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Volumn 8, Issue 2, 2013, Pages

Pyrosequencing Dried Blood Spots Reveals Differences in HIV Drug Resistance between Treatment Naïve and Experienced Patients

Author keywords

[No Author keywords available]

Indexed keywords

ABACAVIR PLUS LAMIVUDINE; ANTIRETROVIRUS AGENT; ATAZANAVIR; DARUNAVIR; EMTRICITABINE PLUS TENOFOVIR DISOPROXIL; ETRAVIRINE; LOPINAVIR PLUS RITONAVIR; RITONAVIR;

EID: 84873585378     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0056170     Document Type: Article
Times cited : (14)

References (28)
  • 1
    • 17344390474 scopus 로고    scopus 로고
    • Antiretroviral drug resistance testing in adults with HIV infection: implications for clinical management. International AIDS Society-USA Panel
    • Hirsch MS, Conway B, D'Aquila RT, Johnson VA, Brun-Vezinet F, et al. (1998) Antiretroviral drug resistance testing in adults with HIV infection: implications for clinical management. International AIDS Society-USA Panel. JAMA 279: 1984-1991.
    • (1998) JAMA , vol.279 , pp. 1984-1991
    • Hirsch, M.S.1    Conway, B.2    D'Aquila, R.T.3    Johnson, V.A.4    Brun-Vezinet, F.5
  • 3
    • 78651085389 scopus 로고    scopus 로고
    • HIV type-1 drug resistance testing on dried blood spots is feasible and reliable in patients who fail antiretroviral therapy in rural Tanzania
    • Johannessen A, Holberg-Petersen M, Lovgaarden G, Naman E, Ormaasen V, et al. (2010) HIV type-1 drug resistance testing on dried blood spots is feasible and reliable in patients who fail antiretroviral therapy in rural Tanzania. Antivir Ther 15: 1003-1009.
    • (2010) Antivir Ther , vol.15 , pp. 1003-1009
    • Johannessen, A.1    Holberg-Petersen, M.2    Lovgaarden, G.3    Naman, E.4    Ormaasen, V.5
  • 4
    • 80052943349 scopus 로고    scopus 로고
    • Next-generation sequencing of dried blood spot specimens: a novel approach to HIV drug-resistance surveillance
    • Ji H, Li Y, Graham M, Liang BB, Pilon R, et al. (2011) Next-generation sequencing of dried blood spot specimens: a novel approach to HIV drug-resistance surveillance. Antivir Ther 16: 871-878.
    • (2011) Antivir Ther , vol.16 , pp. 871-878
    • Ji, H.1    Li, Y.2    Graham, M.3    Liang, B.B.4    Pilon, R.5
  • 6
    • 57149143564 scopus 로고    scopus 로고
    • Evolution of proviral gp120 over the first year of HIV-1 subtype C infection
    • Novitsky V, Lagakos S, Herzig M, Bonney C, Kebaabetswe L, et al. (2009) Evolution of proviral gp120 over the first year of HIV-1 subtype C infection. Virology 383: 47-59.
    • (2009) Virology , vol.383 , pp. 47-59
    • Novitsky, V.1    Lagakos, S.2    Herzig, M.3    Bonney, C.4    Kebaabetswe, L.5
  • 7
    • 79960569795 scopus 로고    scopus 로고
    • Majority of CD4+ T cells from peripheral blood of HIV-1-infected individuals contain only one HIV DNA molecule
    • Josefsson L, King MS, Makitalo B, Brannstrom J, Shao W, et al. (2011) Majority of CD4+ T cells from peripheral blood of HIV-1-infected individuals contain only one HIV DNA molecule. Proc Natl Acad Sci U S A 108: 11199-11204.
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 11199-11204
    • Josefsson, L.1    King, M.S.2    Makitalo, B.3    Brannstrom, J.4    Shao, W.5
  • 8
    • 0042415227 scopus 로고    scopus 로고
