-
1
-
-
77953808473
-
Next-generation genomics: An integrative approach
-
Hawkins RD, Hon GC, Ren B. 2010. Next-generation genomics: an integrative approach. Nat. Rev. Genet. 11:476-486.
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 476-486
-
-
Hawkins, R.D.1
Hon, G.C.2
Ren, B.3
-
2
-
-
80053493512
-
New resources for functional analysis of omics data for the genus Aspergillus
-
doi:10.1186/1471-2164-12-486
-
Nitsche BM, Crabtree J, Cerqueira GC, Meyer V, Ram AFJ, Wortman JR. 2011. New resources for functional analysis of omics data for the genus Aspergillus. BMC Genomics 12:486. doi:10.1186/1471-2164-12-486.
-
(2011)
BMC Genomics
, vol.12
, pp. 486
-
-
Nitsche, B.M.1
Crabtree, J.2
Cerqueira, G.C.3
Meyer, V.4
Ram, A.F.J.5
Wortman, J.R.6
-
3
-
-
79960386266
-
Proteomics of eukaryotic microorganisms: The medically and biotechnologically important fungal genus Aspergillus
-
Kniemeyer O. 2011. Proteomics of eukaryotic microorganisms: the medically and biotechnologically important fungal genus Aspergillus. Proteomics 11:3232-3243.
-
(2011)
Proteomics
, vol.11
, pp. 3232-3243
-
-
Kniemeyer, O.1
-
4
-
-
78650034750
-
Comparison of transcriptional and translational changes caused by long-term menadione exposure in Aspergillus nidulans
-
Pusztahelyi T, Klement E, Szajli E, Klem J, Miskei M, Karányi Z, Emri T, Kovács S, Orosz G, Kovács KL, Medzihradszky KF, Prade RA, Pócsi I. 2011. Comparison of transcriptional and translational changes caused by long-term menadione exposure in Aspergillus nidulans. Fungal Genet. Biol. 48:92-103.
-
(2011)
Fungal Genet. Biol.
, vol.48
, pp. 92-103
-
-
Pusztahelyi, T.1
Klement, E.2
Szajli, E.3
Klem, J.4
Miskei, M.5
Karányi, Z.6
Emri, T.7
Kovács, S.8
Orosz, G.9
Kovács, K.L.10
Medzihradszky, K.F.11
Prade, R.A.12
Pócsi, I.13
-
5
-
-
80051496769
-
Regulation of conidiation by light in Aspergillus nidulans
-
Ruger-Herreros C, Rodriguez-Romero J, Fernandez-Barranco R, Olmedo M, Fischer R, Corrochano LM, Canovas D. 2011. Regulation of conidiation by light in Aspergillus nidulans. Genetics 188:809-822.
-
(2011)
Genetics
, vol.188
, pp. 809-822
-
-
Ruger-Herreros, C.1
Rodriguez-Romero, J.2
Fernandez-Barranco, R.3
Olmedo, M.4
Fischer, R.5
Corrochano, L.M.6
Canovas, D.7
-
6
-
-
78449259379
-
Identification and characterization of genes responsible for biosynthesis of kojic acid, an industrially important compound from Aspergillus oryzae
-
Terabayashi Y, Sano M, Yamane N, Marui J, Tamano K, Sagara J, Dohmoto M, Oda K, Ohshima E, Tachibana K, Higa Y, Ohashi S, Koike H, Machida M. 2010. Identification and characterization of genes responsible for biosynthesis of kojic acid, an industrially important compound from Aspergillus oryzae. Fungal Genet. Biol. 47:953-961.
-
(2010)
Fungal Genet. Biol.
, vol.47
, pp. 953-961
-
-
Terabayashi, Y.1
Sano, M.2
Yamane, N.3
Marui, J.4
Tamano, K.5
Sagara, J.6
Dohmoto, M.7
Oda, K.8
Ohshima, E.9
Tachibana, K.10
Higa, Y.11
Ohashi, S.12
Koike, H.13
Machida, M.14
-
7
-
-
58149343558
-
Transcriptional profiling identifies a role for BrlA in the response to nitrogen depletion and for StuA in the regulation of secondary metabolite clusters in Aspergillus fumigatus
-
Twumasi-Boateng K, Yu Y, Chen D, Gravelat FN, Nierman WC, Sheppard DC. 2009. Transcriptional profiling identifies a role for BrlA in the response to nitrogen depletion and for StuA in the regulation of secondary metabolite clusters in Aspergillus fumigatus. Eukaryot. Cell 8:104-115.
-
(2009)
Eukaryot. Cell
, vol.8
, pp. 104-115
-
-
Twumasi-Boateng, K.1
Yu, Y.2
Chen, D.3
Gravelat, F.N.4
Nierman, W.C.5
Sheppard, D.C.6
-
8
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNA-Seq
-
Mortazavi A, Williams BA, McCue K, Schaeffer L, Wold B. 2008. Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat. Methods 5:621-628.
-
(2008)
Nat. Methods
, vol.5
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
9
-
-
46249130709
-
The beginning of the end for microarrays?
-
Shendure J. 2008. The beginning of the end for microarrays? Nat. Methods 5:585-587.
-
(2008)
Nat. Methods
, vol.5
, pp. 585-587
-
-
Shendure, J.1
-
10
-
-
57749195712
-
RNA-Seq: A revolutionary tool for transcriptomics
-
Wang Z, Gerstein M, Snyder M. 2009. RNA-Seq: a revolutionary tool for transcriptomics. Nat. Rev. Genet. 10:57-63.
-
(2009)
Nat. Rev. Genet.
