pp. 405-418
    • Mussmann, M.1    Ishii, K.2    Rabus, R.3    Amann, R.4
  • 95
    • 0036136673 scopus 로고    scopus 로고
    • Phylogenetic identification and substrate uptake patterns of sulfate-reducing bacteria inhabiting an oxic-anoxic sewer biofilm determined by combining microautoradiography and fluorescence in situ hybridization
    • Ito, T. et al. Phylogenetic identification and substrate uptake patterns of sulfate-reducing bacteria inhabiting an oxic-anoxic sewer biofilm determined by combining microautoradiography and fluorescence in situ hybridization. Appl. Environ. Microbiol. 68, 356-364 (2002).
    • (2002) Appl. Environ. Microbiol , vol.68 , pp. 356-364
    • Ito, T.1
  • 96
    • 0032560228 scopus 로고    scopus 로고
    • 13C- labelling of biomarkers
    • 13C- labelling of biomarkers. Nature 392, 801-804 (1998).
    • (1998) Nature , vol.392 , pp. 801-804
    • Boschker, H.T.S.1
  • 97
    • 33746778517 scopus 로고    scopus 로고
    • A comparison of stable isotope probing of DNA and phospholipids fatty acids to study prokaryotic functional diversity in sulfate-reducing marine sediment enrichment slurries
    • Webster, G. et al. A comparison of stable isotope probing of DNA and phospholipids fatty acids to study prokaryotic functional diversity in sulfate-reducing marine sediment enrichment slurries. Environ. Microbiol. 8, 1575-1589 (2006).
    • (2006) Environ. Microbiol , vol.8 , pp. 1575-1589
    • Webster, G.1
  • 98
    • 0027375701 scopus 로고
    • 2S in photosynthetic biofilms determined by oligonucleotide probes and microelectrodes
    • 2S in photosynthetic biofilms determined by oligonucleotide probes and microelectrodes. Appl. Environ. Microbiol. 59, 3840-3849 (1993).
    • (1993) Appl. Environ. Microbiol , vol.59 , pp. 3840-3849
    • Ramsing, N.B.1    Kühl, M.2    Jørgensen, B.B.3
  • 99
    • 0030666834 scopus 로고    scopus 로고
    • Genetic diversity and expression of the NiFe hydrogenase large-subunit gene of Desulfovibrio spp. in environmental samples
    • Wawer, C., Jetten, M. S. & Muyzer, G. Genetic diversity and expression of the NiFe hydrogenase large-subunit gene of Desulfovibrio spp. in environmental samples. Appl. Environ. Microbiol. 61, 4360-4369 (1997).
    • (1997) Appl. Environ. Microbiol , vol.61 , pp. 4360-4369
    • Wawer, C.1    Jetten, M.S.2    Muyzer, G.3
  • 100
    • 0033857193 scopus 로고    scopus 로고
    • Community structure, cellular rRNA content, and activity of sulfate-reducing bacteria in marine Arctic sediments
    • Ravenschlag, K., Sahm, K., Knoblauch, C., Jørgensen, B. B. & Amann, R. Community structure, cellular rRNA content, and activity of sulfate-reducing bacteria in marine Arctic sediments. Appl. Environ. Microbiol. 66, 3592-3602 (2000).
    • (2000) Appl. Environ. Microbiol , vol.66 , pp. 3592-3602
    • Ravenschlag, K.1    Sahm, K.2    Knoblauch, C.3    Jørgensen, B.B.4    Amann, R.5
  • 101
    • 0035989439 scopus 로고    scopus 로고
    • Thermodesulfobacterium hydrogeniphilum sp. nov., a thermophilic, chemolithoautotrophic sulfate-reducing bacterium isolated from a deep-sea hydrothermal vent at Guaymas Basin and emendation of the genus Thermodesulfobacterium
    • Jeanthon, C. et al. Thermodesulfobacterium hydrogeniphilum sp. nov., a thermophilic, chemolithoautotrophic sulfate-reducing bacterium isolated from a deep-sea hydrothermal vent at Guaymas Basin and emendation of the genus Thermodesulfobacterium. Int. J. Syst. Evol. Microbiol. 52, 765-772 (2002).
    • (2002) Int. J. Syst. Evol. Microbiol , vol.52 , pp. 765-772
    • Jeanthon, C.1
  • 102
    • 0141447287 scopus 로고    scopus 로고
    • Activity, distribution. and diversity of sulfate reducers and other bacteria in sediments above gas hydrate (Cascadia Margin, Oregon)
    • Knittel, K. et al. Activity, distribution. and diversity of sulfate reducers and other bacteria in sediments above gas hydrate (Cascadia Margin, Oregon). Geomicrobiol. J. 20, 269-294 (2003).