    • Emergence of protease inhibitor resistance-associated mutations in plasma HIV-1 precedes that in proviruses of peripheral blood mononuclear cells by more than a year
    • Bi X, Gatanaga H, Ida S, Tsuchiya K, Matsuoka-Aizawa S, et al. (2003) Emergence of protease inhibitor resistance-associated mutations in plasma HIV-1 precedes that in proviruses of peripheral blood mononuclear cells by more than a year. J Acquir Immune Defic Syndr 34: 1-6.
    • (2003) J Acquir Immune Defic Syndr , vol.34 , pp. 1-6
    • Bi, X.1    Gatanaga, H.2    Ida, S.3    Tsuchiya, K.4    Matsuoka-Aizawa, S.5
  • 9
    • 36348939264 scopus 로고    scopus 로고
    • High concordance between HIV-1 drug resistance genotypes generated from plasma and dried blood spots in antiretroviral-experienced patients
    • Masciotra S, Garrido C, Youngpairoj AS, McNulty A, Zahonero N, et al. (2007) High concordance between HIV-1 drug resistance genotypes generated from plasma and dried blood spots in antiretroviral-experienced patients. AIDS 21: 2503-2511.
    • (2007) AIDS , vol.21 , pp. 2503-2511
    • Masciotra, S.1    Garrido, C.2    Youngpairoj, A.S.3    McNulty, A.4    Zahonero, N.5
  • 10
    • 40849092475 scopus 로고    scopus 로고
    • Evaluation of dried blood spot specimens for HIV-1 drug-resistance testing using the Trugene((R)) HIV-1 genotyping assay
    • Hallack R, Doherty LE, Wethers JA, Parker MM, (2008) Evaluation of dried blood spot specimens for HIV-1 drug-resistance testing using the Trugene((R)) HIV-1 genotyping assay. J Clin Virol 41: 283-287.
    • (2008) J Clin Virol , vol.41 , pp. 283-287
    • Hallack, R.1    Doherty, L.E.2    Wethers, J.A.3    Parker, M.M.4
  • 11
    • 33745881010 scopus 로고    scopus 로고
    • A sensitive genotyping assay for detection of drug resistance mutations in reverse transcriptase of HIV-1 subtypes B and C in samples stored as dried blood spots or frozen RNA extracts
    • Ziemniak C, George-Agwu A, Moss WJ, Ray SC, Persaud D, (2006) A sensitive genotyping assay for detection of drug resistance mutations in reverse transcriptase of HIV-1 subtypes B and C in samples stored as dried blood spots or frozen RNA extracts. J Virol Methods 136: 238-247.
    • (2006) J Virol Methods , vol.136 , pp. 238-247
    • Ziemniak, C.1    George-Agwu, A.2    Moss, W.J.3    Ray, S.C.4    Persaud, D.5
  • 12
    • 0028091742 scopus 로고
    • Detection of drug resistance mutations in the human immunodeficiency virus type 1 (HIV-1) pol gene: differences in semen and blood HIV-1 RNA and proviral DNA
    • Kroodsma KL, Kozal MJ, Hamed KA, Winters MA, Merigan TC, (1994) Detection of drug resistance mutations in the human immunodeficiency virus type 1 (HIV-1) pol gene: differences in semen and blood HIV-1 RNA and proviral DNA. J Infect Dis 170: 1292-1295.
    • (1994) J Infect Dis , vol.170 , pp. 1292-1295
    • Kroodsma, K.L.1    Kozal, M.J.2    Hamed, K.A.3    Winters, M.A.4    Merigan, T.C.5
  • 13
    • 35348926348 scopus 로고    scopus 로고
    • Feasibility of detecting human immunodeficiency virus type 1 drug resistance in DNA extracted from whole blood or dried blood spots
    • Steegen K, Luchters S, Demecheleer E, Dauwe K, Mandaliya K, et al. (2007) Feasibility of detecting human immunodeficiency virus type 1 drug resistance in DNA extracted from whole blood or dried blood spots. J Clin Microbiol 45: 3342-3351.
    • (2007) J Clin Microbiol , vol.45 , pp. 3342-3351