, vol.10
, pp. 57-63
-
-
Wang, Z.1
Gerstein, M.2
Snyder, M.3
-
11
-
-
77956107299
-
Survey of the transcriptome of Aspergillus oryzae via massively parallel mRNA sequencing
-
Wang B, Guo G, Wang C, Lin Y, Wang X, Zhao M, Guo Y, He M, Zhang Y, Pan L. 2010. Survey of the transcriptome of Aspergillus oryzae via massively parallel mRNA sequencing. Nucleic Acids Res. 38:5075-5087.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 5075-5087
-
-
Wang, B.1
Guo, G.2
Wang, C.3
Lin, Y.4
Wang, X.5
Zhao, M.6
Guo, Y.7
He, M.8
Zhang, Y.9
Pan, L.10
-
12
-
-
84866145069
-
Uncovering the genome-wide transcriptional responses of the filamentous fungus Aspergillus niger to lignocellulose using RNA sequencing
-
doi:10.1371/journal.pgen.1002875
-
Delmas S, Pullan ST, Gaddipati S, Kokolski M, Malla S, Blythe MJ, Ibbett R, Campbell M, Liddell S, Aboobaker A, Tucker GA, Archer DB. 2012. Uncovering the genome-wide transcriptional responses of the filamentous fungus Aspergillus niger to lignocellulose using RNA sequencing. PLoS Genet. 8:e1002875. doi:10.1371/journal.pgen.1002875.
-
(2012)
PLoS Genet.
, vol.8
-
-
Delmas, S.1
Pullan, S.T.2
Gaddipati, S.3
Kokolski, M.4
Malla, S.5
Blythe, M.J.6
Ibbett, R.7
Campbell, M.8
Liddell, S.9
Aboobaker, A.10
Tucker, G.A.11
Archer, D.B.12
-
13
-
-
80054093382
-
Global transcriptome changes underlying colony growth in the opportunistic human pathogen Aspergillus fumigatus
-
Gibbons JG, Beauvais A, Beau R, McGary KL, Latge JP, Rokas A. 2012. Global transcriptome changes underlying colony growth in the opportunistic human pathogen Aspergillus fumigatus. Eukaryot. Cell 11:68-78.
-
(2012)
Eukaryot. Cell
, vol.11
, pp. 68-78
-
-
Gibbons, J.G.1
Beauvais, A.2
Beau, R.3
McGary, K.L.4
Latge, J.P.5
Rokas, A.6
-
14
-
-
84864599461
-
The evolutionary imprint of domestication on genome variation and function of the filamentous fungus Aspergillus oryzae
-
Gibbons JG, Salichos L, Slot JC, Rinker DC, McGary KL, King JG, Klich MA, Tabb DL, McDonald WH, Rokas A. 2012. The evolutionary imprint of domestication on genome variation and function of the filamentous fungus Aspergillus oryzae. Curr. Biol. 22:1403-1409.
-
(2012)
Curr. Biol.
, vol.22
, pp. 1403-1409
-
-
Gibbons, J.G.1
Salichos, L.2
Slot, J.C.3
Rinker, D.C.4
McGary, K.L.5
King, J.G.6
Klich, M.A.7
Tabb, D.L.8
McDonald, W.H.9
Rokas, A.10
-
15
-
-
80051663373
-
Tight control of mycotoxin biosynthesis gene expression in Aspergillus flavus by temperature as revealed by RNA-Seq
-
Yu J, Fedorova ND, Montalbano BG, Bhatnagar D, Cleveland TE, Bennett JW, Nierman WC. 2011. Tight control of mycotoxin biosynthesis gene expression in Aspergillus flavus by temperature as revealed by RNA-Seq. FEMS Microbiol. Lett. 322:145-149.
-
(2011)
FEMS Microbiol. Lett.
, vol.322
, pp. 145-149
-
-
Yu, J.1
Fedorova, N.D.2
Montalbano, B.G.3
Bhatnagar, D.4
Cleveland, T.E.5
Bennett, J.W.6
Nierman, W.C.7
-
17
-
-
78649335073
-
Aspergillus nidulans asexual development: Making the most of cellular modules
-
Etxebeste O, Garzia A, Espeso EA, Ugalde U. 2010. Aspergillus nidulans asexual development: making the most of cellular modules. Trends Microbiol. 18:569-576.
-
(2010)
Trends Microbiol.
, vol.18
, pp. 569-576
-
-
Etxebeste, O.1
Garzia, A.2
Espeso, E.A.3
Ugalde, U.4
-
18
-
-
79951744090
-
Adaptative and developmental responses to stress in Aspergillus nidulans
-
Etxebeste O, Ugalde U, Espeso EA. 2010. Adaptative and developmental responses to stress in Aspergillus nidulans. Curr. Protein Pept. Sci. 11:704-718.
-
(2010)
Curr. Protein Pept. Sci.
, vol.11
, pp. 704-718
-
-
Etxebeste, O.1
Ugalde, U.2
Espeso, E.A.3
-
19
-
-
77953230177
-
-
ASM Press, Washington, DC
-
Ni M, Gao N, Kwon N-J, Shin K-S, Yu JH. 2010. Regulation of Aspergillus conidiation in cellular and molecular biology of filamentous fungi. ASM Press, Washington, DC.
-
(2010)
Regulation of Aspergillus conidiation in cellular and molecular biology of filamentous fungi
-
-
Ni, M.1
Gao, N.2
Kwon, N.-J.3
Shin, K.-S.4
Yu, J.H.5
-
20
-
-
0001081374
-
Ultrastructural analysis of conidiophore development in the fungus Aspergillus nidulans using freeze-substitution
-
Mims CW, Richardson E, Timberlake WE. 1988. Ultrastructural analysis of conidiophore development in the fungus Aspergillus nidulans using freeze-substitution. Protoplasma 144:132-141.
-
(1988)
Protoplasma
, vol.144
, pp. 132-141
-
-
Mims, C.W.1
Richardson, E.2
Timberlake, W.E.3
-
21
-
-
84857696505
-
The septin AspB in Aspergillus nidulans forms bars and filaments and plays roles in growth emergence and conidiation
-
Hernández-Rodríguez Y, Hastings S, Momany M. 2012. The septin AspB in Aspergillus nidulans forms bars and filaments and plays roles in growth emergence and conidiation. Eukaryot. Cell 11:311-323.