    • (2003) Geomicrobiol. J , vol.20 , pp. 269-294
    • Knittel, K.1
  • 103
    • 21044441938 scopus 로고    scopus 로고
    • Biomarker and 16S rDNA evidence for anaerobic oxidation of methane and related carbonate precipitation in deep-sea mud volcanoes of the Sorokin Trough, Black Sea
    • Stadnitskaia, A. et al. Biomarker and 16S rDNA evidence for anaerobic oxidation of methane and related carbonate precipitation in deep-sea mud volcanoes of the Sorokin Trough, Black Sea. Mar. Geol. 217, 67-96 (2005).
    • (2005) Mar. Geol , vol.217 , pp. 67-96
    • Stadnitskaia, A.1
  • 104
    • 0027971442 scopus 로고
    • Community structure of a microbial mat: The phylogenetic dimension
    • Rissati, J. B., Capman, W. C. & Stahl, D. A. Community structure of a microbial mat: The phylogenetic dimension. Proc. Natl Acad. Sci. USA 91, 10173-10177 (1994).
    • (1994) Proc. Natl Acad. Sci. USA , vol.91 , pp. 10173-10177
    • Rissati, J.B.1    Capman, W.C.2    Stahl, D.A.3
  • 106
    • 0029974630 scopus 로고    scopus 로고
    • Distribution of thermophilic marine sulfate reducers in North Sea oil field waters and oil reservoirs
    • Nilsen, R. K., Beeder, J., Thostenson, T. & Torsvik, T. Distribution of thermophilic marine sulfate reducers in North Sea oil field waters and oil reservoirs. Appl. Environ. Microbiol. 62, 1793-1798 (1996).
    • (1996) Appl. Environ. Microbiol , vol.62 , pp. 1793-1798
    • Nilsen, R.K.1    Beeder, J.2    Thostenson, T.3    Torsvik, T.4
  • 107
    • 33644954983 scopus 로고    scopus 로고
    • Molecular analysis of deep subsurface Cretaceous rock indicates abundant Fe(III)-and and S °-reducing bacteria in a sulfate-rich environment
    • Kovacik, W. P. Jr. Molecular analysis of deep subsurface Cretaceous rock indicates abundant Fe(III)-and and S °-reducing bacteria in a sulfate-rich environment. Environ. Microbiol. 8, 141-155 (2006).
    • (2006) Environ. Microbiol , vol.8 , pp. 141-155
    • Kovacik Jr., W.P.1
  • 108
    • 0031657332 scopus 로고    scopus 로고
    • High genetic and physiological diversity of sulfate-reducing bacteria isolated from an oligotrophic lake sediment
    • Sass, H., Wieringa, E., Cypionka, H., Babenzien, H. D. & Overmann, J. High genetic and physiological diversity of sulfate-reducing bacteria isolated from an oligotrophic lake sediment. Arch. Microbiol. 170, 243-251 (1998).
    • (1998) Arch. Microbiol , vol.170 , pp. 243-251
    • Sass, H.1    Wieringa, E.2    Cypionka, H.3    Babenzien, H.D.4    Overmann, J.5
  • 109
    • 0032947584 scopus 로고    scopus 로고
    • Molecular phylogenetic and biogeochemical studies of sulfate-reducing bacteria in the rhizosphere of Spartina alterniflora
    • Hines, M. E. et al. Molecular phylogenetic and biogeochemical studies of sulfate-reducing bacteria in the rhizosphere of Spartina alterniflora. Appl. Environ. Microbiol. 65, 2209-2216 (1999).
    • (1999) Appl. Environ. Microbiol , vol.65 , pp. 2209-2216
    • Hines, M.E.1
  • 110
    • 22744447066 scopus 로고    scopus 로고
    • Molecular chacterization of sulfate-reducing bacteria in a New England salt marsh
    • Bahr, M. et al. Molecular chacterization of sulfate-reducing bacteria in a New England salt marsh. Environ. Microbiol. 7, 1175-1185 (2005).
    • (2005) Environ. Microbiol , vol.7 , pp. 1175-1185
    • Bahr, M.1
  • 111
    • 0342960381 scopus 로고    scopus 로고
    • Endosymbiontic sulphate-reducing and sulphide-oxidizing bacteria in an oligochaete worm
    • Dubilier, N. et al. Endosymbiontic sulphate-reducing and sulphide-oxidizing bacteria in an oligochaete worm. Nature 411 298-302 (2001).
