메뉴 건너뛰기




Volumn 14, Issue 1, 2013, Pages 215-222

Estimating divergence time for two evolutionarily significant units of a protected fish species

Author keywords

Conservation units; Cyprinodon tularosa; ESU; Molecular divergence; White Sands pupfish

Indexed keywords

BAYESIAN ANALYSIS; BIODIVERSITY; CONSERVATION GENETICS; CYPRINID; DATA SET; DIVERGENCE; ESTIMATION METHOD; EVOLUTIONARY BIOLOGY; HOLOCENE; MOLECULAR ANALYSIS; NINETEENTH CENTURY; TWENTIETH CENTURY;

EID: 84872831266     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-013-0447-1     Document Type: Article
Times cited : (18)

References (56)
  • 1
    • 58149282899 scopus 로고    scopus 로고
    • Joint determination of topology, divergence time and immigration in population trees
    • S. Matsumura, P. Forster, and C. Renfrew (Eds.), Cambridge: McDonald Institute for Archeological Research
    • Beaumont M (2008) Joint determination of topology, divergence time and immigration in population trees. In: Matsumura S, Forster P, Renfrew C (eds) Simulations, genetics and human prehistory. McDonald Institute for Archeological Research, Cambridge, pp 135-154.
    • (2008) Simulations, Genetics and Human Prehistory , pp. 135-154
    • Beaumont, M.1
  • 2
    • 77954247262 scopus 로고    scopus 로고
    • ABC as a flexible framework to estimate demography over space and time: some cons, many pros
    • Bertorelle G, Benazzo A, Mona S (2010) ABC as a flexible framework to estimate demography over space and time: some cons, many pros. Mol Ecol 19: 2609-2625.
    • (2010) Mol Ecol , vol.19 , pp. 2609-2625
    • Bertorelle, G.1    Benazzo, A.2    Mona, S.3
  • 3
    • 0026306543 scopus 로고
    • The ecology and conservation of the coelacanth Latimeria chalumnae
    • Bruton MN, Stobbs RE (1991) The ecology and conservation of the coelacanth Latimeria chalumnae. Environ Biol Fish 32: 313-339.
    • (1991) Environ Biol Fish , vol.32 , pp. 313-339
    • Bruton, M.N.1    Stobbs, R.E.2
  • 4
    • 4344627735 scopus 로고    scopus 로고
    • Experimental evidence for costs of parasitism for a threatened species, White Sands pupfish
    • Collyer ML, Stockwell CA (2004) Experimental evidence for costs of parasitism for a threatened species, White Sands pupfish. J Anim Ecol 73: 821-830.
    • (2004) J Anim Ecol , vol.73 , pp. 821-830
    • Collyer, M.L.1    Stockwell, C.A.2
  • 5
    • 14544295508 scopus 로고    scopus 로고
    • Morphological divergence of native and recently established populations of White Sands pupfish (Cyprinodon tularosa)
    • Collyer ML, Novak JM, Stockwell CA (2005) Morphological divergence of native and recently established populations of White Sands pupfish (Cyprinodon tularosa). Copeia 2005: 1-11.
    • (2005) Copeia , vol.2005 , pp. 1-11
    • Collyer, M.L.1    Novak, J.M.2    Stockwell, C.A.3
  • 6
    • 80052319939 scopus 로고    scopus 로고
    • Contemporary evolutionary divergence for a protected species following assisted colonization
    • doi:10.1371/journal.pone.0022310
    • Collyer ML, Heilveil JS, Stockwell CA (2011) Contemporary evolutionary divergence for a protected species following assisted colonization. PLoS ONE 6(8): e22310. doi: 10. 1371/journal. pone. 0022310.
    • (2011) PLoS ONE , vol.6 , Issue.8
    • Collyer, M.L.1    Heilveil, J.S.2    Stockwell, C.A.3
  • 11
    • 0032724862 scopus 로고    scopus 로고
    • 36Cl-determined age of the Carrizozo lava flows, south-central New Mexico
    • 36Cl-determined age of the Carrizozo lava flows, south-central New Mexico. New Mexico Geol 21: 25-29.