-
(2012)
Eukaryot. Cell
, vol.11
, pp. 311-323
-
-
Hernández-Rodríguez, Y.1
Hastings, S.2
Momany, M.3
-
22
-
-
84863572097
-
Morphogenetic and developmental functions of the Aspergillus nidulans homologues of the yeast bud site selection proteins Bud4 and Axl2
-
Si H, Rittenour WR, Xu K, Nicksarlian M, Calvo AM, Harris SD. 2012. Morphogenetic and developmental functions of the Aspergillus nidulans homologues of the yeast bud site selection proteins Bud4 and Axl2. Mol. Microbiol. 85:252-270.
-
(2012)
Mol. Microbiol.
, vol.85
, pp. 252-270
-
-
Si, H.1
Rittenour, W.R.2
Xu, K.3
Nicksarlian, M.4
Calvo, A.M.5
Harris, S.D.6
-
23
-
-
0028152825
-
Genetic requirements for initiating asexual development in Aspergillus nidulans
-
Wieser JK, Lee BN, Fondon JW, III, Adams TH. 1994. Genetic requirements for initiating asexual development in Aspergillus nidulans. Curr. Genet. 27:62-69.
-
(1994)
Curr. Genet.
, vol.27
, pp. 62-69
-
-
Wieser, J.K.1
Lee, B.N.2
Fondon III, J.W.3
Adams, T.H.4
-
24
-
-
0024299512
-
brlA is necessary and sufficient to direct conidiophore development in Aspergillus nidulans
-
Adams TH, Boylan MT, Timberlake WE. 1988. brlA is necessary and sufficient to direct conidiophore development in Aspergillus nidulans. Cell 54:353-362.
-
(1988)
Cell
, vol.54
, pp. 353-362
-
-
Adams, T.H.1
Boylan, M.T.2
Timberlake, W.E.3
-
25
-
-
0028278743
-
The Aspergillus nidulans abaA gene encodes a transcriptional activator that acts as a genetic switch to control development
-
Andrianopoulos A, Timberlake WE. 1994. The Aspergillus nidulans abaA gene encodes a transcriptional activator that acts as a genetic switch to control development. Mol. Cell. Biol. 14:2503-2515.
-
(1994)
Mol. Cell. Biol.
, vol.14
, pp. 2503-2515
-
-
Andrianopoulos, A.1
Timberlake, W.E.2
-
26
-
-
0026077954
-
Aspergillus nidulans wetA activates spore-specific gene expression
-
Marshall MA, Timberlake WE. 1991. Aspergillus nidulans wetA activates spore-specific gene expression. Mol. Cell. Biol. 11:55-62.
-
(1991)
Mol. Cell. Biol.
, vol.11
, pp. 55-62
-
-
Marshall, M.A.1
Timberlake, W.E.2
-
27
-
-
58149116712
-
Aspergillus nidulans FlbE is an upstream developmental activator of conidiation functionally associated with the putative transcription factor FlbB
-
Garzia A, Etxebeste O, Herrero-García E, Fischer R, Espeso EA, Ugalde U. 2009. Aspergillus nidulans FlbE is an upstream developmental activator of conidiation functionally associated with the putative transcription factor FlbB. Mol. Microbiol. 71:172-184.
-
(2009)
Mol. Microbiol.
, vol.71
, pp. 172-184
-
-
Garzia, A.1
Etxebeste, O.2
Herrero-García, E.3
Fischer, R.4
Espeso, E.A.5
Ugalde, U.6
-
28
-
-
77349085588
-
The concerted action of bZip and cMyb transcription factors FlbB and FlbD induces brlA expression and asexual development in Aspergillus nidulans
-
Garzia A, Etxebeste O, Herrero-García E, Ugalde U, Espeso EA. 2010. The concerted action of bZip and cMyb transcription factors FlbB and FlbD induces brlA expression and asexual development in Aspergillus nidulans. Mol. Microbiol. 75:1314-1324.
-
(2010)
Mol. Microbiol.
, vol.75
, pp. 1314-1324
-
-
Garzia, A.1
Etxebeste, O.2
Herrero-García, E.3
Ugalde, U.4
Espeso, E.A.5
-
29
-
-
33645223703
-
A versatile and efficient gene-targeting system for Aspergillus nidulans
-
Nayak T, Szewczyk E, Oakley CE, Osmani A, Ukil L, Murray SL, Hynes MJ, Osmani SA, Oakley BR. 2006. A versatile and efficient gene-targeting system for Aspergillus nidulans. Genetics 172:1557-1566.
-
(2006)
Genetics
, vol.172
, pp. 1557-1566
-
-
Nayak, T.1
Szewczyk, E.2
Oakley, C.E.3
Osmani, A.4
Ukil, L.5
Murray, S.L.6
Hynes, M.J.7
Osmani, S.A.8
Oakley, B.R.9
-
30
-
-
49249124795
-
The genetics of Aspergillus nidulans
-
Pontecorvo G, Roper JA, Chemmons LM, Macdonald KD, Bufton AWJ. 1953. The genetics of Aspergillus nidulans. Adv. Genet. 5:141-238.
-
(1953)
Adv. Genet.
, vol.5
, pp. 141-238
-
-
Pontecorvo, G.1
Roper, J.A.2
Chemmons, L.M.3
Macdonald, K.D.4
Bufton, A.W.J.5
-
31
-
-
0027262430
-
Spatial and temporal controls of the Aspergillus brIA developmental regulatory gene
-
Aguirre J. 1993. Spatial and temporal controls of the Aspergillus brIA developmental regulatory gene. Mol. Microbiol. 8:211-218.
-
(1993)
Mol. Microbiol.
, vol.8
, pp. 211-218
-
-
Aguirre, J.1
-
32
-
-
40649120761
-
Basic-zipper-type transcription factor FlbB controls asexual development in Aspergillus nidulans
-
Etxebeste O, Ni M, Garzia A, Kwon N-J, Fischer R, Yu J-H, Espeso EA, Ugalde U. 2008. Basic-zipper-type transcription factor FlbB controls asexual development in Aspergillus nidulans. Eukaryot. Cell 7:38-48.