    • (2001) Nature , vol.411 , pp. 298-302
    • Dubilier, N.1
  • 112
    • 33750431080 scopus 로고    scopus 로고
    • Symbiosis insights through metagenomic analysis of a microbial consortium
    • Woyke T. et al. Symbiosis insights through metagenomic analysis of a microbial consortium. Nature 443, 950-955 (2006).
    • (2006) Nature , vol.443 , pp. 950-955
    • Woyke, T.1
  • 113
    • 6544274735 scopus 로고    scopus 로고
    • Respiratory protection on offshore drilling rigs
    • Mattorano, D. A. & Merinar, T. Respiratory protection on offshore drilling rigs. Appl. Occup. Environ. Hyg. 14, 141-148 (1999).
    • (1999) Appl. Occup. Environ. Hyg , vol.14 , pp. 141-148
    • Mattorano, D.A.1    Merinar, T.2
  • 114
    • 34247581396 scopus 로고    scopus 로고
    • Effect of nitrate and nitrite on sulphide production by two thermophilic, sulphate-reducing enrichments from an oil field in the North Sea
    • Kaster, K. M., Grigoriyan, A., Jenneman, G. & Voordouw, G. Effect of nitrate and nitrite on sulphide production by two thermophilic, sulphate-reducing enrichments from an oil field in the North Sea. Appl. Microbiol. Biotechnol. 75, 195-203 (2007).
    • (2007) Appl. Microbiol. Biotechnol , vol.75 , pp. 195-203
    • Kaster, K.M.1    Grigoriyan, A.2    Jenneman, G.3    Voordouw, G.4
  • 115
    • 34247586220 scopus 로고    scopus 로고
    • Oil field souring control by nitrate-reducing Sulphurospirillum spp. that outcompete sulfate-reducing bacteria for organic electron donors
    • Hubert, C. & Voordouw, G. Oil field souring control by nitrate-reducing Sulphurospirillum spp. that outcompete sulfate-reducing bacteria for organic electron donors. Appl. Environ. Microbiol. 73, 2644-2652 (2007).
    • (2007) Appl. Environ. Microbiol , vol.73 , pp. 2644-2652
    • Hubert, C.1    Voordouw, G.2
  • 118
    • 0343209688 scopus 로고    scopus 로고
    • A biological process for the reclamation of flue gas desulfurization using mixed sulfate reducing bacteria with inexpensive carbon sources
    • Kaufmann, E. N., Little, M. H. & Selvaraj, P. T. A biological process for the reclamation of flue gas desulfurization using mixed sulfate reducing bacteria with inexpensive carbon sources. Appl. Biochem. Biotechnol. 63, 677-693 (1996).
    • (1996) Appl. Biochem. Biotechnol , vol.63 , pp. 677-693
    • Kaufmann, E.N.1    Little, M.H.2    Selvaraj, P.T.3
  • 119
    • 33847609980 scopus 로고    scopus 로고
    • Processes at the sediment water interface after addition of organic matter and lime to an Acid Mine Pit Lake mesocosm
    • Koschorreck, M. et al. Processes at the sediment water interface after addition of organic matter and lime to an Acid Mine Pit Lake mesocosm. Environ. Sci. Technol. 41, 1608-1614 (2007).
    • (2007) Environ. Sci. Technol , vol.41 , pp. 1608-1614
    • Koschorreck, M.1
  • 120
    • 31744443195 scopus 로고    scopus 로고
    • Occurrence of methanogenesis during the start-up of a full-scale synthesis gas-fed reactor treating sulphate and metal-rich wastewater
    • Van Houten, B. H. G. W. et al. Occurrence of methanogenesis during the start-up of a full-scale synthesis gas-fed reactor treating sulphate and metal-rich wastewater. Water Res. 40, 553-560 (2006).
    • (2006) Water Res , vol.40 , pp. 553-560
    • Van Houten, B.H.G.W.1
  • 121
    • 34250898625 scopus 로고    scopus 로고
    • Co-existence of physiologically similar sulphate-reducing bacteria in a full-scale sulfidogenic bioreactor fed with a single organic electron donor
    • Dar, S. A., Stams, A. J., Kuenen, J. G. & Muyzer, G. Co-existence of physiologically similar sulphate-reducing bacteria in a full-scale sulfidogenic bioreactor fed with a single organic electron donor. Appl. Microbiol. Biotechnol. 75, 1463-1472 (2007).
