Effect of two imidazolium derivatives of ionic liquids on the structure and activity of adenosine deaminase

International Journal of Biological Macromolecules

Volumn 55, Issue , 2013, Pages 47-61

  Ajloo, Davood ^a   Sangian, Masoomeh ^a   Ghadamgahi, Maryam ^a   Evini, Mina ^b   Saboury, Ali Akbar ^b  

^a DAMGHAN UNIVERSITY   (Iran)

^b UNIVERSITY OF TEHRAN   (Iran)

Author keywords

Adenosine deaminase; Docking; Hydrogen bond; Ionic liquid; Molecular dynamics simulation; Tertiary structure

Indexed keywords

1 ALLYL 3 METHYL IMIDAZOLIUM; 1 OCTHYL 3 METHYL IMIDAZOLIUM; ADENOSINE DEAMINASE; IMIDAZOLE DERIVATIVE; IONIC LIQUID; PHOSPHATE BUFFERED SALINE; UNCLASSIFIED DRUG;

ARTICLE; CONTROLLED STUDY; DRUG EFFECT; DRUG STRUCTURE; ENZYME ACTIVITY; ENZYME CONFORMATION; FLUORESCENCE ANALYSIS; HYDROGEN BOND; HYDROPHILICITY; HYDROPHOBICITY; MOLECULAR DOCKING; MOLECULAR DYNAMICS; PROTEIN INTERACTION; SIMULATION; STRUCTURE ACTIVITY RELATION; ULTRAVIOLET SPECTROPHOTOMETRY;

EID: 84872975854     PISSN: 01418130     EISSN: 18790003     Source Type: Journal    
DOI: 10.1016/j.ijbiomac.2012.12.042     Document Type: Article

References (42)

1. Ionic Liquids in Synthesis 2003, Wiley-VCH, Weinheim. P. Wasserscheid, T. Welton (Eds.).
2. Ionic Liquids: Industrial Applications for Green Chemistry, ACS Symposium Series 818 2002, American Chemical Society, Washington, DC. R.D. Rogers, K.R. Seddon (Eds.).
3. Welton T. Chemical Reviews 1999, 99:2071-2084.
4. Earle M.J., Esperanca J.M.S.S., Gilea M.A., Lopes J.N.C., Rebelo L.P.N., Magee J.W., Seddon K.R., Widegren J.A. Nature 2006, 439:831-834.
5. Anderson J.L., Ding J., Welton T., Armstrong D.W. Journal of the American Chemical Society 2002, 124:14247-14254.
6. Kosmulski M., Gustafsson J., Rosenholm J.B. Thermochimica Acta 2004, 412:47-53.
7. Visser A.E., Swatloski R.P., Griffin S.T., Hartman D.H., Rogers R.D. Separation Science 2001, 36:785-804.
8. Muzart J. Advanced Synthesis and Catalysis 2006, 348:275-295.
9. Parvulescu V.I., Hardacre C. Chemical Reviews 2007, 107:2615-2665.
10. Zhou Y. Current Nanoscience 2005, 1:33-40.
11. Anderson J.L., Armstrong D.W. Analytical Chemistry 2005, 77:6453-6462.
12. Antonietti M., Kuang D., Smarsly B., Zhou Y. Angewandte Chemie International Edition 2004, 43:4988-4992.
13. Cull S.G., Holbrey J.D., Vargas-Mora V., Seddon K.R., Lye G.J. Biotechnology and Bioengineering 2000, 69:227-233.
14. Kragl U., Eckstein M., Kaftzik N. Current Opinion in Biotechnology 2002, 13:565-571.
15. Park S., Kazlauskas R.J. Current Opinion in Biotechnology 2003, 14:432-437.
16. van Rantwijk F., Lau R.M., Sheldon R.A. Trends in Biotechnology 2003, 21:131-138.
17. Yang Z., Pan W. Enzyme and Microbial Technology 2005, 37:19-28.
18. Moon Y.H., Lee S.M., Ha S.H., Koo Y.M. Korean Journal of Chemical Engineering 2006, 23:247-263.
19. Sureshkumar M., Lee C.K. Journal of Molecular Catalysis B: Enzymatic 2009, 60:1-12.
20. van Rantwijk F., Sheldon R.A. Chemical Reviews 2007, 107:2757-2785.
21. Niu W., Shu Q., Chen Z., Mathews S., Di Cera E., Frieden C. Journal of Physical Chemistry B 2010, 114:16156-16165.
22. Moniruzzaman M., Nakashima K., Kamiya N., Goto M. Biochemical Engineering Journal 2010, 48:295-314.
23. Spencer N., Hopkinson D., Harris H. Annals of Human Genetics 1968, 32:9-14.
24. Doddona P.E., Schewach D.S., Kelly E.N., Argos P., Markham A.F., Orkin S.H.J. Journal of Biological Chemistry 1984, 259:25912101.
25. Chang Z., Nygaard P., Chinualt A.C., Kellems R.E. Biochemistry 1991, 30:2273-2280.
26. Farber G., Petsko G. Trends in Biochemical Sciences 1990, 15:228.
27. The Metabolic and Molecular Basis of Inherited Disease 1995, McGraw-Hill, New York. 17th ed. M. Hershfield, B. Mitchell, C.R. Scriver, A.L. Beaudet, W. Sly, D. Valle (Eds.).
28. Van der Weyden M., Kelley W.J. Biological Chemistry 1976, 257:5448.
29. Baghanha M.F., Pego A., Lima M.A. Chest 1990, 87:605.
30. Hovi T., Smyth J.F., Allison A.C., Williams S.C. Clinical and Experimental Immunology 1976, 23:395.
31. Sullivan J.L., Oxborne Wedgewood R.J. British Journal of Haematology 1977, 37:157.
32. Erbeldinger M., Mesiano A.J., Russel A.J. Biotechnology Progress 2000, 16:1129-1131.
33. Swatloski R.P., Spear S.K., Holbrey J.D., Rogers R.D. Journal of the American Chemical Society 2002, 124:4974-4975.
34. Dabirmanesh B., Daneshjou S., Akhavan Sepahi A., Ranjbar B., Khavari-Nejad R.A., Gill P., Heydari A., Khajeh K. International Journal of Biological Macromolecules 2011, 48:93-97.
35. Cleland W.W. The Enzymes 1970, vol. 2:1-65. Academic Press, New York. 3rd ed.
36. Sandler M., Smith H.J. Design of Enzyme Inhibitors as Drugs 1989, 1-18. Oxford University Press, Oxford. M. Sandler, H.J. Smith (Eds.).
37. Saboury A.A., Alijanianzadeh M., Mansoori- Torshizi H. Acta Biochimica Polonica 2007, 54:183.
38. Saboury A.A. Journal of the Iranian Chemical Society 2009, 6:219-229.
39. Kaplan N.O. Journal of Methods in Enzymology 1955, 2:473-480.
40. http://manual.gromacs.org/.
41. Darden T., York D., Pedersen L. Journal of Chemical Physics 1993, 98:10089-10092.
42. Dayer M.R., Moosavi-Movahedi A.A., Norouzi H., Ghourchiain P., Safarian S. Journal of Biochemistry and Molecular Biology 2002, 35:364-370.