-
(2008)
Eukaryot. Cell
, vol.7
, pp. 38-48
-
-
Etxebeste, O.1
Ni, M.2
Garzia, A.3
Kwon, N.-J.4
Fischer, R.5
Yu, J.-H.6
Espeso, E.A.7
Ugalde, U.8
-
33
-
-
84859885816
-
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
-
Trapnell C, Roberts A, Goff L, Pertea G, Kim D, Kelley DR, Pimentel H, Salzberg SL, Rinn JL, Pachter L. 2012. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nat. Protoc. 7:562-578.
-
(2012)
Nat. Protoc.
, vol.7
, pp. 562-578
-
-
Trapnell, C.1
Roberts, A.2
Goff, L.3
Pertea, G.4
Kim, D.5
Kelley, D.R.6
Pimentel, H.7
Salzberg, S.L.8
Rinn, J.L.9
Pachter, L.10
-
34
-
-
0015170289
-
A quantitative survey of conidiation mutants in Aspergillus nidulans
-
Martinelli SD, Clutterbuck AJ. 1971. A quantitative survey of conidiation mutants in Aspergillus nidulans. J. Gen. Microbiol. 69:261-268.
-
(1971)
J. Gen. Microbiol.
, vol.69
, pp. 261-268
-
-
Martinelli, S.D.1
Clutterbuck, A.J.2
-
35
-
-
0018932243
-
Developmental gene regulation in Aspergillus nidulans
-
Timberlake WE. 1980. Developmental gene regulation in Aspergillus nidulans. Dev. Biol. 78:497-510.
-
(1980)
Dev. Biol.
, vol.78
, pp. 497-510
-
-
Timberlake, W.E.1
-
36
-
-
0018963281
-
Molecular cloning and selection of genes regulated in Aspergillus development
-
Zimmermann CR, Orr WC, Leclerc RF, Barnard EC, Timberlake WE. 1980. Molecular cloning and selection of genes regulated in Aspergillus development. Cell 21:709-715.
-
(1980)
Cell
, vol.21
, pp. 709-715
-
-
Zimmermann, C.R.1
Orr, W.C.2
Leclerc, R.F.3
Barnard, E.C.4
Timberlake, W.E.5
-
37
-
-
0031664345
-
Mutational analysis of AREA, a transcriptional activator mediating nitrogen metabolite repression in Aspergillus nidulans and a member of the "streetwise" GATA family of transcription factors
-
Wilson RA, Arst HN. 1998. Mutational analysis of AREA, a transcriptional activator mediating nitrogen metabolite repression in Aspergillus nidulans and a member of the "streetwise" GATA family of transcription factors. Microbiol. Mol. Biol. Rev. 62:586-596.
-
(1998)
Microbiol. Mol. Biol. Rev.
, vol.62
, pp. 586-596
-
-
Wilson, R.A.1
Arst, H.N.2
-
38
-
-
34748923601
-
Transcriptional control of nmrA by the bZIP transcription factor MeaB reveals a new level of nitrogen regulation in Aspergillus nidulans
-
Wong KH, Hynes MJ, Todd RB, Davis MA. 2007. Transcriptional control of nmrA by the bZIP transcription factor MeaB reveals a new level of nitrogen regulation in Aspergillus nidulans. Mol. Microbiol. 66:534-551.
-
(2007)
Mol. Microbiol.
, vol.66
, pp. 534-551
-
-
Wong, K.H.1
Hynes, M.J.2
Todd, R.B.3
Davis, M.A.4
-
39
-
-
0025944347
-
Analysis of the creA gene, a regulatory of carbon catabolite repression in Aspergillus nidulans
-
Dowzer CEA, Kelly JM. 1991. Analysis of the creA gene, a regulatory of carbon catabolite repression in Aspergillus nidulans. Mol. Cell. Biol. 11: 5701-5709.
-
(1991)
Mol. Cell. Biol.
, vol.11
, pp. 5701-5709
-
-
Dowzer, C.E.A.1
Kelly, J.M.2
-
40
-
-
0035172067
-
Transcriptional autoregulation and inhibition of mRNA translation of amino acid regulator gene cpcA of filamentous fungus Aspergillus nidulans
-
Hoffmann B, Valerius O, Andermann M, Braus GH. 2001. Transcriptional autoregulation and inhibition of mRNA translation of amino acid regulator gene cpcA of filamentous fungus Aspergillus nidulans. Mol. Biol. Cell 12:2846-2857.
-
(2001)
Mol. Biol. Cell
, vol.12
, pp. 2846-2857
-
-
Hoffmann, B.1
Valerius, O.2
Andermann, M.3
Braus, G.H.4
-
41
-
-
0034871847
-
Induction of jlbA mRNA synthesis for a putative bZIP protein of Aspergillus nidulans by amino acid starvation
-
Strittmatter AW, Irniger S, Braus GH. 2001. Induction of jlbA mRNA synthesis for a putative bZIP protein of Aspergillus nidulans by amino acid starvation. Curr. Genet. 39:327-334.
-
(2001)
Curr. Genet.
, vol.39
, pp. 327-334
-
-
Strittmatter, A.W.1
Irniger, S.2
Braus, G.H.3
-
43
-
-
0022352946
-
Enzymes of gluconate metabolism and glycolysis in Penicillium notatum
-
Pitt D, Mosley MJ. 1985. Enzymes of gluconate metabolism and glycolysis in Penicillium notatum. Antonie Van Leeuwenhoek 51:353-364.
-
(1985)
Antonie Van Leeuwenhoek
, vol.51
, pp. 353-364
-
-
Pitt, D.1
Mosley, M.J.2
-
44
-
-
0022394684
-
Pathways of glucose catabolism and the origin and metabolism of pyruvate during calcium-induced conidiation of Penicillium notatum
-
Pitt D, Mosley MJ. 1985. Pathways of glucose catabolism and the origin and metabolism of pyruvate during calcium-induced conidiation of Penicillium notatum. Antonie Van Leeuwenhoek 51:365-384.