    • (2007) Appl. Microbiol. Biotechnol , vol.75 , pp. 1463-1472
    • Dar, S.A.1    Stams, A.J.2    Kuenen, J.G.3    Muyzer, G.4
  • 122
    • 63449105618 scopus 로고    scopus 로고
    • Desulfovibrio paquesii sp. nov., a hydrogenotrophic sulfate-reducing bacterium isolated from a full-scale synthesis gas fed bioreactor treating zinc and sulfate-rich wastewater
    • in the press
    • van Houten, B. H. G. W. et al. Desulfovibrio paquesii sp. nov., a hydrogenotrophic sulfate-reducing bacterium isolated from a full-scale synthesis gas fed bioreactor treating zinc and sulfate-rich wastewater. Int. J. Syst Evol. Microbiol. (in the press).
    • Int. J. Syst Evol. Microbiol
    • van Houten, B.H.G.W.1
  • 123
    • 0025700072 scopus 로고
    • Optimisation of sulphur production in a biotechnological sulphide-removing reactor
    • Buisman, C. J. N., Geraats, B. G., Ijspeert, P. & Lettinga, G. Optimisation of sulphur production in a biotechnological sulphide-removing reactor. Biotechnol. Bioeng. 35, 50-56 (1990).
    • (1990) Biotechnol. Bioeng , vol.35 , pp. 50-56
    • Buisman, C.J.N.1    Geraats, B.G.2    Ijspeert, P.3    Lettinga, G.4
  • 125
    • 34547190225 scopus 로고    scopus 로고
    • Microbial conversion of sulphur dioxide in flue gas to sulphide using bulk drug industry wastewater as an organic source by mixed cultures of sulphate reducing bacteria
    • Rao, A. G., Ravichandra, P., Joseph, J., Jetty, A. & Sarma, P. N. Microbial conversion of sulphur dioxide in flue gas to sulphide using bulk drug industry wastewater as an organic source by mixed cultures of sulphate reducing bacteria. J. Hazard Mater. 147, 718-725 (2007).
    • (2007) J. Hazard Mater , vol.147 , pp. 718-725
    • Rao, A.G.1    Ravichandra, P.2    Joseph, J.3    Jetty, A.4    Sarma, P.N.5
  • 126
    • 0034606961 scopus 로고    scopus 로고
    • Thermophilic sulphate reduction and methanogenesis with methanol in a high rate anaerobic reactor
    • Weijma, J., Stams, A. J. M., Hulshoff Pol, L. W. & Lettinga, G. Thermophilic sulphate reduction and methanogenesis with methanol in a high rate anaerobic reactor. Biotechnol. Bioeng. 67, 354-363 (2000).
    • (2000) Biotechnol. Bioeng , vol.67 , pp. 354-363
    • Weijma, J.1    Stams, A.J.M.2    Hulshoff Pol, L.W.3    Lettinga, G.4
  • 127
    • 36749063615 scopus 로고    scopus 로고
    • The micro-Petri dish. a million-well growth chip for the culture and high-throughput screening of microorganisms
    • Ingham, C. J. et al. The micro-Petri dish. a million-well growth chip for the culture and high-throughput screening of microorganisms. Proc. Natl Acad. Sci. USA 104, 18217-18222 (2007).
    • (2007) Proc. Natl Acad. Sci. USA , vol.104 , pp. 18217-18222
    • Ingham, C.J.1
  • 128
    • 31944434615 scopus 로고    scopus 로고
    • Linking microbial community structure with functions: Fluorescence in situ hybridization-microautoradiography and isotope arrays
    • Wagner, M., Nielsen, P. H., Loy, A., Nielsen. J. L. & Daims, H. Linking microbial community structure with functions: Fluorescence in situ hybridization-microautoradiography and isotope arrays. Curr. Opin. Biotechnol. 17, 83-91 (2006).
    • (2006) Curr. Opin. Biotechnol , vol.17 , pp. 83-91
    • Wagner, M.1    Nielsen, P.H.2    Loy, A.3    Nielsen, J.L.4    Daims, H.5
  • 129
    • 19144372182 scopus 로고    scopus 로고
    • Stable isotope probing - linking microbial identity to function
    • Dumont, M. G. & Murrell, J. C. Stable isotope probing - linking microbial identity to function. Nature Rev. Microbiol. 3, 499-504 (2005).