    • (1999) New Mexico Geol , vol.21 , pp. 25-29
    • Dunbar, N.W.1
  • 12
    • 0031597287 scopus 로고    scopus 로고
    • Evolutionary genetics of death valley pupfish populations: mitochondrial DNA sequence variation and population structure
    • Duvernell DD, Turner BJ (1998) Evolutionary genetics of death valley pupfish populations: mitochondrial DNA sequence variation and population structure. Mol Ecol 7: 279-288.
    • (1998) Mol Ecol , vol.7 , pp. 279-288
    • Duvernell, D.D.1    Turner, B.J.2
  • 13
    • 0036718239 scopus 로고    scopus 로고
    • Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis
    • Estoup A, Jarne P (2002) Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis. Mol Ecol 11(9): 1591-1604.
    • (2002) Mol Ecol , vol.11 , Issue.9 , pp. 1591-1604
    • Estoup, A.1    Jarne, P.2
  • 14
    • 5344241252 scopus 로고    scopus 로고
    • Genetic analysis of complex demographic scenarios: spatially expanding populations of the cane toad, Bufo marinus
    • Estoup A, Beaumont M, Sennedot F, Moritz C, Cornuet J-M (2004) Genetic analysis of complex demographic scenarios: spatially expanding populations of the cane toad, Bufo marinus. Evolution 58: 2021-2036.
    • (2004) Evolution , vol.58 , pp. 2021-2036
    • Estoup, A.1    Beaumont, M.2    Sennedot, F.3    Moritz, C.4    Cornuet, J.-M.5
  • 15
    • 0035544509 scopus 로고    scopus 로고
    • Adaptive evolutionary conservation: towards a unified concept for defining conservation units
    • Fraser DJ, Bernatchez L (2001) Adaptive evolutionary conservation: towards a unified concept for defining conservation units. Mol Ecol 10: 2741-2752.
    • (2001) Mol Ecol , vol.10 , pp. 2741-2752
    • Fraser, D.J.1    Bernatchez, L.2
  • 16
    • 0035076168 scopus 로고    scopus 로고
    • Detection of reduction in population size using data from microsatellite loci
    • Garza JC, Williamson EG (2001) Detection of reduction in population size using data from microsatellite loci. Mol Ecol 10: 305-318.
    • (2001) Mol Ecol , vol.10 , pp. 305-318
    • Garza, J.C.1    Williamson, E.G.2
  • 17
    • 85007320774 scopus 로고
    • FSTAT (Version 1.2): a computer program to calculate F-statistics
    • Goudet J (1995) FSTAT (Version 1. 2): a computer program to calculate F-statistics. J Hered 86: 485-486.
    • (1995) J Hered , vol.86 , pp. 485-486
    • Goudet, J.1
  • 18
    • 34347222893 scopus 로고    scopus 로고
    • The gap between the concept and definitions in the evolutionarily significant unit: the need to integrate neutral genetic variation and adaptive variation
    • Guia APO, Saitoh T (2007) The gap between the concept and definitions in the evolutionarily significant unit: the need to integrate neutral genetic variation and adaptive variation. Ecol Res 22: 604-612.
    • (2007) Ecol Res , vol.22 , pp. 604-612
    • Guia, A.P.O.1    Saitoh, T.2
  • 19
    • 73349141378 scopus 로고    scopus 로고
    • Inferring introduction routes of invasive species using approximate Bayesian computation on microsatellite data
    • Guillemaud T, Beaumont MA, Ciosi M, Corneut J-M, Estoup A (2010) Inferring introduction routes of invasive species using approximate Bayesian computation on microsatellite data. Heredity 104: 88-99.
    • (2010) Heredity , vol.104 , pp. 88-99
    • Guillemaud, T.1    Beaumont, M.A.2    Ciosi, M.3    Corneut, J.-M.4    Estoup, A.5
  • 20
    • 33748915032 scopus 로고    scopus 로고
    • The endangered Sonoran topminnow: examination of species and ESUs using three mt-DNA genes
    • Hedrick PW, Lee RN, Curt CR (2006) The endangered Sonoran topminnow: examination of species and ESUs using three mt-DNA genes. Conserv Genet 7: 484-492.