-
(1985)
Antonie Van Leeuwenhoek
, vol.51
, pp. 365-384
-
-
Pitt, D.1
Mosley, M.J.2
-
45
-
-
70149087945
-
Transcriptional profiling for Aspergillus nidulans HogA MAPK signaling pathway in response to fludioxonil and osmotic stress
-
Hagiwara D, Asano Y, Marui J, Yoshimi A, Mizuno T, Abe K. 2009. Transcriptional profiling for Aspergillus nidulans HogA MAPK signaling pathway in response to fludioxonil and osmotic stress. Fungal Genet. Biol. 46:868-878.
-
(2009)
Fungal Genet. Biol.
, vol.46
, pp. 868-878
-
-
Hagiwara, D.1
Asano, Y.2
Marui, J.3
Yoshimi, A.4
Mizuno, T.5
Abe, K.6
-
46
-
-
0034041677
-
A novel "two-component" protein containing histidine kinase and response regulator domains required for sporulation in Aspergillus nidulans
-
Virginia M, Appleyard CL, McPheat WL, Stark MJ. 2000. A novel "two-component" protein containing histidine kinase and response regulator domains required for sporulation in Aspergillus nidulans. Curr. Genet. 37:364-372.
-
(2000)
Curr. Genet.
, vol.37
, pp. 364-372
-
-
Virginia, M.1
Appleyard, C.L.2
McPheat, W.L.3
Stark, M.J.4
-
47
-
-
0035145679
-
Multiple catalase genes are differentially regulated in Aspergillus nidulans
-
Kawasaki L, Aguirre J. 2001. Multiple catalase genes are differentially regulated in Aspergillus nidulans. J. Bacteriol. 183:1434-1440.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 1434-1440
-
-
Kawasaki, L.1
Aguirre, J.2
-
48
-
-
77957946894
-
Fungi, hidden in soil or up in the air: Light makes a difference
-
Rodriguez-Romero J, Hedtke M, Kastner C, Müller S, Fischer R. 2010. Fungi, hidden in soil or up in the air: light makes a difference. Annu. Rev. Microbiol. 64:585-610.
-
(2010)
Annu. Rev. Microbiol.
, vol.64
, pp. 585-610
-
-
Rodriguez-Romero, J.1
Hedtke, M.2
Kastner, C.3
Müller, S.4
Fischer, R.5
-
49
-
-
34748844485
-
Response regulators SrrA and SskA are central components of a phosphorelay system involved in stress signal transduction and asexual sporulation in Aspergillus nidulans
-
Vargas-Pérez I, Sánchez O, Kawasaki L, Georgellis D, Aguirre J. 2007. Response regulators SrrA and SskA are central components of a phosphorelay system involved in stress signal transduction and asexual sporulation in Aspergillus nidulans. Eukaryot. Cell 6:1570-1583.
-
(2007)
Eukaryot. Cell
, vol.6
, pp. 1570-1583
-
-
Vargas-Pérez, I.1
Sánchez, O.2
Kawasaki, L.3
Georgellis, D.4
Aguirre, J.5
-
50
-
-
0031740084
-
Posttranscriptional control mediates cell type-specific localization of catalase A during Aspergillus nidulans development
-
Navarro RE, Aguirre J. 1998. Posttranscriptional control mediates cell type-specific localization of catalase A during Aspergillus nidulans development. J. Bacteriol. 180:5733-5738.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 5733-5738
-
-
Navarro, R.E.1
Aguirre, J.2
-
51
-
-
0029869234
-
catA, a new Aspergillus nidulans gene encoding a developmentally regulated catalase
-
Navarro RE, Stringer MA, Hansberg W, Timberlake WE, Aguirre J. 1996. catA, a new Aspergillus nidulans gene encoding a developmentally regulated catalase. Curr. Genet. 29:352-359.
-
(1996)
Curr. Genet.
, vol.29
, pp. 352-359
-
-
Navarro, R.E.1
Stringer, M.A.2
Hansberg, W.3
Timberlake, W.E.4
Aguirre, J.5
-
52
-
-
0036039173
-
SakA MAP kinase is involved in stress signal transduction, sexual development and spore viability in Aspergillus nidulans
-
Kawasaki L, Sánchez O, Shiozaki K, Aguirre J. 2002. SakA MAP kinase is involved in stress signal transduction, sexual development and spore viability in Aspergillus nidulans. Mol. Microbiol. 45:1153-1163.
-
(2002)
Mol. Microbiol.
, vol.45
, pp. 1153-1163
-
-
Kawasaki, L.1
Sánchez, O.2
Shiozaki, K.3
Aguirre, J.4
-
53
-
-
79953907257
-
Aspergillus nidulans transcription factor AtfA interacts with the MAPK SakA to regulate general stress responses, development and spore functions
-
Lara-Rojas F, Sánchez O, Kawasaki L, Aguirre J. 2011. Aspergillus nidulans transcription factor AtfA interacts with the MAPK SakA to regulate general stress responses, development and spore functions. Mol. Microbiol. 80:436-454.
-
(2011)
Mol. Microbiol.
, vol.80
, pp. 436-454
-
-
Lara-Rojas, F.1
Sánchez, O.2
Kawasaki, L.3
Aguirre, J.4
-
54
-
-
0025343158
-
Conidium differentiation in Aspergillus nidulans wild-type and wet-white (wetA) mutant strains
-
Sewall TC, Mims CW, Timberlake WE. 1990. Conidium differentiation in Aspergillus nidulans wild-type and wet-white (wetA) mutant strains. Dev. Biol. 138:499-508.
-
(1990)
Dev. Biol.
, vol.138
, pp. 499-508
-
-
Sewall, T.C.1
Mims, C.W.2
Timberlake, W.E.3
-
55
-
-
67649846425
-
Comprehensive genomic analysis of cell wall genes in Aspergillus nidulans
-
de Groot PWJ, Brandt BW, Horiuchi H, Ram AFJ, de Koster CG, Klis FM. 2009. Comprehensive genomic analysis of cell wall genes in Aspergillus nidulans. Fungal Genet. Biol. 46(Suppl 1):S72-S81.
-
(2009)
Fungal Genet. Biol.