    • (2005) Nature Rev. Microbiol , vol.3 , pp. 499-504
    • Dumont, M.G.1    Murrell, J.C.2
  • 130
    • 38549118279 scopus 로고    scopus 로고
    • Simultaneous analysis of microbial identity and function using NanoSIMS
    • Li. T. et al. Simultaneous analysis of microbial identity and function using NanoSIMS. Environ. Microbiol. 10, 580-588 (2008).
    • (2008) Environ. Microbiol , vol.10 , pp. 580-588
    • Li, T.1
  • 131
    • 36349014923 scopus 로고    scopus 로고
    • mRNA-targeted fluorescent in situ hybridization (FISH) of Gram-negative bacteria without template amplification or tyramide signal amplification
    • Coleman, J. R., Culley, D. E., Chrisler. W. B. & Brockman, F. J. mRNA-targeted fluorescent in situ hybridization (FISH) of Gram-negative bacteria without template amplification or tyramide signal amplification. J. Microbial. Methods 71, 246-255 (2007).
    • (2007) J. Microbial. Methods , vol.71 , pp. 246-255
    • Coleman, J.R.1    Culley, D.E.2    Chrisler, W.B.3    Brockman, F.J.4
  • 132
    • 0031458333 scopus 로고    scopus 로고
    • The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus
    • Klenk, H.-P. et al. The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus. Nature 390, 364-370 (1997).
    • (1997) Nature , vol.390 , pp. 364-370
    • Klenk, H.-P.1
  • 133
    • 2342475768 scopus 로고    scopus 로고
    • The genome sequence of the anaerobic, sulphate-reducing bacterium Desulfovibrio vulgaris Hildenborough
    • Heidelberg, J. F. et al. The genome sequence of the anaerobic, sulphate-reducing bacterium Desulfovibrio vulgaris Hildenborough. Nature Biotechnol. 22, 554-559 (2004).
    • (2004) Nature Biotechnol , vol.22 , pp. 554-559
    • Heidelberg, J.F.1
  • 134
    • 4344713183 scopus 로고    scopus 로고
    • The genome of Desulfotalea psychrophila, a sulphate-reducing bacterium from permanently cold Arctic sediments
    • Rabus, R. et al. The genome of Desulfotalea psychrophila, a sulphate-reducing bacterium from permanently cold Arctic sediments. Environ. Microbiol. 6, 887-902 (2004).
    • (2004) Environ. Microbiol , vol.6 , pp. 887-902
    • Rabus, R.1
  • 135
    • 33744776637 scopus 로고    scopus 로고
    • Salt stress in Desulfovibrio vulgaris Hildenborough: An integrated genomics approach
    • Mukhopadhyay, A. et al. Salt stress in Desulfovibrio vulgaris Hildenborough: An integrated genomics approach. J. Bacteriol. 188, 4068-4078 (2006).
    • (2006) J. Bacteriol , vol.188 , pp. 4068-4078
    • Mukhopadhyay, A.1
  • 136
    • 27944473728 scopus 로고    scopus 로고
    • Response of the anaerobe Desulfovibrio vulgaris Hildenborough to oxidative conditions: Proteome and transcript analysis
    • Fournier, M. et al. Response of the anaerobe Desulfovibrio vulgaris Hildenborough to oxidative conditions: Proteome and transcript analysis. Biochimie 88, 85-94 (2006).
    • (2006) Biochimie , vol.88 , pp. 85-94
    • Fournier, M.1
  • 137
    • 33746332685 scopus 로고
    • Spirillum desulphuricans als Ursache von Sulfatreduktion.
    • Beijerinck, W. M. Über Spirillum desulphuricans als Ursache von Sulfatreduktion. Zentralb. Bakteriol. Parusitk. Infekt. Abt. 11 1, 49-59 (1895).
    • (1895) Zentralb. Bakteriol. Parusitk. Infekt. Abt , vol.11 , Issue.1 , pp. 49-59
    • Beijerinck, W.M.U.1
  • 138
    • 84986849820 scopus 로고
    • The sulphur cycle of a coastal marine sediment (Limfjorden, Denmark)
    • Jørgensen, B. B. The sulphur cycle of a coastal marine sediment (Limfjorden, Denmark). Limnol. Oceanogr. 22, 814-832 (1978).
    • (1978) Limnol. Oceanogr , vol.22 , pp. 814-832
    • Jørgensen, B.B.1
  • 140
    • 25444466886 scopus 로고    scopus 로고
    • Desulfovibrio aerotolerans sp. nov., an oxygen tolerant sulphate-reducing bacterium isolated from activated sludge
    • Mogensen, G. L., Kjeldsen, K. U. & Ingvorsen, K. Desulfovibrio aerotolerans sp. nov., an oxygen tolerant sulphate-reducing bacterium isolated from activated sludge. Anaerobe 11. 339-349 (2005).