    • (2006) Conserv Genet , vol.7 , pp. 484-492
    • Hedrick, P.W.1    Lee, R.N.2    Curt, C.R.3
  • 21
    • 0033427707 scopus 로고    scopus 로고
    • The pace of modern life: measuring rates of contemporary microevolution
    • Hendry AP, Kinnison MT (1999) The pace of modern life: measuring rates of contemporary microevolution. Evolution 53: 1637-1653.
    • (1999) Evolution , vol.53 , pp. 1637-1653
    • Hendry, A.P.1    Kinnison, M.T.2
  • 22
    • 0007955468 scopus 로고
    • The geology of the White Sands of New Mexico
    • Herrick CL (1900) The geology of the White Sands of New Mexico. J Geol 8: 112-128.
    • (1900) J Geol , vol.8 , pp. 112-128
    • Herrick, C.L.1
  • 23
    • 0035707845 scopus 로고    scopus 로고
    • The pace of modern life II: from rates of contemporary microevolution to pattern and process
    • Kinnison MT, Hendry AP (2001) The pace of modern life II: from rates of contemporary microevolution to pattern and process. Genetica 112-113: 145-164.
    • (2001) Genetica , vol.112-113 , pp. 145-164
    • Kinnison, M.T.1    Hendry, A.P.2
  • 24
    • 0036532087 scopus 로고    scopus 로고
    • Gene flow and the limits to natural selection
    • Lenormand T (2002) Gene flow and the limits to natural selection. Trends Ecol Evol 17: 183-189.
    • (2002) Trends Ecol Evol , vol.17 , pp. 183-189
    • Lenormand, T.1
  • 25
    • 0025066547 scopus 로고
    • Monophyletic origin of Lake Victoria cichlid fishes suggested by mitochondrial DNA sequences
    • Meyer A, Kocher TD, Basasibwaki P, Wilson AC (1990) Monophyletic origin of Lake Victoria cichlid fishes suggested by mitochondrial DNA sequences. Nature 347: 550-553.
    • (1990) Nature , vol.347 , pp. 550-553
    • Meyer, A.1    Kocher, T.D.2    Basasibwaki, P.3    Wilson, A.C.4
  • 27
    • 0003035280 scopus 로고
    • Coevolution of deserts and pupfishes (genus Cyprinodon) in the American southwest
    • R. J. Naiman and D. L. Soltz (Eds.), New York: Wiley
    • Miller RR (1981) Coevolution of deserts and pupfishes (genus Cyprinodon) in the American southwest. In: Naiman RJ, Soltz DL (eds) Fishes in North American deserts. Wiley, New York, pp 39-94.
    • (1981) Fishes in North American Deserts , pp. 39-94
    • Miller, R.R.1
  • 28
    • 0000227125 scopus 로고
    • Cyprinodon tularosa, a new Cyprinodontidae fish from the Tularosa Basin, New Mexico
    • Miller RR, Echelle AA (1975) Cyprinodon tularosa, a new Cyprinodontidae fish from the Tularosa Basin, New Mexico. Southwest Nat 19: 365-377.
    • (1975) Southwest Nat , vol.19 , pp. 365-377
    • Miller, R.R.1    Echelle, A.A.2
  • 30
    • 0028151986 scopus 로고
    • Defining 'evolutionarily significant units' for conservation
    • Moritz C (1994) Defining 'evolutionarily significant units' for conservation. Trends Ecol Evol 9: 373-375.
    • (1994) Trends Ecol Evol , vol.9 , pp. 373-375
    • Moritz, C.1
  • 33
    • 0002267691 scopus 로고
    • Phylogenetic relationships of mitochondrial DNA under various demographic models of speciation
    • E. Nevo and S. Karlin (Eds.), New York: Academic Press
    • Neigel JE, Avise JC (1986) Phylogenetic relationships of mitochondrial DNA under various demographic models of speciation. In: Nevo E, Karlin S (eds) Evolutionary processes and theory. Academic Press, New York, pp 515-534.
    • (1986) Evolutionary Processes and Theory , pp. 515-534
    • Neigel, J.E.1    Avise, J.C.2
  • 34
    • 34447650844 scopus 로고    scopus 로고
    • Introduction history of Drosophila subobscura in the New World: a microsatellite-based survey using ABC methods
    • Pascual M, Chapuis MP, Mestres F, Balanya J, Huey RB, Gilchrist GW, Serra L, Estoup A (2007) Introduction history of Drosophila subobscura in the New World: a microsatellite-based survey using ABC methods. Mol Ecol 16: 3069-3083.