, vol.46
, Issue.SUPPL. 1
-
-
de Groot, P.W.J.1
Brandt, B.W.2
Horiuchi, H.3
Ram, A.F.J.4
de Koster, C.G.5
Klis, F.M.6
-
56
-
-
21344467963
-
Three putative oxylipin biosynthetic genes integrate sexual and asexual development in Aspergillus nidulans
-
Tsitsigiannis DI, Kowieski TM, Zarnowski R, Keller NP. 2005. Three putative oxylipin biosynthetic genes integrate sexual and asexual development in Aspergillus nidulans. Microbiology 151:1809-1821.
-
(2005)
Microbiology
, vol.151
, pp. 1809-1821
-
-
Tsitsigiannis, D.I.1
Kowieski, T.M.2
Zarnowski, R.3
Keller, N.P.4
-
58
-
-
44649167604
-
The VeA regulatory system and its role in morphological and chemical development in fungi
-
Calvo AM. 2008. The VeA regulatory system and its role in morphological and chemical development in fungi. Fungal Genet. Biol. 45:1053-1061.
-
(2008)
Fungal Genet. Biol.
, vol.45
, pp. 1053-1061
-
-
Calvo, A.M.1
-
59
-
-
70349328051
-
The nsdC gene encoding a putative C2H2-type transcription factor is a key activator of sexual development in Aspergillus nidulans
-
Kim H-R, Chae K-S, Han K-H, Han D-M. 2009. The nsdC gene encoding a putative C2H2-type transcription factor is a key activator of sexual development in Aspergillus nidulans. Genetics 182:771-783.
-
(2009)
Genetics
, vol.182
, pp. 771-783
-
-
Kim, H.-R.1
Chae, K.-S.2
Han, K.-H.3
Han, D.-M.4
-
60
-
-
15544369662
-
The Zn(II)2Cys6 putative Aspergillus nidulans transcription factor repressor of sexual development inhibits sexual development under low-carbon conditions and in submersed culture
-
Vienken K, Scherer M, Fischer R. 2005. The Zn(II)2Cys6 putative Aspergillus nidulans transcription factor repressor of sexual development inhibits sexual development under low-carbon conditions and in submersed culture. Genetics 169:619-630.
-
(2005)
Genetics
, vol.169
, pp. 619-630
-
-
Vienken, K.1
Scherer, M.2
Fischer, R.3
-
61
-
-
0023404245
-
Isolation and physical characterization of three essential conidiation genes from Aspergillus nidulans
-
Boylan MT, Mirabito PM, Willett CE, Zimmerman CR, Timberlake WE. 1987. Isolation and physical characterization of three essential conidiation genes from Aspergillus nidulans. Mol. Cell. Biol. 7:3113-3118.
-
(1987)
Mol. Cell. Biol.
, vol.7
, pp. 3113-3118
-
-
Boylan, M.T.1
Mirabito, P.M.2
Willett, C.E.3
Zimmerman, C.R.4
Timberlake, W.E.5
-
62
-
-
41549112943
-
A novel regulator couples sporogenesis and trehalose biogenesis in Aspergillus nidulans
-
doi:10.1371/journal.pone.0000970
-
Ni M, Yu J-H. 2007. A novel regulator couples sporogenesis and trehalose biogenesis in Aspergillus nidulans. PLoS One 2:e970. doi:10.1371/journal.pone.0000970.
-
(2007)
PLoS One
, vol.2
-
-
Ni, M.1
Yu, J.-H.2
-
63
-
-
0024615497
-
Molecular characterization of the Aspergillus nidulans yA locus
-
O'Hara EB, Timberlake WE. 1989. Molecular characterization of the Aspergillus nidulans yA locus. Genetics 121:249-254.
-
(1989)
Genetics
, vol.121
, pp. 249-254
-
-
O'Hara, E.B.1
Timberlake, W.E.2
-
64
-
-
0242269023
-
Characterization of phiA, a gene essential for phialide development in Aspergillus nidulans
-
Melin P, Schnürer J, Wagner EGH. 2003. Characterization of phiA, a gene essential for phialide development in Aspergillus nidulans. Fungal Genet. Biol. 40:234-241.
-
(2003)
Fungal Genet. Biol.
, vol.40
, pp. 234-241
-
-
Melin, P.1
Schnürer, J.2
Wagner, E.G.H.3
-
65
-
-
0025875745
-
Rodletless, a new Aspergillus developmental mutant induced by directed gene inactivation
-
Stringer MA, Dean RA, Sewall TC, Timberlake WE. 1991. Rodletless, a new Aspergillus developmental mutant induced by directed gene inactivation. Genes Dev. 5:1161-1171.
-
(1991)
Genes Dev.
, vol.5
, pp. 1161-1171
-
-
Stringer, M.A.1
Dean, R.A.2
Sewall, T.C.3
Timberlake, W.E.4
-
66
-
-
0026034914
-
Isolation and developmentally regulated expression of an Aspergillus nidulans phenol oxidase-encoding gene, ivoB
-
Birse CE, Clutterbuck AJ. 1991. Isolation and developmentally regulated expression of an Aspergillus nidulans phenol oxidase-encoding gene, ivoB. Gene 98:69-76.
-
(1991)
Gene
, vol.98
, pp. 69-76
-
-
Birse, C.E.1
Clutterbuck, A.J.2
-
67
-
-
0025063226
-
The genetics of conidiophore pigmentation in Aspergillus nidulans
-
Clutterbuck AJ. 1990. The genetics of conidiophore pigmentation in Aspergillus nidulans. J. Gen. Microbiol. 136:1731-1738.
-
(1990)
J. Gen. Microbiol.
, vol.136
, pp. 1731-1738
-
-
Clutterbuck, A.J.1
-
68
-
-
77956134073
-
FlbC is a putative nuclear C2H2 transcription factor regulating development in Aspergillus nidulans
-
Kwon N-J, Garzia A, Espeso EA, Ugalde U, Yu J-H. 2010. FlbC is a putative nuclear C2H2 transcription factor regulating development in Aspergillus nidulans. Mol. Microbiol. 77:1203-1219.
-
(2010)
Mol. Microbiol.