    • Steegen, K.1    Luchters, S.2    Demecheleer, E.3    Dauwe, K.4    Mandaliya, K.5
  • 14
    • 34249914816 scopus 로고    scopus 로고
    • Use of peripheral blood DNA for genotype antiretroviral resistance testing in drug-naive HIV-infected subjects
    • Vicenti I, Razzolini F, Saladini F, Romano L, Zazzi M, (2007) Use of peripheral blood DNA for genotype antiretroviral resistance testing in drug-naive HIV-infected subjects. Clin Infect Dis 44: 1657-1661.
    • (2007) Clin Infect Dis , vol.44 , pp. 1657-1661
    • Vicenti, I.1    Razzolini, F.2    Saladini, F.3    Romano, L.4    Zazzi, M.5
  • 15
    • 50849143192 scopus 로고    scopus 로고
    • Antiretroviral genotypic resistance in plasma RNA and whole blood DNA in HIV-1 infected patients failing HAART
    • Saracino A, Gianotti N, Marangi M, Cibelli DC, Galli A, et al. (2008) Antiretroviral genotypic resistance in plasma RNA and whole blood DNA in HIV-1 infected patients failing HAART. J Med Virol 80: 1695-1706.
    • (2008) J Med Virol , vol.80 , pp. 1695-1706
    • Saracino, A.1    Gianotti, N.2    Marangi, M.3    Cibelli, D.C.4    Galli, A.5
  • 16
    • 77949508899 scopus 로고    scopus 로고
    • HIV drug resistance surveillance using pooled pyrosequencing
    • Ji H, Masse N, Tyler S, Liang B, Li Y, et al. (2010) HIV drug resistance surveillance using pooled pyrosequencing. PLoS ONE 5: e9263.
    • (2010) PLoS ONE , vol.5
    • Ji, H.1    Masse, N.2    Tyler, S.3    Liang, B.4    Li, Y.5
  • 20
    • 79955705373 scopus 로고    scopus 로고
    • Dried blood spots for HIV-1 drug resistance and viral load testing: A review of current knowledge and WHO efforts for global HIV drug resistance surveillance
    • Bertagnolio S, Parkin NT, Jordan M, Brooks J, Garcia-Lerma JG, (2010) Dried blood spots for HIV-1 drug resistance and viral load testing: A review of current knowledge and WHO efforts for global HIV drug resistance surveillance. AIDS Rev 12: 195-208.
    • (2010) AIDS Rev , vol.12 , pp. 195-208
    • Bertagnolio, S.1    Parkin, N.T.2    Jordan, M.3    Brooks, J.4    Garcia-Lerma, J.G.5
  • 21
    • 84859034045 scopus 로고    scopus 로고
    • Dried blood spot specimens are a suitable alternative sample type for HIV-1 viral load measurement and drug resistance genotyping in patients receiving first-line antiretroviral therapy
    • Rottinghaus EK, Ugbena R, Diallo K, Bassey O, Azeez A, et al. (2012) Dried blood spot specimens are a suitable alternative sample type for HIV-1 viral load measurement and drug resistance genotyping in patients receiving first-line antiretroviral therapy. Clin Infect Dis 54: 1187-1195.
    • (2012) Clin Infect Dis , vol.54 , pp. 1187-1195
    • Rottinghaus, E.K.1    Ugbena, R.2    Diallo, K.3    Bassey, O.4    Azeez, A.5
  • 22
    • 65249136428 scopus 로고    scopus 로고
    • Evaluation of different RNA extraction methods and storage conditions of dried plasma or blood spots for human immunodeficiency virus type 1 RNA quantification and PCR amplification for drug resistance testing
    • Monleau M, Montavon C, Laurent C, Segondy M, Montes B, et al. (2009) Evaluation of different RNA extraction methods and storage conditions of dried plasma or blood spots for human immunodeficiency virus type 1 RNA quantification and PCR amplification for drug resistance testing. J Clin Microbiol 47: 1107-1118.
    • (2009) J Clin Microbiol , vol.47 , pp. 1107-1118