    • (2007) Mol Ecol , vol.16 , pp. 3069-3083
    • Pascual, M.1    Chapuis, M.P.2    Mestres, F.3    Balanya, J.4    Huey, R.B.5    Gilchrist, G.W.6    Serra, L.7    Estoup, A.8
  • 35
    • 33644871292 scopus 로고    scopus 로고
    • Genalex 6: genetic analysis in excel. Population genetic software for teaching and research
    • Peakall R, Smouse PE (2006) Genalex 6: genetic analysis in excel. Population genetic software for teaching and research. Mol Ecol Notes 6: 288-295.
    • (2006) Mol Ecol Notes , vol.6 , pp. 288-295
    • Peakall, R.1    Smouse, P.E.2
  • 36
    • 0033054852 scopus 로고    scopus 로고
    • Native range and conservation of the White Sands pupfish (Cyprinodon tularosa)
    • Pittenger JS, Springer CL (1999) Native range and conservation of the White Sands pupfish (Cyprinodon tularosa). Southwest Nat 44: 157-165.
    • (1999) Southwest Nat , vol.44 , pp. 157-165
    • Pittenger, J.S.1    Springer, C.L.2
  • 38
    • 0000262278 scopus 로고
    • GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism
    • Raymond M, Rousset F (1995) GENEPOP (version 1. 2): population genetics software for exact tests and ecumenicism. J Hered 86: 248-249.
    • (1995) J Hered , vol.86 , pp. 248-249
    • Raymond, M.1    Rousset, F.2
  • 39
    • 0035707945 scopus 로고    scopus 로고
    • The population ecology of contemporary adaptations: what empirical studies reveal about the conditions that promote adaptive evolution
    • Reznick DN, Ghalambor CK (2001) The population ecology of contemporary adaptations: what empirical studies reveal about the conditions that promote adaptive evolution. Genetica 112-113: 183-198.
    • (2001) Genetica , vol.112-113 , pp. 183-198
    • Reznick, D.N.1    Ghalambor, C.K.2
  • 40
    • 0030617889 scopus 로고    scopus 로고
    • Evaluation of the rate of evolution in natural populations of guppies (Poecilia reticulata)
    • Reznick DN, Shaw FH, Rodd FH, Shaw RG (1997) Evaluation of the rate of evolution in natural populations of guppies (Poecilia reticulata). Science 275: 1934-1937.
    • (1997) Science , vol.275 , pp. 1934-1937
    • Reznick, D.N.1    Shaw, F.H.2    Rodd, F.H.3    Shaw, R.G.4
  • 41
    • 0000625869 scopus 로고
    • Analyzing tables of statistical tests
    • Rice WR (1989) Analyzing tables of statistical tests. Evolution 43: 223-225.
    • (1989) Evolution , vol.43 , pp. 223-225
    • Rice, W.R.1
  • 42
    • 79951745185 scopus 로고    scopus 로고
    • Connectivity in desert aquatic ecosystems: the devils hole story
    • In Sada DW, Sharpe SE (eds), Spring-fed wetlands: important scientific and cultural resources of the intermountain region, 2002 Accessed 11 June 2007
    • Riggs AC, Deacon JE (2004) Connectivity in desert aquatic ecosystems: the devils hole story. In Sada DW, Sharpe SE (eds) Conference proceedings. Spring-fed wetlands: important scientific and cultural resources of the intermountain region, 2002. Accessed 11 June 2007; www. wetlands. dri. edu/2002/RiggsDeacon. pdf.
    • (2004) Conference proceedings
    • Riggs, A.C.1    Deacon, J.E.2
  • 43
    • 29144511073 scopus 로고    scopus 로고
    • Parasites and salinity: costly tradeoffs in a threatened species
    • Rogowski D, Stockwell CA (2006) Parasites and salinity: costly tradeoffs in a threatened species. Oecologia 146: 615-622.