, vol.77
, pp. 1203-1219
-
-
Kwon, N.-J.1
Garzia, A.2
Espeso, E.A.3
Ugalde, U.4
Yu, J.-H.5
-
69
-
-
23744432458
-
The fluGBrlA pathway contributes to the initialisation of autolysis in submerged Aspergillus nidulans cultures
-
Emri T, Molnár Z, Pusztahelyi T, Varecza Z, Pócsi I. 2005. The fluGBrlA pathway contributes to the initialisation of autolysis in submerged Aspergillus nidulans cultures. Mycol. Res. 109:757-763.
-
(2005)
Mycol. Res.
, vol.109
, pp. 757-763
-
-
Emri, T.1
Molnár, Z.2
Pusztahelyi, T.3
Varecza, Z.4
Pócsi, I.5
-
71
-
-
0014584501
-
Changes in activity of certain enzymes of the tricarboxylic acid cycle and the glyoxylate cycle during the initiation of conidiation of Aspergillus niger
-
Galbraith JC, Smith JE. 1969. Changes in activity of certain enzymes of the tricarboxylic acid cycle and the glyoxylate cycle during the initiation of conidiation of Aspergillus niger. Can. J. Microbiol. 15:1207-1212.
-
(1969)
Can. J. Microbiol.
, vol.15
, pp. 1207-1212
-
-
Galbraith, J.C.1
Smith, J.E.2
-
72
-
-
0014601269
-
The glyoxylate cycle as an important pathway in fungal morphogenesis
-
Galbraith JC, Smith JE. 1969. The glyoxylate cycle as an important pathway in fungal morphogenesis. J. Gen. Microbiol. 58:12-13.
-
(1969)
J. Gen. Microbiol.
, vol.58
, pp. 12-13
-
-
Galbraith, J.C.1
Smith, J.E.2
-
74
-
-
84862060902
-
Illuminating the diversity of aromatic polyketide synthases in Aspergillus nidulans
-
Ahuja M, Chiang Y-M, Chang S-L, Praseuth MB, Entwistle R, Sanchez JF, Lo H-C, Yeh H-H, Oakley BR, Wang CCC. 2012. Illuminating the diversity of aromatic polyketide synthases in Aspergillus nidulans. J. Am. Chem. Soc. 134:8212-8221.
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 8212-8221
-
-
Ahuja, M.1
Chiang, Y.-M.2
Chang, S.-L.3
Praseuth, M.B.4
Entwistle, R.5
Sanchez, J.F.6
Lo, H.-C.7
Yeh, H.-H.8
Oakley, B.R.9
Wang, C.C.C.10
-
75
-
-
84861209852
-
Genetic, molecular, and biochemical basis of fungal tropolone biosynthesis
-
Davison J, al Fahad A, Cai M, Song Z, Yehia SY, Lazarus CM, Bailey AM, Simpson TJ, Cox RJ. 2012. Genetic, molecular, and biochemical basis of fungal tropolone biosynthesis. Proc. Natl. Acad. Sci. U. S. A. 109: 7642-7647.
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
, pp. 7642-7647
-
-
Davison, J.1
al Fahad, A.2
Cai, M.3
Song, Z.4
Yehia, S.Y.5
Lazarus, C.M.6
Bailey, A.M.7
Simpson, T.J.8
Cox, R.J.9
-
76
-
-
84864097219
-
Genome-based cluster deletion reveals an endocrocin biosynthetic pathway in Aspergillus fumigatus
-
Lim FY, Hou Y, Chen Y, Oh JH, Lee I, Bugni TS, Keller NP. 2012. Genome-based cluster deletion reveals an endocrocin biosynthetic pathway in Aspergillus fumigatus. Appl. Environ. Microbiol. 78:4117-4125.
-
(2012)
Appl. Environ. Microbiol.
, vol.78
, pp. 4117-4125
-
-
Lim, F.Y.1
Hou, Y.2
Chen, Y.3
Oh, J.H.4
Lee, I.5
Bugni, T.S.6
Keller, N.P.7
-
77
-
-
4143090400
-
LaeA, a regulator of secondary metabolism in Aspergillus spp
-
Bok JW, Keller NP. 2004. LaeA, a regulator of secondary metabolism in Aspergillus spp. Eukaryot. Cell 3:527-535.
-
(2004)
Eukaryot. Cell
, vol.3
, pp. 527-535
-
-
Bok, J.W.1
Keller, N.P.2
-
78
-
-
79955132364
-
8-Carbon oxylipins inhibit germination and growth, and stimulate aerial conidiation in Aspergillus nidulans
-
Herrero-García E, Garzia A, Cordobés S, Espeso EA, Ugalde U. 2011. 8-Carbon oxylipins inhibit germination and growth, and stimulate aerial conidiation in Aspergillus nidulans. Fungal Biol. 115:393-400.
-
(2011)
Fungal Biol.
, vol.115
, pp. 393-400
-
-
Herrero-García, E.1
Garzia, A.2
Cordobés, S.3
Espeso, E.A.4
Ugalde, U.5
-
80
-
-
70350239318
-
Autoregulatory signals in mycelial fungi
-
In Kües U, Fischer R (ed), Springer, Berlin, Germany
-
Ugalde U. 2006. Autoregulatory signals in mycelial fungi, p 203-214. In Kües U, Fischer R (ed), Growth, differentiation and sexuality: the Mycota, vol 1. Springer, Berlin, Germany.
-
(2006)
Growth, differentiation and sexuality: The Mycota
, vol.1
, pp. 203-214
-
-
Ugalde, U.1
-
81
-
-
84858667719
-
Signaling the induction of sporulation involves the interaction of two secondary metabolites in Aspergillus nidulans
-
Rodríguez-Urra AB, Jimenez C, Nieto MI, Rodríguez J, Hayashi H, Ugalde U. 2012. Signaling the induction of sporulation involves the interaction of two secondary metabolites in Aspergillus nidulans. ACS Chem. Biol. 7:599-606.
-
(2012)
ACS Chem. Biol.