    • (2005) Anaerobe , vol.11 , pp. 339-349
    • Mogensen, G.L.1    Kjeldsen, K.U.2    Ingvorsen, K.3
  • 141
    • 1842779212 scopus 로고    scopus 로고
    • Oxygen tolerance of sulphate-reducing bacteria in activated sludge
    • Kjeldsen, K. U., Joulian, C. & Ingvorsen, K. Oxygen tolerance of sulphate-reducing bacteria in activated sludge. Environ. Sci. Technol. 38, 2038-2043 (2004).
    • (2004) Environ. Sci. Technol , vol.38 , pp. 2038-2043
    • Kjeldsen, K.U.1    Joulian, C.2    Ingvorsen, K.3
  • 142
    • 0025168418 scopus 로고
    • Aerobic respiration in sulphate-reducing bacteria
    • Dilling, W. & Cypionka, H. Aerobic respiration in sulphate-reducing bacteria. Arch. Microbiol. 71, 123-128 (1990).
    • (1990) Arch. Microbiol , vol.71 , pp. 123-128
    • Dilling, W.1    Cypionka, H.2
  • 143
    • 0033760699 scopus 로고    scopus 로고
    • Transition from anaerobic to aerobic growth conditions for the sulfate-reducing bacterium Desulfovibrio axyclinae results in flocculation
    • Sigalevich, P., Meshorer, E., Helman, Y. & Cohen, Y. Transition from anaerobic to aerobic growth conditions for the sulfate-reducing bacterium Desulfovibrio axyclinae results in flocculation. Appl. Environ. Microbiol. 66, 5005-5012 (2000).
    • (2000) Appl. Environ. Microbiol , vol.66 , pp. 5005-5012
    • Sigalevich, P.1    Meshorer, E.2    Helman, Y.3    Cohen, Y.4
  • 145
    • 0020660776 scopus 로고
    • Sulfate reducers can outcompete methanogens at freshwater sulfate concentrations
    • Lovley, D. R. & Klug, M. J. Sulfate reducers can outcompete methanogens at freshwater sulfate concentrations. Appl. Environ. Microbiol. 45, 187-192 (1983).
    • (1983) Appl. Environ. Microbiol , vol.45 , pp. 187-192
    • Lovley, D.R.1    Klug, M.J.2
  • 146
    • 0021185196 scopus 로고
    • Kinetics of sulphate uptake by freshwater and marihe species of Desulfovibrio
    • Ingvorsen, K. & Jørgensen, B. B. Kinetics of sulphate uptake by freshwater and marihe species of Desulfovibrio. Arch. Microbiol. 139, 61-66 (1984).
    • (1984) Arch. Microbiol , vol.139 , pp. 61-66
    • Ingvorsen, K.1    Jørgensen, B.B.2
  • 147
    • 28844468912 scopus 로고    scopus 로고
    • Biofouling and biocorrosion in industrial water systems
    • Coetser, S. E. & Cloete, T. E. Biofouling and biocorrosion in industrial water systems. Crit. Rev. Microbiol. 31, 213-232 (2005).
    • (2005) Crit. Rev. Microbiol , vol.31 , pp. 213-232
    • Coetser, S.E.1    Cloete, T.E.2
  • 149
    • 37549027613 scopus 로고    scopus 로고
    • SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
    • Pruesse, E. et al. SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35, 7188-7196 (2007).
    • (2007) Nucleic Acids Res , vol.35 , pp. 7188-7196
    • Pruesse, E.1
  • 150
    • 2542523843 scopus 로고    scopus 로고
    • ARB: A software environment for sequence data
    • Ludwig, W. et al. ARB: A software environment for sequence data. Nucleic Acids Res. 32, 1363-1371 (2004).
    • (2004) Nucleic Acids Res , vol.32 , pp. 1363-1371
    • Ludwig, W.1
  • 151
    • 0017343370 scopus 로고
    • Energy conservation in chemotrophic anaerobic bacteria
    • Thauer, R. K., Jungermann, K. & Decker, K. Energy conservation in chemotrophic anaerobic bacteria. Bacteriol. Rev. 41, 100-180 (1977).
    • (1977) Bacteriol. Rev , vol.41 , pp. 100-180
    • Thauer, R.K.1    Jungermann, K.2    Decker, K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.