    • (2006) Oecologia , vol.146 , pp. 615-622
    • Rogowski, D.1    Stockwell, C.A.2
  • 44
    • 36849080837 scopus 로고    scopus 로고
    • Genepop'007: a complete re-implementation of the genepop software for Windows and Linux
    • doi:10.1111/j.1471-8286.2007.01931.x
    • Rousset F (2008) Genepop'007: a complete re-implementation of the genepop software for Windows and Linux. Mol Ecol Res 8: 103-106. doi: 10. 1111/j. 1471-8286. 2007. 01931. x.
    • (2008) Mol Ecol Res , vol.8 , pp. 103-106
    • Rousset, F.1
  • 47
    • 0032440264 scopus 로고    scopus 로고
    • Phosphogluconate dehydrogenase polymorphism and salinity in the White Sands pupfish
    • Stockwell CA, Mulvey M (1998) Phosphogluconate dehydrogenase polymorphism and salinity in the White Sands pupfish. Evolution 52: 1856-1860.
    • (1998) Evolution , vol.52 , pp. 1856-1860
    • Stockwell, C.A.1    Mulvey, M.2
  • 48
    • 0000681731 scopus 로고    scopus 로고
    • Genetic evidence for two evolutionarily significant units of White Sands pupfish
    • Stockwell CA, Mulvey M, Jones AG (1998) Genetic evidence for two evolutionarily significant units of White Sands pupfish. Anim Conserv 1: 213-225.
    • (1998) Anim Conserv , vol.1 , pp. 213-225
    • Stockwell, C.A.1    Mulvey, M.2    Jones, A.G.3
  • 50
    • 84871444352 scopus 로고    scopus 로고
    • Effects of salinity on Physa acuta, the intermediate host for the parasite Posthodiplostomum minimum; implications for the translocation of the protected White Sands pupfish
    • Stockwell CA, Purcell KM, Collyer ML, Janovy J (2011) Effects of salinity on Physa acuta, the intermediate host for the parasite Posthodiplostomum minimum; implications for the translocation of the protected White Sands pupfish. Trans Am Fish Soc 140: 1370-1374.
    • (2011) Trans Am Fish Soc , vol.140 , pp. 1370-1374
    • Stockwell, C.A.1    Purcell, K.M.2    Collyer, M.L.3    Janovy, J.4
  • 51
    • 0034833380 scopus 로고    scopus 로고
    • Effects of releasing maladapted individuals: a demographic-evolutionary model
    • Tufto J (2001) Effects of releasing maladapted individuals: a demographic-evolutionary model. Am Nat 158: 331-340.
    • (2001) Am Nat , vol.158 , pp. 331-340
    • Tufto, J.1
  • 52
    • 0026364289 scopus 로고
    • Pacific salmon, Oncorhynchus spp., and the definition of "species" under the endangered species act
    • Waples RS (1991) Pacific salmon, Oncorhynchus spp., and the definition of "species" under the endangered species act. Mar Fish Rev 53: 11-22.
    • (1991) Mar Fish Rev , vol.53 , pp. 11-22
    • Waples, R.S.1
  • 53
    • 0002643007 scopus 로고
    • Evolutionarily significant units and the conservation of biological diversity under the endangered species act
    • J. L. Nielsen (Ed.), Bethesda: American Fisheries Society
    • Waples RS (1995) Evolutionarily significant units and the conservation of biological diversity under the endangered species act. In: Nielsen JL (ed) Evolution and the aquatic ecosystem: Defining unique units in population conservation. American Fisheries Society, Bethesda, pp 8-27.
    • (1995) Evolution and the Aquatic Ecosystem: Defining Unique Units in Population Conservation , pp. 8-27
    • Waples, R.S.1
  • 54
    • 69149092643 scopus 로고    scopus 로고
    • Evolutionary history of Pacific salmon in dynamic environments
    • Waples RS, Pess GR, Beechie T (2008) Evolutionary history of Pacific salmon in dynamic environments. Evol App 1: 189-206.
    • (2008) Evol App , vol.1 , pp. 189-206
    • Waples, R.S.1    Pess, G.R.2    Beechie, T.3
  • 55
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir BS, Cockerham C (1984) Estimating F-statistics for the analysis of population structure. Evolution 38: 1358-1370.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.