, vol.7
, pp. 599-606
-
-
Rodríguez-Urra, A.B.1
Jimenez, C.2
Nieto, M.I.3
Rodríguez, J.4
Hayashi, H.5
Ugalde, U.6
-
82
-
-
33645066899
-
TmpA, a member of a novel family of putative membrane flavoproteins, regulates asexual development in Aspergillus nidulans
-
Soid-Raggi G, Sánchez O, Aguirre J. 2006. TmpA, a member of a novel family of putative membrane flavoproteins, regulates asexual development in Aspergillus nidulans. Mol. Microbiol. 59:854-869.
-
(2006)
Mol. Microbiol.
, vol.59
, pp. 854-869
-
-
Soid-Raggi, G.1
Sánchez, O.2
Aguirre, J.3
-
83
-
-
84859589437
-
Identification and characterization of a novel diterpene gene cluster in Aspergillus nidulans
-
doi:10.1371/journal.pone.0035450
-
Bromann K, Toivari M, Viljanen K, Vuoristo A, Ruohonen L, Nakari-Setälä T. 2012. Identification and characterization of a novel diterpene gene cluster in Aspergillus nidulans. PLoS One 7:e35450. doi:10.1371/journal.pone.0035450.
-
(2012)
PLoS One
, vol.7
-
-
Bromann, K.1
Toivari, M.2
Viljanen, K.3
Vuoristo, A.4
Ruohonen, L.5
Nakari-Setälä, T.6
-
84
-
-
63849314526
-
A survey of nonribosomal peptide synthetase (NRPS) genes in Aspergillus nidulans
-
von Döhren, H. 2009. A survey of nonribosomal peptide synthetase (NRPS) genes in Aspergillus nidulans. Fungal Genet. Biol. 46:S45-S52.
-
(2009)
Fungal Genet. Biol.
, vol.46
-
-
von Döhren, H.1
-
85
-
-
79960359850
-
A genome-wide polyketide synthase deletion library uncovers novel genetic links to polyketides and meroterpenoids in Aspergillus nidulans
-
Nielsen ML, Nielsen JB, Rank C, Klejnstrup ML, Holm DMK, Brogaard KH, Hansen BG, Frisvad JC, Larsen TO, Mortensen UH. 2011. A genome-wide polyketide synthase deletion library uncovers novel genetic links to polyketides and meroterpenoids in Aspergillus nidulans. FEMS Microbiol. Lett. 321:157-166.
-
(2011)
FEMS Microbiol. Lett.
, vol.321
, pp. 157-166
-
-
Nielsen, M.L.1
Nielsen, J.B.2
Rank, C.3
Klejnstrup, M.L.4
Holm, D.M.K.5
Brogaard, K.H.6
Hansen, B.G.7
Frisvad, J.C.8
Larsen, T.O.9
Mortensen, U.H.10
-
86
-
-
33947308882
-
Genomics-driven discovery of PKS-NRPS hybrid metabolites from Aspergillus nidulans
-
Bergmann S, Schümann J, Scherlach K, Lange C, Brakhage AA, Hertweck C. 2007. Genomics-driven discovery of PKS-NRPS hybrid metabolites from Aspergillus nidulans. Nat. Chem. Biol. 3:213-217.
-
(2007)
Nat. Chem. Biol.
, vol.3
, pp. 213-217
-
-
Bergmann, S.1
Schümann, J.2
Scherlach, K.3
Lange, C.4
Brakhage, A.A.5
Hertweck, C.6
-
87
-
-
33846478803
-
Differential expression of genes involved in iron metabolism in Aspergillus fumigatus
-
Power T, Ortoneda M, Morrissey JP, Dobson ADW. 2006. Differential expression of genes involved in iron metabolism in Aspergillus fumigatus. Int. Microbiol. 9:281-287.
-
(2006)
Int. Microbiol.
, vol.9
, pp. 281-287
-
-
Power, T.1
Ortoneda, M.2
Morrissey, J.P.3
Dobson, A.D.W.4
-
88
-
-
77955274600
-
SMURF: Genomic mapping of fungal secondary metabolite clusters
-
Khaldi N, Seifuddin FT, Turner G, Haft D, Nierman WC, Wolfe KH, Fedorova ND. 2010. SMURF: Genomic mapping of fungal secondary metabolite clusters. Fungal Genet. Biol. 47:736-741.
-
(2010)
Fungal Genet. Biol.
, vol.47
, pp. 736-741
-
-
Khaldi, N.1
Seifuddin, F.T.2
Turner, G.3
Haft, D.4
Nierman, W.C.5
Wolfe, K.H.6
Fedorova, N.D.7
-
89
-
-
84862599581
-
Endophytic insect-parasitic fungi translocate nitrogen directly from insects to plants
-
Behie SW, Zelisko PM, Bidochka MJ. 2012. Endophytic insect-parasitic fungi translocate nitrogen directly from insects to plants. Science 336: 1576-1577.
-
(2012)
Science
, vol.336
, pp. 1576-1577
-
-
Behie, S.W.1
Zelisko, P.M.2
Bidochka, M.J.3
-
90
-
-
78149308102
-
HapX-mediated adaption to iron starvation is crucial for virulence of Aspergillus fumigatus
-
doi:10.1371/journal.ppat.1001124
-
Schrettl M, Beckmann N, Varga J, Heinekamp T, Jacobsen ID, Jöchl C, Moussa TA, Wang S, Gsaller F, Blatzer M, Werner ER, Niermann WC, Brakhage AA, Haas H. 2010. HapX-mediated adaption to iron starvation is crucial for virulence of Aspergillus fumigatus. PLoS Pathog. 6:e1001124. doi:10.1371/journal.ppat.1001124.
-
(2010)
PLoS Pathog.
, vol.6
-
-
Schrettl, M.1
Beckmann, N.2
Varga, J.3
Heinekamp, T.4
Jacobsen, I.D.5
Jöchl, C.6
Moussa, T.A.7
Wang, S.8
Gsaller, F.9
Blatzer, M.10
Werner, E.R.11
Niermann, W.C.12
Brakhage, A.A.13
Haas, H.14
|