    • Monleau, M.1    Montavon, C.2    Laurent, C.3    Segondy, M.4    Montes, B.5
  • 23
    • 77954755249 scopus 로고    scopus 로고
    • Effect of storage conditions of dried plasma and blood spots on HIV-1 RNA quantification and PCR amplification for drug resistance genotyping
    • Monleau M, Butel C, Delaporte E, Boillot F, Peeters M, (2010) Effect of storage conditions of dried plasma and blood spots on HIV-1 RNA quantification and PCR amplification for drug resistance genotyping. J Antimicrob Chemother 65: 1562-1566.
    • (2010) J Antimicrob Chemother , vol.65 , pp. 1562-1566
    • Monleau, M.1    Butel, C.2    Delaporte, E.3    Boillot, F.4    Peeters, M.5
  • 24
    • 35348926348 scopus 로고    scopus 로고
    • Feasibility of detecting human immunodeficiency virus type 1 drug resistance in DNA extracted from whole blood or dried blood spots
    • Steegen K, Luchters S, Demecheleer E, Dauwe K, Mandaliya K, et al. (2007) Feasibility of detecting human immunodeficiency virus type 1 drug resistance in DNA extracted from whole blood or dried blood spots. J Clin Microbiol 45: 3342-3351.
    • (2007) J Clin Microbiol , vol.45 , pp. 3342-3351
    • Steegen, K.1    Luchters, S.2    Demecheleer, E.3    Dauwe, K.4    Mandaliya, K.5
  • 25
    • 33847071584 scopus 로고    scopus 로고
    • Evaluation of dried blood spots for human immunodeficiency virus type 1 drug resistance testing
    • McNulty A, Jennings C, Bennett D, Fitzgibbon J, Bremer JW, et al. (2007) Evaluation of dried blood spots for human immunodeficiency virus type 1 drug resistance testing. J Clin Microbiol 45: 517-521.
    • (2007) J Clin Microbiol , vol.45 , pp. 517-521
    • McNulty, A.1    Jennings, C.2    Bennett, D.3    Fitzgibbon, J.4    Bremer, J.W.5
  • 26
    • 0036340605 scopus 로고    scopus 로고
    • Molecular characterization of preintegration latency in human immunodeficiency virus type 1 infection
    • Pierson TC, Zhou Y, Kieffer TL, Ruff CT, Buck C, et al. (2002) Molecular characterization of preintegration latency in human immunodeficiency virus type 1 infection. J Virol 76: 8518-8531.
    • (2002) J Virol , vol.76 , pp. 8518-8531
    • Pierson, T.C.1    Zhou, Y.2    Kieffer, T.L.3    Ruff, C.T.4    Buck, C.5
  • 27
    • 36348939264 scopus 로고    scopus 로고
    • High concordance between HIV-1 drug resistance genotypes generated from plasma and dried blood spots in antiretroviral-experienced patients
    • Masciotra S, Garrido C, Youngpairoj AS, McNulty A, Zahonero N, et al. (2007) High concordance between HIV-1 drug resistance genotypes generated from plasma and dried blood spots in antiretroviral-experienced patients. AIDS 21: 2503-2511.
    • (2007) AIDS , vol.21 , pp. 2503-2511
    • Masciotra, S.1    Garrido, C.2    Youngpairoj, A.S.3    McNulty, A.4    Zahonero, N.5
  • 28
    • 78951479088 scopus 로고    scopus 로고
    • Minority HIV mutation detection in dried blood spots indicates high specimen integrity and reveals hidden archived drug resistance
    • Wei X, Youngpairoj AS, Garrido C, Zahonero N, Corral A, et al. (2011) Minority HIV mutation detection in dried blood spots indicates high specimen integrity and reveals hidden archived drug resistance. J Clin Virol 50: 148-152.
    • (2011) J Clin Virol , vol.50 , pp. 148-152
    • Wei, X.1    Youngpairoj, A.S.2    Garrido, C.3    Zahonero, N.4    Corral, A.5


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